PeakID (cmd=annotatePeaks.pl S22_S22_SEACR.relaxed.bed hg38 -annStats S22_S22_SEACR.relaxed.log)	Chr	Start	End	Strand	Peak Score	Focus Ratio/Region Size	Annotation	Detailed Annotation	Distance to TSS	Nearest PromoterID	Entrez ID	Nearest Unigene	Nearest Refseq	Nearest Ensembl	Gene Name	Gene Alias	Gene Description	Gene Type
76.9333	chr15	57975993	57976167	+	0.533333	NA	intron (NM_170696, intron 6 of 11)	intron (NM_170696, intron 6 of 11)	37943	NM_170697	8854	Hs.643455	NM_003888	ENSG00000128918	ALDH1A2	RALDH(II)|RALDH2|RALDH2-T	aldehyde dehydrogenase 1 family member A2	protein-coding
91.4667	chr8	106186325	106186617	+	0.533333	NA	Intergenic	Intergenic	-83707	NM_001198533	55074	Hs.127286	NM_018002	ENSG00000164830	OXR1	Nbla00307|TLDC3	oxidation resistance 1	protein-coding
57.7333-2	chr3	18668890	18669034	+	0.533333	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-223370	NM_001322874	6304	Hs.517717	NM_002971	ENSG00000182568	SATB1	-	SATB homeobox 1	protein-coding
117.433	chr10	99436512	99436783	+	0.533333	NA	Intergenic	Intergenic	-6023	NM_002079	2805	Hs.500756	NM_002079	ENSG00000120053	GOT1	AST1|ASTQTL1|GIG18|cAspAT|cCAT	glutamic-oxaloacetic transaminase 1	protein-coding
129.367	chr5	114405366	114405796	+	0.5	NA	intron (NM_021614, intron 3 of 7)	intron (NM_021614, intron 3 of 7)	-27930	NM_170775	3781	Hs.98280	NM_021614	ENSG00000080709	KCNN2	KCa2.2|SK2|SKCA2|SKCa 2|hSK2	potassium calcium-activated channel subfamily N member 2	protein-coding
72.8334	chr4	12674155	12674345	+	0.5	NA	Intergenic	Intergenic	450799	NR_125910	101929019	Hs.434234	NR_125910	ENSG00000251210	LINC02270	-	long intergenic non-protein coding RNA 2270	ncRNA
74.6667	chr4	61926123	61926375	+	0.5	NA	intron (NM_001322246, intron 12 of 25)	Tigger3c|DNA|TcMar-Tigger	235516	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
50.4667-2	chr17	43491266	43491441	+	0.466667	NA	intron (NR_136228, intron 4 of 23)	intron (NR_136228, intron 4 of 23)	7378	NR_136228	1659	Hs.463105	NM_004941	ENSG00000067596	DHX8	DDX8|Dhr2|HRH1|PRP22|PRPF22	DEAH-box helicase 8	protein-coding
72.5334	chr1	191549559	191549738	+	0.466667	NA	Intergenic	Intergenic	-321150	NR_146892	105371660	Hs.127094	NR_146892	ENSG00000233882	LINC01680	-	long intergenic non-protein coding RNA 1680	ncRNA
70.7334	chr16	49721965	49722235	+	0.466667	NA	intron (NM_001271620, intron 3 of 7)	intron (NM_001271620, intron 3 of 7)	-57776	NM_001330533	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding
61.9333	chr12	80918584	80918868	+	0.433333	NA	intron (NM_004664, intron 1 of 5)	intron (NM_004664, intron 1 of 5)	17107	NR_030349	693203		NR_030349	ENSG00000208022	MIR618	MIRN618|hsa-mir-618|mir-618	microRNA 618	ncRNA
86.2666	chr14	42687853	42688298	+	0.433333	NA	Intergenic	THE1C-int|LTR|ERVL-MaLR	1081219	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
64.2333-4	chr9	25793834	25794046	+	0.433333	NA	intron (NR_121604, intron 3 of 5)	intron (NR_121604, intron 3 of 5)	13884	NR_121604	101929582	Hs.140547	NR_121604	ENSG00000236306	LINC01241	-	long intergenic non-protein coding RNA 1241	ncRNA
111.733	chr2	66315483	66315845	+	0.433333	NA	Intergenic	L3|LINE|CR1	42664	NR_039938	100616464		NR_039938	ENSG00000264525	MIR4778	-	microRNA 4778	ncRNA
71.3	chr10	92471254	92471484	+	0.433333	NA	intron (NR_136399, intron 18 of 25)	intron (NR_136399, intron 18 of 25)	26392	NM_001322797	3416	Hs.500546	NM_004969	ENSG00000119912	IDE	INSULYSIN	insulin degrading enzyme	protein-coding
60.7666	chr14	95798839	95799058	+	0.433333	NA	Intergenic	MER58A|DNA|hAT-Charlie	-77444	NR_132399	100507043	Hs.455955	NR_038861	ENSG00000250366	TUNAR	HI-LNC78|LINC00617|TUNA	TCL1 upstream neural differentiation-associated RNA	ncRNA
87.3999	chr4	86010927	86011445	+	0.433333	NA	3' UTR (NM_001351624, exon 14 of 14)	3' UTR (NM_001351624, exon 14 of 14)	81170	NM_031305	83478	Hs.444229	NM_031305	ENSG00000138639	ARHGAP24	FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP	Rho GTPase activating protein 24	protein-coding
44.0666-4	chr3	36271254	36271435	+	0.433333	NA	Intergenic	Intergenic	-109143	NM_001292049	6769	Hs.56045	NM_003149	ENSG00000144681	STAC	STAC1	SH3 and cysteine rich domain	protein-coding
98.1	chr20	54873963	54874224	+	0.433333	NA	Intergenic	L1MB4|LINE|L1	398500	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
80.6	chr2	217019574	217020007	+	0.433333	NA	Intergenic	L1MC4a|LINE|L1	149018	NR_130782	101928327	Hs.350698	NR_130782	ENSG00000223874	LINC01921	-	long intergenic non-protein coding RNA 1921	ncRNA
85.7334	chr10	50390818	50391153	+	0.4	NA	intron (NM_147156, intron 6 of 10)	intron (NM_147156, intron 6 of 10)	-142375	NM_001143974	56624	Hs.512645	NM_019893	ENSG00000188611	ASAH2	BCDase|HNAC1|LCDase|N-CDase|NCDase	N-acylsphingosine amidohydrolase 2	protein-coding
56.5333	chr18	13354745	13355142	+	0.4	NA	intron (NM_181482, intron 2 of 5)	intron (NM_181482, intron 2 of 5)	72591	NR_040031	100288122	Hs.646264	NR_040031	ENSG00000267690	LDLRAD4-AS1	-	LDLRAD4 antisense RNA 1	ncRNA
59.2666-2	chr6	170181714	170181882	+	0.4	NA	Intergenic	L1MD|LINE|L1	21156	NR_125878	102724511	Hs.550045	NR_125878		LOC102724511	-	uncharacterized LOC102724511	ncRNA
40.4-6	chr5	121164967	121165141	+	0.4	NA	Intergenic	Intergenic	-157496	NR_104999	102467226		NR_104999		LOC102467226	-	uncharacterized LOC102467226	ncRNA
85.1667	chr2	209924879	209925144	+	0.4	NA	intron (NM_032504, intron 34 of 63)	L1M4|LINE|L1	-77554	NM_001318928	6120	Hs.282260	NM_006916	ENSG00000197713	RPE	RPE2-1	ribulose-5-phosphate-3-epimerase	protein-coding
51.8-4	chr8	123692328	123692623	+	0.4	NA	intron (NM_001003954, intron 9 of 11)	intron (NM_001003954, intron 9 of 11)	-38674	NM_001081675	340359	Hs.450252	NM_001081675	ENSG00000175946	KLHL38	C8ORFK36	kelch like family member 38	protein-coding
97.6	chr3	99379413	99379811	+	0.4	NA	Intergenic	Intergenic	-258982	NM_020351	1295	Hs.654548	NM_001850	ENSG00000144810	COL8A1	C3orf7	collagen type VIII alpha 1 chain	protein-coding
55.9-4	chr8	118679849	118680015	+	0.4	NA	intron (NR_038210, intron 3 of 4)	L1MC|LINE|L1	-57969	NM_001363274	401474	Hs.359393	NM_207506	ENSG00000177570	SAMD12	-	sterile alpha motif domain containing 12	protein-coding
86.6	chr10	54775168	54775582	+	0.4	NA	intron (NM_001354404, intron 4 of 34)	L1MA5A|LINE|L1	25856	NM_001354430	65217	Hs.280209	NM_033056	ENSG00000150275	PCDH15	CDHR15|DFNB23|USH1F	protocadherin related 15	protein-coding
126.8	chr10	120724142	120724768	+	0.4	NA	Intergenic	L1MC3|LINE|L1	126506	NR_103717	404216	Hs.196578	NM_001012711	ENSG00000177234	LINC01561	C10orf85	long intergenic non-protein coding RNA 1561	ncRNA
86	chr1	194761566	194762131	+	0.4	NA	Intergenic	Intergenic	1326867	NR_146895	105371673		NR_146895		LINC01724	-	long intergenic non-protein coding RNA 1724	ncRNA
53.0667	chr1	236438127	236438285	+	0.4	NA	intron (NM_080738, intron 4 of 5)	MLT1B|LTR|ERVL-MaLR	42793	NM_080738	128178	Hs.352224	NM_080738	ENSG00000186197	EDARADD	ECTD11A|ECTD11B|ED3|EDA3	EDAR associated death domain	protein-coding
56.8667-3	chr15	98232538	98232743	+	0.4	NA	Intergenic	Intergenic	98918	NR_146566	105371011		NR_146566		LINC02351	-	long intergenic non-protein coding RNA 2351	ncRNA
76.2667	chr4	33473868	33474203	+	0.4	NA	Intergenic	Intergenic	565858	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
91.4	chr17	72811413	72811682	+	0.4	NA	intron (NM_001352692, intron 6 of 9)	intron (NM_001352692, intron 6 of 9)	-171075	NR_033876	400619	Hs.447555	NR_033876	ENSG00000227036	LINC00511	LCAL5|onco-lncRNA-12	long intergenic non-protein coding RNA 511	ncRNA
73.2666	chr7	35489808	35490062	+	0.4	NA	Intergenic	Intergenic	176080	NR_038864	401324	Hs.377034	NR_038864		LOC401324	-	uncharacterized LOC401324	ncRNA
81	chr5	4487419	4487724	+	0.4	NA	Intergenic	Intergenic	-285910	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA
71.5333	chr2	47165922	47166420	+	0.4	NA	intron (NM_001305625, intron 2 of 5)	intron (NM_001305625, intron 2 of 5)	8036	NM_001305626	805	Hs.468442	NM_001743	ENSG00000143933	CALM2	CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM	calmodulin 2	protein-coding
96.5334	chr5	54367640	54367959	+	0.4	NA	intron (NR_126379, intron 1 of 4)	intron (NR_126379, intron 1 of 4)	46855	NR_126379	104355136	Hs.559024	NR_126379	ENSG00000249069	LINC01033	-	long intergenic non-protein coding RNA 1033	ncRNA
98.4667	chr12	38559877	38560474	+	0.4	NA	Intergenic	MSTC|LTR|ERVL-MaLR	243401	NM_001308340	144245	Hs.259305	NM_001013620	ENSG00000175548	ALG10B	ALG10|KCR1	ALG10 alpha-1,2-glucosyltransferase B	protein-coding
131.667	chr7	51292958	51293636	+	0.4	NA	intron (NM_015198, intron 1 of 12)	L1ME2|LINE|L1	23512	NM_001287438	23242	Hs.99141	NM_015198	ENSG00000106078	COBL	-	cordon-bleu WH2 repeat protein	protein-coding
87	chr4	46035344	46035606	+	0.4	NA	TTS (NM_173536)	TTS (NM_173536)	88579	NM_173536	2565	Hs.375051	NM_173536	ENSG00000163285	GABRG1	-	gamma-aminobutyric acid type A receptor gamma1 subunit	protein-coding
53.3-3	chr4	180679515	180679807	+	0.4	NA	Intergenic	Intergenic	479488	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
45.7333-9	chr8	129253506	129253690	+	0.4	NA	Intergenic	Intergenic	-12358	NR_033916	728724	Hs.49902	NR_033916	ENSG00000229140	LINC00977	-	long intergenic non-protein coding RNA 977	ncRNA
66.2	chr10	89531400	89531713	+	0.4	NA	intron (NM_213606, intron 2 of 7)	Tigger13a|DNA|TcMar-Tigger	4038	NM_213606	387700	Hs.530338	NM_213606	ENSG00000152779	SLC16A12	CJMG|CRT2|CTRCT47|MCT12	solute carrier family 16 member 12	protein-coding
46	chr3	171390816	171390991	+	0.4	NA	intron (NM_001161563, intron 1 of 31)	intron (NM_001161563, intron 1 of 31)	69502	NM_015028	23043	Hs.34024	NM_015028	ENSG00000154310	TNIK	MRT54	TRAF2 and NCK interacting kinase	protein-coding
81.8-2	chr5	12096363	12096652	+	0.4	NA	Intergenic	Intergenic	-192061	NM_001332	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
76.8	chr15	76503511	76503951	+	0.4	NA	intron (NR_148227, intron 24 of 32)	MIRc|SINE|MIR	-82916	NR_037464	100500855		NR_037464	ENSG00000266449	MIR3713	-	microRNA 3713	ncRNA
61	chr6	71862044	71862283	+	0.4	NA	Intergenic	L1MC3|LINE|L1	-24540	NM_001350413	22999	Hs.485729	NM_014989	ENSG00000079841	RIMS1	CORD7|RAB3IP2|RIM|RIM1	regulating synaptic membrane exocytosis 1	protein-coding
70.3334	chr20	54485795	54486121	+	0.4	NA	intron (NM_018431, intron 1 of 7)	L1MD1|LINE|L1	10365	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
55-2	chr9	128190680	128190871	+	0.4	NA	exon (NM_001131018, exon 2 of 17)	exon (NM_001131018, exon 2 of 17)	797	NM_001131017	25792	Hs.212395	NM_012127	ENSG00000148337	CIZ1	LSFR1|NP94|ZNF356	CDKN1A interacting zinc finger protein 1	protein-coding
54.2	chr1	57249329	57249542	+	0.4	NA	intron (NM_001353980, intron 5 of 5)	AluJb|SINE|Alu	173677	NM_001365793	1600	Hs.477370	NM_021080	ENSG00000173406	DAB1	SCA37	DAB adaptor protein 1	protein-coding
60.3333-2	chr4	91213317	91213531	+	0.4	NA	intron (NM_001145065, intron 10 of 10)	intron (NM_001145065, intron 10 of 10)	978393	NM_207491	401145	Hs.654735	NM_207491	ENSG00000184305	CCSER1	FAM190A	coiled-coil serine rich protein 1	protein-coding
127.733	chr9	3361099	3361578	+	0.4	NA	intron (NM_134428, intron 3 of 17)	intron (NM_134428, intron 3 of 17)	34258	NM_002919	5991	Hs.136829	NM_002919	ENSG00000080298	RFX3	-	regulatory factor X3	protein-coding
57.5999	chr15	79707032	79707305	+	0.4	NA	Intergenic	L1MA4|LINE|L1	189829	NR_037654	10588	Hs.194294	NM_006441	ENSG00000136371	MTHFS	HsT19268|NEDMEHM	methenyltetrahydrofolate synthetase	protein-coding
71.3667	chr6	90730604	90731120	+	0.366667	NA	Intergenic	Intergenic	-143790	NM_145332	6885	Hs.594838	NM_003188	ENSG00000135341	MAP3K7	CSCF|FMD2|MEKK7|TAK1|TGF1a	mitogen-activated protein kinase kinase kinase 7	protein-coding
57.1333	chr11	92580159	92580634	+	0.366667	NA	intron (NM_001008781, intron 2 of 24)	L2c|LINE|L2	228300	NM_001008781	120114	Hs.98523	NM_001008781	ENSG00000165323	FAT3	CDHF15|CDHR10|hFat3	FAT atypical cadherin 3	protein-coding
53.1001	chr8	31246404	31246585	+	0.366667	NA	Intergenic	Intergenic	-213138	NM_001015508	29942	Hs.373778	NM_013357	ENSG00000172733	PURG	PURG-A|PURG-B|PURGA|PURGB	purine rich element binding protein G	protein-coding
50.4-6	chr6	142043449	142043674	+	0.366667	NA	Intergenic	MER63B|DNA|hAT-Blackjack	45238	NM_002511	4829	Hs.552106	NM_002511	ENSG00000135577	NMBR	BB1|BB1R|NMB-R	neuromedin B receptor	protein-coding
78.3001	chr12	15336260	15336482	+	0.366667	NA	intron (NM_030667, intron 1 of 26)	intron (NM_030667, intron 1 of 26)	13863	NM_030667	5800	Hs.160871	NM_002848	ENSG00000151490	PTPRO	GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O	protein tyrosine phosphatase receptor type O	protein-coding
68.4001	chr12	42393476	42393809	+	0.366667	NA	exon (NM_001364824, exon 7 of 9)	exon (NM_001364824, exon 7 of 9)	61844	NM_001364834	51535	Hs.444157	NM_016488	ENSG00000134283	PPHLN1	CR|HSPC206|HSPC232	periphilin 1	protein-coding
68.4001-3	chr13	54501614	54502063	+	0.366667	NA	Intergenic	LTR16B1|LTR|ERVL	-189790	NR_031628	100302187		NR_031628	ENSG00000283126	MIR1297	MIRN1297|hsa-mir-1297|mir-1297	microRNA 1297	ncRNA
115.433	chr2	225091373	225091924	+	0.366667	NA	Intergenic	Intergenic	-49180	NM_014689	55619	Hs.46578	NM_014689	ENSG00000135905	DOCK10	DRIP2|Nbla10300|ZIZ3	dedicator of cytokinesis 10	protein-coding
80.5667	chr2	21695376	21695747	+	0.366667	NA	intron (NR_038837, intron 2 of 2)	intron (NR_038837, intron 2 of 2)	15091	NR_038837	645949	Hs.456782	NR_038837	ENSG00000229621	LINC01822	-	long intergenic non-protein coding RNA 1822	ncRNA
57.9333-2	chr2	44444477	44444777	+	0.366667	NA	intron (NM_024766, intron 3 of 10)	intron (NM_024766, intron 3 of 10)	82680	NM_024766	79823	Hs.468349	NM_024766	ENSG00000143919	CAMKMT	C2orf34|CLNMT|CaM KMT|Cam|KMT	calmodulin-lysine N-methyltransferase	protein-coding
82.7334	chr1	207378378	207378751	+	0.366667	NA	Intergenic	Intergenic	56886	NM_000574	1604	Hs.126517	NM_000574	ENSG00000196352	CD55	CHAPLE|CR|CROM|DAF|TC	CD55 molecule (Cromer blood group)	protein-coding
72.9001-2	chr8	126034012	126034227	+	0.366667	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-82922	NR_038446	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA
93.9001	chr4	114454607	114455185	+	0.366667	NA	Intergenic	Intergenic	-143506	NM_001322113	7368	Hs.144197	NM_003360	ENSG00000174607	UGT8	CGT|UGT4	UDP glycosyltransferase 8	protein-coding
83.1001	chr5	28282163	28282424	+	0.366667	NA	Intergenic	U2|snRNA|snRNA	5372	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
73.9	chr6	39616930	39617167	+	0.366667	NA	intron (NM_001289020, intron 5 of 21)	intron (NM_001289020, intron 5 of 21)	108360	NM_001289020	221458	Hs.588202	NM_145027	ENSG00000164627	KIF6	C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1	kinesin family member 6	protein-coding
68.0334	chr1	94692078	94692288	+	0.366667	NA	intron (NR_160779, intron 2 of 5)	LTR27|LTR|ERV1	53717	NR_039620	100616321		NR_039620	ENSG00000263526	MIR378G	-	microRNA 378g	ncRNA
40.3333	chr12	53563253	53563404	+	0.366667	NA	intron (NR_073163, intron 2 of 12)	intron (NR_073163, intron 2 of 12)	49344	NR_046221	100652999	Hs.633602	NR_046221	ENSG00000257550	LOC100652999	-	uncharacterized LOC100652999	ncRNA
74.8667	chr1	212919376	212919836	+	0.366667	NA	Intergenic	Intergenic	-30935	NM_001136474	79805	Hs.96885	NM_024749	ENSG00000143494	VASH2	-	vasohibin 2	protein-coding
50.7999-2	chr5	16404646	16404897	+	0.366667	NA	intron (NR_104625, intron 7 of 8)	intron (NR_104625, intron 7 of 8)	36331	NR_104625	101929505	Hs.639360	NR_104625	ENSG00000248150	LINC02150	-	long intergenic non-protein coding RNA 2150	ncRNA
60.7666-2	chr2	27894541	27894819	+	0.366667	NA	exon (NM_001329113, exon 3 of 14)	exon (NM_001329113, exon 3 of 14)	-3566	NR_028308	100302650	Hs.729719	NR_028308		BABAM2-AS1	BRE-AS1	BABAM2 antisense RNA 1	ncRNA
62.6667	chr12	127376288	127376495	+	0.366667	NA	Intergenic	L1ME1|LINE|L1	-36319	NR_110057	101927616	Hs.637827	NR_110057	ENSG00000256362	LINC02375	-	long intergenic non-protein coding RNA 2375	ncRNA
68.2334	chr2	199828996	199829246	+	0.366667	NA	intron (NM_001363886, intron 3 of 4)	intron (NM_001363886, intron 3 of 4)	22052	NM_001350855	348751	Hs.734578	NM_001350853	ENSG00000226124	FTCDNL1	FONG	formiminotransferase cyclodeaminase N-terminal like	protein-coding
113.3	chr8	103191881	103192228	+	0.366667	NA	intron (NM_001024372, intron 1 of 1)	(TTA)n|Simple_repeat|Simple_repeat	-19914	NR_109954	100499183	Hs.654812	NR_034092	ENSG00000247081	BAALC-AS1	FZD6-DT|lncFZD6	BAALC antisense RNA 1	ncRNA
29.3333-3	chr14	47252209	47252331	+	0.366667	NA	intron (NM_001113498, intron 2 of 16)	(TTAATAA)n|Simple_repeat|Simple_repeat	90976	NM_182830	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
49.5-2	chr2	25182680	25182879	+	0.366667	NA	Intergenic	LTR8|LTR|ERV1	-13928	NM_001035256	5443	Hs.1897	NM_000939	ENSG00000115138	POMC	ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC	proopiomelanocortin	protein-coding
93.9666	chr8	136183078	136183688	+	0.366667	NA	Intergenic	Intergenic	-347415	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
70.6667	chr8	50572461	50572787	+	0.366667	NA	intron (NR_135797, intron 13 of 20)	intron (NR_135797, intron 13 of 20)	408493	NM_001321778	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
110.267	chr8	49507194	49507575	+	0.366667	NA	intron (NR_134294, intron 1 of 1)	intron (NR_134294, intron 1 of 1)	4796	NR_134294	100507464	Hs.245745	NR_134294	ENSG00000253380	LOC100507464	-	uncharacterized LOC100507464	ncRNA
71.6001	chr9	71009494	71009790	+	0.366667	NA	intron (NM_001366143, intron 1 of 25)	L1MA6|LINE|L1	111979	NM_001366149	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding
40.0667-3	chr8	139268280	139268661	+	0.366667	NA	Intergenic	MER33|DNA|hAT-Charlie	-354429	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
63.5334	chr10	107933717	107933910	+	0.366667	NA	intron (NR_125760, intron 4 of 4)	intron (NR_125760, intron 4 of 4)	135480	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
122.533	chr8	125044083	125044921	+	0.366667	NA	intron (NM_014846, intron 21 of 28)	intron (NM_014846, intron 21 of 28)	45997	NM_003129	6713	Hs.71465	NM_003129	ENSG00000104549	SQLE	-	squalene epoxidase	protein-coding
57.5	chr1	161788603	161789046	+	0.366667	NA	intron (NM_007348, intron 4 of 15)	intron (NM_007348, intron 4 of 15)	22504	NM_007348	22926	Hs.492740	NM_007348	ENSG00000118217	ATF6	ACHM7|ATF6A	activating transcription factor 6	protein-coding
42.2667	chr1	29667835	29668020	+	0.366667	NA	Intergenic	L1ME1|LINE|L1	-317813	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA
79.9667	chr8	141843492	141843849	+	0.366667	NA	Intergenic	Intergenic	-57357	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA
55.8334	chr17	54883295	54883540	+	0.366667	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	-17274	NM_001321175	10040	Hs.153504	NM_005486	ENSG00000141198	TOM1L1	SRCASM	target of myb1 like 1 membrane trafficking protein	protein-coding
87.1667	chr5	96762823	96763152	+	0.366667	NA	3' UTR (NM_001349244, exon 20 of 20)	3' UTR (NM_001349244, exon 20 of 20)	19385	NR_104285	831	Hs.436186	NM_001750	ENSG00000153113	CAST	BS-17|PLACK	calpastatin	protein-coding
76.2999	chr6	158079708	158080172	+	0.366667	NA	intron (NM_003898, intron 18 of 26)	intron (NM_003898, intron 18 of 26)	62847	NM_001178088	8871	Hs.434494	NM_003898	ENSG00000078269	SYNJ2	INPP5H	synaptojanin 2	protein-coding
44-8	chr7	41649116	41649326	+	0.366667	NA	Intergenic	Intergenic	-44698	NR_027118	285954	Hs.656869	NR_027118	ENSG00000224116	INHBA-AS1	-	INHBA antisense RNA 1	ncRNA
67.9334-2	chr20	11653580	11653797	+	0.366667	NA	Intergenic	Intergenic	217027	NR_110635	728450	Hs.560990	NR_110635	ENSG00000228422	LINC00687	C20orf61|dJ1012F16.1	long intergenic non-protein coding RNA 687	ncRNA
45.9333-3	chr6	72265822	72265996	+	0.366667	NA	intron (NM_014989, intron 21 of 33)	(TCTT)n|Simple_repeat|Simple_repeat	48968	NM_001168410	22999	Hs.485729	NM_014989	ENSG00000079841	RIMS1	CORD7|RAB3IP2|RIM|RIM1	regulating synaptic membrane exocytosis 1	protein-coding
69.5668	chr7	134504934	134505323	+	0.366667	NA	Intergenic	Intergenic	-22439	NM_020299	57016	Hs.116724	NM_020299	ENSG00000198074	AKR1B10	AKR1B11|AKR1B12|ALDRLn|ARL-1|ARL1|HIS|HSI	aldo-keto reductase family 1 member B10	protein-coding
51.9667-4	chr18	5233386	5233600	+	0.366667	NA	Intergenic	L1ME3E|LINE|L1	4536	NR_026849	147525	Hs.657197	NM_152471		LINC00526	C18orf18|HsT959	long intergenic non-protein coding RNA 526	ncRNA
82.6667	chr4	78734406	78734768	+	0.366667	NA	Intergenic	Intergenic	-41763	NM_017593	55589	Hs.146551	NM_017593	ENSG00000138756	BMP2K	BIKE|HRIHFB2017	BMP2 inducible kinase	protein-coding
52.6667-3	chr18	72506758	72506957	+	0.366667	NA	Intergenic	Intergenic	37485	NM_182511	147381	Hs.569851	NM_182511	ENSG00000141668	CBLN2	-	cerebellin 2 precursor	protein-coding
48.9667	chr15	83127899	83128083	+	0.366667	NA	3' UTR (NM_016073, exon 6 of 6)	3' UTR (NM_016073, exon 6 of 6)	20346	NM_001353881	53346	Hs.513094	NM_023003	ENSG00000136404	TM6SF1	-	transmembrane 6 superfamily member 1	protein-coding
33.7-3	chr1	92220348	92220510	+	0.366667	NA	intron (NM_001012425, intron 1 of 5)	Tigger3a|DNA|TcMar-Tigger	2514	NM_001012425	388649	Hs.558823	NM_001012425	ENSG00000203910	C1orf146	-	chromosome 1 open reading frame 146	protein-coding
75.4668	chr6	157387776	157388133	+	0.366667	NA	intron (NM_024630, intron 1 of 8)	intron (NM_024630, intron 1 of 8)	6764	NM_153746	79683	Hs.596214	NM_024630	ENSG00000175048	ZDHHC14	NEW1CP	zinc finger DHHC-type containing 14	protein-coding
47.7667-3	chr4	61275042	61275428	+	0.366667	NA	intron (NM_001371342, intron 1 of 20)	intron (NM_001371342, intron 1 of 20)	73063	NM_001371342								
44.5334	chr15	57946000	57946130	+	0.366667	NA	Intergenic	Intergenic	67958	NM_170697	8854	Hs.643455	NM_003888	ENSG00000128918	ALDH1A2	RALDH(II)|RALDH2|RALDH2-T	aldehyde dehydrogenase 1 family member A2	protein-coding
66.4334	chr11	35807087	35807318	+	0.366667	NA	3' UTR (NM_017583, exon 5 of 5)	3' UTR (NM_017583, exon 5 of 5)	-136779	NM_001304264	143458	Hs.745134	NM_174902	ENSG00000179241	LDLRAD3	LRAD3	low density lipoprotein receptor class A domain containing 3	protein-coding
66.5666-2	chr3	8401541	8401838	+	0.366667	NA	intron (NR_033378, intron 3 of 3)	HAL1|LINE|L1	99969	NR_033378	100288428	Hs.651576	NR_033378	ENSG00000227110	LMCD1-AS1	-	LMCD1 antisense RNA 1	ncRNA
102.867	chr18	3649106	3649514	+	0.366667	NA	intron (NM_001242761, intron 7 of 11)	intron (NM_001242761, intron 7 of 11)	45573	NR_119377	84777	Hs.659053	NM_032691		DLGAP1-AS2	-	DLGAP1 antisense RNA 2	ncRNA
97.6334	chr3	109865155	109865566	+	0.366667	NA	Intergenic	L1MCa|LINE|L1	262532	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
84.8666	chr3	21867911	21868319	+	0.366667	NA	Intergenic	MIRb|SINE|MIR	-89024	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
35.9667-2	chr2	181866575	181866729	+	0.366667	NA	Intergenic	Intergenic	-25078	NM_001287503	6744	Hs.196983	NM_006751	ENSG00000138434	ITPRID2	CS-1|CS1|KRAP|SPAG13|SSFA2	ITPR interacting domain containing 2	protein-coding
76.1001	chr10	55915253	55915525	+	0.366667	NA	Intergenic	Intergenic	-287447	NM_001354404	65217	Hs.280209	NM_033056	ENSG00000150275	PCDH15	CDHR15|DFNB23|USH1F	protocadherin related 15	protein-coding
69.5	chr2	63984291	63984604	+	0.366667	NA	intron (NM_001005739, intron 1 of 22)	MIR|SINE|MIR	34981	NM_016516	51542	Hs.48499	NM_016516	ENSG00000143952	VPS54	HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L	VPS54 subunit of GARP complex	protein-coding
37.6667	chr1	66745424	66745536	+	0.366667	NA	3' UTR (NM_001350217, exon 25 of 25)	3' UTR (NM_001350217, exon 25 of 25)	-6979	NM_152665	200132	Hs.479226	NM_152665	ENSG00000152760	TCTEX1D1	-	Tctex1 domain containing 1	protein-coding
27.7334	chr5	8591527	8591623	+	0.366667	NA	Intergenic	Intergenic	130650	NR_039663	100616142		NR_039663	ENSG00000284000	MIR4458	mir-4458	microRNA 4458	ncRNA
97.1334	chr16	35851918	35852281	+	0.366667	NA	Intergenic	L1MC3|LINE|L1	105547	NR_033985	400533	Hs.499135	NR_033985	ENSG00000261122	LINC02167	-	long intergenic non-protein coding RNA 2167	ncRNA
57.7333	chr10	65919254	65919500	+	0.366667	NA	3' UTR (NM_013266, exon 18 of 18)	3' UTR (NM_013266, exon 18 of 18)	347952	NR_120647	101928913	Hs.568857	NR_120647		LINC01515	-	long intergenic non-protein coding RNA 1515	ncRNA
46.9334	chr2	68306976	68307167	+	0.366667	NA	intron (NM_015463, intron 2 of 2)	intron (NM_015463, intron 2 of 2)	12980	NM_001111101	25927	Hs.212885	NM_015463	ENSG00000119865	CNRIP1	C2orf32|CRIP1	cannabinoid receptor interacting protein 1	protein-coding
96.4333	chr2	57324866	57325265	+	0.366667	NA	Intergenic	L1ME2|LINE|L1	-582586	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
110.2	chr17	58036936	58037520	+	0.366667	NA	Intergenic	L1MB8|LINE|L1	-29882	NR_034041	6426	Hs.68714	NM_006924	ENSG00000136450	SRSF1	ASF|SF2|SF2p33|SFRS1|SRp30a	serine and arginine rich splicing factor 1	protein-coding
40.1666-2	chr3	133141021	133141194	+	0.366667	NA	intron (NM_001282865, intron 1 of 3)	intron (NM_001282865, intron 1 of 3)	16286	NM_001282865	66000	Hs.191616	NM_023943	ENSG00000144868	TMEM108	CT124|RTLN	transmembrane protein 108	protein-coding
57.9333-3	chr8	103817682	103817891	+	0.366667	NA	intron (NM_001348495, intron 4 of 24)	AluSz|SINE|Alu	-1434	NM_001348503	9699	Hs.655271	NM_014677	ENSG00000176406	RIMS2	OBOE|RAB3IP3|RIM2	regulating synaptic membrane exocytosis 2	protein-coding
52.3334	chr11	31483769	31483976	+	0.366667	NA	intron (NM_144981, intron 1 of 6)	intron (NM_144981, intron 1 of 6)	25750	NM_144981	196294	Hs.502223	NM_144981	ENSG00000148950	IMMP1L	IMMP1|IMP1|IMP1-LIKE	inner mitochondrial membrane peptidase subunit 1	protein-coding
59.7	chr4	45257933	45258224	+	0.366667	NA	Intergenic	Intergenic	-531444	NR_073095	132789	Hs.21398	NM_138335	ENSG00000163281	GNPDA2	GNP2|SB52	glucosamine-6-phosphate deaminase 2	protein-coding
52.4667	chr5	20040549	20040761	+	0.366667	NA	intron (NM_001291956, intron 2 of 14)	L3|LINE|CR1	-52455	NM_001349563	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
64.9001	chr7	78582651	78582912	+	0.366667	NA	intron (NM_001301128, intron 3 of 20)	intron (NM_001301128, intron 3 of 20)	235539	NR_003680	399670	Hs.568045	NR_003680	ENSG00000231322	RPL13AP17	RPL13A_6_816	ribosomal protein L13a pseudogene 17	pseudo
73.1334	chr3	96150659	96151032	+	0.366667	NA	Intergenic	Intergenic	-209119	NR_107027	102465864		NR_107027	ENSG00000278103	MIR8060	hsa-mir-8060	microRNA 8060	ncRNA
63.4334-2	chr10	64861330	64861905	+	0.366667	NA	Intergenic	Intergenic	36089	NR_001446	305	Hs.591361	NR_001446		ANXA2P3	ANX2L3|ANX2P3|LIP2|LPC2C	annexin A2 pseudogene 3	pseudo
54.9666-2	chr1	233898957	233899241	+	0.366667	NA	Intergenic	L1MA9|LINE|L1	-5577	NM_173508	148641	Hs.158748	NM_173508	ENSG00000183780	SLC35F3	-	solute carrier family 35 member F3	protein-coding
64.4667	chr17	72007697	72008009	+	0.366667	NA	Intergenic	Intergenic	18126	NR_110876	102723505	Hs.547482	NR_110876		ROCR	LINC02095	regulator of chondrogenesis RNA	ncRNA
70.1	chr6	104798274	104798692	+	0.333333	NA	intron (NM_001350555, intron 4 of 20)	intron (NM_001350555, intron 4 of 20)	61063	NM_001321084	57531	Hs.434340	NM_020771	ENSG00000085382	HACE1	SPPRS	HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1	protein-coding
96.9332	chr4	32099063	32099377	+	0.333333	NA	intron (NR_125936, intron 1 of 2)	intron (NR_125936, intron 1 of 2)	-76798	NR_134682	105377651	Hs.581935	NR_134682		LOC105377651	-	uncharacterized LOC105377651	ncRNA
73.4999	chr11	108743301	108743759	+	0.333333	NA	intron (NM_004398, intron 13 of 17)	intron (NM_004398, intron 13 of 17)	78461	NM_004398	1662	Hs.591931	NM_004398	ENSG00000178105	DDX10	Dbp4|HRH-J8	DEAD-box helicase 10	protein-coding
107.8	chr1	191043361	191043982	+	0.333333	NA	Intergenic	Intergenic	184827	NR_146892	105371660	Hs.127094	NR_146892	ENSG00000233882	LINC01680	-	long intergenic non-protein coding RNA 1680	ncRNA
80.8999	chr1	42127781	42128209	+	0.333333	NA	Intergenic	L1MEg|LINE|L1	-25415	NM_007102	2981	Hs.32966	NM_007102	ENSG00000044012	GUCA2B	GCAP-II|UGN	guanylate cyclase activator 2B	protein-coding
32.4-13	chr5	87524578	87524679	+	0.333333	NA	Intergenic	MER50|LTR|ERV1	-111595	NM_001363539	902	Hs.292524	NM_001239	ENSG00000134480	CCNH	CAK|CycH|p34|p37	cyclin H	protein-coding
51.0666-3	chr6	110642575	110642798	+	0.333333	NA	intron (NM_001300963, intron 5 of 13)	FRAM|SINE|Alu	-166073	NM_033125	85413	Hs.520319	NM_033125	ENSG00000004809	SLC22A16	CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1	solute carrier family 22 member 16	protein-coding
47.3333-4	chr18	23903512	23903735	+	0.333333	NA	intron (NM_001127717, intron 48 of 73)	intron (NM_001127717, intron 48 of 73)	30603	NM_001127718	3909	Hs.436367	NM_000227	ENSG00000053747	LAMA3	BM600|E170|LAMNA|LOCS	laminin subunit alpha 3	protein-coding
56.6666-2	chr5	94167714	94167986	+	0.333333	NA	intron (NM_001145678, intron 20 of 20)	intron (NM_001145678, intron 20 of 20)	-56151	NM_001163417	83989	Hs.600086	NM_032042	ENSG00000113391	FAM172A	C5orf21|Toupee	family with sequence similarity 172 member A	protein-coding
112.267	chr7	54965624	54966012	+	0.333333	NA	Intergenic	MER2|DNA|TcMar-Tigger	-53199	NM_001346941	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding
72.3999	chr8	121257197	121257567	+	0.333333	NA	Intergenic	Intergenic	-381964	NR_002835	594842	Hs.668686	NR_002835		HAS2-AS1	HAS2-AS|HAS2AS|HASNT|NCRNA00077	HAS2 antisense RNA 1	ncRNA
55.8334-2	chr17	60445310	60445640	+	0.333333	NA	3' UTR (NM_001282476, exon 12 of 12)	3' UTR (NM_001282476, exon 12 of 12)	22986	NM_181707	124773	Hs.129312	NM_181707	ENSG00000141371	C17orf64	-	chromosome 17 open reading frame 64	protein-coding
23.6333-7	chr20	49360318	49360410	+	0.333333	NA	Intergenic	Intergenic	79681	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	small nucleolar RNA, C/D box 12	snoRNA
71.7999	chr2	170581334	170581753	+	0.333333	NA	intron (NM_001083615, intron 31 of 33)	L1M5|LINE|L1	133024	NR_027433	440925	Hs.668461	NM_001013712	ENSG00000222033	LINC01124	-	long intergenic non-protein coding RNA 1124	ncRNA
97.0666	chr14	65513569	65514136	+	0.333333	NA	intron (NM_004480, intron 2 of 9)	LTR51|LTR|ERV1	42750	NR_030355	693210		NR_030355	ENSG00000207781	MIR625	MIRN625|hsa-mir-625	microRNA 625	ncRNA
46.6667-5	chr8	120258196	120258436	+	0.333333	NA	intron (NM_021110, intron 23 of 47)	MLT1K|LTR|ERVL-MaLR	133214	NM_021110	7373	Hs.409662	NM_021110	ENSG00000187955	COL14A1	UND	collagen type XIV alpha 1 chain	protein-coding
38.6-6	chr2	13861528	13861658	+	0.333333	NA	Intergenic	Intergenic	539365	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA
34.9333-2	chr11	93380902	93381040	+	0.333333	NA	intron (NM_181645, intron 7 of 13)	intron (NM_181645, intron 7 of 13)	50254	NM_181645	159989	Hs.436625	NM_181645	ENSG00000165325	DEUP1	CCDC67	deuterosome assembly protein 1	protein-coding
61.7999	chr4	16211662	16211949	+	0.333333	NA	intron (NM_153365, intron 2 of 13)	intron (NM_153365, intron 2 of 13)	14666	NM_153365	202018	Hs.479223	NM_153365	ENSG00000169762	TAPT1	CMVFR|OCLSBG	transmembrane anterior posterior transformation 1	protein-coding
55.5334	chr5	101378700	101379116	+	0.333333	NA	Intergenic	L1PA16|LINE|L1	-475626	NM_175052	7903	Hs.308628	NM_005668	ENSG00000113532	ST8SIA4	PST|PST1|SIAT8D|ST8SIA-IV	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	protein-coding
64.1333-2	chr17	58467726	58467940	+	0.333333	NA	intron (NM_001080439, intron 2 of 5)	intron (NM_001080439, intron 2 of 5)	20575	NM_001080439	124535	Hs.380061	NM_001080439	ENSG00000176160	HSF5	HSF 5|HSTF 5	heat shock transcription factor 5	protein-coding
36.6667-6	chr8	106951394	106951593	+	0.333333	NA	Intergenic	Intergenic	-181249	NM_139166	137735	Hs.374668	NM_139166	ENSG00000174429	ABRA	STARS	actin binding Rho activating protein	protein-coding
40.6-5	chr3	105672744	105672992	+	0.333333	NA	intron (NR_135810, intron 17 of 20)	intron (NR_135810, intron 17 of 20)	194723	NM_001321813	868	Hs.430589	NM_170662	ENSG00000114423	CBLB	Cbl-b|Nbla00127|RNF56	Cbl proto-oncogene B	protein-coding
63.0667	chr2	150429505	150429846	+	0.333333	NA	Intergenic	Intergenic	58020	NM_001254738	390	Hs.6838	NM_005168	ENSG00000115963	RND3	ARHE|Rho8|RhoE|memB	Rho family GTPase 3	protein-coding
42.3333-4	chr6	52516973	52517223	+	0.333333	NA	intron (NM_012288, intron 2 of 10)	MIRb|SINE|MIR	59962	NM_012288	9697	Hs.520182	NM_012288	ENSG00000065308	TRAM2	-	translocation associated membrane protein 2	protein-coding
47.3333	chr10	41897185	41897582	+	0.333333	NA	Intergenic	(AATGG)n|Simple_repeat|Simple_repeat	470662	NR_024380	441666	Hs.255729	NR_024380	ENSG00000215146	LOC441666	-	zinc finger protein 91 pseudogene	pseudo
89.8666	chr3	112274513	112275028	+	0.333333	NA	intron (NM_001320531, intron 6 of 27).2	intron (NM_001320531, intron 6 of 27).2	19446	NR_135297	285335	Hs.680112	NM_183061	ENSG00000172139	SLC9C1	NHE|NHE-10|SLC9A10|sperm-NHE	solute carrier family 9 member C1	protein-coding
32.5	chr10	85298140	85298374	+	0.333333	NA	Intergenic	Intergenic	-99319	NR_120667	101929624	Hs.588831	NR_120667	ENSG00000237267	LINC01519	-	long intergenic non-protein coding RNA 1519	ncRNA
60.5-2	chr19	44837063	44837289	+	0.333333	NA	Intergenic	AluSz|SINE|Alu	-9121	NM_002856	5819	Hs.655455	NM_002856	ENSG00000130202	NECTIN2	CD112|HVEB|PRR2|PVRL2|PVRR2	nectin cell adhesion molecule 2	protein-coding
55.8667-2	chr8	125913443	125913859	+	0.333333	NA	Intergenic	Intergenic	37546	NR_038447	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA
60.1333	chr1	173828034	173828399	+	0.333333	NA	intron (NM_001365212, intron 2 of 15)	intron (NM_001365212, intron 2 of 15)	3543	NM_001365213	55157	Hs.647707	NM_018122	ENSG00000117593	DARS2	ASPRS|LBSL|MT-ASPRS|mtAspRS	aspartyl-tRNA synthetase 2, mitochondrial	protein-coding
52.4-3	chr22	48589703	48589956	+	0.333333	NA	intron (NM_015381, intron 1 of 3)	MLT1C|LTR|ERVL-MaLR	13489	NM_015381	25817	Hs.436854	NM_015381	ENSG00000219438	TAFA5	FAM19A5|QLLK5208|TAFA-5|UNQ5208	TAFA chemokine like family member 5	protein-coding
38.6666	chr18	41369790	41369945	+	0.333333	NA	Intergenic	Intergenic	150810	NR_002838	641516	Hs.116612	NR_002838	ENSG00000267313	KC6	-	keratoconus gene 6	ncRNA
42.3333-2	chr3	39935776	39935947	+	0.333333	NA	intron (NM_001284424, intron 2 of 15)	MER99|DNA|hAT?	126201	NM_001284425	25924	Hs.594535	NM_015460	ENSG00000170011	MYRIP	SLAC2-C|SLAC2C	myosin VIIA and Rab interacting protein	protein-coding
65.8666-2	chr6	155105759	155106045	+	0.333333	NA	intron (NM_012454, intron 1 of 25)	intron (NM_012454, intron 1 of 25)	15613	NM_012454	26230	Hs.586279	NM_012454	ENSG00000146426	TIAM2	STEF|TIAM-2	T cell lymphoma invasion and metastasis 2	protein-coding
70.4665	chr8	79440649	79441019	+	0.333333	NA	Intergenic	Intergenic	108646	NR_162137	113219456		NR_162137		MIR12123	-	microRNA 12123	ncRNA
52.0666	chr18	1593347	1593755	+	0.333333	NA	Intergenic	L1ME1|LINE|L1	-233922	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
63.2334-2	chr3	89226334	89226751	+	0.333333	NA	intron (NM_182644, intron 3 of 6)	intron (NM_182644, intron 3 of 6)	118921	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
51.8-2	chr15	26796758	26797139	+	0.333333	NA	Intergenic	L1MCa|LINE|L1	-23185	NM_021912	2562	Hs.302352	NM_000814	ENSG00000166206	GABRB3	ECA5|EIEE43	gamma-aminobutyric acid type A receptor beta3 subunit	protein-coding
48.8-3	chr8	37118167	37118474	+	0.333333	NA	Intergenic	ERVL-B4-int|LTR|ERVL	333946	NR_134267	157855	Hs.13861	NM_001031836	ENSG00000215262	KCNU1	KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3	potassium calcium-activated channel subfamily U member 1	protein-coding
46.5-2	chr17	33913714	33914190	+	0.333333	NA	intron (NM_001094, intron 1 of 9)	MIRb|SINE|MIR	242854	NM_001094	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding
48.5333-6	chr5	128212248	128212750	+	0.333333	NA	Intergenic	Intergenic	128733	NM_001046	6558	Hs.162585	NM_001046	ENSG00000064651	SLC12A2	BSC|BSC2|NKCC1|PPP1R141	solute carrier family 12 member 2	protein-coding
42.0666-4	chr9	115468169	115468398	+	0.333333	NA	Intergenic	LTR1F2|LTR|ERV1	275956	NR_109805	101928775	Hs.522362	NR_109805	ENSG00000228714	LOC101928775	-	uncharacterized LOC101928775	ncRNA
48.6-2	chr12	108334653	108334821	+	0.333333	NA	intron (NM_004072, intron 1 of 2)	MIRc|SINE|MIR	4574	NM_001142343	1240	Hs.197143	NM_004072	ENSG00000174600	CMKLR1	CHEMERINR|ChemR23|DEZ|RVER1	chemerin chemokine-like receptor 1	protein-coding
35.8-2	chr15	87521811	87521947	+	0.333333	NA	Intergenic	Intergenic	-55050	NR_026869	145978	Hs.350808	NM_152454	ENSG00000259527	LINC00052	NCRNA00052|TMEM83	long intergenic non-protein coding RNA 52	ncRNA
53.1667-2	chr8	87705780	87705983	+	0.333333	NA	Intergenic	THE1C-int|LTR|ERVL-MaLR	168134	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
70.1333	chr13	82688889	82689252	+	0.333333	NA	Intergenic	L1MC4|LINE|L1	1193323	NM_052910	114798	Hs.415478	NM_052910	ENSG00000178235	SLITRK1	LRRC12|TTM	SLIT and NTRK like family member 1	protein-coding
83.7	chr5	125786706	125787085	+	0.333333	NA	Intergenic	L2a|LINE|L2	293634	NR_109887	101927460	Hs.407582	NR_109887	ENSG00000260192	LINC02240	-	long intergenic non-protein coding RNA 2240	ncRNA
45.7333	chr10	57076694	57076879	+	0.333333	NA	Intergenic	Intergenic	227773	NR_037490	100500834		NR_037490	ENSG00000264747	MIR3924	-	microRNA 3924	ncRNA
35-6	chr3	97351252	97351617	+	0.333333	NA	intron (NM_001080448, intron 5 of 17)	intron (NM_001080448, intron 5 of 17)	-88173	NM_173655	285220	Hs.272208	NM_173655	ENSG00000080224	EPHA6	EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066	EPH receptor A6	protein-coding
37.5333-4	chr12	29242638	29242813	+	0.333333	NA	intron (NM_001271784, intron 1 of 10)	intron (NM_001271784, intron 1 of 10)	19059	NM_018099	55711	Hs.684482	NM_018099	ENSG00000064763	FAR2	HEL-S-81|MLSTD1|SDR10E2	fatty acyl-CoA reductase 2	protein-coding
25.8334	chr2	63742142	63742266	+	0.333333	NA	Intergenic	Intergenic	-98760	NM_001001521	7360	Hs.516217	NM_006759	ENSG00000169764	UGP2	UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379	UDP-glucose pyrophosphorylase 2	protein-coding
63.0666	chr8	139125042	139125336	+	0.333333	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-211148	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
69.4333	chr16	52342930	52343267	+	0.333333	NA	Intergenic	L1MEf|LINE|L1	84534	NR_135281	283854	Hs.266768	NR_135281	ENSG00000260887	CASC22	LINC01373|LincRNA-ENST00000515084|TCONS_00024290	cancer susceptibility 22	ncRNA
59.3333-2	chr3	193962089	193962520	+	0.333333	NA	intron (NR_033944, intron 1 of 2)	intron (NR_033944, intron 1 of 2)	31934	NR_027764	100128023	Hs.730112	NR_027764		DPPA2P3	-	developmental pluripotency associated 2 pseudogene 3	pseudo
101.133	chr1	41636040	41636682	+	0.333333	NA	intron (NM_001127714, intron 1 of 7)	L1ME3G|LINE|L1	-151678	NM_001302269	1907	Hs.1407	NM_001956	ENSG00000127129	EDN2	ET-2|ET2|PPET2	endothelin 2	protein-coding
25.9-3	chr2	65815026	65815227	+	0.333333	NA	Intergenic	L3|LINE|CR1	-382527	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding
51.3999-2	chr4	54904620	54904835	+	0.333333	NA	Intergenic	Intergenic	220868	NM_002253	3791	Hs.479756	NM_002253	ENSG00000128052	KDR	CD309|FLK1|VEGFR|VEGFR2	kinase insert domain receptor	protein-coding
91.6	chr1	115530103	115530395	+	0.333333	NA	Intergenic	MLT2C1|LTR|ERVL	-111721	NM_001172411	81839	Hs.515130	NM_138959	ENSG00000173218	VANGL1	KITENIN|LPP2|STB2|STBM2	VANGL planar cell polarity protein 1	protein-coding
19.0666-3	chr5	28432084	28432148	+	0.333333	NA	Intergenic	L2a|LINE|L2	-144451	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
66.6999-2	chr8	33046905	33047131	+	0.333333	NA	Intergenic	L1MD1|LINE|L1	325183	NM_001322197	3084	Hs.453951	NM_004495	ENSG00000157168	NRG1	ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF	neuregulin 1	protein-coding
60.7333-2	chr6	51368244	51368732	+	0.333333	NA	Intergenic	Intergenic	-253382	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
56.9-2	chr8	29700785	29701150	+	0.333333	NA	Intergenic	HAL1|LINE|L1	47142	NR_026765	619351	Hs.566911	NR_026765	ENSG00000251191	LINC00589	C8orf75|TSLNC8	long intergenic non-protein coding RNA 589	ncRNA
52.4666	chr1	174143442	174143657	+	0.333333	NA	intron (NR_121197, intron 3 of 3)	L2|LINE|L2	15738	NR_121197	102724601	Hs.563791	NR_121197	ENSG00000227373	RABGAP1L-DT	-	RABGAP1L divergent transcript	ncRNA
62.3334-2	chr6	55945906	55946175	+	0.333333	NA	Intergenic	L1MD|LINE|L1	-70450	NM_021073	653	Hs.296648	NM_021073	ENSG00000112175	BMP5	-	bone morphogenetic protein 5	protein-coding
63.8	chr5	31136390	31136795	+	0.333333	NA	Intergenic	Intergenic	-57094	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
90.3998	chr7	89707533	89708003	+	0.333333	NA	Intergenic	L1MA7|LINE|L1	-411632	NR_003551	442523	Hs.406964	NR_003551	ENSG00000235436	DPY19L2P4	-	DPY19L2 pseudogene 4	pseudo
49.4666	chr10	20241365	20241766	+	0.333333	NA	intron (NM_032812, intron 12 of 13)	AluJo|SINE|Alu	-310405	NR_039822	100616383		NR_039822	ENSG00000265372	MIR4675	-	microRNA 4675	ncRNA
62.5666-2	chr3	167814091	167814536	+	0.333333	NA	intron (NM_001122752, intron 6 of 8)	intron (NM_001122752, intron 6 of 8)	78590	NM_005025	5274	Hs.478153	NM_005025	ENSG00000163536	SERPINI1	PI12|neuroserpin	serpin family I member 1	protein-coding
39.3334-2	chr10	65536921	65537228	+	0.333333	NA	Intergenic	Intergenic	-34351	NR_120647	101928913	Hs.568857	NR_120647		LINC01515	-	long intergenic non-protein coding RNA 1515	ncRNA
36.8333-9	chr9	128190315	128190451	+	0.333333	NA	exon (NM_001131018, exon 3 of 17)	exon (NM_001131018, exon 3 of 17)	1189	NM_001131017	25792	Hs.212395	NM_012127	ENSG00000148337	CIZ1	LSFR1|NP94|ZNF356	CDKN1A interacting zinc finger protein 1	protein-coding
52.1333	chr18	1213949	1214350	+	0.333333	NA	Intergenic	L1MA5A|LINE|L1	145480	NR_110327	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
35.8334-2	chr3	95171676	95171846	+	0.333333	NA	Intergenic	Intergenic	233498	NR_015400	255025	Hs.130994	NR_015400	ENSG00000239589	LINC00879	-	long intergenic non-protein coding RNA 879	ncRNA
40.7333-5	chr21	29825580	29825764	+	0.333333	NA	intron (NM_000830, intron 1 of 16)	intron (NM_000830, intron 1 of 16)	77497	NR_027021	642976	Hs.473554	NR_027021		GRIK1-AS1	C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110	GRIK1 antisense RNA 1	ncRNA
50.1333-5	chr8	80767435	80767707	+	0.333333	NA	intron (NM_001033723, intron 2 of 8)	A-rich|Low_complexity|Low_complexity	106897	NM_001367783	619279	Hs.434957	NM_032651	ENSG00000164684	ZNF704	Gig1	zinc finger protein 704	protein-coding
41.8-2	chr5	18522091	18522238	+	0.333333	NA	Intergenic	Intergenic	714890	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
68.7999	chr3	89798506	89798794	+	0.333333	NA	Intergenic	Intergenic	691029	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
54.5333-3	chr5	32849054	32849357	+	0.333333	NA	Intergenic	L2a|LINE|L2	-98238	NR_033832	340113	Hs.434404	NR_033832	ENSG00000248279	LINC02120	-	long intergenic non-protein coding RNA 2120	ncRNA
59.9334	chr12	4418692	4419180	+	0.333333	NA	Intergenic	MER20B|DNA|hAT-Charlie	26678	NM_020996	2251	Hs.166015	NM_020996	ENSG00000111241	FGF6	HBGF-6|HST2	fibroblast growth factor 6	protein-coding
96.6332	chr14	59871820	59872231	+	0.333333	NA	Intergenic	Intergenic	-1249	NM_021136	6252	Hs.368626	NM_021136	ENSG00000139970	RTN1	NSP	reticulon 1	protein-coding
48.1333	chr10	31769695	31769966	+	0.333333	NA	Intergenic	Charlie7|DNA|hAT-Charlie	139096	NM_001270699	94134	Hs.499264	NM_018287	ENSG00000165322	ARHGAP12	-	Rho GTPase activating protein 12	protein-coding
24.1333-9	chr2	111092623	111092704	+	0.333333	NA	intron (NM_001371254, intron 17 of 18)	L1MC5|LINE|L1	22925	NR_122074	400997	Hs.652337	NR_122074	ENSG00000204581	ACOXL-AS1	-	ACOXL antisense RNA 1	ncRNA
44-9	chr7	87350004	87350141	+	0.333333	NA	intron (NM_001243745, intron 3 of 3)	PRIMA41-int|LTR|ERV1	4408	NM_001243745	54677	Hs.125039	NM_021151	ENSG00000005469	CROT	COT	carnitine O-octanoyltransferase	protein-coding
49.2666	chr1	8793222	8793484	+	0.333333	NA	intron (NM_012102, intron 1 of 23)	intron (NM_012102, intron 1 of 23)	24287	NM_012102	473	Hs.463041	NM_012102	ENSG00000142599	RERE	ARG|ARP|ATN1L|DNB1|NEDBEH	arginine-glutamic acid dipeptide repeats	protein-coding
26.4-8	chr2	146563162	146563263	+	0.333333	NA	Intergenic	Intergenic	-23845	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
48.3999	chr20	40825999	40826265	+	0.333333	NA	Intergenic	MLT1F|LTR|ERVL-MaLR	-111509	NR_145814	109623474		NR_145814		SNORD154	-	small nucleolar RNA, C/D box 154	snoRNA
33.3666	chr1	246128447	246128559	+	0.333333	NA	intron (NM_022743, intron 5 of 11)	MIRb|SINE|MIR	288909	NM_022743	64754	Hs.567571	NM_022743	ENSG00000185420	SMYD3	KMT3E|ZMYND1|ZNFN3A1|bA74P14.1	SET and MYND domain containing 3	protein-coding
72.6667	chr3	52398718	52399352	+	0.333333	NA	exon (NM_015512, exon 76 of 78)	exon (NM_015512, exon 76 of 78)	10973	NM_004656	8314	Hs.106674	NM_004656	ENSG00000163930	BAP1	HUCEP-13|UCHL2|hucep-6	BRCA1 associated protein 1	protein-coding
52.9999	chr18	12839865	12840148	+	0.333333	NA	intron (NM_080423, intron 2 of 8)	intron (NM_080423, intron 2 of 8)	956	NM_001308287	5771	Hs.654527	NM_002828	ENSG00000175354	PTPN2	PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP	protein tyrosine phosphatase non-receptor type 2	protein-coding
63.6	chr8	126741999	126742427	+	0.333333	NA	Intergenic	L1PB3|LINE|L1	-183735	NM_174911	157638	Hs.124951	NM_174911	ENSG00000168672	LRATD2	BCMP101|FAM84B|NSE2	LRAT domain containing 2	protein-coding
62.3333-2	chr7	1593594	1593903	+	0.333333	NA	Intergenic	Intergenic	-20722	NR_001288	260341	Hs.534596	NR_001288		TFAMP1	MTTF1|TCF6L1	transcription factor A, mitochondrial pseudogene 1	pseudo
48.3333	chr12	7778685	7778958	+	0.333333	NA	Intergenic	AluSq2|SINE|Alu	-10581	NM_001297698	79923	Hs.635882	NM_024865	ENSG00000111704	NANOG	-	Nanog homeobox	protein-coding
75.9334	chr1	102487792	102488226	+	0.333333	NA	Intergenic	Intergenic	-490775	NM_001288823	118427	Hs.484475	NM_058170	ENSG00000118733	OLFM3	NOE3|NOELIN3|OPTIMEDIN	olfactomedin 3	protein-coding
37.9333	chr12	47829323	47829513	+	0.333333	NA	Intergenic	Intergenic	-9515	NR_160436	51564	Hs.200063	NM_015401	ENSG00000061273	HDAC7	HD7|HD7A|HDAC7A	histone deacetylase 7	protein-coding
47.4667	chr4	40579576	40579885	+	0.333333	NA	intron (NM_001371114, intron 1 of 5)	intron (NM_001371114, intron 1 of 5)	50134	NM_001098634	54502	Hs.518727	NM_019027	ENSG00000163694	RBM47	NET18	RNA binding motif protein 47	protein-coding
66.4999-3	chr5	145174327	145174737	+	0.333333	NA	Intergenic	MIR|SINE|MIR	660810	NM_182960	153768	Hs.314261	NM_138492	ENSG00000186314	PRELID2	-	PRELI domain containing 2	protein-coding
85.5333	chr1	215094622	215095126	+	0.333333	NA	intron (NM_001017424, intron 2 of 6)	intron (NM_001017424, intron 2 of 6)	12137	NM_014217	3776	Hs.497745	NM_014217	ENSG00000082482	KCNK2	K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e	potassium two pore domain channel subfamily K member 2	protein-coding
30.9333	chr1	63247092	63247216	+	0.333333	NA	intron (NR_038252, intron 4 of 11)	MIR|SINE|MIR	70103	NR_038252	199899	Hs.116210	NR_038252	ENSG00000224209	LINC00466	-	long intergenic non-protein coding RNA 466	ncRNA
82.3999	chr6	141512548	141512857	+	0.333333	NA	Intergenic	Intergenic	576097	NM_002511	4829	Hs.552106	NM_002511	ENSG00000135577	NMBR	BB1|BB1R|NMB-R	neuromedin B receptor	protein-coding
27.9334	chr1	10915373	10915521	+	0.333333	NA	Intergenic	Intergenic	51240	NM_001366227	148345	Hs.127026	NM_173507	ENSG00000175262	C1orf127	-	chromosome 1 open reading frame 127	protein-coding
100.2	chr12	123949624	123950043	+	0.333333	NA	intron (NM_001304958, intron 1 of 5)	intron (NM_001304958, intron 1 of 5)	22226	NM_001304960	80212	Hs.114111	NM_025140	ENSG00000119242	CCDC92	-	coiled-coil domain containing 92	protein-coding
63.0001	chr15	60424999	60425337	+	0.333333	NA	intron (NR_147171, intron 16 of 16)	intron (NR_147171, intron 16 of 16)	-27182	NM_001136015	302	Hs.511605	NM_004039	ENSG00000182718	ANXA2	ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV	annexin A2	protein-coding
69.8666	chr6	87096720	87097031	+	0.333333	NA	Intergenic	L1ME4b|LINE|L1	-1769	NM_001252383	1081	Hs.119689	NM_000735	ENSG00000135346	CGA	CG-ALPHA|FSHA|GPA1|GPHA1|GPHa|HCG|LHA|TSHA	glycoprotein hormones, alpha polypeptide	protein-coding
90.6666	chr5	40604079	40604503	+	0.333333	NA	Intergenic	Intergenic	-75624	NM_000958	5734	Hs.199248	NM_000958	ENSG00000171522	PTGER4	EP4|EP4R	prostaglandin E receptor 4	protein-coding
66.8-2	chr3	58209899	58210126	+	0.333333	NA	intron (NM_004944, intron 1 of 7)	intron (NM_004944, intron 1 of 7)	960	NM_004944	1776	Hs.476453	NM_004944	ENSG00000163687	DNASE1L3	DHP2|DNAS1L3|LSD|SLEB16	deoxyribonuclease 1 like 3	protein-coding
42.6667-3	chr18	75738925	75739128	+	0.333333	NA	Intergenic	L1ME1|LINE|L1	-26623	NR_134646	100505853	Hs.146758	NR_134646	ENSG00000261194	LINC01898	-	long intergenic non-protein coding RNA 1898	ncRNA
44.5333-7	chr7	134030190	134030390	+	0.333333	NA	intron (NM_021807, intron 17 of 17)	L1MB7|LINE|L1	-97050	NM_144648	136332	Hs.149774	NM_144648	ENSG00000155530	LRGUK	CFAP246	leucine rich repeats and guanylate kinase domain containing	protein-coding
41.6667-7	chr7	51441124	51441284	+	0.333333	NA	Intergenic	L1MB8|LINE|L1	-47948	NR_157843	107986794		NR_157843		LOC107986794	-	uncharacterized LOC107986794	ncRNA
52.2666	chr10	28944288	28944493	+	0.333333	NA	Intergenic	L1MD2|LINE|L1	97982	NM_001278522	283080		NM_001278522		C10orf126	bA492M23.1	chromosome 10 open reading frame 126	protein-coding
50.0999	chr2	144942703	144942861	+	0.333333	NA	intron (NR_033870, intron 3 of 4)	intron (NR_033870, intron 3 of 4)	274815	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41	ncRNA
49.1667	chr11	103179960	103180197	+	0.333333	NA	intron (NM_001377, intron 39 of 88)	intron (NM_001377, intron 39 of 88)	70652	NM_001080463	79659	Hs.503721	NM_001377	ENSG00000187240	DYNC2H1	ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11	dynein cytoplasmic 2 heavy chain 1	protein-coding
99.3334	chr3	23317994	23318423	+	0.333333	NA	intron (NM_001370225, intron 3 of 5)	AluJb|SINE|Alu	114881	NM_152653	7325	Hs.475688	NM_152653	ENSG00000182247	UBE2E2	UBCH8	ubiquitin conjugating enzyme E2 E2	protein-coding
56.4999	chr1	25730810	25730988	+	0.333333	NA	intron (NM_020379, intron 2 of 11)	MIRb|SINE|MIR	-69294	NM_020451	57190	Hs.323396	NM_020451	ENSG00000162430	SELENON	CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1	selenoprotein N	protein-coding
44.6666	chr2	164243363	164243531	+	0.333333	NA	Intergenic	Tigger15a|DNA|TcMar-Tigger	325048	NM_001303422	2888	Hs.411881	NM_004490	ENSG00000115290	GRB14	-	growth factor receptor bound protein 14	protein-coding
26.6666	chr11	97017391	97017491	+	0.333333	NA	Intergenic	Intergenic	509016	NR_135097	105369443	Hs.599377	NR_135097	ENSG00000256684	LINC02737	-	long intergenic non-protein coding RNA 2737	ncRNA
47.5333-3	chr19	3758830	3758993	+	0.333333	NA	intron (NM_004886, intron 3 of 10)	MER58B|DNA|hAT-Charlie	2781	NM_004886	9546	Hs.25527	NM_004886	ENSG00000011132	APBA3	MGC:15815|X11L2|mint3	amyloid beta precursor protein binding family A member 3	protein-coding
84.5666	chr5	28182462	28182896	+	0.333333	NA	Intergenic	L1ME3A|LINE|L1	104986	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
67.1333	chr11	26763296	26763602	+	0.333333	NA	Intergenic	Intergenic	-41389	NM_178498	159963	Hs.148907	NM_178498	ENSG00000148942	SLC5A12	SMCT2	solute carrier family 5 member 12	protein-coding
126.733	chr7	72762081	72762461	+	0.333333	NA	intron (NM_001145440, intron 7 of 13)	MER101-int|LTR|ERV1	64368	NR_039794	100616331		NR_039794	ENSG00000264494	MIR4650-2	-	microRNA 4650-2	ncRNA
53.4-2	chr2	29886986	29887288	+	0.333333	NA	intron (NM_004304, intron 1 of 28)	MLT1H1|LTR|ERVL-MaLR	34449	NM_004304	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	ALK receptor tyrosine kinase	protein-coding
89.8334	chr5	10616019	10616440	+	0.333333	NA	intron (NM_001164440, intron 1 of 3)	intron (NM_001164440, intron 1 of 3)	52159	NM_001164440	651746	Hs.26039	NM_001164440	ENSG00000164236	ANKRD33B	-	ankyrin repeat domain 33B	protein-coding
31.6666	chr1	97700541	97700684	+	0.333333	NA	intron (NM_000110, intron 5 of 22)	L1MEg1|LINE|L1	-96309	NR_046591	100873933	Hs.568669	NR_046591	ENSG00000235777	DPYD-AS2	-	DPYD antisense RNA 2	ncRNA
31.8666-5	chr2	225983326	225983456	+	0.333333	NA	Intergenic	L1MB7|LINE|L1	-159403	NR_046102	646736	Hs.712836	NR_046102		LOC646736	-	uncharacterized LOC646736	ncRNA
31.9-7	chr8	133509060	133509202	+	0.333333	NA	intron (NM_003033, intron 2 of 8)	intron (NM_003033, intron 2 of 8)	62756	NM_003033	6482	Hs.374257	NM_003033	ENSG00000008513	ST3GAL1	Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	protein-coding
45.9333-2	chr2	183520022	183520229	+	0.333333	NA	Intergenic	Intergenic	395682	NM_138285	129401	Hs.180591	NM_138285	ENSG00000163002	NUP35	MP-44|MP44|NP44|NUP53	nucleoporin 35	protein-coding
47.2-3	chr2	77425674	77425835	+	0.333333	NA	intron (NR_146416, intron 1 of 1)	L2b|LINE|L2	96622	NM_024993	80059	Hs.285782	NM_024993	ENSG00000176204	LRRTM4	-	leucine rich repeat transmembrane neuronal 4	protein-coding
85.3333	chr3	42087616	42087937	+	0.333333	NA	intron (NM_001349245, intron 1 of 15)	intron (NM_001349245, intron 1 of 15)	576	NR_146089	22906	Hs.535711	NM_014965	ENSG00000182606	TRAK1	EIEE68|MILT1|OIP106	trafficking kinesin protein 1	protein-coding
58.5333	chr1	161784070	161784358	+	0.333333	NA	intron (NM_007348, intron 4 of 15)	intron (NM_007348, intron 4 of 15)	17894	NM_007348	22926	Hs.492740	NM_007348	ENSG00000118217	ATF6	ACHM7|ATF6A	activating transcription factor 6	protein-coding
79.1666-2	chr14	20495816	20496229	+	0.333333	NA	Intergenic	Intergenic	-14450	NM_001012975	338879	Hs.451057	NM_001012975	ENSG00000182545	RNASE10	RAH1|RNASE9	ribonuclease A family member 10 (inactive)	protein-coding
43.1333-3	chr12	58509362	58509679	+	0.333333	NA	Intergenic	MLT1F1|LTR|ERVL-MaLR	-82182	NR_126341	100506869	Hs.290456	NR_126341	ENSG00000258231	LOC100506869	-	uncharacterized LOC100506869	ncRNA
37.1333-2	chr10	56804172	56804661	+	0.3	NA	Intergenic	MER54B|LTR|ERVL	-443143	NM_032997	11130	Hs.591363	NM_007057	ENSG00000122952	ZWINT	HZwint-1|KNTC2AP|SIP30|ZWINT1	ZW10 interacting kinetochore protein	protein-coding
56.0333-2	chr6	106787942	106788404	+	0.3	NA	promoter-TSS (NR_033557)	promoter-TSS (NR_033557)	-632	NR_033557	100422737	Hs.634681	NR_015365	ENSG00000235142	LINC02532	-	long intergenic non-protein coding RNA 2532	ncRNA
39.6-6	chr8	48769141	48769296	+	0.3	NA	Intergenic	L1MD1|LINE|L1	-33907	NR_157026	79645	Hs.23245	NM_024593	ENSG00000034239	EFCAB1	-	EF-hand calcium binding domain 1	protein-coding
46.5334	chr2	39751269	39751655	+	0.3	NA	intron (NM_001321475, intron 8 of 10)	intron (NM_001321475, intron 8 of 10)	27796	NM_025264	80745	Hs.468254	NM_025264	ENSG00000138050	THUMPD2	C2orf8	THUMP domain containing 2	protein-coding
57.3333	chr2	74167686	74168068	+	0.3	NA	intron (NM_001317112, intron 2 of 4)	AluJr|SINE|Alu	10437	NM_001317111	55233	Hs.602092	NM_018221	ENSG00000114978	MOB1A	C2orf6|MATS1|MOB1|MOBK1B|MOBKL1B|Mob4B	MOB kinase activator 1A	protein-coding
55.0667-4	chr5	118038411	118038641	+	0.3	NA	intron (NR_104997, intron 2 of 2)	intron (NR_104997, intron 2 of 2)	-244048	NR_104609	100505811	Hs.369776	NR_104609	ENSG00000250427	LINC02148	HNCAT21	long intergenic non-protein coding RNA 2148	ncRNA
89.8	chr1	170496283	170496625	+	0.3	NA	intron (NR_125958, intron 1 of 2)	AluSx|SINE|Alu	-35668	NM_152281	92344	Hs.183702	NM_152281	ENSG00000120370	GORAB	GO|NTKLBP1|SCYL1BP1	golgin, RAB6 interacting	protein-coding
44.9667	chr11	28732354	28732556	+	0.3	NA	Intergenic	Intergenic	-254907	NR_107035	102466876		NR_107035	ENSG00000273912	MIR8068	hsa-mir-8068	microRNA 8068	ncRNA
45.3-5	chr7	117442740	117442968	+	0.3	NA	Intergenic	Intergenic	-15361	NM_001301821	136991	Hs.352412	NM_130768	ENSG00000154438	ASZ1	ALP1|ANKL1|C7orf7|CT1.19|GASZ|Orf3	ankyrin repeat, SAM and basic leucine zipper domain containing 1	protein-coding
42.9667-5	chr6	39163708	39163967	+	0.3	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-48651	NM_001304793	55776	Hs.58382	NM_018322	ENSG00000112167	SAYSD1	C6orf64	SAYSVFN motif domain containing 1	protein-coding
75.3001	chr15	60923787	60924247	+	0.3	NA	intron (NM_134261, intron 1 of 10)	intron (NM_134261, intron 1 of 10)	242448	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA
69.1	chr3	24482865	24483176	+	0.3	NA	intron (NM_001354709, intron 1 of 10)	intron (NM_001354709, intron 1 of 10)	-11067	NR_046244	644990	Hs.631912	NR_046244		THRB-AS1	-	THRB antisense RNA 1	ncRNA
49.6333-3	chr3	21872668	21872869	+	0.3	NA	Intergenic	Intergenic	-84371	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
91.5	chr5	21584110	21584631	+	0.3	NA	intron (NR_027026, intron 4 of 4)	intron (NR_027026, intron 4 of 4)	124890	NR_027026	728411	Hs.88181	NM_207331	ENSG00000183666	GUSBP1	-	GUSB pseudogene 1	pseudo
71	chr19	27742586	27742954	+	0.3	NA	Intergenic	HSAT4|Satellite|centr	-50661	NR_110691	101927151	Hs.567934	NR_110687	ENSG00000267575	LOC101927151	-	uncharacterized LOC101927151	ncRNA
36.4-9	chr4	59653718	59653934	+	0.3	NA	Intergenic	Intergenic	640253	NR_133942	105377247	Hs.298228	NR_133941	ENSG00000251266	LINC02429	-	long intergenic non-protein coding RNA 2429	ncRNA
78.7667	chr12	125286772	125287080	+	0.3	NA	intron (NM_001366854, intron 1 of 8)	AluSx|SINE|Alu	-39690	NM_052907	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding
60.8334	chr1	169939695	169939958	+	0.3	NA	intron (NM_014970, intron 19 of 19)	L2-3_Crp|LINE|L2	-45867	NM_181093	57147	Hs.435560	NM_020423	ENSG00000000457	SCYL3	PACE-1|PACE1	SCY1 like pseudokinase 3	protein-coding
53.3-2	chr11	10275218	10275509	+	0.3	NA	intron (NM_030962, intron 1 of 39)	intron (NM_030962, intron 1 of 39)	18844	NM_030962	81846	Hs.577252	NM_030962	ENSG00000133812	SBF2	CMT4B2|DENND7B|MTMR13	SET binding factor 2	protein-coding
70.0333	chr11	19103032	19103488	+	0.3	NA	Intergenic	Intergenic	-13885	NM_001001483	54503	Hs.188569	NM_019028	ENSG00000177054	ZDHHC13	HIP14L|HIP3RP	zinc finger DHHC-type containing 13	protein-coding
49.3	chr2	207819837	207820122	+	0.3	NA	Intergenic	Intergenic	-50073	NM_003468	7855	Hs.17631	NM_003468	ENSG00000163251	FZD5	C2orf31|HFZ5	frizzled class receptor 5	protein-coding
50.3666-2	chr7	63915841	63916141	+	0.3	NA	Intergenic	Intergenic	-82815	NR_145488	100419780	Hs.742917	NR_145488		ZNF722P	ZNF722	zinc finger protein 722, pseudogene	pseudo
106.533	chr5	28534177	28534570	+	0.3	NA	Intergenic	L1M2|LINE|L1	-246708	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
36.2667-6	chr5	45134934	45135092	+	0.3	NA	Intergenic	MER34B|LTR|ERV1	326066	NM_016640	10884	Hs.124165	NM_016640	ENSG00000112996	MRPS30	MRP-S30|PAP|PDCD9|S30mt	mitochondrial ribosomal protein S30	protein-coding
57.5-3	chr21	27108904	27109160	+	0.3	NA	Intergenic	L1MA8|LINE|L1	-141944	NM_007038	11096	Hs.58324	NM_007038	ENSG00000154736	ADAMTS5	ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2	ADAM metallopeptidase with thrombospondin type 1 motif 5	protein-coding
54.4667-2	chr3	4537213	4537581	+	0.3	NA	intron (NM_001168272, intron 4 of 60)	L1MEd|LINE|L1	44049	NM_001168272	3708	Hs.567295	NM_002222	ENSG00000150995	ITPR1	ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29	inositol 1,4,5-trisphosphate receptor type 1	protein-coding
22.1-12	chr7	141016324	141016430	+	0.3	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-1425	NM_053035	51650	Hs.416207	NM_016071	ENSG00000090263	MRPS33	CGI-139|MRP-S33|PTD003|S33mt	mitochondrial ribosomal protein S33	protein-coding
46.2333	chr7	94249029	94249276	+	0.3	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	143040	NR_147206	101927525	Hs.571263	NR_147206		COL1A2-AS1	TCONS_00013888|lncRNA8975-1	COL1A2 antisense RNA 1	ncRNA
36.3-6	chr2	78774364	78774516	+	0.3	NA	Intergenic	Intergenic	228909	NR_136312	105374820	Hs.570225	NR_136311		LOC105374820	-	uncharacterized LOC105374820	ncRNA
42.7333	chr1	68282567	68282749	+	0.3	NA	Intergenic	Intergenic	-50112	NM_001193334	79971	Hs.647659	NM_024911	ENSG00000116729	WLS	C1orf139|EVI|GPR177|MRP|mig-14	Wnt ligand secretion mediator	protein-coding
80.2	chr19	29409410	29409941	+	0.3	NA	intron (NR_040029, intron 3 of 9)	L2c|LINE|L2	116077	NR_040029	284395	Hs.631601	NR_040029	ENSG00000264515	LOC284395	-	uncharacterized LOC284395	ncRNA
62.3	chr1	108971325	108971617	+	0.3	NA	exon (NM_001142550, exon 15 of 15)	exon (NM_001142550, exon 15 of 15)	-7972	NM_015127	23155	Hs.658489	NM_015127	ENSG00000121940	CLCC1	MCLC	chloride channel CLIC like 1	protein-coding
60.8	chr2	48936178	48936581	+	0.3	NA	Intergenic	Intergenic	-123224	NR_107011	102465854		NR_107011	ENSG00000212036	MIR548BA	hsa-mir-548ba	microRNA 548ba	ncRNA
90.9	chr22	19556795	19557426	+	0.3	NA	Intergenic	AluJr|SINE|Alu	9729	NR_024381	150185	Hs.719752	NR_024381		LINC00895	-	long intergenic non-protein coding RNA 895	ncRNA
47.3-3	chr12	26242016	26242300	+	0.3	NA	Intergenic	MIR|SINE|MIR	46585	NM_005086	8082	Hs.183428	NM_005086	ENSG00000123096	SSPN	DAGA5|KRAG|NSPN|SPN1|SPN2	sarcospan	protein-coding
31.8-4	chr12	30225618	30225856	+	0.3	NA	Intergenic	Charlie15b|DNA|hAT-Charlie	-440978	NM_175861	83857	Hs.401954	NM_031920	ENSG00000133687	TMTC1	ARG99|OLF|TMTC1A	transmembrane O-mannosyltransferase targeting cadherins 1	protein-coding
51-2	chr18	63802709	63802914	+	0.3	NA	intron (NM_001040147, intron 7 of 7)	intron (NM_001040147, intron 7 of 7)	25034	NM_001261830	8710	Hs.138202	NM_003784	ENSG00000166396	SERPINB7	MEGSIN|PPKN|TP55	serpin family B member 7	protein-coding
26.7667-5	chr12	38976016	38976107	+	0.3	NA	Intergenic	MIRc|SINE|MIR	-70470	NM_153634	144402	Hs.40910	NM_153634	ENSG00000139117	CPNE8	-	copine 8	protein-coding
48.1-4	chr5	81768169	81768500	+	0.3	NA	Intergenic	Intergenic	-17081	NM_001256734	23635	Hs.102735	NM_012446	ENSG00000145687	SSBP2	HSPC116|SOSS-B2	single stranded DNA binding protein 2	protein-coding
37.5333	chr1	55864211	55864374	+	0.3	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	80671	NR_147162	105378739	Hs.98895	NR_147162	ENSG00000230250	LINC01753	-	long intergenic non-protein coding RNA 1753	ncRNA
55.8667	chr18	2725038	2725270	+	0.3	NA	intron (NM_015295, intron 21 of 47)	intron (NM_015295, intron 21 of 47)	69267	NM_015295	23347	Hs.8118	NM_015295	ENSG00000101596	SMCHD1	BAMS|FSHD2	structural maintenance of chromosomes flexible hinge domain containing 1	protein-coding
55.1334-2	chrX	40706853	40707185	+	0.3	NA	intron (NM_004229, intron 10 of 30)	FLAM_C|SINE|Alu	-28377	NM_001289773	100873985	Hs.460579	NM_001289773		MED14OS	MED14-AS1	MED14 opposite strand	protein-coding
75.8666	chr8	131138768	131139045	+	0.3	NA	Intergenic	Intergenic	-97997	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
53.9	chr2	22671365	22671623	+	0.3	NA	Intergenic	MIR|SINE|MIR	135015	NR_110577	102723362	Hs.502887	NR_110577	ENSG00000233587	LINC01884	-	long intergenic non-protein coding RNA 1884	ncRNA
70.9	chr14	61241171	61241714	+	0.3	NA	Intergenic	MER21B|LTR|ERVL	39896	NM_001017970	161291	Hs.146180	NM_001017970	ENSG00000182107	TMEM30B	CDC50B	transmembrane protein 30B	protein-coding
56.1-2	chr14	60182434	60182922	+	0.3	NA	Intergenic	L1MC4a|LINE|L1	-12814	NM_001322280	51635	Hs.59719	NM_016029	ENSG00000100612	DHRS7	CGI-86|SDR34C1|retDSR4|retSDR4	dehydrogenase/reductase 7	protein-coding
48.1334	chr17	47162206	47162413	+	0.3	NA	intron (NR_148340, intron 2 of 16)	L2|LINE|L2	26986	NR_148340	996	Hs.463295	NM_001256	ENSG00000004897	CDC27	ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2	cell division cycle 27	protein-coding
52.9-4	chr9	115209950	115210280	+	0.3	NA	intron (NR_163556, intron 1 of 7)	intron (NR_163556, intron 1 of 7)	68297	NR_163556	50514	Hs.148841	NM_017418	ENSG00000173077	DEC1	CTS9	deleted in esophageal cancer 1	ncRNA
58.5667	chr11	94907334	94907586	+	0.3	NA	Intergenic	Intergenic	66096	NM_016403	51503	Hs.503597	NM_016403	ENSG00000150316	CWC15	AD002|C11orf5|Cwf15|HSPC148|ORF5	CWC15 spliceosome associated protein homolog	protein-coding
51.4666-4	chr8	51601161	51601455	+	0.3	NA	intron (NM_144651, intron 2 of 22)	L1PA16|LINE|L1	208137	NM_144651	137902	Hs.444882	NM_144651	ENSG00000147485	PXDNL	PMR1|PRM1|VPO2	peroxidasin like	protein-coding
38.6-9	chr3	22038261	22038406	+	0.3	NA	Intergenic	MIR|SINE|MIR	81194	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
66.4667-2	chr3	170982140	170982597	+	0.3	NA	Intergenic	AluJb|SINE|Alu	44352	NM_000340	6514	Hs.167584	NM_000340	ENSG00000163581	SLC2A2	GLUT2	solute carrier family 2 member 2	protein-coding
24.9667-2	chr11	11426000	11426093	+	0.3	NA	intron (NM_001363464, intron 3 of 9)	intron (NM_001363464, intron 3 of 9)	-72796	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding
39.9667-3	chr2	43309710	43309872	+	0.3	NA	intron (NM_001083953, intron 31 of 37)	L1MB7|LINE|L1	82580	NR_027251	100129726	Hs.194480	NM_178529	ENSG00000279873	LINC01126	-	long intergenic non-protein coding RNA 1126	ncRNA
52.6-2	chr18	61125766	61126013	+	0.3	NA	Intergenic	Intergenic	-207541	NM_031891	28316	Hs.671510	NM_031891	ENSG00000101542	CDH20	CDH7L3|Cdh7	cadherin 20	protein-coding
39	chr1	8944270	8944559	+	0.3	NA	Intergenic	AluJb|SINE|Alu	-1454	NM_001270500	765	Hs.100322	NM_001215	ENSG00000131686	CA6	CA-VI|GUSTIN	carbonic anhydrase 6	protein-coding
65.0333-2	chr8	129427670	129427898	+	0.3	NA	intron (NR_130920, intron 1 of 3)	L1PB1|LINE|L1	56358	NR_037457	100500839		NR_037457	ENSG00000263763	MIR3686	-	microRNA 3686	ncRNA
45.3	chr1	69757761	69758038	+	0.3	NA	intron (NM_001366839, intron 3 of 25)	L2a|LINE|L2	-161423	NR_023916	5301	Hs.654711	NR_023916	ENSG00000229359	PIN1P1	PIN1L	peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1	pseudo
73.1	chr1	119930068	119930495	+	0.3	NA	intron (NM_024408, intron 22 of 33)	intron (NM_024408, intron 22 of 33)	-33766	NM_021794	11085	Hs.283011	NM_021794	ENSG00000134249	ADAM30	svph4	ADAM metallopeptidase domain 30	protein-coding
65.7666-2	chr5	111762061	111762567	+	0.3	NA	intron (NM_001142474, intron 2 of 3)	L2c|LINE|L2	-4096	NM_001142476	9315	Hs.36053	NM_004772	ENSG00000134986	NREP	C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17	neuronal regeneration related protein	protein-coding
62.6-4	chr9	32017426	32017859	+	0.3	NA	Intergenic	Intergenic	-366961	NM_001278352	48	Hs.567229	NM_002197	ENSG00000122729	ACO1	ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1	aconitase 1	protein-coding
41.7-3	chr2	125535120	125535426	+	0.3	NA	Intergenic	Intergenic	582712	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
71.5667	chr20	41921124	41921486	+	0.3	NA	Intergenic	MLT1F1|LTR|ERVL-MaLR	-302928	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding
41.5-5	chr6	143833999	143834243	+	0.3	NA	Intergenic	AluJo|SINE|Alu	-9152	NM_001329953	84946	Hs.185675	NM_032860	ENSG00000135521	LTV1	C6orf93|dJ468K18.4	LTV1 ribosome biogenesis factor	protein-coding
42.8-4	chr5	60265473	60265956	+	0.3	NA	intron (NM_001364599, intron 1 of 16)	intron (NM_001364599, intron 1 of 16)	106949	NM_001364600	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
42.4334	chr14	40271509	40271724	+	0.3	NA	Intergenic	L1MC5a|LINE|L1	-683095	NR_109757	644919	Hs.434414	NR_109757		LINC02315	-	long intergenic non-protein coding RNA 2315	ncRNA
60.3333	chr2	53138229	53138627	+	0.3	NA	Intergenic	Intergenic	-435813	NR_039630	100616431		NR_039630	ENSG00000264975	MIR4431	-	microRNA 4431	ncRNA
49-8	chr4	112301336	112301657	+	0.3	NA	intron (NM_001102406, intron 1 of 15)	intron (NM_001102406, intron 1 of 15)	4127	NM_001102406	80216	Hs.652825	NM_025144	ENSG00000073331	ALPK1	8430410J10Rik|LAK	alpha kinase 1	protein-coding
59.8	chr7	107482927	107483312	+	0.3	NA	intron (NM_181733, intron 6 of 20)	intron (NM_181733, intron 6 of 20)	13062	NM_005295	2845	Hs.657277	NM_005295	ENSG00000172209	GPR22	-	G protein-coupled receptor 22	protein-coding
72.7-2	chr7	125492485	125492799	+	0.3	NA	Intergenic	Intergenic	-228351	NR_110182	101928254	Hs.571236	NR_110182	ENSG00000219445	LOC101928254	-	uncharacterized LOC101928254	ncRNA
65.7	chr1	52925855	52926220	+	0.3	NA	Intergenic	Intergenic	-1192	NM_001330587	6342	Hs.476365	NM_002979	ENSG00000116171	SCP2	NLTP|NSL-TP|SCP-2|SCP-CHI|SCP-X|SCPX	sterol carrier protein 2	protein-coding
75.8334	chr14	62897017	62897463	+	0.3	NA	intron (NM_139318, intron 7 of 10)	intron (NM_139318, intron 7 of 10)	148218	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
80.7334	chr9	26719502	26719952	+	0.3	NA	Intergenic	HAL1b|LINE|L1	173075	NM_024828	79886	Hs.178357	NM_024828	ENSG00000120159	CAAP1	C9orf82|CAAP	caspase activity and apoptosis inhibitor 1	protein-coding
43.4-5	chr8	28118518	28118740	+	0.3	NA	intron (NM_018091, intron 7 of 14)	intron (NM_018091, intron 7 of 14)	25490	NM_001284220	55140	Hs.491336	NM_018091	ENSG00000134014	ELP3	KAT9	elongator acetyltransferase complex subunit 3	protein-coding
39.1	chr14	32011555	32012029	+	0.3	NA	Intergenic	MIR3|SINE|MIR	64907	NR_027263	84837	Hs.496755	NM_032751		ARHGAP5-AS1	C14orf128	ARHGAP5 antisense RNA 1 (head to head)	ncRNA
47.4	chr16	78278991	78279168	+	0.3	NA	TTS (NR_120436)	TTS (NR_120436)	179425	NM_001291997	51741	Hs.461453	NM_016373	ENSG00000186153	WWOX	D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1	WW domain containing oxidoreductase	protein-coding
81.2667	chr10	64512581	64513001	+	0.3	NA	Intergenic	MER92-int|LTR|ERV1	-312737	NR_001446	305	Hs.591361	NR_001446		ANXA2P3	ANX2L3|ANX2P3|LIP2|LPC2C	annexin A2 pseudogene 3	pseudo
42.3333	chr2	58933990	58934191	+	0.3	NA	intron (NR_033873, intron 6 of 13)	intron (NR_033873, intron 6 of 13)	-283618	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
67.7667	chr3	42458411	42458821	+	0.3	NA	Intergenic	Tigger2|DNA|TcMar-Tigger	-30683	NM_001251882	7433	Hs.348500	NM_004624	ENSG00000114812	VIPR1	HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R	vasoactive intestinal peptide receptor 1	protein-coding
52.4-2	chr10	128804344	128804588	+	0.3	NA	Intergenic	Intergenic	-108367	NR_148990	728327	Hs.454452	NR_148990	ENSG00000224190	LINC02667	-	long intergenic non-protein coding RNA 2667	ncRNA
90.7668	chr6	122474837	122475283	+	0.3	NA	intron (NM_181794, intron 1 of 6)	AluSx3|SINE|Alu	3143	NM_181794	5570	Hs.741340	NM_032471	ENSG00000135549	PKIB	PRKACN2	cAMP-dependent protein kinase inhibitor beta	protein-coding
38.1333-6	chr6	130532718	130532890	+	0.3	NA	Intergenic	Intergenic	95687	NM_052913	114801	Hs.591341	NM_052913	ENSG00000164484	TMEM200A	KIAA1913|TTMA|TTMC	transmembrane protein 200A	protein-coding
46.9-3	chr4	62577777	62578045	+	0.3	NA	Intergenic	Tigger17a|DNA|TcMar-Tigger	-416146	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
26.6-15	chr7	7760742	7760895	+	0.3	NA	intron (NM_001302350, intron 3 of 4)	intron (NM_001302350, intron 3 of 4)	-42211	NM_002947	6119	Hs.487540	NM_002947	ENSG00000106399	RPA3	REPA3|RP-A p14	replication protein A3	protein-coding
21.4667-6	chr2	2306120	2306214	+	0.3	NA	intron (NM_015025, intron 1 of 24)	intron (NM_015025, intron 1 of 24)	-13065	NR_024468	730811	Hs.629472	NR_024468	ENSG00000225619	MYT1L-AS1	-	MYT1L antisense RNA 1	ncRNA
69.4	chr3	35493780	35494074	+	0.3	NA	Intergenic	Intergenic	-99904	NR_110817	101928135	Hs.550715	NR_110817		LOC101928135	-	uncharacterized LOC101928135	ncRNA
46.7666	chr17	55064091	55064291	+	0.3	NA	intron (NM_178509, intron 12 of 17)	intron (NM_178509, intron 12 of 17)	-95406	NM_001162861	1353	Hs.591171	NM_004375	ENSG00000166260	COX11	COX11P	cytochrome c oxidase copper chaperone COX11	protein-coding
53.0333	chr1	88979752	88979953	+	0.3	NA	3' UTR (NM_001162536, exon 3 of 3)	3' UTR (NM_001162536, exon 3 of 3)	12777	NM_001008661	56267	Hs.481898	NM_001008661	ENSG00000137944	KYAT3	CCBL2|KAT3|KATIII	kynurenine aminotransferase 3	protein-coding
27.8667-6	chr20	47733197	47733330	+	0.3	NA	intron (NM_198596, intron 3 of 20)	Tigger18a|DNA|TcMar-Tigger	52801	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding
67.8001-2	chr4	47216503	47216863	+	0.3	NA	intron (NM_000812, intron 4 of 8)	intron (NM_000812, intron 4 of 8)	185116	NM_000812	2560	Hs.27283	NM_000812	ENSG00000163288	GABRB1	EIEE45	gamma-aminobutyric acid type A receptor beta1 subunit	protein-coding
39.4333-4	chr16	54915045	54915498	+	0.3	NA	Intergenic	L1MA6|LINE|L1	13507	NR_110454	643911	Hs.237396	NM_001308963		CRNDE	CRNDEP|LINC00180|NCRNA00180|PNAS-108|lincIRX5	colorectal neoplasia differentially expressed	protein-coding
50.8-3	chrX	150564762	150564931	+	0.3	NA	Intergenic	L1ME1|LINE|L1	-3751	NM_000252	4534	Hs.655056	NM_000252	ENSG00000171100	MTM1	CNM|MTMX|XLMTM	myotubularin 1	protein-coding
55.3666	chr4	27899231	27899643	+	0.3	NA	Intergenic	L1MB4|LINE|L1	681958	NR_125921	101929199	Hs.570815	NR_125921	ENSG00000249699	LINC02261	-	long intergenic non-protein coding RNA 2261	ncRNA
93.1	chr12	54863972	54864480	+	0.3	NA	Intergenic	Intergenic	9710	NM_058173	118430	Hs.348419	NM_058173	ENSG00000172551	MUCL1	SBEM	mucin like 1	protein-coding
52.7	chr2	78936601	78936821	+	0.3	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-88991	NM_001270040	130120	Hs.447084	NM_198448	ENSG00000143954	REG3G	LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429	regenerating family member 3 gamma	protein-coding
25.2-11	chr20	14247442	14247572	+	0.3	NA	intron (NM_001351663, intron 3 of 17)	intron (NM_001351663, intron 3 of 17)	90105	NM_198391	23767	Hs.41296	NM_013281	ENSG00000125848	FLRT3	HH21	fibronectin leucine rich transmembrane protein 3	protein-coding
54.2-4	chr15	68467709	68467898	+	0.3	NA	Intergenic	MER5A|DNA|hAT-Charlie	-35640	NM_001004439	22801	Hs.436416	NM_012211	ENSG00000137809	ITGA11	HsT18964	integrin subunit alpha 11	protein-coding
52.6	chr16	12418767	12419054	+	0.3	NA	intron (NM_032167, intron 18 of 20)	L2c|LINE|L2	-301411	NR_039869	100616195		NR_039869	ENSG00000264733	MIR4718	-	microRNA 4718	ncRNA
48.3-2	chr3	76168768	76169079	+	0.3	NA	Intergenic	L2c|LINE|L2	-383374	NM_001324026	100131827	Hs.556877	NM_001128223	ENSG00000227124	ZNF717	OB1|X17|ZNF838	zinc finger protein 717	protein-coding
69.9332	chr4	60911432	60911853	+	0.3	NA	Intergenic	Intergenic	-10977	NR_039652	100616450		NR_039652	ENSG00000265829	MIR548AG1	-	microRNA 548ag-1	ncRNA
21.2-2	chr1	97212312	97212402	+	0.3	NA	intron (NM_000110, intron 19 of 22)	L1MB8|LINE|L1	116434	NR_046590	100873932	Hs.682651	NR_046590	ENSG00000232878	DPYD-AS1	-	DPYD antisense RNA 1	ncRNA
60.9	chr4	52098891	52099441	+	0.3	NA	Intergenic	Intergenic	47862	NM_145263	132671	Hs.527090	NM_145263	ENSG00000163071	SPATA18	Mieap|SPETEX1	spermatogenesis associated 18	protein-coding
45.5333	chr12	43277643	43277934	+	0.3	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	122473	NR_146866	105369740	Hs.577746	NR_146866	ENSG00000258331	LINC02461	-	long intergenic non-protein coding RNA 2461	ncRNA
33.7-11	chr4	120994342	120994543	+	0.3	NA	Intergenic	MSTB1|LTR|ERVL-MaLR	-71576	NM_018699	11107	Hs.666782	NM_018699	ENSG00000138738	PRDM5	BCS2|PFM2	PR/SET domain 5	protein-coding
71.6	chr17	71842011	71842290	+	0.3	NA	Intergenic	Intergenic	183829	NR_110876	102723505	Hs.547482	NR_110876		ROCR	LINC02095	regulator of chondrogenesis RNA	ncRNA
68.3333	chr8	122882046	122882405	+	0.3	NA	intron (NM_001362797, intron 3 of 4)	intron (NM_001362797, intron 3 of 4)	100570	NM_001362797	22882	Hs.377090	NM_014943	ENSG00000178764	ZHX2	AFR1|RAF	zinc fingers and homeoboxes 2	protein-coding
31.0333-7	chr6	62278228	62278467	+	0.3	NA	intron (NR_146874, intron 1 of 13)	intron (NR_146874, intron 1 of 13)	7878	NR_146873	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
94.5999	chr3	133024782	133025363	+	0.3	NA	Intergenic	Intergenic	-13216	NM_023943	66000	Hs.191616	NM_023943	ENSG00000144868	TMEM108	CT124|RTLN	transmembrane protein 108	protein-coding
30.4333-6	chr4	47230020	47230188	+	0.3	NA	intron (NM_000812, intron 4 of 8)	intron (NM_000812, intron 4 of 8)	198537	NM_000812	2560	Hs.27283	NM_000812	ENSG00000163288	GABRB1	EIEE45	gamma-aminobutyric acid type A receptor beta1 subunit	protein-coding
60.8667-2	chr4	178155716	178156152	+	0.3	NA	Intergenic	L1PB3|LINE|L1	-247998	NR_108092	101928656	Hs.508131	NR_108092	ENSG00000251504	LINC01099	-	long intergenic non-protein coding RNA 1099	ncRNA
58.0333-2	chr6	5036004	5036669	+	0.3	NA	intron (NR_126018, intron 1 of 1)	intron (NR_126018, intron 1 of 1)	6364	NR_126018	100129461	Hs.131700	NR_126015	ENSG00000272142	LYRM4-AS1	-	LYRM4 antisense RNA 1	ncRNA
54.1667	chr4	174600430	174600709	+	0.3	NA	Intergenic	Intergenic	-77671	NM_001145816	3248	Hs.596913	NM_000860	ENSG00000164120	HPGD	15-PGDH|PGDH|PGDH1|PHOAR1|SDR36C1	15-hydroxyprostaglandin dehydrogenase	protein-coding
39.5667-5	chr6	57156202	57156462	+	0.3	NA	intron (NM_015555, intron 12 of 13)	intron (NM_015555, intron 12 of 13)	15881	NR_110742	101927211	Hs.705718	NR_110742		ZNF451-AS1	-	ZNF451 regulatory antisense RNA 1	ncRNA
41.1	chr2	102823983	102824216	+	0.3	NA	Intergenic	Intergenic	62068	NM_144632	130827	Hs.436203	NM_144632	ENSG00000170417	TMEM182	-	transmembrane protein 182	protein-coding
78.5	chr5	57984677	57985233	+	0.3	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-85793	NR_109900	101928539	Hs.639385	NR_109900	ENSG00000249584	LINC02225	-	long intergenic non-protein coding RNA 2225	ncRNA
60.5	chr11	86740496	86740772	+	0.3	NA	Intergenic	Intergenic	-50437	NM_001293180	11098	Hs.25338	NM_007173	ENSG00000150687	PRSS23	SIG13|SPUVE|ZSIG13	serine protease 23	protein-coding
69.9333	chr1	168017501	168017903	+	0.3	NA	intron (NM_001198956, intron 11 of 21)	intron (NM_001198956, intron 11 of 21)	19042	NR_031702	100313835		NR_031702	ENSG00000221545	MIR1255B2	MIR1255B-2|MIRN1255B2|hsa-mir-1255b-2	microRNA 1255b-2	ncRNA
45.3667-3	chr8	29703685	29703914	+	0.3	NA	Intergenic	HAL1|LINE|L1	44310	NR_026765	619351	Hs.566911	NR_026765	ENSG00000251191	LINC00589	C8orf75|TSLNC8	long intergenic non-protein coding RNA 589	ncRNA
93.6666	chr21	15617750	15618419	+	0.3	NA	Intergenic	Intergenic	-111850	NM_001283041	29761	Hs.743994	NM_013396	ENSG00000155313	USP25	USP21	ubiquitin specific peptidase 25	protein-coding
58.6666	chr5	22407049	22407337	+	0.3	NA	intron (NM_004061, intron 2 of 14)	L2|LINE|L2	-193343	NM_001364107	1010	Hs.113684	NM_004061	ENSG00000154162	CDH12	CDHB	cadherin 12	protein-coding
39.8333-3	chr2	183689608	183689837	+	0.3	NA	Intergenic	L1MA2|LINE|L1	565279	NM_138285	129401	Hs.180591	NM_138285	ENSG00000163002	NUP35	MP-44|MP44|NP44|NUP53	nucleoporin 35	protein-coding
35-4	chr13	44212927	44213101	+	0.3	NA	Intergenic	MER102a|DNA|hAT-Charlie	-16814	NR_107046	102465876		NR_107046	ENSG00000276319	MIR8079	hsa-mir-8079	microRNA 8079	ncRNA
68.1667	chr8	135023958	135024255	+	0.3	NA	Intergenic	Intergenic	174171	NR_125427	101927845	Hs.559609	NR_125427	ENSG00000251218	LOC101927845	-	uncharacterized LOC101927845	ncRNA
30.9-6	chr12	94942257	94942441	+	0.3	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	61348	NM_018838	55967	Hs.506374	NM_018838	ENSG00000184752	NDUFA12	B17.2|DAP13|MC1DN23	NADH:ubiquinone oxidoreductase subunit A12	protein-coding
52.7-4	chr8	127017625	127017965	+	0.3	NA	intron (NR_045262, intron 1 of 1)	MIRb|SINE|MIR	4641	NR_045262	100750225	Hs.571530	NR_045262	ENSG00000253438	PCAT1	PCA1|PCAT-1	prostate cancer associated transcript 1	ncRNA
53.8667	chr1	195333218	195333492	+	0.3	NA	Intergenic	L1MD|LINE|L1	755360	NR_146895	105371673		NR_146895		LINC01724	-	long intergenic non-protein coding RNA 1724	ncRNA
46.1-2	chr2	180134879	180135045	+	0.3	NA	Intergenic	Intergenic	-127665	NM_020943	57703	Hs.311363	NM_020943	ENSG00000163510	CWC22	EIF4GL|NCM|fSAPb	CWC22 spliceosome associated protein homolog	protein-coding
26.1333	chr1	61599505	61599594	+	0.3	NA	Intergenic	L1M4c|LINE|L1	-54693	NR_073400	414927	Hs.123471	NR_073400		MGC34796	-	sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) pseudogene	pseudo
33.4-3	chr16	13813004	13813172	+	0.3	NA	Intergenic	Intergenic	-107069	NM_005236	2072	Hs.567265	NM_005236	ENSG00000175595	ERCC4	ERCC11|FANCQ|RAD1|XFEPS|XPF	ERCC excision repair 4, endonuclease catalytic subunit	protein-coding
47.8-5	chr7	7916401	7916725	+	0.3	NA	Intergenic	L2b|LINE|L2	52189	NR_110018	100505921	Hs.634989	NR_110018		LOC100505921	-	uncharacterized LOC100505921	ncRNA
48.7-2	chr6	121495115	121495320	+	0.3	NA	Intergenic	Intergenic	59571	NM_000165	2697	Hs.74471	NM_000165	ENSG00000152661	GJA1	AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA	gap junction protein alpha 1	protein-coding
30.7-7	chr2	168630532	168630649	+	0.3	NA	intron (NM_001256126, intron 3 of 10)	intron (NM_001256126, intron 3 of 10)	47647	NR_039933	100616356		NR_039933	ENSG00000265694	MIR4774	-	microRNA 4774	ncRNA
61.5667	chr1	81000089	81000431	+	0.3	NA	Intergenic	Intergenic	-305932	NM_001366003	23266	Hs.24212	NM_012302	ENSG00000117114	ADGRL2	CIRL2|CL2|LEC1|LPHH1|LPHN2	adhesion G protein-coupled receptor L2	protein-coding
28-8	chr8	129214790	129214958	+	0.3	NA	Intergenic	L2c|LINE|L2	26366	NR_033916	728724	Hs.49902	NR_033916	ENSG00000229140	LINC00977	-	long intergenic non-protein coding RNA 977	ncRNA
50.8	chr17	59518216	59518498	+	0.3	NA	intron (NR_110813, intron 1 of 2)	intron (NR_110813, intron 1 of 2)	8500	NR_110813	101927728	Hs.569720	NR_110813	ENSG00000265313	LINC01476	-	long intergenic non-protein coding RNA 1476	ncRNA
78.6-2	chr4	94454825	94455186	+	0.3	NA	intron (NM_001011516, intron 1 of 9)	intron (NM_001011516, intron 1 of 9)	3063	NM_001256427	10611	Hs.480311	NM_006457	ENSG00000163110	PDLIM5	ENH|ENH1|L9|LIM	PDZ and LIM domain 5	protein-coding
46.4	chr1	207093164	207093481	+	0.3	NA	intron (NM_001017365, intron 4 of 6)	intron (NM_001017365, intron 4 of 6)	4039	NM_001017367	725	Hs.99886	NM_000716	ENSG00000123843	C4BPB	C4BP	complement component 4 binding protein beta	protein-coding
32.3667-3	chr2	169340417	169340601	+	0.3	NA	intron (NM_004525, intron 1 of 78)	MLT1J|LTR|ERVL-MaLR	22025	NM_004525	4036	Hs.657729	NM_004525	ENSG00000081479	LRP2	DBS|GP330|LRP-2	LDL receptor related protein 2	protein-coding
72.0334	chr14	60902847	60903194	+	0.3	NA	intron (NM_001177963, intron 6 of 6)	L1M4|LINE|L1	78059	NM_001350254	57570	Hs.380159	NM_020810	ENSG00000126814	TRMT5	COXPD26|KIAA1393|TRM5	tRNA methyltransferase 5	protein-coding
61.2333	chr1	173807568	173807861	+	0.3	NA	intron (NM_001171182, intron 2 of 4)	L2a|LINE|L2	16418	NM_001171182	91687	Hs.531856	NM_033319	ENSG00000120334	CENPL	C1orf155|CENP-L|dJ383J4.3	centromere protein L	protein-coding
59.8666	chr11	81203345	81203641	+	0.3	NA	Intergenic	Intergenic	-440690	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
48.7-3	chr9	75139754	75140278	+	0.3	NA	intron (NM_012383, intron 8 of 9)	L1ME3G|LINE|L1	51502	NM_012383	26578	Hs.494192	NM_012383	ENSG00000134996	OSTF1	OSF|SH3P2|bA235O14.1	osteoclast stimulating factor 1	protein-coding
61.8667	chr2	78769235	78769596	+	0.3	NA	Intergenic	Intergenic	223884	NR_136312	105374820	Hs.570225	NR_136311		LOC105374820	-	uncharacterized LOC105374820	ncRNA
94.5333	chr2	189349107	189349622	+	0.3	NA	Intergenic	Intergenic	-92069	NM_001303096	84128	Hs.399984	NM_032168	ENSG00000115368	WDR75	NET16|UTP17	WD repeat domain 75	protein-coding
40.6667	chr1	99635539	99635686	+	0.3	NA	intron (NR_031666, intron 1 of 4)	intron (NR_031666, intron 1 of 4)	-10501	NM_017734	54873	Hs.483993	NM_017734	ENSG00000099260	PALMD	C1orf11|PALML	palmdelphin	protein-coding
61.5	chr1	94604592	94604939	+	0.3	NA	Intergenic	Intergenic	61063	NR_162147	113219466		NR_162147		MIR12133	-	microRNA 12133	ncRNA
31.2333-7	chr9	128178358	128178489	+	0.3	NA	exon (NM_001131018, exon 9 of 17)	exon (NM_001131018, exon 9 of 17)	13149	NM_001131017	25792	Hs.212395	NM_012127	ENSG00000148337	CIZ1	LSFR1|NP94|ZNF356	CDKN1A interacting zinc finger protein 1	protein-coding
59	chr3	37058148	37058555	+	0.3	NA	intron (NM_006309, intron 25 of 27)	intron (NM_006309, intron 25 of 27)	65001	NM_001354623	4292	Hs.195364	NM_000249	ENSG00000076242	MLH1	COCA2|FCC2|HNPCC|HNPCC2|hMLH1	mutL homolog 1	protein-coding
47.1-4	chr2	119151806	119152234	+	0.3	NA	Intergenic	MIRb|SINE|MIR	6731	NM_182528	165257	Hs.433493	NM_182528	ENSG00000144119	C1QL2	C1QTNF10|CTRP10	complement C1q like 2	protein-coding
72.2334	chr4	12271608	12272016	+	0.3	NA	Intergenic	Intergenic	48361	NR_125910	101929019	Hs.434234	NR_125910	ENSG00000251210	LINC02270	-	long intergenic non-protein coding RNA 2270	ncRNA
50.0667	chr20	38737332	38737561	+	0.3	NA	Intergenic	AluSp|SINE|Alu	-11014	NM_024855	79913	Hs.371585	NM_024855	ENSG00000101442	ACTR5	Arp5|INO80M	actin related protein 5	protein-coding
60.1333-2	chr18	51956894	51957168	+	0.3	NA	Intergenic	PABL_B-int|LTR|ERV1	-383166	NM_005215	1630	Hs.162025	NM_005215	ENSG00000187323	DCC	CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1	DCC netrin 1 receptor	protein-coding
37.9-5	chr5	25524414	25524559	+	0.3	NA	Intergenic	Intergenic	333533	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
43.4334	chr10	69960495	69960685	+	0.3	NA	Intergenic	ORSL|DNA|hAT-Tip100	-92256	NM_018649	55506	Hs.499953	NM_018649	ENSG00000099284	H2AFY2	macroH2A2	H2A histone family member Y2	protein-coding
35.0667	chr11	40509761	40510006	+	0.3	NA	intron (NM_020929, intron 2 of 4)	intron (NM_020929, intron 2 of 4)	-216753	NR_047673	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
77.8	chr8	87126540	87127004	+	0.3	NA	intron (NM_173538, intron 4 of 10)	L1ME1|LINE|L1	260357	NM_173538	168975	Hs.246284	NM_173538	ENSG00000176571	CNBD1	-	cyclic nucleotide binding domain containing 1	protein-coding
34.9-4	chr8	128290727	128290848	+	0.3	NA	Intergenic	Intergenic	140671	NR_031613	100302281		NR_031613	ENSG00000221261	MIR1208	MIRN1208|hsa-mir-1208	microRNA 1208	ncRNA
52.6667-5	chr6	158850322	158850749	+	0.3	NA	intron (NR_028496, intron 2 of 2)	intron (NR_028496, intron 2 of 2)	7097	NR_028496	202459	Hs.487035	NM_145303	ENSG00000243775	OSTCP1	DC2L|OSTCL	oligosaccharyltransferase complex subunit pseudogene 1	pseudo
53.9-2	chr5	10895199	10895546	+	0.3	NA	Intergenic	AluSx3|SINE|Alu	-134138	NM_001291963	1611	Hs.75189	NM_004394	ENSG00000112977	DAP	-	death associated protein	protein-coding
56.0999	chr11	43539984	43540280	+	0.3	NA	Intergenic	Intergenic	-19524	NR_031577	100313777		NR_031577	ENSG00000211568	MIR670	hsa-mir-670	microRNA 670	ncRNA
64.7333	chr13	101785530	101785884	+	0.3	NA	intron (NM_175929, intron 3 of 4)	intron (NM_175929, intron 3 of 4)	130938	NM_004115	2259	Hs.508616	NM_004115	ENSG00000102466	FGF14	FGF-14|FHF-4|FHF4|SCA27	fibroblast growth factor 14	protein-coding
49.6666-2	chr20	54793816	54794084	+	0.3	NA	Intergenic	L1PREC2|LINE|L1	318357	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
73-3	chr8	137839579	137839897	+	0.3	NA	intron (NR_161374, intron 2 of 7)	intron (NR_161374, intron 2 of 7)	243807	NR_161374	401478	Hs.654931	NM_001354876		LOC401478	-	uncharacterized LOC401478	ncRNA
49.7666-2	chr8	124185082	124185572	+	0.3	NA	Intergenic	Intergenic	-13805	NR_103547	157376	Hs.662360	NM_182525	ENSG00000253868	FER1L6-AS2	C8orf78	FER1L6 antisense RNA 2	ncRNA
36.2-6	chr3	104280328	104280502	+	0.3	NA	Intergenic	MER101-int|LTR|ERV1	-756299	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
49-4	chr17	70673938	70674184	+	0.3	NA	Intergenic	Intergenic	504526	NM_000891	3759	Hs.1547	NM_000891	ENSG00000123700	KCNJ2	ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3	potassium voltage-gated channel subfamily J member 2	protein-coding
55.2-6	chr9	137596613	137597025	+	0.3	NA	Intergenic	L1PA14|LINE|L1	-6307	NM_138462	116225	Hs.128096	NM_138462	ENSG00000165724	ZMYND19	MIZIP	zinc finger MYND-type containing 19	protein-coding
43.9333-4	chr14	64580067	64580270	+	0.3	NA	intron (NM_172365, intron 8 of 11)	AluJb|SINE|Alu	30207	NM_172365	145376	Hs.144696	NM_172365	ENSG00000165807	PPP1R36	C14orf50	protein phosphatase 1 regulatory subunit 36	protein-coding
77.5	chr1	163587218	163587572	+	0.3	NA	Intergenic	MARNA|DNA|TcMar-Mariner	-164204	NR_104294	100422212	Hs.556898	NR_104294		LOC100422212	-	eukaryotic translation initiation factor 3 subunit J pseudogene	pseudo
32.8-8	chr3	95835555	95835745	+	0.3	NA	Intergenic	PRIMA4_LTR|LTR|ERV1	-152457	NR_077228	100287639	Hs.591320	NR_077228	ENSG00000244681	MTHFD2P1	-	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1	pseudo
94.1	chr7	11952147	11952665	+	0.3	NA	Intergenic	Tigger9b|DNA|TcMar-Tigger	-120208	NM_015204	221981	Hs.120855	NM_015204	ENSG00000005108	THSD7A	-	thrombospondin type 1 domain containing 7A	protein-coding
80.0667	chr6	139789851	139790233	+	0.3	NA	intron (NR_038399, intron 1 of 2)	L1ME1|LINE|L1	18969	NR_038399	100132735	Hs.62646	NR_038399	ENSG00000231426	FILNC1	-	FOXO induced long non-coding RNA 1	ncRNA
79.8666	chr2	54179216	54179629	+	0.3	NA	intron (NM_138448, intron 3 of 3)	MER41A|LTR|ERV1	56139	NM_001320588	98	Hs.516173	NM_138448	ENSG00000170634	ACYP2	ACYM|ACYP	acylphosphatase 2	protein-coding
59.1	chr3	80529329	80529553	+	0.3	NA	Intergenic	L1M4|LINE|L1	-235456	NR_147143	105377175	Hs.180696	NR_147143	ENSG00000242781	LINC02050	-	long intergenic non-protein coding RNA 2050	ncRNA
34.1-8	chrX	46938424	46938585	+	0.3	NA	intron (NM_014735, intron 1 of 10)	L1MEf|LINE|L1	26083	NM_014735	9767	Hs.371977	NM_014735	ENSG00000102221	JADE3	JADE-3|PHF16	jade family PHD finger 3	protein-coding
49.7	chr14	38319930	38320244	+	0.3	NA	Intergenic	L1MA9|LINE|L1	-63994	NM_175060	161198	Hs.525307	NM_175060	ENSG00000176435	CLEC14A	C14orf27|CEG1|EGFR-5	C-type lectin domain containing 14A	protein-coding
44.5-3	chr5	116199445	116199617	+	0.3	NA	intron (NM_001308080, intron 5 of 6)	intron (NM_001308080, intron 5 of 6)	-56212	NR_162144	113219464		NR_162144		MIR12130	-	microRNA 12130	ncRNA
44.2-4	chr8	69388525	69388824	+	0.3	NA	Intergenic	L1MEg2|LINE|L1	59570	NR_110433	100505739	Hs.127115	NR_110433		LINC01603	-	long intergenic non-protein coding RNA 1603	ncRNA
58.7666	chr1	191102567	191103032	+	0.3	NA	Intergenic	Intergenic	125699	NR_146892	105371660	Hs.127094	NR_146892	ENSG00000233882	LINC01680	-	long intergenic non-protein coding RNA 1680	ncRNA
35.3667-8	chr8	125099923	125100085	+	0.3	NA	intron (NM_001349485, intron 1 of 6)	L2a|LINE|L2	8144	NM_173685	286053	Hs.388297	NM_173685	ENSG00000156831	NSMCE2	C8orf36|MMS21|NSE2|ZMIZ7	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase	protein-coding
49.1-3	chr8	131736423	131736679	+	0.3	NA	Intergenic	MIRb|SINE|MIR	-167542	NR_136615	23167	Hs.204564	NM_015137	ENSG00000132294	EFR3A	-	EFR3 homolog A	protein-coding
49.1334-3	chr13	91013042	91013484	+	0.3	NA	Intergenic	L1MEd|LINE|L1	76354	NR_104057	101930747	Hs.112745	NR_104057		LINC00380	-	long intergenic non-protein coding RNA 380	ncRNA
39.6667	chr1	203066944	203067298	+	0.3	NA	intron (NM_001304331, intron 25 of 29)	L2a|LINE|L2	-16674	NR_160550	114004358		NR_160550		MYOPARR	-	myogenin promoter associated myogenic regulatory antisense long non coding RNA	ncRNA
39.4-6	chr19	33440736	33440961	+	0.3	NA	intron (NM_001166056, intron 7 of 12)	L2a|LINE|L2	66324	NM_001252296	1054	Hs.429666	NM_001806	ENSG00000153879	CEBPG	GPE1BP|IG/EBP-1	CCAAT enhancer binding protein gamma	protein-coding
47.2-7	chr7	21872838	21873053	+	0.3	NA	intron (NM_001277115, intron 73 of 81)	intron (NM_001277115, intron 73 of 81)	72954	NM_018719	55536	Hs.744069	NM_018719	ENSG00000164649	CDCA7L	JPO2|R1|RAM2	cell division cycle associated 7 like	protein-coding
52.1	chr8	19177091	19177333	+	0.3	NA	Intergenic	Intergenic	68310	NR_038919	100128993	Hs.697742	NR_038919		LOC100128993	-	uncharacterized LOC100128993	ncRNA
39.1667-6	chr8	34290606	34290766	+	0.3	NA	Intergenic	Intergenic	-493235	NR_125746	103689844	Hs.590682	NR_125746	ENSG00000254344	LINC01288	TCONS_00014671	long intergenic non-protein coding RNA 1288	ncRNA
82.4	chr13	90548090	90548456	+	0.3	NA	Intergenic	THE1B-int|LTR|ERVL-MaLR	54985	NR_120414	101927224	Hs.385801	NR_120414		LINC01049	-	long intergenic non-protein coding RNA 1049	ncRNA
72.4666	chr10	98396960	98397523	+	0.3	NA	intron (NM_032709, intron 6 of 15)	intron (NM_032709, intron 6 of 15)	-1934	NR_031619	100302133		NR_031619	ENSG00000284415	MIR1287	MIRN1287|hsa-mir-1287|mir-1287	microRNA 1287	ncRNA
87.7334	chr6	161859945	161860375	+	0.3	NA	intron (NM_004562, intron 6 of 11)	intron (NM_004562, intron 6 of 11)	389183	NR_134594	105378098	Hs.691066	NR_134593		LOC105378098	-	uncharacterized LOC105378098	ncRNA
63.8999	chr5	177291213	177291506	+	0.3	NA	intron (NM_172349, intron 22 of 23)	intron (NM_172349, intron 22 of 23)	12360	NM_001031677	53917	Hs.16258	NM_130781	ENSG00000169228	RAB24	-	RAB24, member RAS oncogene family	protein-coding
60.3666	chr14	42950668	42951142	+	0.3	NA	Intergenic	L1PA16|LINE|L1	1344049	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
63.2667	chr11	42512460	42512679	+	0.3	NA	Intergenic	AluSc|SINE|Alu	-258879	NR_038309	100507205	Hs.99310	NR_038309		LINC02740	-	long intergenic non-protein coding RNA 2740	ncRNA
36.1-5	chr8	56645737	56645979	+	0.3	NA	Intergenic	Intergenic	-86035	NR_038236	100507632	Hs.583755	NR_038236	ENSG00000246430	LINC00968	-	long intergenic non-protein coding RNA 968	ncRNA
49-10	chr6	3998299	3998579	+	0.3	NA	Intergenic	Intergenic	-22861	NR_146784	8899	Hs.159014	NM_003913	ENSG00000112739	PRPF4B	PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1	pre-mRNA processing factor 4B	protein-coding
40.6333-2	chr3	164985513	164985690	+	0.3	NA	intron (NM_001041, intron 45 of 47)	intron (NM_001041, intron 45 of 47)	92895	NM_001041	6476	Hs.429596	NM_001041	ENSG00000090402	SI	-	sucrase-isomaltase	protein-coding
87.3333	chr5	101538107	101538751	+	0.3	NA	Intergenic	L1PA13|LINE|L1	-635147	NM_175052	7903	Hs.308628	NM_005668	ENSG00000113532	ST8SIA4	PST|PST1|SIAT8D|ST8SIA-IV	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	protein-coding
64.5-2	chr14	30628152	30628465	+	0.3	NA	intron (NM_001283032, intron 2 of 23)	intron (NM_001283032, intron 2 of 23)	5989	NM_001257376	23256	Hs.369168	NM_016106	ENSG00000092108	SCFD1	C14orf163|RA410|SLY1|SLY1P|STXBP1L2	sec1 family domain containing 1	protein-coding
79.1666	chr11	134016237	134016676	+	0.3	NA	Intergenic	Intergenic	-15816	NR_027276	100128239	Hs.423734	NR_027276	ENSG00000204241	LINC02731	-	long intergenic non-protein coding RNA 2731	ncRNA
59.9666-3	chrX	98644527	98645189	+	0.3	NA	Intergenic	MIR|SINE|MIR	-1080323	NR_125391	10824	Hs.654372	NR_125391	ENSG00000236256	DIAPH2-AS1	EPAG	DIAPH2 antisense RNA 1	ncRNA
51.1333-3	chr4	163212931	163213131	+	0.3	NA	Intergenic	AluSx3|SINE|Alu	-46141	NM_001128931	92345	Hs.129095	NM_138386	ENSG00000145414	NAF1	-	nuclear assembly factor 1 ribonucleoprotein	protein-coding
81.2	chr10	55591556	55591923	+	0.3	NA	intron (NM_001354404, intron 2 of 34)	intron (NM_001354404, intron 2 of 34)	-7303	NM_001190478	100463289		NM_001190478	ENSG00000249860	MTRNR2L5	HN5	MT-RNR2 like 5	protein-coding
46.2666-2	chr8	125002120	125002398	+	0.3	NA	intron (NM_003129, intron 1 of 10)	intron (NM_003129, intron 1 of 10)	3754	NM_003129	6713	Hs.71465	NM_003129	ENSG00000104549	SQLE	-	squalene epoxidase	protein-coding
35.4667-2	chr10	53320223	53320429	+	0.3	NA	Intergenic	Intergenic	-548626	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
32.7667-5	chr2	134491805	134491926	+	0.3	NA	intron (NM_030923, intron 5 of 7)	intron (NM_030923, intron 5 of 7)	227135	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding
66.6999	chr1	192759999	192760463	+	0.3	NA	Intergenic	L1MC1|LINE|L1	43903	NR_039624	100616345		NR_039624	ENSG00000283795	MIR4426	-	microRNA 4426	ncRNA
31.6-4	chr4	163134694	163134871	+	0.3	NA	intron (NM_138386, intron 6 of 7)	intron (NM_138386, intron 6 of 7)	32108	NM_138386	92345	Hs.129095	NM_138386	ENSG00000145414	NAF1	-	nuclear assembly factor 1 ribonucleoprotein	protein-coding
63.7333	chr18	1842232	1842622	+	0.3	NA	Intergenic	L2a|LINE|L2	-482798	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
72.7	chr21	30815417	30815876	+	0.3	NA	Intergenic	Intergenic	-2372	NM_175857	337879	Hs.407655	NM_175857	ENSG00000183640	KRTAP8-1	KAP8.1	keratin associated protein 8-1	protein-coding
44.4-11	chr6	62885244	62885407	+	0.3	NA	Intergenic	Intergenic	434652	NM_001143940	51557	Hs.149585	NM_016571	ENSG00000146166	LGSN	GLULD1|LGS	lengsin, lens protein with glutamine synthetase domain	protein-coding
28.6333-2	chr1	177234435	177234656	+	0.3	NA	intron (NM_021165, intron 2 of 7)	intron (NM_021165, intron 2 of 7)	63587	NM_021165	57795	Hs.495918	NM_021165	ENSG00000198797	BRINP2	DBCCR1L2|FAM5B	BMP/retinoic acid inducible neural specific 2	protein-coding
60.8667	chr1	111506845	111507135	+	0.3	NA	intron (NM_001081976, intron 1 of 5)	(AT)n|Simple_repeat|Simple_repeat	-2869	NM_000677	140	Hs.281342	NM_000677	ENSG00000282608	ADORA3	A3AR	adenosine A3 receptor	protein-coding
77.5333-2	chr14	33214482	33215031	+	0.3	NA	intron (NM_001164749, intron 2 of 11)	intron (NM_001164749, intron 2 of 11)	275877	NM_001164749	64067	Hs.657892	NM_022123	ENSG00000151322	NPAS3	MOP6|PASD6|bHLHe12	neuronal PAS domain protein 3	protein-coding
33.3-6	chr8	119039911	119040052	+	0.3	NA	intron (NM_001324095, intron 3 of 7)	MLT1D|LTR|ERVL-MaLR	-27266	NM_006438	10584	Hs.176615	NM_006438	ENSG00000184374	COLEC10	3MC3|CL-34|CLL1	collectin subfamily member 10	protein-coding
62.9	chr8	63694526	63695147	+	0.3	NA	Intergenic	L1MB7|LINE|L1	-74594	NR_038875	286184	Hs.586402	NR_038875	ENSG00000253734	LINC01289	-	long intergenic non-protein coding RNA 1289	ncRNA
35.6-13	chr5	86091553	86091756	+	0.3	NA	Intergenic	Intergenic	-190790	NR_003719	285622	Hs.449272	NR_003719		NBPF22P	-	NBPF member 22, pseudogene	pseudo
90.4	chr2	211610054	211610544	+	0.3	NA	intron (NM_001042599, intron 19 of 26)	intron (NM_001042599, intron 19 of 26)	816061	NR_031643	100313771		NR_031643	ENSG00000221782	MIR548F2	MIR548F-2|MIRN548F2|hsa-mir-548f-2	microRNA 548f-2	ncRNA
50.3334-2	chr16	73696667	73696872	+	0.3	NA	Intergenic	Intergenic	309964	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA
90	chr2	46616390	46617104	+	0.3	NA	promoter-TSS (NM_014171)	promoter-TSS (NM_014171)	294	NM_002643	5281	Hs.468415	NM_002643	ENSG00000151665	PIGF	-	phosphatidylinositol glycan anchor biosynthesis class F	protein-coding
41.9333-2	chr14	43786898	43787411	+	0.3	NA	Intergenic	L1ME3A|LINE|L1	720129	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
82.5333	chr8	115089775	115090093	+	0.3	NA	Intergenic	L1MC1|LINE|L1	578079	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
54-2	chr4	142761149	142761348	+	0.3	NA	intron (NM_001331040, intron 1 of 25)	intron (NM_001331040, intron 1 of 25)	85287	NM_001331040	8821	Hs.176376	NM_003866	ENSG00000109452	INPP4B	-	inositol polyphosphate-4-phosphatase type II B	protein-coding
24.3-18	chr8	115524820	115524972	+	0.3	NA	intron (NM_001282902, intron 4 of 5)	intron (NM_001282902, intron 4 of 5)	143117	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
62.9333	chr14	28024164	28024583	+	0.3	NA	Intergenic	Intergenic	-351152	NR_148991	728755	Hs.652058	NR_148991	ENSG00000258932	LOC728755	-	uncharacterized LOC728755	ncRNA
53.6999	chr1	167746601	167746817	+	0.3	NA	intron (NM_024569, intron 1 of 4)	intron (NM_024569, intron 1 of 4)	24727	NM_003953	9019	Hs.493919	NM_003953	ENSG00000197965	MPZL1	MPZL1b|PZR|PZR1b|PZRa|PZRb	myelin protein zero like 1	protein-coding
51.2-2	chr16	67773167	67773465	+	0.3	NA	intron (NM_001320238, intron 1 of 12)	MSTB|LTR|ERVL-MaLR	33244	NM_001320240	57610	Hs.368569	NM_020850	ENSG00000141084	RANBP10	-	RAN binding protein 10	protein-coding
83.0999	chr7	89035245	89035646	+	0.3	NA	intron (NM_181646, intron 1 of 3)	intron (NM_181646, intron 1 of 3)	-239708	NM_152706	219557	Hs.112877	NM_152706	ENSG00000164645	TEX47	C7orf62	testis expressed 47	protein-coding
57.3667	chr3	167080754	167081102	+	0.3	NA	Intergenic	Charlie24|DNA|hAT-Charlie	182245	NR_135545	105374194		NR_135545		LOC105374194	inv3q26.1	uncharacterized LOC105374194	ncRNA
75.3666	chr20	31608943	31609603	+	0.3	NA	Intergenic	MIRb|SINE|MIR	2087	NR_036161	100422904		NR_036161	ENSG00000264395	MIR3193	-	microRNA 3193	ncRNA
35.1666-2	chr3	11343158	11343312	+	0.3	NA	intron (NM_001349237, intron 11 of 17)	L1MC|LINE|L1	70838	NM_001349232	10533	Hs.38032	NM_006395	ENSG00000197548	ATG7	APG7-LIKE|APG7L|GSA7	autophagy related 7	protein-coding
62.1667	chr12	4815276	4815605	+	0.3	NA	intron (NM_002235, intron 1 of 1)	intron (NM_002235, intron 1 of 1)	6264	NM_002235	3742	Hs.306190	NM_002235	ENSG00000130035	KCNA6	HBK2|KV1.6|PPP1R96	potassium voltage-gated channel subfamily A member 6	protein-coding
44.6-4	chr2	124784268	124784621	+	0.3	NA	intron (NM_130773, intron 17 of 23)	intron (NM_130773, intron 17 of 23)	759157	NM_001367498	129684	Hs.660653	NM_130773	ENSG00000155052	CNTNAP5	caspr5	contactin associated protein like 5	protein-coding
51.6333	chr15	74715513	74715746	+	0.3	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	9899	NM_000499	1543	Hs.72912	NM_000499	ENSG00000140465	CYP1A1	AHH|AHRR|CP11|CYP1|CYPIA1|P1-450|P450-C|P450DX	cytochrome P450 family 1 subfamily A member 1	protein-coding
33.7-12	chr5	40725048	40725370	+	0.3	NA	intron (NM_012382, intron 4 of 4)	FLAM_C|SINE|Alu	30752	NM_012382	23548	Hs.348915	NM_012382	ENSG00000113638	TTC33	OSRF	tetratricopeptide repeat domain 33	protein-coding
55.3	chr1	177513320	177513584	+	0.3	NA	Intergenic	Intergenic	161866	NR_126001	102724661	Hs.146628	NR_126001		LINC01645	-	long intergenic non-protein coding RNA 1645	ncRNA
45.5-2	chr6	157922434	157922793	+	0.3	NA	intron (NM_016224, intron 10 of 17)	intron (NM_016224, intron 10 of 17)	-59250	NM_003898	8871	Hs.434494	NM_003898	ENSG00000078269	SYNJ2	INPP5H	synaptojanin 2	protein-coding
69.6667	chr17	63815436	63816089	+	0.3	NA	intron (NM_203499, intron 16 of 17)	intron (NM_203499, intron 16 of 17)	-11669	NM_002805	5705	Hs.79387	NM_002805	ENSG00000087191	PSMC5	S8|SUG-1|SUG1|TBP10|TRIP1|p45|p45/SUG	proteasome 26S subunit, ATPase 5	protein-coding
74.5333	chr14	48307424	48307890	+	0.3	NA	Intergenic	HERVL-int|LTR|ERVL	-512643	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
49.6-3	chr8	80803179	80803446	+	0.3	NA	intron (NM_001033723, intron 2 of 8)	L1PA11|LINE|L1	71156	NM_001367783	619279	Hs.434957	NM_032651	ENSG00000164684	ZNF704	Gig1	zinc finger protein 704	protein-coding
64.1666	chr12	14439912	14440200	+	0.3	NA	intron (NM_181352, intron 5 of 14)	intron (NM_181352, intron 5 of 14)	54775	NM_181352	55729	Hs.504856	NM_018179	ENSG00000171681	ATF7IP	AM|ATF-IP|MCAF|MCAF1|p621	activating transcription factor 7 interacting protein	protein-coding
39.3333-3	chr2	50185453	50185706	+	0.3	NA	intron (NM_001330093, intron 18 of 22)	MLT1J2|LTR|ERVL-MaLR	162175	NM_001330091	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
53.8666-2	chr5	7154398	7154679	+	0.3	NA	Intergenic	L1PA15-16|LINE|L1	114816	NR_039659	100616234		NR_039659	ENSG00000283468	MIR4454	-	microRNA 4454	ncRNA
48.0333	chr22	36009097	36009378	+	0.3	NA	intron (NM_001082578, intron 1 of 13)	intron (NM_001082578, intron 1 of 13)	19300	NM_001082579	23543	Hs.282998	NM_014309	ENSG00000100320	RBFOX2	FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh	RNA binding fox-1 homolog 2	protein-coding
41.3-5	chr4	36955893	36956118	+	0.3	NA	Intergenic	Intergenic	-45774	NR_134669	100508631	Hs.397553	NR_134669	ENSG00000261761	LINC02616	-	long intergenic non-protein coding RNA 2616	ncRNA
59.2333-3	chr8	115906042	115906311	+	0.3	NA	Intergenic	Intergenic	-237201	NM_014112	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
58.1	chr1	55286508	55286774	+	0.3	NA	Intergenic	Intergenic	61000	NR_039618	100616272		NR_039618	ENSG00000265822	MIR4422	mir-4422	microRNA 4422	ncRNA
66.5	chr7	31332090	31332322	+	0.3	NA	Intergenic	Intergenic	8520	NM_022728	63974	Hs.45152	NM_022728	ENSG00000164600	NEUROD6	Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2	neuronal differentiation 6	protein-coding
82.7667	chr2	43858364	43859189	+	0.3	NA	intron (NM_001357321, intron 6 of 12)	intron (NM_001357321, intron 6 of 12)	19805	NM_001357321	64241	Hs.413931	NM_022437	ENSG00000143921	ABCG8	GBD4|STSL	ATP binding cassette subfamily G member 8	protein-coding
46.1999	chr7	7825863	7826099	+	0.3	NA	intron (NM_001302350, intron 4 of 4)	MER2|DNA|TcMar-Tigger	-107374	NM_002947	6119	Hs.487540	NM_002947	ENSG00000106399	RPA3	REPA3|RP-A p14	replication protein A3	protein-coding
54.4-3	chr22	28262841	28263087	+	0.3	NA	intron (NM_001145418, intron 5 of 22)	intron (NM_001145418, intron 5 of 22)	-196905	NR_106713	102466081		NR_106713	ENSG00000276162	MIR5739	hsa-mir-5739	microRNA 5739	ncRNA
55.9333	chr8	110971585	110971891	+	0.3	NA	intron (NR_125417, intron 5 of 5)	intron (NR_125417, intron 5 of 5)	55695	NR_125417	101927459	Hs.575543	NR_125416	ENSG00000253877	LINC01608	-	long intergenic non-protein coding RNA 1608	ncRNA
110.1	chr15	91555494	91556060	+	0.3	NA	Intergenic	Intergenic	92438	NR_110106	101926928	Hs.638788	NR_110106	ENSG00000258551	CRAT37	-	cervical cancer-associated transcript 37	ncRNA
66.2334	chr8	67149195	67149539	+	0.3	NA	intron (NM_001363133, intron 15 of 27)	MLT1F1|LTR|ERVL-MaLR	65519	NM_001291339	79848	Hs.370147	NM_024790	ENSG00000104218	CSPP1	CSPP|JBTS21	centrosome and spindle pole associated protein 1	protein-coding
46.9667-2	chr15	70292075	70292300	+	0.3	NA	Intergenic	MIRb|SINE|MIR	-194270	NM_001282980	7090	Hs.287362	NM_005078	ENSG00000140332	TLE3	ESG|ESG3|GRG3|HsT18976	TLE family member 3, transcriptional corepressor	protein-coding
159.767	chr11	82736177	82737305	+	0.3	NA	Intergenic	Intergenic	-2877	NM_175885	220382	Hs.448218	NM_175885	ENSG00000182103	FAM181B	-	family with sequence similarity 181 member B	protein-coding
60.8001-2	chr6	41069187	41069409	+	0.3	NA	intron (NM_145063, intron 4 of 5)	LTR84b|LTR|ERVL	2542	NM_001329688	221443	Hs.227457	NM_145063	ENSG00000124596	OARD1	C6orf130|TARG1|dJ34B21.3	O-acyl-ADP-ribose deacylase 1	protein-coding
55.4667-3	chr6	160544990	160545211	+	0.3	NA	intron (NM_005577, intron 33 of 38)	intron (NM_005577, intron 33 of 38)	-33976	NR_028092	80350	Hs.654503	NM_024492	ENSG00000213071	LPAL2	APOA2|APOAL|APOARGC|apo(a)rg-C	lipoprotein(a) like 2, pseudogene	pseudo
27.7-2	chr1	204019346	204019527	+	0.3	NA	Intergenic	MLT1E1A|LTR|ERVL-MaLR	21828	NR_027902	284573	Hs.406979	NR_027902	ENSG00000176754	LINC00303	C1orf157|NCRNA00303	long intergenic non-protein coding RNA 303	ncRNA
47-3	chr5	29898280	29898519	+	0.3	NA	Intergenic	L1PA16|LINE|L1	17839	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
39.4333-2	chr10	84576788	84576962	+	0.3	NA	Intergenic	L1M4|LINE|L1	151706	NM_001284242	54462	Hs.461988	NM_018999	ENSG00000107771	CCSER2	FAM190B|Gcap14|KIAA1128|bA486O22.1	coiled-coil serine rich protein 2	protein-coding
69.7	chr5	128226324	128226584	+	0.3	NA	Intergenic	MSTC|LTR|ERVL-MaLR	142688	NM_001046	6558	Hs.162585	NM_001046	ENSG00000064651	SLC12A2	BSC|BSC2|NKCC1|PPP1R141	solute carrier family 12 member 2	protein-coding
46.2334-2	chr9	25361999	25362185	+	0.3	NA	Intergenic	L1MCb|LINE|L1	316766	NM_001004125	286319	Hs.26268	NM_001004125	ENSG00000198680	TUSC1	CCDC89B|TSG-9|TSG9	tumor suppressor candidate 1	protein-coding
20.4-11	chr5	104418958	104419069	+	0.3	NA	Intergenic	Intergenic	-680461	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
83.6	chr6	74089632	74090233	+	0.3	NA	intron (NR_110856, intron 1 of 3)	intron (NR_110856, intron 1 of 3)	20481	NR_110856	101928516	Hs.384600	NR_110856	ENSG00000223786	LOC101928516	-	uncharacterized LOC101928516	ncRNA
65.8667	chr20	5618771	5619115	+	0.3	NA	Intergenic	AluSz6|SINE|Alu	-7937	NM_019593	56261	Hs.636359	NM_019593	ENSG00000125772	GPCPD1	EDI3|GDE5|GDPD6|PREI4	glycerophosphocholine phosphodiesterase 1	protein-coding
54.6667-2	chr10	98929068	98929390	+	0.3	NA	intron (NM_021828, intron 3 of 11)	intron (NM_021828, intron 3 of 11)	-4661	NR_106762	102465253		NR_106762	ENSG00000274056	MIR6507	hsa-mir-6507	microRNA 6507	ncRNA
39.2-4	chr15	65653027	65653169	+	0.3	NA	intron (NM_001301033, intron 10 of 11)	intron (NM_001301033, intron 10 of 11)	10219	NM_001254740	9187	Hs.173092	NM_004727	ENSG00000074621	SLC24A1	CSNB1D|HsT17412|NCKX|NCKX1|RODX	solute carrier family 24 member 1	protein-coding
39.8	chr11	100237782	100237982	+	0.3	NA	intron (NM_001243270, intron 15 of 23)	intron (NM_001243270, intron 15 of 23)	-449406	NM_152432	143872	Hs.44004	NM_032021	ENSG00000165895	ARHGAP42	AD031|GRAF3|TMEM133	Rho GTPase activating protein 42	protein-coding
33.5334	chr2	217928023	217928191	+	0.266667	NA	intron (NM_022648, intron 1 of 32)	intron (NM_022648, intron 1 of 32)	-7871	NM_001308022	7145	Hs.471381	NM_022648	ENSG00000079308	TNS1	MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS	tensin 1	protein-coding
54.1001	chr9	76055233	76055568	+	0.266667	NA	intron (NR_120409, intron 5 of 19)	intron (NR_120409, intron 5 of 19)	164727	NM_006200	5125	Hs.368542	NM_006200	ENSG00000099139	PCSK5	PC5|PC6|PC6A|SPC6	proprotein convertase subtilisin/kexin type 5	protein-coding
27.6-19	chr9	86714098	86714255	+	0.266667	NA	Intergenic	Intergenic	233330	NM_002048	2619	Hs.65029	NM_002048	ENSG00000180447	GAS1	-	growth arrest specific 1	protein-coding
69.3334-2	chr2	33613933	33614325	+	0.266667	NA	Intergenic	HUERS-P1-int|LTR|ERV1	-14767	NM_001304538	25940	Hs.468140	NM_015475	ENSG00000119812	FAM98A	-	family with sequence similarity 98 member A	protein-coding
60-2	chr7	49297847	49298235	+	0.266667	NA	Intergenic	L1M4|LINE|L1	373494	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
46.2-4	chr2	135422736	135423026	+	0.266667	NA	intron (NM_001286569, intron 2 of 21)	MLT1C|LTR|ERVL-MaLR	107704	NM_001286568	84083	Hs.658422	NM_032143	ENSG00000121988	ZRANB3	4933425L19Rik|AH2	zinc finger RANBP2-type containing 3	protein-coding
61.8334	chr7	17282364	17282829	+	0.266667	NA	Intergenic	MIRb|SINE|MIR	-16056	NM_001621	196	Hs.171189	NM_001621	ENSG00000106546	AHR	RP85|bHLHe76	aryl hydrocarbon receptor	protein-coding
40-7	chr2	32507996	32508164	+	0.266667	NA	exon (NM_016252, exon 51 of 74)	exon (NM_016252, exon 51 of 74)	-24073	NR_030285	693143		NR_030285	ENSG00000207653	MIR558	MIRN558|hsa-mir-558	microRNA 558	ncRNA
37.3667-2	chr11	104675086	104675233	+	0.266667	NA	Intergenic	L1P4|LINE|L1	-65857	NR_120585	102723895	Hs.48803	NR_120585	ENSG00000256422	LINC02552	-	long intergenic non-protein coding RNA 2552	ncRNA
42.6666-3	chr16	68927512	68927816	+	0.266667	NA	exon (NM_024562, exon 13 of 18)	exon (NM_024562, exon 13 of 18)	84133	NM_024562	79613	Hs.13526	NM_024562	ENSG00000103047	TANGO6	TMCO7	transport and golgi organization 6 homolog	protein-coding
38.3001	chr5	137430444	137430602	+	0.266667	NA	intron (NM_004598, intron 2 of 10)	L2b|LINE|L2	68803	NM_004598	6695	Hs.596136	NM_004598	ENSG00000152377	SPOCK1	SPOCK|TESTICAN|TIC1	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1	protein-coding
70.0667	chr2	166152827	166153116	+	0.266667	NA	intron (NR_110260, intron 2 of 11)	MLT1J2|LTR|ERVL-MaLR	-3810	NM_001353958	6323	Hs.22654	NM_006920	ENSG00000144285	SCN1A	EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI	sodium voltage-gated channel alpha subunit 1	protein-coding
46.3001	chr1	109430289	109430556	+	0.266667	NA	Intergenic	Intergenic	-3974	NM_001199774	5686	Hs.485246	NM_002790	ENSG00000143106	PSMA5	PSC5|ZETA	proteasome subunit alpha 5	protein-coding
46.5333	chr10	99479683	99480078	+	0.266667	NA	Intergenic	L1PA16|LINE|L1	-49256	NM_002079	2805	Hs.500756	NM_002079	ENSG00000120053	GOT1	AST1|ASTQTL1|GIG18|cAspAT|cCAT	glutamic-oxaloacetic transaminase 1	protein-coding
54.2667	chr20	36116899	36117168	+	0.266667	NA	intron (NM_001258329, intron 2 of 22)	intron (NM_001258329, intron 2 of 22)	24323	NM_001258330	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding
34.6-10	chr3	107211748	107211971	+	0.266667	NA	intron (NR_028303, intron 1 of 3)	intron (NR_028303, intron 1 of 3)	28779	NR_028303	100302640	Hs.648607	NR_028303	ENSG00000242759	LINC00882	-	long intergenic non-protein coding RNA 882	ncRNA
79.3667	chr8	121824593	121824960	+	0.266667	NA	Intergenic	Intergenic	-183336	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
43.3667-3	chr5	74046764	74047203	+	0.266667	NA	Intergenic	Charlie2a|DNA|hAT-Charlie	233437	NM_001244364	64283	Hs.482521	NM_001080479	ENSG00000214944	ARHGEF28	RGNEF|RIP2|p190RHOGEF	Rho guanine nucleotide exchange factor 28	protein-coding
26.8-4	chr13	104008109	104008350	+	0.266667	NA	Intergenic	Intergenic	583029	NR_126374	104326190	Hs.334381	NR_126374	ENSG00000234551	LINC01309	TCONS_l2_00007459	long intergenic non-protein coding RNA 1309	ncRNA
54.1667-2	chr5	55287156	55287513	+	0.266667	NA	intron (NR_144323, intron 8 of 26)	AluSx|SINE|Alu	20360	NR_144323	54505	Hs.593268	NM_019030	ENSG00000067248	DHX29	DDX29	DExH-box helicase 29	protein-coding
48.6667	chr12	53484495	53484723	+	0.266667	NA	intron (NM_006301, intron 7 of 14)	intron (NM_006301, intron 7 of 14)	14849	NM_006301	7786	Hs.713539	NM_006301	ENSG00000139625	MAP3K12	DLK|MEKK12|MUK|ZPK|ZPKP1	mitogen-activated protein kinase kinase kinase 12	protein-coding
68.9668	chr10	52516538	52516871	+	0.266667	NA	Intergenic	Intergenic	-46171	NR_120641	101928687	Hs.380362	NR_120641	ENSG00000231131	LNCAROD	A-ROD|LINC01468|lnc-MBL2-4	lncRNA activating regulator of DKK1	ncRNA
72.9001	chr12	378761	379246	+	0.266667	NA	intron (NM_001042603, intron 3 of 27)	intron (NM_001042603, intron 3 of 27)	10317	NM_001042603	5927	Hs.76272	NM_005056	ENSG00000073614	KDM5A	RBBP-2|RBBP2|RBP2	lysine demethylase 5A	protein-coding
41.8666-3	chr13	87569481	87569769	+	0.266667	NA	intron (NR_033829, intron 1 of 5)	intron (NR_033829, intron 1 of 5)	49115	NR_039722	100616182		NR_039722	ENSG00000266052	MIR4500	-	microRNA 4500	ncRNA
58.8334-3	chr8	133731628	133731932	+	0.266667	NA	Intergenic	LTR38C|LTR|ERV1	45572	NR_125422	101927798	Hs.615036	NR_125422	ENSG00000253165	LOC101927798	-	uncharacterized LOC101927798	ncRNA
41-3	chr17	49629973	49630242	+	0.266667	NA	intron (NM_001007228, intron 1 of 9)	intron (NM_001007228, intron 1 of 9)	-3518	NM_001370732	8405	Hs.463382	NM_003563	ENSG00000121067	SPOP	BTBD32|TEF2	speckle type BTB/POZ protein	protein-coding
49.8-4	chr5	175260151	175260556	+	0.266667	NA	Intergenic	Intergenic	183829	NM_000794	1812	Hs.2624	NM_000794	ENSG00000184845	DRD1	DADR|DRD1A	dopamine receptor D1	protein-coding
48.9001	chr4	102705725	102705949	+	0.266667	NA	intron (NM_005908, intron 5 of 16)	L1MA6|LINE|L1	55131	NM_005908	4126	Hs.480415	NM_005908	ENSG00000109323	MANBA	MANB1	mannosidase beta	protein-coding
74.6668	chr10	43215002	43215303	+	0.266667	NA	intron (NM_145313, intron 1 of 12)	intron (NM_145313, intron 1 of 12)	14587	NM_001282862	221002	Hs.125293	NM_145313	ENSG00000198915	RASGEF1A	CG4853	RasGEF domain family member 1A	protein-coding
40.7999	chr10	77442141	77442422	+	0.266667	NA	intron (NM_001271519, intron 1 of 28)	intron (NM_001271519, intron 1 of 28)	91409	NR_126365	101929286	Hs.568867	NR_126365		KCNMA1-AS3	-	KCNMA1 antisense RNA 3	ncRNA
70.0001-2	chr2	15074901	15075340	+	0.266667	NA	Intergenic	L1ME4b|LINE|L1	442403	NR_144632	151354	Hs.260855	NM_145175	ENSG00000162981	LRATD1	FAM84A|NSE1|PP11517	LRAT domain containing 1	protein-coding
46.8-3	chr2	14894303	14894534	+	0.266667	NA	Intergenic	HAL1|LINE|L1	261701	NR_144632	151354	Hs.260855	NM_145175	ENSG00000162981	LRATD1	FAM84A|NSE1|PP11517	LRAT domain containing 1	protein-coding
60.4	chr5	124641543	124641848	+	0.266667	NA	intron (NM_020747, intron 6 of 8)	intron (NM_020747, intron 6 of 8)	103417	NM_020747	57507	Hs.266616	NM_020747	ENSG00000168916	ZNF608	NY-REN-36	zinc finger protein 608	protein-coding
46.9333-5	chr3	103005479	103005757	+	0.266667	NA	Intergenic	Intergenic	518498	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
63.4667-2	chr8	114374625	114374950	+	0.266667	NA	Intergenic	MSTD|LTR|ERVL-MaLR	-937848	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
48.5	chr17	77029417	77029711	+	0.266667	NA	Intergenic	L1ME4b|LINE|L1	-59079	NR_027058	654434	Hs.720923	NR_027058	ENSG00000234912	SNHG20	C17orf86|LINC00338|NCRNA00338|SCARNA16HG	small nucleolar RNA host gene 20	ncRNA
63.8667-2	chr4	30713972	30714288	+	0.266667	NA	Intergenic	Intergenic	-6239	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
52.9332	chr12	88274252	88274601	+	0.266667	NA	Intergenic	Intergenic	132119	NM_001366579	160418	Hs.331268	NM_181783	ENSG00000139324	TMTC3	LIS8|SMILE	transmembrane O-mannosyltransferase targeting cadherins 3	protein-coding
46.5332	chr2	134779613	134779994	+	0.266667	NA	Intergenic	Intergenic	-58813	NM_138326	130013	Hs.655728	NM_138326	ENSG00000153086	ACMSD	-	aminocarboxymuconate semialdehyde decarboxylase	protein-coding
56.8667-2	chr14	47490276	47490588	+	0.266667	NA	intron (NM_001113498, intron 1 of 16)	intron (NM_001113498, intron 1 of 16)	-147186	NR_103766	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
68.8334	chr3	16477480	16478206	+	0.266667	NA	intron (NM_015150, intron 2 of 9)	intron (NM_015150, intron 2 of 9)	35856	NM_015150	23180	Hs.98910	NM_015150	ENSG00000131378	RFTN1	MIG2|PIB10|PIG9|RAFTLIN	raftlin, lipid raft linker 1	protein-coding
79.0668	chr4	28144413	28144863	+	0.266667	NA	Intergenic	MLT1I|LTR|ERVL-MaLR	-674944	NR_036237	100422937		NR_036237	ENSG00000283275	MIR4275	-	microRNA 4275	ncRNA
45.0667-3	chrX	55924610	55924839	+	0.266667	NA	intron (NM_001324105, intron 1 of 5)	intron (NM_001324105, intron 1 of 5)	16439	NM_001324104	11279	Hs.646614	NM_007250	ENSG00000102349	KLF8	BKLF3|ZNF741	Kruppel like factor 8	protein-coding
39.2-2	chr1	211994837	211995012	+	0.266667	NA	intron (NM_015434, intron 7 of 19)	L1M6|LINE|L1	-40629	NM_001286229	51514	Hs.656473	NM_016448	ENSG00000143476	DTL	CDT2|DCAF2|L2DTL|RAMP	denticleless E3 ubiquitin protein ligase homolog	protein-coding
62.3-2	chr4	86179681	86180113	+	0.266667	NA	intron (NM_001318069, intron 3 of 13)	L1MA5A|LINE|L1	60091	NR_110879	101929064	Hs.662221	NR_110879	ENSG00000250062	LOC101929064	-	uncharacterized LOC101929064	ncRNA
23.5333-15	chr6	18750992	18751121	+	0.266667	NA	Intergenic	Intergenic	179272	NR_030312	693125		NR_030312	ENSG00000207775	MIR548A1	MIRN548A1	microRNA 548a-1	ncRNA
42.1334	chr3	168410158	168410630	+	0.266667	NA	intron (NR_021485, intron 3 of 15)	HAL1ME|LINE|L1	-141460	NR_030294	693136		NR_030294	ENSG00000207717	MIR551B	MIRN551B|mir-551b	microRNA 551b	ncRNA
30.5334	chr18	71964670	71964936	+	0.266667	NA	Intergenic	L1MCa|LINE|L1	-182577	NR_126324	102724913		NR_126324	ENSG00000265352	LINC01899	-	long intergenic non-protein coding RNA 1899	ncRNA
66.9334	chr10	54533074	54533354	+	0.266667	NA	intron (NM_001142771, intron 2 of 34)	MER6A|DNA|TcMar-Tigger	46984	NR_134503	105378311	Hs.623892	NR_134503	ENSG00000234173	LOC105378311	-	uncharacterized LOC105378311	ncRNA
42.6-3	chr2	13094632	13094949	+	0.266667	NA	Intergenic	Intergenic	-87777	NR_038434	100506474	Hs.242196	NR_038434	ENSG00000225649	LOC100506474	-	uncharacterized LOC100506474	ncRNA
40-8	chr22	47161857	47162087	+	0.266667	NA	intron (NM_001284305, intron 12 of 12)	intron (NM_001284305, intron 12 of 12)	-183599	NR_144462	339685	Hs.434351	NR_038922	ENSG00000224715	LOC339685	-	uncharacterized LOC339685	ncRNA
54.9333	chr5	41343997	41344636	+	0.266667	NA	intron (NM_001005473, intron 2 of 2)	intron (NM_001005473, intron 2 of 2)	-82847	NM_001115131	729	Hs.481992	NM_000065	ENSG00000039537	C6	-	complement C6	protein-coding
51.0667	chr1	188999899	189000133	+	0.266667	NA	Intergenic	AluSg|SINE|Alu	1475994	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
38.1667-3	chr17	55879035	55879291	+	0.266667	NA	Intergenic	L1M5|LINE|L1	128058	NM_001102402	58488	Hs.285218	NM_021213	ENSG00000141179	PCTP	PC-TP|STARD2	phosphatidylcholine transfer protein	protein-coding
67.9334	chr17	19784981	19785306	+	0.266667	NA	intron (NM_014683, intron 21 of 26)	intron (NM_014683, intron 21 of 26)	-36845	NM_000691	218	Hs.531682	NM_000691	ENSG00000108602	ALDH3A1	ALDH3|ALDHIII	aldehyde dehydrogenase 3 family member A1	protein-coding
15.2333-2	chr14	56279034	56279102	+	0.266667	NA	intron (NM_021255, intron 2 of 5)	intron (NM_021255, intron 2 of 5)	160657	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding
70.4001-2	chr6	105058922	105059353	+	0.266667	NA	intron (NM_001004317, intron 3 of 3)	L2|LINE|L2	77209	NM_147147	11149	Hs.221660	NM_007073	ENSG00000112276	BVES	CARICK|HBVES|LGMD2X|LGMDR25|POP1|POPDC1	blood vessel epicardial substance	protein-coding
26.8667-2	chr10	27579576	27579863	+	0.266667	NA	Intergenic	Intergenic	75415	NM_001256411	22931	Hs.406799	NM_021252	ENSG00000099246	RAB18	RAB18LI1|WARBM3	RAB18, member RAS oncogene family	protein-coding
59.4666	chr2	31627608	31627968	+	0.266667	NA	Intergenic	L1PA6|LINE|L1	-46850	NM_000348	6716	Hs.458345	NM_000348	ENSG00000277893	SRD5A2	-	steroid 5 alpha-reductase 2	protein-coding
30.0667-10	chr5	30594823	30595018	+	0.266667	NA	Intergenic	Intergenic	-598766	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
67.7332	chr13	58339357	58339779	+	0.266667	NA	Intergenic	L1MA1|LINE|L1	-106451	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA
36.7667-6	chr5	7644036	7644173	+	0.266667	NA	intron (NM_020546, intron 4 of 24)	intron (NM_020546, intron 4 of 24)	207029	NM_001089584	134121	Hs.709979	NM_001089584	ENSG00000215217	C5orf49	-	chromosome 5 open reading frame 49	protein-coding
27.4667-12	chr9	119850597	119850728	+	0.266667	NA	Intergenic	Intergenic	-84398	NR_132393	106146149	Hs.638938	NR_132393	ENSG00000261432	LINC01613	n341773	long intergenic non-protein coding RNA 1613	ncRNA
36.6333	chr11	115736029	115736217	+	0.266667	NA	Intergenic	Intergenic	-1361	NR_135066	101928985	Hs.398155	NR_135066		LOC101928985	-	uncharacterized LOC101928985	ncRNA
79.9	chr14	82098671	82099151	+	0.266667	NA	Intergenic	L1M5|LINE|L1	-355773	NR_146498	102724294		NR_146498	ENSG00000258718	LINC02311	-	long intergenic non-protein coding RNA 2311	ncRNA
65.0667	chr6	50288207	50288635	+	0.266667	NA	Intergenic	Intergenic	-238492	NM_001369057	245915	Hs.571092	NM_001037498	ENSG00000180872	DEFB112	DEFB-12	defensin beta 112	protein-coding
30.1-10	chr5	178638440	178638577	+	0.266667	NA	Intergenic	L1M5|LINE|L1	-11458	NM_020666	57396	Hs.406557	NM_020666	ENSG00000113240	CLK4	-	CDC like kinase 4	protein-coding
27.8667-8	chr3	104952014	104952219	+	0.266667	NA	Intergenic	Intergenic	-414597	NM_001243281	214	Hs.591293	NM_001627	ENSG00000170017	ALCAM	CD166|MEMD	activated leukocyte cell adhesion molecule	protein-coding
26.2334	chr8	101530042	101530231	+	0.266667	NA	intron (NM_001330593, intron 1 of 15)	intron (NM_001330593, intron 1 of 15)	37697	NM_001330593	79977	Hs.661088	NM_024915	ENSG00000083307	GRHL2	BOM|DFNA28|ECTDS|PPCD4|TFCP2L3	grainyhead like transcription factor 2	protein-coding
69.7001	chr2	60492008	60492434	+	0.266667	NA	intron (NM_138559, intron 2 of 4)	AluJb|SINE|Alu	61277	NM_001363864	53335	Hs.370549	NM_018014	ENSG00000119866	BCL11A	BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856	BAF chromatin remodeling complex subunit BCL11A	protein-coding
69.2334	chr1	12186262	12186625	+	0.266667	NA	intron (NM_001066, intron 1 of 9)	intron (NM_001066, intron 1 of 9)	-5270	NR_039775	100616438		NR_039775	ENSG00000263676	MIR4632	-	microRNA 4632	ncRNA
51.8334-3	chr13	73255207	73255616	+	0.266667	NA	Intergenic	Intergenic	196406	NM_001730	688	Hs.508234	NM_001730	ENSG00000102554	KLF5	BTEB2|CKLF|IKLF	Kruppel like factor 5	protein-coding
30.8667-9	chr8	95324131	95324297	+	0.266667	NA	intron (NR_038208, intron 2 of 3)	L1MC4|LINE|L1	-55013	NM_001363260	157657	Hs.548157	NM_177965	ENSG00000156172	C8orf37	BBS21|CORD16|RP64|smalltalk	chromosome 8 open reading frame 37	protein-coding
55.4999	chr16	3401393	3401844	+	0.266667	NA	promoter-TSS (NM_001324341)	promoter-TSS (NM_001324341)	403	NM_001347870	7727	Hs.155204	NM_003450	ENSG00000103343	ZNF174	ZSCAN8	zinc finger protein 174	protein-coding
33.7334-3	chr2	227434202	227434363	+	0.266667	NA	Intergenic	Intergenic	-37850	NR_049888	100847081		NR_049888	ENSG00000284092	MIR5703	mir-5703	microRNA 5703	ncRNA
49.5667-3	chr21	23485205	23485552	+	0.266667	NA	Intergenic	Intergenic	-100543	NR_040254	266917	Hs.145622	NR_040254	ENSG00000228592	D21S2088E	-	D21S2088E	ncRNA
37.9334-2	chr13	94428688	94428874	+	0.266667	NA	Intergenic	Intergenic	50901	NM_001922	1638	Hs.301865	NM_001922	ENSG00000080166	DCT	TRP-2|TYRP2	dopachrome tautomerase	protein-coding
45.2333	chr18	12567318	12567556	+	0.266667	NA	intron (NM_020148, intron 2 of 15)	L1MCa|LINE|L1	89295	NM_001128627	56907	Hs.515283	NM_020148	ENSG00000134278	SPIRE1	Spir-1	spire type actin nucleation factor 1	protein-coding
65.6667-2	chr3	170491145	170491402	+	0.266667	NA	intron (NM_020949, intron 4 of 7)	intron (NM_020949, intron 4 of 7)	23988	NR_135557	101928583	Hs.407600	NR_135555	ENSG00000285051	SLC7A14-AS1	-	SLC7A14 antisense RNA 1	ncRNA
30.7-4	chr16	8788610	8788738	+	0.266667	NA	Intergenic	Intergenic	8965	NM_015421	25880	Hs.513330	NM_015421	ENSG00000184857	TMEM186	C16orf51	transmembrane protein 186	protein-coding
53.6334	chr5	58117438	58117758	+	0.266667	NA	intron (NR_104669, intron 2 of 4)	intron (NR_104669, intron 2 of 4)	4743	NR_104669	101928569	Hs.319708	NR_104669		LINC02101	-	long intergenic non-protein coding RNA 2101	ncRNA
32.1667-10	chr7	4078462	4078695	+	0.266667	NA	intron (NM_152744, intron 21 of 44)	intron (NM_152744, intron 21 of 44)	-51107	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
64.4001-2	chr4	96693856	96694293	+	0.266667	NA	intron (NR_147149, intron 3 of 3)	L2a|LINE|L2	383371	NR_147149	105377338		NR_147149		LINC02267	-	long intergenic non-protein coding RNA 2267	ncRNA
38.6	chr13	47288983	47289239	+	0.266667	NA	Intergenic	Intergenic	-392035	NM_000621	3356	Hs.72630	NM_000621	ENSG00000102468	HTR2A	5-HT2A|HTR2	5-hydroxytryptamine receptor 2A	protein-coding
31.9333-6	chr20	55010422	55010625	+	0.266667	NA	Intergenic	Intergenic	-412520	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA
42-3	chr2	128109409	128109624	+	0.266667	NA	intron (NR_027671, intron 4 of 40)	AluJb|SINE|Alu	18316	NM_020120	56886	Hs.743306	NM_020120	ENSG00000136731	UGGT1	HUGT1|UGCGL1|UGT1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
54.4-4	chr3	43828465	43828757	+	0.266667	NA	Intergenic	L1ME3C|LINE|L1	-137017	NM_001346469	55129	Hs.656657	NM_018075	ENSG00000160746	ANO10	SCAR10|TMEM16K	anoctamin 10	protein-coding
60.7001	chr2	2914949	2915311	+	0.266667	NA	intron (NR_110228, intron 5 of 6)	L1MA9|LINE|L1	210896	NR_110228	101927554	Hs.638446	NR_110228	ENSG00000234423	LINC01250	-	long intergenic non-protein coding RNA 1250	ncRNA
46.4333	chr9	121365411	121366007	+	0.266667	NA	intron (NM_198194, intron 1 of 2)	MIR|SINE|MIR	4541	NM_004099	2040	Hs.253903	NM_004099	ENSG00000148175	STOM	BND7|EPB7|EPB72	stomatin	protein-coding
67.8667	chr3	61825055	61825469	+	0.266667	NA	intron (NM_002841, intron 2 of 29)	intron (NM_002841, intron 2 of 29)	263691	NM_002841	5793	Hs.595541	NM_002841	ENSG00000144724	PTPRG	HPTPG|PTPG|R-PTP-GAMMA|RPTPG	protein tyrosine phosphatase receptor type G	protein-coding
43.6	chr1	60956842	60957246	+	0.266667	NA	intron (NR_110618, intron 2 of 3)	intron (NR_110618, intron 2 of 3)	13732	NR_110618	100996570	Hs.46616	NR_110617	ENSG00000237928	NFIA-AS2	-	NFIA antisense RNA 2	ncRNA
45.4667-2	chr12	114850496	114850823	+	0.266667	NA	Intergenic	MIRb|SINE|MIR	-166484	NM_016569	6926	Hs.744016	NM_005996	ENSG00000135111	TBX3	TBX3-ISO|UMS|XHL	T-box transcription factor 3	protein-coding
51.8667	chr16	2760404	2760679	+	0.266667	NA	intron (NM_016333, intron 10 of 14)	intron (NM_016333, intron 10 of 14)	7903	NM_016333	23524	Hs.433343	NM_016333	ENSG00000167978	SRRM2	300-KD|CWF21|Cwc21|HSPC075|SRL300|SRm300	serine/arginine repetitive matrix 2	protein-coding
58.2333-3	chr2	32540525	32540799	+	0.266667	NA	intron (NM_016252, intron 61 of 73)	intron (NM_016252, intron 61 of 73)	8509	NR_030285	693143		NR_030285	ENSG00000207653	MIR558	MIRN558|hsa-mir-558	microRNA 558	ncRNA
59.6334	chr2	77378224	77378652	+	0.266667	NA	intron (NR_146416, intron 1 of 1)	intron (NR_146416, intron 1 of 1)	143938	NM_024993	80059	Hs.285782	NM_024993	ENSG00000176204	LRRTM4	-	leucine rich repeat transmembrane neuronal 4	protein-coding
53.9667-3	chr8	83788817	83789238	+	0.266667	NA	Intergenic	Intergenic	385269	NR_122034	103352670	Hs.399852	NR_122034	ENSG00000253898	LINC01419	LVCAT7|TCONS_00014497	long intergenic non-protein coding RNA 1419	ncRNA
36.8-5	chr2	21741892	21742267	+	0.266667	NA	Intergenic	AluSz6|SINE|Alu	-31427	NR_038837	645949	Hs.456782	NR_038837	ENSG00000229621	LINC01822	-	long intergenic non-protein coding RNA 1822	ncRNA
52.3333	chr12	13654757	13655533	+	0.266667	NA	intron (NM_000834, intron 4 of 12)	intron (NM_000834, intron 4 of 12)	-278400	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA
26.2667-9	chrX	69350518	69350661	+	0.266667	NA	Intergenic	Intergenic	-154646	NM_015686	27112	Hs.87619	NM_015686	ENSG00000130054	FAM155B	CXorf63|TED|TMEM28|bB57D9.1	family with sequence similarity 155 member B	protein-coding
51.3334	chr1	189700613	189700869	+	0.266667	NA	Intergenic	AluSp|SINE|Alu	775269	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
27.4334-5	chr5	173568420	173568530	+	0.266667	NA	Intergenic	L1ME3Cz|LINE|L1	-11159	NR_027109	285593	Hs.409730	NR_027108	ENSG00000253955	LOC285593	-	uncharacterized LOC285593	ncRNA
39.0666-2	chr3	136596955	136597179	+	0.266667	NA	intron (NM_005862, intron 4 of 33)	AluSz6|SINE|Alu	155311	NM_005862	10274	Hs.412586	NM_005862	ENSG00000118007	STAG1	MRD47|SA1|SCC3A	stromal antigen 1	protein-coding
41.6666-2	chr22	25998529	25998857	+	0.266667	NA	intron (NM_001318245, intron 40 of 43)	intron (NM_001318245, intron 40 of 43)	-170769	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding
51.4667-2	chr8	117162415	117162777	+	0.266667	NA	intron (NM_173851, intron 5 of 7)	intron (NM_173851, intron 5 of 7)	27601	NM_173851	169026	Hs.532270	NM_173851	ENSG00000164756	SLC30A8	ZNT8|ZnT-8	solute carrier family 30 member 8	protein-coding
50.1334-2	chr3	131718999	131719399	+	0.266667	NA	intron (NM_130808, intron 3 of 15)	intron (NM_130808, intron 3 of 15)	-216228	NM_007208	11222	Hs.205163	NM_007208	ENSG00000114686	MRPL3	COXPD9|MRL3|RPML3	mitochondrial ribosomal protein L3	protein-coding
50.2667-2	chr3	137674498	137674747	+	0.266667	NA	Intergenic	L1MA3|LINE|L1	-89693	NM_004189	8403	Hs.248184	NM_004189	ENSG00000168875	SOX14	SOX28	SRY-box transcription factor 14	protein-coding
25.0667-12	chr8	87376660	87376782	+	0.266667	NA	intron (NM_173538, intron 10 of 10)	MIRb|SINE|MIR	497294	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
40.1333-3	chr14	36019145	36019392	+	0.266667	NA	Intergenic	Intergenic	-51159	NR_073454	101101773	Hs.640678	NR_073454	ENSG00000257585	LINC00609	-	long intergenic non-protein coding RNA 609	ncRNA
58.2666	chr1	54749069	54749407	+	0.266667	NA	Intergenic	L2b|LINE|L2	15285	NM_152268	25973	Hs.380169	NM_152268	ENSG00000162396	PARS2	EIEE75|MT-PRORS|proRS	prolyl-tRNA synthetase 2, mitochondrial	protein-coding
27.8667-3	chr14	88515739	88515986	+	0.266667	NA	intron (NM_007039, intron 3 of 18)	L2c|LINE|L2	39145	NM_007039	11099	Hs.437040	NM_007039	ENSG00000070778	PTPN21	PTPD1|PTPRL10	protein tyrosine phosphatase non-receptor type 21	protein-coding
35.7667-6	chr6	123720215	123720664	+	0.266667	NA	Intergenic	L1M5|LINE|L1	-83346	NM_001256021	10345	Hs.144744	NM_006073	ENSG00000186439	TRDN	CPVT5|TDN|TRISK	triadin	protein-coding
75.0668	chr1	114292552	114293029	+	0.266667	NA	Intergenic	Intergenic	-138921	NM_001253772	148281	Hs.370963	NM_205848	ENSG00000134207	SYT6	sytVI	synaptotagmin 6	protein-coding
44.6001	chr6	114069011	114069269	+	0.266667	NA	intron (NR_125845, intron 4 of 9)	intron (NR_125845, intron 4 of 9)	-6263	NM_153612	222537	Hs.645477	NM_153612	ENSG00000249853	HS3ST5	3-OST-5|3OST5|HS3OST5|NBLA04021	heparan sulfate-glucosamine 3-sulfotransferase 5	protein-coding
59.1666-2	chr8	63607914	63608265	+	0.266667	NA	Intergenic	Intergenic	142240	NR_125825	102724612	Hs.97639	NR_125825	ENSG00000253894	LOC102724612	-	uncharacterized LOC102724612	ncRNA
47.5001-3	chr8	127159240	127159488	+	0.266667	NA	Intergenic	Intergenic	38263	NR_120364	103021165	Hs.573407	NR_120364		CASC19	CARLO6|CARLo-6|LINC01245	cancer susceptibility 19	ncRNA
45.8-2	chr10	57468504	57468813	+	0.266667	NA	Intergenic	Intergenic	-164099	NR_037490	100500834		NR_037490	ENSG00000264747	MIR3924	-	microRNA 3924	ncRNA
81.3332	chr9	105595063	105595588	+	0.266667	NA	intron (NM_001351502, intron 5 of 13)	L1MB7|LINE|L1	37194	NM_001198963	2218	Hs.55777	NM_006731	ENSG00000106692	FKTN	CMD1X|FCMD|LGMD2M|LGMDR13|MDDGA4|MDDGB4|MDDGC4	fukutin	protein-coding
55.4001	chr3	59708567	59708866	+	0.266667	NA	Intergenic	L1ME3|LINE|L1	-50219	NR_149028	339902	Hs.132446	NR_149028		LOC339902	-	hCG1813818	ncRNA
62.5334	chr1	112039760	112040031	+	0.266667	NA	Intergenic	Intergenic	49359	NR_145438	643355	Hs.279714	NR_145438	ENSG00000231437	LINC01750	-	long intergenic non-protein coding RNA 1750	ncRNA
61.4334	chr11	101564212	101564582	+	0.266667	NA	intron (NM_004621, intron 1 of 12)	L1M5|LINE|L1	19610	NM_004621	7225	Hs.159003	NM_004621	ENSG00000137672	TRPC6	FSGS2|TRP6	transient receptor potential cation channel subfamily C member 6	protein-coding
50.2001	chr2	43985098	43985481	+	0.266667	NA	intron (NM_133259, intron 1 of 37)	L1MC2|LINE|L1	10700	NM_133259	10128	Hs.368084	NM_133259	ENSG00000138095	LRPPRC	CLONE-23970|GP130|LRP130|LSFC	leucine rich pentatricopeptide repeat containing	protein-coding
55.3334	chr7	44500548	44500885	+	0.266667	NA	Intergenic	Intergenic	-10058	NM_015332	23386	Hs.488171	NM_015332	ENSG00000015676	NUDCD3	NudCL	NudC domain containing 3	protein-coding
28.5333-3	chr14	66222838	66223082	+	0.266667	NA	Intergenic	Intergenic	-263411	NR_024338	440184	Hs.412138	NM_001004331	ENSG00000196553	CCDC196	C14orf53|LINC00238|NCRNA00238	coiled-coil domain containing 196	protein-coding
31.2-2	chr1	74637835	74638062	+	0.266667	NA	intron (NM_001002912, intron 5 of 14)	intron (NM_001002912, intron 5 of 14)	35844	NM_001002912	127254	Hs.531182	NM_001002912	ENSG00000178965	ERICH3	C1orf173	glutamate rich 3	protein-coding
57.4334	chr1	9308406	9308994	+	0.266667	NA	intron (NM_025106, intron 1 of 2)	MIRb|SINE|MIR	15806	NM_025106	80176	Hs.8261	NM_025106	ENSG00000171621	SPSB1	SSB-1|SSB1	splA/ryanodine receptor domain and SOCS box containing 1	protein-coding
31.8334-3	chr9	77014268	77014425	+	0.266667	NA	Intergenic	CpG	-5309	NM_001013735	442425	Hs.553843	NM_001013735	ENSG00000204612	FOXB2	bA159H20.4	forkhead box B2	protein-coding
49.4334	chr3	17800332	17800721	+	0.266667	NA	Intergenic	MLT2F|LTR|ERVL	57582	NR_135536	105376975	Hs.543238	NR_135536		LOC105376975	-	uncharacterized LOC105376975	ncRNA
65.6667	chr13	24698641	24699096	+	0.266667	NA	intron (NM_001676, intron 12 of 22)	intron (NM_001676, intron 12 of 22)	18457	NM_001185085	479	Hs.147111	NM_001676	ENSG00000075673	ATP12A	ATP1AL1|HK	ATPase H+/K+ transporting non-gastric alpha2 subunit	protein-coding
30.2667-4	chr3	128178353	128178530	+	0.266667	NA	intron (NM_021937, intron 1 of 6)	intron (NM_021937, intron 1 of 6)	-24527	NM_001319086	8607	Hs.272822	NM_003707	ENSG00000175792	RUVBL1	ECP-54|ECP54|INO80H|NMP 238|NMP238|PONTIN|Pontin52|RVB1|TIH1|TIP49|TIP49A	RuvB like AAA ATPase 1	protein-coding
25.0333-9	chr22	20053661	20053821	+	0.266667	NA	intron (NM_001322149, intron 5 of 6)	intron (NM_001322149, intron 5 of 6)	20602	NR_029706	406961		NR_029706	ENSG00000208023	MIR185	MIRN185|miR-185	microRNA 185	ncRNA
70	chr3	94451793	94452133	+	0.266667	NA	Intergenic	Intergenic	388902	NM_022072	63899	Hs.436594	NM_022072	ENSG00000178694	NSUN3	MST077|MSTP077	NOP2/Sun RNA methyltransferase 3	protein-coding
54.5334-2	chr11	85145463	85145922	+	0.266667	NA	intron (NM_001142699, intron 5 of 27)	L1MA3|LINE|L1	-222271	NM_001300983	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
56.6334-2	chr17	35191749	35192106	+	0.266667	NA	TTS (NM_152462)	TTS (NM_152462)	2466	NM_152462	146861	Hs.514814	NM_152462	ENSG00000164729	SLC35G3	AMAC1|TMEM21A	solute carrier family 35 member G3	protein-coding
54.9334-2	chr5	89758096	89758342	+	0.266667	NA	Intergenic	Intergenic	258501	NR_037433	100500825		NR_037433	ENSG00000264342	MIR3660	mir-3660	microRNA 3660	ncRNA
50.4334-2	chr17	34338712	34339033	+	0.266667	NA	Intergenic	L1PA14|LINE|L1	-17608	NM_005408	6357	Hs.414629	NM_005408	ENSG00000181374	CCL13	CKb10|MCP-4|NCC-1|NCC1|SCYA13|SCYL1	C-C motif chemokine ligand 13	protein-coding
43.8667-4	chr21	43264922	43265195	+	0.266667	NA	Intergenic	AluSx1|SINE|Alu	66981	NR_103713	100126693	Hs.473952	NR_103713		LINC00322	C21orf136|NCRNA00322	long intergenic non-protein coding RNA 322	ncRNA
42.6-6	chr7	12140142	12140438	+	0.266667	NA	Intergenic	Intergenic	-71004	NM_018374	54664	Hs.396358	NM_018374	ENSG00000106460	TMEM106B	HLD16	transmembrane protein 106B	protein-coding
28.2334	chr4	61935355	61935599	+	0.266667	NA	intron (NM_001371343, intron 13 of 23)	intron (NM_001371343, intron 13 of 23)	226288	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
57.8001	chr8	128471939	128472330	+	0.266667	NA	intron (NR_121672, intron 2 of 7)	intron (NR_121672, intron 2 of 7)	92545	NR_121673	101927774	Hs.628730	NR_121672		LINC00824	LINC01263	long intergenic non-protein coding RNA 824	ncRNA
53.0666	chr14	25635953	25636289	+	0.266667	NA	Intergenic	Intergenic	-585824	NM_001351940	29091	Hs.508958	NM_014178	ENSG00000168952	STXBP6	HSPC156|amisyn	syntaxin binding protein 6	protein-coding
40.2666-3	chr8	81349379	81349637	+	0.266667	NA	Intergenic	Intergenic	68972	NM_001444	2171	Hs.408061	NM_001444	ENSG00000164687	FABP5	E-FABP|EFABP|KFABP|PA-FABP|PAFABP	fatty acid binding protein 5	protein-coding
44.8667-2	chr6	50414103	50414504	+	0.266667	NA	Intergenic	MIR|SINE|MIR	-299241	NM_172238	83741	Hs.434107	NM_172238	ENSG00000008197	TFAP2D	TFAP2BL1	transcription factor AP-2 delta	protein-coding
71.8001	chr16	66584417	66584713	+	0.266667	NA	intron (NM_144673, intron 2 of 3)	MLT1B|LTR|ERVL-MaLR	5102	NM_001199317	146225	Hs.195685	NM_144673	ENSG00000140932	CMTM2	CKLFSF2	CKLF like MARVEL transmembrane domain containing 2	protein-coding
37.3-6	chr8	127488291	127488515	+	0.266667	NA	Intergenic	L1MDa|LINE|L1	-6264	NR_024393	727677	Hs.673248	NR_024393	ENSG00000246228	CASC8	CARLO1|CARLo-1|LINC00860	cancer susceptibility 8	ncRNA
39.1334-2	chr8	54348611	54348890	+	0.266667	NA	Intergenic	L1MB3|LINE|L1	18064	NR_004385	26766		NR_004385	ENSG00000199212	RNU105C	E1-5|E1-6	RNA, U105C small nucleolar	snoRNA
44.8-4	chr6	112318488	112318740	+	0.266667	NA	Intergenic	Intergenic	-28716	NM_001013734	442247	Hs.448264	NM_001013734	ENSG00000251258	RFPL4B	RNF211	ret finger protein like 4B	protein-coding
109.6	chr8	107016735	107017282	+	0.266667	NA	Intergenic	L1MA8|LINE|L1	-246764	NM_139166	137735	Hs.374668	NM_139166	ENSG00000174429	ABRA	STARS	actin binding Rho activating protein	protein-coding
41.9334-3	chr2	137441081	137441302	+	0.266667	NA	intron (NM_001316349, intron 14 of 27)	intron (NM_001316349, intron 14 of 27)	486741	NR_120402	101928273	Hs.560928	NR_120402		LOC101928273	-	uncharacterized LOC101928273	ncRNA
63.9001	chr7	42311996	42312384	+	0.266667	NA	Intergenic	Intergenic	-74981	NM_000168	2737	Hs.21509	NM_000168	ENSG00000106571	GLI3	ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV	GLI family zinc finger 3	protein-coding
39.5-4	chr2	236967402	236967607	+	0.266667	NA	Intergenic	Intergenic	88663	NR_135202	93463	Hs.652810	NR_135202	ENSG00000124835	LOC93463	-	uncharacterized LOC93463	ncRNA
27.1334	chr6	147098335	147098458	+	0.266667	NA	intron (NR_034115, intron 4 of 10)	intron (NR_034115, intron 4 of 10)	-60529	NR_132442	106182249	Hs.575390	NR_132442	ENSG00000196634	LUADT1	-	lung adenocarcinoma associated transcript 1	ncRNA
30.5333-5	chr2	65395234	65395374	+	0.266667	NA	intron (NM_181784, intron 1 of 5)	intron (NM_181784, intron 1 of 5)	-28526	NM_001128210	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding
45.6999	chr5	44555108	44555583	+	0.266667	NA	Intergenic	Intergenic	-45063	NR_131946	102723839	Hs.561412	NR_131946		LINC02224	BRCAT107	long intergenic non-protein coding RNA 2224	ncRNA
75.2333	chr4	16319900	16320364	+	0.266667	NA	Intergenic	L1ME4b|LINE|L1	93469	NR_027697	202020	Hs.445315	NM_152684	ENSG00000263327	TAPT1-AS1	-	TAPT1 antisense RNA 1 (head to head)	ncRNA
66.8334-2	chr17	75762344	75762651	+	0.266667	NA	intron (NM_000154, intron 5 of 7)	intron (NM_000154, intron 5 of 7)	2695	NM_000154	2584	Hs.407966	NM_000154	ENSG00000108479	GALK1	GALK|GK1|HEL-S-19	galactokinase 1	protein-coding
73.5666	chr7	52583614	52583912	+	0.266667	NA	Intergenic	L1MCa|LINE|L1	-451870	NM_182595	285877	Hs.381970	NM_182595	ENSG00000221900	POM121L12	-	POM121 transmembrane nucleoporin like 12	protein-coding
39.4-7	chr21	45795160	45795471	+	0.266667	NA	intron (NM_001348243, intron 3 of 15)	(CTTTT)n|Simple_repeat|Simple_repeat	41104	NR_038876	100129027	Hs.689591	NR_038876	ENSG00000205424	LOC100129027	-	uncharacterized LOC100129027	ncRNA
33.2-11	chr7	45707627	45707763	+	0.266667	NA	intron (NM_021116, intron 17 of 19)	L1MC2|LINE|L1	61323	NR_024271	641977	Hs.723477	NR_024271	ENSG00000214765	SEPTIN7P2	SEPT13|SEPT7B|SEPT7P2	septin 7 pseudogene 2	pseudo
74.9	chr4	134570124	134570674	+	0.266667	NA	Intergenic	Intergenic	146531	NR_147155	105377434	Hs.738318	NR_147155		LINC02462	-	long intergenic non-protein coding RNA 2462	ncRNA
65.2-2	chr7	50749742	50750167	+	0.266667	NA	intron (NM_001371008, intron 1 of 15)	intron (NM_001371008, intron 1 of 15)	-17601	NM_001001549	2887	Hs.164060	NM_005311	ENSG00000106070	GRB10	GRB-IR|Grb-10|IRBP|MEG1|RSS	growth factor receptor bound protein 10	protein-coding
58.6666-2	chr7	40718483	40718833	+	0.266667	NA	intron (NM_024728, intron 13 of 14)	intron (NM_024728, intron 13 of 14)	261281	NR_110831	101928744	Hs.639767	NR_110831	ENSG00000232458	LINC01450	-	long intergenic non-protein coding RNA 1450	ncRNA
55.4667-2	chr2	118341073	118341433	+	0.266667	NA	Intergenic	L1MC5a|LINE|L1	-154867	NR_144530	100506797	Hs.116176	NR_144530	ENSG00000226856	THORLNC	THOR	testis associated oncogenic lncRNA	ncRNA
62.3999-2	chr8	136444505	136445022	+	0.266667	NA	Intergenic	Charlie7|DNA|hAT-Charlie	-86035	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
68.6667	chr2	82442928	82443327	+	0.266667	NA	Intergenic	Intergenic	-413676	NR_033423	1720	Hs.169235	NR_033423		DHFRP3	-	dihydrofolate reductase pseudogene 3	pseudo
52.8	chr16	27532855	27533121	+	0.266667	NA	intron (NM_001520, intron 5 of 36)	AluSx1|SINE|Alu	16925	NM_001520	2975	Hs.371718	NM_001520	ENSG00000077235	GTF3C1	TFIIIC|TFIIIC220|TFIIICalpha	general transcription factor IIIC subunit 1	protein-coding
41.8666-6	chr2	29919099	29919548	+	0.266667	NA	intron (NM_004304, intron 1 of 28)	intron (NM_004304, intron 1 of 28)	2263	NM_004304	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	ALK receptor tyrosine kinase	protein-coding
50.7999	chr10	125571400	125571777	+	0.266667	NA	Intergenic	Zaphod|DNA|hAT-Tip100	-2783	NR_023362	100169752	Hs.652647	NR_023362	ENSG00000237675	TEX36-AS1	-	TEX36 antisense RNA 1	ncRNA
62.2001	chr10	72788258	72788650	+	0.266667	NA	intron (NR_073062, intron 3 of 9)	AluJr|SINE|Alu	67425	NR_039823	100616286		NR_039823	ENSG00000266719	MIR4676	-	microRNA 4676	ncRNA
59.4666-4	chr7	54978167	54978555	+	0.266667	NA	Intergenic	Intergenic	-40656	NM_001346941	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding
35-13	chr8	15024504	15024684	+	0.266667	NA	intron (NM_139167, intron 1 of 7)	L2a|LINE|L2	-171084	NR_029875	494332		NR_029875	ENSG00000199127	MIR383	MIRN383|hsa-mir-383|mir-383	microRNA 383	ncRNA
23.0667-12	chr2	183465717	183465820	+	0.266667	NA	Intergenic	Intergenic	341325	NM_138285	129401	Hs.180591	NM_138285	ENSG00000163002	NUP35	MP-44|MP44|NP44|NUP53	nucleoporin 35	protein-coding
48.0667-3	chr5	132445014	132445453	+	0.266667	NA	intron (NR_161242, intron 2 of 3)	MIRc|SINE|MIR	34304	NR_161242	441108	Hs.658288	NM_001013717		C5orf56	-	chromosome 5 open reading frame 56	ncRNA
45.7-3	chr7	20118586	20118871	+	0.266667	NA	intron (NR_110114, intron 1 of 5)	intron (NR_110114, intron 1 of 5)	21698	NR_110114	101927668	Hs.715900	NR_110114		LOC101927668	-	uncharacterized LOC101927668	ncRNA
65.3	chr10	85440391	85440981	+	0.266667	NA	intron (NR_120670, intron 1 of 2)	intron (NR_120670, intron 1 of 2)	7823	NR_120670	101929662	Hs.639355	NR_120670	ENSG00000224504	LOC101929662	-	uncharacterized LOC101929662	ncRNA
53.2668	chr6	159337475	159337760	+	0.266667	NA	Intergenic	L1MA4A|LINE|L1	-45914	NR_125873	102724053	Hs.98463	NR_125873	ENSG00000234777	LINC02529	-	long intergenic non-protein coding RNA 2529	ncRNA
80.2667	chr2	81262407	81262914	+	0.266667	NA	Intergenic	Intergenic	204286	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
64.5334	chr3	171203603	171204027	+	0.266667	NA	intron (NM_001161563, intron 4 of 31)	intron (NM_001161563, intron 4 of 31)	-97056	NR_030295	693154		NR_030295	ENSG00000207963	MIR569	MIRN569|hsa-mir-569	microRNA 569	ncRNA
41.9667-2	chr7	4741464	4741731	+	0.266667	NA	intron (NM_001037165, intron 2 of 8)	AluSx1|SINE|Alu	-34026	NM_001364858	9907	Hs.558440	NM_014855	ENSG00000242802	AP5Z1	KIAA0415|SPG48|zeta	adaptor related protein complex 5 subunit zeta 1	protein-coding
25.6-3	chr11	97809843	97809958	+	0.266667	NA	Intergenic	MLT1A|LTR|ERVL-MaLR	-1211049	NM_014361	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
40.6666-8	chr8	80167215	80167499	+	0.266667	NA	intron (NR_105035, intron 1 of 6)	intron (NR_105035, intron 1 of 6)	3764	NR_105037	7163	Hs.368433	NM_005079	ENSG00000076554	TPD52	D52|N8L|PC-1|PrLZ|hD52	tumor protein D52	protein-coding
43.8334	chr14	45552891	45553105	+	0.266667	NA	Intergenic	L1MA3|LINE|L1	162604	NR_146546	105370479		NR_146546	ENSG00000258616	LINC02303	-	long intergenic non-protein coding RNA 2303	ncRNA
48.1334-3	chr6	37775334	37775616	+	0.266667	NA	Intergenic	FLAM_C|SINE|Alu	-44252	NM_021943	60685	Hs.36959	NM_021943	ENSG00000156639	ZFAND3	TEX27	zinc finger AN1-type containing 3	protein-coding
35.4-2	chr10	30968140	30968314	+	0.266667	NA	intron (NR_026560, intron 1 of 6)	intron (NR_026560, intron 1 of 6)	31290	NM_001143769	220929	Hs.660642	NM_182755	ENSG00000183621	ZNF438	bA330O11.1	zinc finger protein 438	protein-coding
74.1334	chr2	236266152	236266594	+	0.266667	NA	Intergenic	MamRep1527|LTR|LTR	-2028	NM_212556	401036	Hs.639909	NM_212556	ENSG00000182177	ASB18	ASB-18	ankyrin repeat and SOCS box containing 18	protein-coding
63.0667-2	chr5	31036634	31036930	+	0.266667	NA	Intergenic	Intergenic	-156904	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
31.5334	chr11	37933531	37933687	+	0.266667	NA	Intergenic	Intergenic	-4992	NR_135110	105376633	Hs.135690	NR_135110	ENSG00000254516	LINC02760	-	long intergenic non-protein coding RNA 2760	ncRNA
39-4	chr16	12005706	12005950	+	0.266667	NA	intron (NM_032167, intron 3 of 20)	Tigger4a|DNA|TcMar-Tigger	29094	NM_032167	92017	Hs.458401	NM_032167	ENSG00000048471	SNX29	A-388D4.1|RUNDC2A	sorting nexin 29	protein-coding
64.7001	chr3	169875240	169875503	+	0.266667	NA	Intergenic	Intergenic	-5436	NM_001277127	79782	Hs.411295	NM_024727	ENSG00000114248	LRRC31	HEL-S-293	leucine rich repeat containing 31	protein-coding
45-2	chr10	70413095	70413344	+	0.266667	NA	intron (NM_004096, intron 1 of 2)	HAL1ME|LINE|L1	9074	NM_004096	1979	Hs.621200	NM_004096	ENSG00000148730	EIF4EBP2	4EBP2|PHASII	eukaryotic translation initiation factor 4E binding protein 2	protein-coding
80.2001	chr2	62696967	62697496	+	0.266667	NA	intron (NM_001142615, intron 1 of 22)	Charlie25|DNA|hAT-Charlie	-8393	NM_001354212	23301	Hs.271667	NM_015252	ENSG00000115504	EHBP1	HPC12|NACSIN	EH domain binding protein 1	protein-coding
41.4667	chr12	47119944	47120182	+	0.266667	NA	intron (NM_001281429, intron 2 of 2)	L1MB8|LINE|L1	-40104	NM_001370299	347902	Hs.121520	NM_181847	ENSG00000139211	AMIGO2	ALI1|AMIGO-2|DEGA	adhesion molecule with Ig like domain 2	protein-coding
70.6	chr16	3562635	3563365	+	0.266667	NA	intron (NR_075083, intron 5 of 20)	intron (NR_075083, intron 5 of 20)	14403	NR_075083	197358	Hs.592091	NM_178844	ENSG00000167984	NLRC3	CLR16.2|NOD3	NLR family CARD domain containing 3	protein-coding
68.4	chr9	70430840	70431229	+	0.266667	NA	Intergenic	Intergenic	-16377	NM_001206	687	Hs.150557	NM_001206	ENSG00000119138	KLF9	BTEB|BTEB1	Kruppel like factor 9	protein-coding
47.3334	chr7	34093885	34094203	+	0.266667	NA	intron (NM_133468, intron 14 of 15)	intron (NM_133468, intron 14 of 15)	188505	NM_001365308	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
39.3334	chr1	54118153	54118323	+	0.266667	NA	Intergenic	Intergenic	34943	NM_001353655	200008		NM_201546	ENSG00000157211	CDCP2	-	CUB domain containing protein 2	protein-coding
32.3667-2	chr2	60974637	60974785	+	0.266667	NA	intron (NM_144709, intron 4 of 17)	MER52D|LTR|ERV1	42501	NM_001322124	150962	Hs.368348	NM_144709	ENSG00000162927	PUS10	CCDC139|DOBI	pseudouridine synthase 10	protein-coding
55.6001	chr10	67099191	67099625	+	0.266667	NA	non-coding (NR_111909, exon 3 of 3)	non-coding (NR_111909, exon 3 of 3)	87142	NR_111909	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding
48.2334	chr20	16653293	16653689	+	0.266667	NA	Intergenic	Intergenic	-76535	NM_003092	6629	Hs.280378	NM_003092	ENSG00000125870	SNRPB2	Msl1|U2B''	small nuclear ribonucleoprotein polypeptide B2	protein-coding
55.7001	chr2	66822782	66823048	+	0.266667	NA	Intergenic	L2|LINE|L2	-81521	NR_110169	101060019	Hs.116425	NR_110169	ENSG00000230525	LINC01799	-	long intergenic non-protein coding RNA 1799	ncRNA
44.7001	chr2	126415271	126415458	+	0.266667	NA	Intergenic	L1MA6|LINE|L1	-240571	NM_001256584	2995	Hs.59138	NM_002101	ENSG00000136732	GYPC	CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2'	glycophorin C (Gerbich blood group)	protein-coding
75.4665	chr20	48204545	48205065	+	0.266667	NA	Intergenic	L2a|LINE|L2	-155106	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA
52.2667-2	chr2	40172804	40173089	+	0.266667	NA	intron (NM_001112800, intron 4 of 8)	AluSc8|SINE|Alu	255312	NR_038441	100128590	Hs.744988	NR_038441	ENSG00000227028	SLC8A1-AS1	-	SLC8A1 antisense RNA 1	ncRNA
75.8665	chr7	115713884	115714406	+	0.266667	NA	Intergenic	Intergenic	-132704	NR_145801	109623459		NR_145801	ENSG00000202377	SNORA25B	-	small nucleolar RNA, H/ACA box 25B	snoRNA
30.2666-2	chr15	56462223	56462434	+	0.266667	NA	intron (NM_018365, intron 2 of 9)	L1MC5a|LINE|L1	2809	NM_018365	55329	Hs.444483	NM_018365	ENSG00000138587	MNS1	SPATA40	meiosis specific nuclear structural 1	protein-coding
37.4333-4	chr12	49311651	49312089	+	0.266667	NA	intron (NR_120449, intron 2 of 7)	AluSg|SINE|Alu	-11385	NM_001100620	10024	Hs.524399	NM_005480	ENSG00000135451	TROAP	TASTIN	trophinin associated protein	protein-coding
37.3667-4	chr3	120698475	120698741	+	0.266667	NA	intron (NM_173825, intron 4 of 7)	intron (NM_173825, intron 4 of 7)	-16369	NM_000187	3081	Hs.368254	NM_000187	ENSG00000113924	HGD	AKU|HGO	homogentisate 1,2-dioxygenase	protein-coding
49.2667	chr17	3915857	3916080	+	0.266667	NA	intron (NM_002558, intron 1 of 11)	intron (NM_002558, intron 1 of 11)	497	NM_002558	5023	Hs.41735	NM_002558	ENSG00000108405	P2RX1	P2X1	purinergic receptor P2X 1	protein-coding
61.6001	chr21	16465956	16466285	+	0.266667	NA	intron (NR_136550, intron 1 of 3)	intron (NR_136550, intron 1 of 3)	45825	NR_136550	388815	Hs.473394	NR_027790		MIR99AHG	C21orf34|C21orf35|LINC00478|MONC	mir-99a-let-7c cluster host gene	ncRNA
55.5667-2	chr14	43429988	43430607	+	0.266667	NA	Intergenic	Intergenic	1076986	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
32.8-7	chr2	210562266	210562484	+	0.266667	NA	intron (NR_161225, intron 2 of 38)	intron (NR_161225, intron 2 of 38)	5776	NM_001875	1373	Hs.149252	NM_001875	ENSG00000021826	CPS1	CPSASE1|PHN	carbamoyl-phosphate synthase 1	protein-coding
40.9334	chr13	85270800	85270977	+	0.266667	NA	Intergenic	L1PB1|LINE|L1	-92715	NR_046989	100874137	Hs.742643	NR_046989	ENSG00000226317	LINC00351	-	long intergenic non-protein coding RNA 351	ncRNA
76.6668	chr9	135718631	135719084	+	0.266667	NA	intron (NM_020822, intron 2 of 30)	intron (NM_020822, intron 2 of 30)	16672	NM_020822	57582	Hs.104950	NM_020822	ENSG00000107147	KCNT1	EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2	potassium sodium-activated channel subfamily T member 1	protein-coding
22.1333-4	chr11	103754523	103754632	+	0.266667	NA	Intergenic	Intergenic	-95329	NR_039842	100616457		NR_039842	ENSG00000264200	MIR4693	-	microRNA 4693	ncRNA
60.8333	chr8	132485931	132486724	+	0.266667	NA	Intergenic	Intergenic	-5232	NM_004519	3786	Hs.374023	NM_004519	ENSG00000184156	KCNQ3	BFNC2|EBN2|KV7.3	potassium voltage-gated channel subfamily Q member 3	protein-coding
40.2667-3	chr17	74442674	74442859	+	0.266667	NA	intron (NM_018653, intron 2 of 3)	intron (NM_018653, intron 2 of 3)	9069	NM_018653	55890	Hs.446438	NM_018653	ENSG00000170412	GPRC5C	RAIG-3|RAIG3	G protein-coupled receptor class C group 5 member C	protein-coding
49.2667-3	chr6	165137287	165137573	+	0.266667	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	172175	NM_144980	168090	Hs.144734	NM_144980	ENSG00000112539	C6orf118	bA85G2.1|dJ416F21.2	chromosome 6 open reading frame 118	protein-coding
44.5334-2	chr8	66880793	66881008	+	0.266667	NA	exon (NM_001136161, exon 8 of 13)	exon (NM_001136161, exon 8 of 13)	9398	NM_001136160	157777	Hs.437006	NM_173518	ENSG00000178460	MCMDC2	C8orf45	minichromosome maintenance domain containing 2	protein-coding
35.7334-2	chr6	14732774	14732999	+	0.266667	NA	Intergenic	Intergenic	-447432	NR_108096	102216342	Hs.563409	NR_108096	ENSG00000226673	LINC01108	LncRNA-ES1	long intergenic non-protein coding RNA 1108	ncRNA
59.4333	chr2	123245528	123245774	+	0.266667	NA	Intergenic	L1PA10|LINE|L1	-172170	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
63.8001	chr5	64339331	64339682	+	0.266667	NA	intron (NM_001113561, intron 7 of 7)	intron (NM_001113561, intron 7 of 7)	-166509	NM_001029875	401190	Hs.657133	NM_001029875	ENSG00000186479	RGS7BP	R7BP	regulator of G protein signaling 7 binding protein	protein-coding
43.9001-2	chr3	21141251	21141508	+	0.266667	NA	Intergenic	Intergenic	-264347	NR_002311	391518	Hs.543226	NR_002311		VENTXP7	HPX42|VENTX1	VENT homeobox pseudogene 7	pseudo
32.4667-5	chr7	38128083	38128255	+	0.266667	NA	Intergenic	Intergenic	-50076	NM_001363347	83930	Hs.309753	NM_032016	ENSG00000010270	STARD3NL	MENTHO	STARD3 N-terminal like	protein-coding
48.5333	chr10	27684609	27684866	+	0.266667	NA	intron (NM_001242702, intron 5 of 6)	intron (NM_001242702, intron 5 of 6)	-59878	NR_121652	101929202	Hs.568843	NR_121652		MKX-AS1	-	MKX antisense RNA 1	ncRNA
105.567	chr9	27147318	27148027	+	0.266667	NA	intron (NM_001290078, intron 1 of 20)	L1ME1|LINE|L1	38531	NM_000459	7010	Hs.89640	NM_000459	ENSG00000120156	TEK	CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1	TEK receptor tyrosine kinase	protein-coding
49.6333	chr1	208011455	208011759	+	0.266667	NA	Intergenic	L1ME4a|LINE|L1	-100482	NM_001773	947	Hs.374990	NM_001773	ENSG00000174059	CD34	-	CD34 molecule	protein-coding
33.1-7	chr8	50967022	50967267	+	0.266667	NA	Intergenic	Looper|DNA|PiggyBac	803013	NM_001321778	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
48.6-4	chr8	42021948	42022358	+	0.266667	NA	intron (NM_001305878, intron 2 of 13)	intron (NM_001305878, intron 2 of 13)	-29597	NR_136589	105379393	Hs.742878	NR_136589		LOC105379393	-	uncharacterized LOC105379393	ncRNA
50.1334	chr2	51417606	51417839	+	0.266667	NA	intron (NR_135237, intron 4 of 10)	L1MEg|LINE|L1	385121	NR_135237	730100	Hs.640140	NR_135237	ENSG00000231918	LOC730100	-	uncharacterized LOC730100	ncRNA
48.2001	chr18	58727787	58728010	+	0.266667	NA	intron (NM_006785, intron 10 of 16)	MIR|SINE|MIR	-56025	NM_001289967	101927322	Hs.644875	NM_001289967		LOC101927322	-	uncharacterized LOC101927322	protein-coding
58.3001	chr3	89443067	89443432	+	0.266667	NA	intron (NM_005233, intron 13 of 16)	intron (NM_005233, intron 13 of 16)	335628	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
62.3334	chr21	32000943	32001323	+	0.266667	NA	3' UTR (NM_014586, exon 11 of 11)	3' UTR (NM_014586, exon 11 of 11)	85162	NR_038033	100551499	Hs.224449	NR_038033		LINC00159	C21orf44|NCRNA00159	long intergenic non-protein coding RNA 159	ncRNA
52.2667	chr18	61198533	61198893	+	0.266667	NA	Intergenic	Intergenic	-134717	NM_031891	28316	Hs.671510	NM_031891	ENSG00000101542	CDH20	CDH7L3|Cdh7	cadherin 20	protein-coding
24.5-5	chr14	95762336	95762650	+	0.266667	NA	Intergenic	L1MC3|LINE|L1	47010	NR_148060	107984703	Hs.633538	NR_148060		LOC107984703	-	uncharacterized LOC107984703	ncRNA
53.6-3	chr6	137054962	137055236	+	0.266667	NA	Intergenic	L1MB7|LINE|L1	-9919	NM_001278723	53832	Hs.445868	NM_014432	ENSG00000016402	IL20RA	CRF2-8|IL-20R-alpha|IL-20R1|IL-20RA	interleukin 20 receptor subunit alpha	protein-coding
30.4667-7	chr4	100007177	100007390	+	0.266667	NA	intron (NR_125923, intron 1 of 3)	intron (NR_125923, intron 1 of 3)	56789	NR_125923	256880	Hs.448554	NR_002799	ENSG00000245322	LOC256880	-	uncharacterized LOC256880	ncRNA
36.4-2	chr11	82574692	82574879	+	0.266667	NA	Intergenic	MIRb|SINE|MIR	159079	NM_175885	220382	Hs.448218	NM_175885	ENSG00000182103	FAM181B	-	family with sequence similarity 181 member B	protein-coding
46.4-2	chr10	113703737	113703987	+	0.266667	NA	intron (NM_001227, intron 2 of 6)	Tigger1|DNA|TcMar-Tigger	-5483	NM_001267058	840	Hs.9216	NM_001227	ENSG00000165806	CASP7	CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3	caspase 7	protein-coding
39.6-5	chr5	37575474	37575669	+	0.266667	NA	intron (NM_001345998, intron 9 of 17)	MER21C|LTR|ERVL	196253	NM_001345999	55100	Hs.213690	NM_018034	ENSG00000082068	WDR70	-	WD repeat domain 70	protein-coding
45.8667-4	chr3	74966070	74966282	+	0.266667	NA	Intergenic	AluSz|SINE|Alu	-248300	NR_049831	100846999		NR_049831	ENSG00000266780	MIR4444-2	-	microRNA 4444-2	ncRNA
80.5331	chr2	183941338	183941932	+	0.266667	NA	Intergenic	L1MA4A|LINE|L1	-437340	NR_039638	100616305		NR_039638	ENSG00000266808	MIR548AE1	-	microRNA 548ae-1	ncRNA
51.9667-5	chr5	38106067	38106363	+	0.266667	NA	intron (NR_147009, intron 2 of 2)	intron (NR_147009, intron 2 of 2)	-42265	NR_134272	101929745	Hs.374715	NR_134272	ENSG00000248461	LINC02119	-	long intergenic non-protein coding RNA 2119	ncRNA
30.6	chr1	28458939	28459063	+	0.266667	NA	intron (NM_001350161, intron 3 of 14)	intron (NM_001350161, intron 3 of 14)	20851	NM_023923	65979	Hs.225641	NM_023923	ENSG00000204138	PHACTR4	PPP1R124	phosphatase and actin regulator 4	protein-coding
49.3667-2	chr1	90467179	90467546	+	0.266667	NA	Intergenic	Intergenic	-190388	NR_145742	109616984		NR_145742	ENSG00000199666	SNORD3G	-	small nucleolar RNA, C/D box 3G	snoRNA
69.5334	chr19	42379236	42379553	+	0.266667	NA	TTS (NM_001410)	TTS (NM_001410)	10903	NM_032488	84518	Hs.148590	NM_032488	ENSG00000105427	CNFN	PLAC8L2	cornifelin	protein-coding
101	chr8	99440241	99440732	+	0.266667	NA	intron (NM_017890, intron 22 of 61)	intron (NM_017890, intron 22 of 61)	96244	NR_030329	693184		NR_030329	ENSG00000207804	MIR599	MIRN599|hsa-mir-599	microRNA 599	ncRNA
21.0667-12	chr8	138981374	138981552	+	0.266667	NA	Intergenic	L1M4a2|LINE|L1	-67422	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
39.6-3	chr11	21214928	21215145	+	0.266667	NA	intron (NM_201551, intron 13 of 18)	THE1C|LTR|ERVL-MaLR	545450	NM_006157	4745	Hs.657172	NM_006157	ENSG00000165973	NELL1	IDH3GL|NRP1	neural EGFL like 1	protein-coding
31.8-12	chr8	68184615	68184763	+	0.266667	NA	intron (NM_024870, intron 35 of 39)	intron (NM_024870, intron 35 of 39)	-145684	NR_146186	116328	Hs.491941	NM_052958	ENSG00000165084	C8orf34	VEST-1|VEST1	chromosome 8 open reading frame 34	protein-coding
48.2334-2	chr3	95879373	95879844	+	0.266667	NA	Intergenic	Intergenic	-196415	NR_077228	100287639	Hs.591320	NR_077228	ENSG00000244681	MTHFD2P1	-	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1	pseudo
55.0666	chr7	94345553	94345910	+	0.266667	NA	Intergenic	Intergenic	46461	NR_147206	101927525	Hs.571263	NR_147206		COL1A2-AS1	TCONS_00013888|lncRNA8975-1	COL1A2 antisense RNA 1	ncRNA
73	chr17	49998088	49998537	+	0.266667	NA	Intergenic	Intergenic	-3088	NM_005220	1747	Hs.134194	NM_005220	ENSG00000064195	DLX3	AI4|TDO	distal-less homeobox 3	protein-coding
50.1333-3	chr3	46651023	46651269	+	0.266667	NA	Intergenic	L1MCa|LINE|L1	38621	NM_001195442	100132146	Hs.679623	NM_001195442	ENSG00000283473	FAM240A	-	family with sequence similarity 240 member A	protein-coding
75.9001	chr15	89096568	89096954	+	0.266667	NA	intron (NM_007011, intron 2 of 14)	intron (NM_007011, intron 2 of 14)	8305	NM_152924	11057	Hs.122337	NM_007011	ENSG00000140526	ABHD2	HS1-2|LABH2|PHPS1-2	abhydrolase domain containing 2	protein-coding
53.6667	chr13	59769694	59770109	+	0.266667	NA	intron (NM_001258366, intron 26 of 26)	intron (NM_001258366, intron 26 of 26)	-242817	NR_109838	100874195	Hs.664101	NR_046539	ENSG00000227528	DIAPH3-AS1	-	DIAPH3 antisense RNA 1	ncRNA
27.1667-6	chr4	144992642	144992832	+	0.266667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	104645	NM_001318367	10393	Hs.480876	NM_014885	ENSG00000164162	ANAPC10	APC10|DOC1	anaphase promoting complex subunit 10	protein-coding
46.8-4	chr2	132525446	132525800	+	0.266667	NA	intron (NM_001508, intron 1 of 1)	intron (NM_001508, intron 1 of 1)	91912	NR_162099	113218485		NR_162099		MIR9986	-	microRNA 9986	ncRNA
30.4-10	chr6	91134143	91134282	+	0.266667	NA	Intergenic	L2c|LINE|L2	-387448	NR_039786	100616174		NR_039786	ENSG00000263734	MIR4643	-	microRNA 4643	ncRNA
36.5334	chr20	55261245	55261511	+	0.266667	NA	Intergenic	Intergenic	-161665	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA
46.1333-3	chr14	61394450	61394708	+	0.266667	NA	intron (NM_006255, intron 2 of 13)	intron (NM_006255, intron 2 of 13)	73136	NM_006255	5583	Hs.333907	NM_006255	ENSG00000027075	PRKCH	PKC-L|PKCL|PRKCL|nPKC-eta	protein kinase C eta	protein-coding
40.7333-8	chr5	115589327	115589632	+	0.266667	NA	intron (NM_001164469, intron 3 of 3)	intron (NM_001164469, intron 3 of 3)	-12676	NR_109875	101927100	Hs.745340	NR_109874		LOC101927100	-	uncharacterized LOC101927100	ncRNA
68.1334	chr11	68093386	68093920	+	0.266667	NA	intron (NM_001277, intron 2 of 11)	intron (NM_001277, intron 2 of 11)	27735	NM_001277	1119	Hs.77221	NM_001277	ENSG00000110721	CHKA	CHK|CK|CKI|EK	choline kinase alpha	protein-coding
54.9334	chr1	40114396	40114825	+	0.266667	NA	Intergenic	L1PA16|LINE|L1	-17140	NM_000310	5538	Hs.3873	NM_000310	ENSG00000131238	PPT1	CLN1|INCL|PPT	palmitoyl-protein thioesterase 1	protein-coding
50.0334	chr2	70232937	70233124	+	0.266667	NA	intron (NR_147232, intron 1 of 10)	intron (NR_147232, intron 1 of 10)	15598	NM_022037	7072	Hs.413123	NM_022037	ENSG00000116001	TIA1	TIA-1|WDM	TIA1 cytotoxic granule associated RNA binding protein	protein-coding
37.2-9	chr5	94027854	94028085	+	0.266667	NA	intron (NR_028080, intron 3 of 8)	MER21B|LTR|ERVL	83694	NM_032042	83989	Hs.600086	NM_032042	ENSG00000113391	FAM172A	C5orf21|Toupee	family with sequence similarity 172 member A	protein-coding
41.4667-4	chr7	7122533	7122740	+	0.266667	NA	Intergenic	Intergenic	-25850	NR_034022	100131257	Hs.551110	NR_034022		LOC100131257	-	zinc finger protein 655 pseudogene	pseudo
57.9334	chr15	55375809	55376065	+	0.266667	NA	intron (NM_001204450, intron 5 of 8)	AluJb|SINE|Alu	-2903	NR_030358	693213		NR_030358	ENSG00000283891	MIR628	MIRN628|hsa-mir-628|mir-628	microRNA 628	ncRNA
67.1998	chr10	90331199	90331690	+	0.266667	NA	Intergenic	AluYb8|SINE|Alu	209361	NR_110657	101926942	Hs.382666	NR_110657	ENSG00000236373	LINC02653	-	long intergenic non-protein coding RNA 2653	ncRNA
64.8	chr9	88790522	88790807	+	0.266667	NA	Intergenic	L1MC4|LINE|L1	-44759	NR_036252	100423015		NR_036252	ENSG00000265873	MIR4289	-	microRNA 4289	ncRNA
40.8667-5	chr9	100464594	100464811	+	0.266667	NA	intron (NM_001198812, intron 1 of 9)	L2b|LINE|L2	-8447	NM_003692	8577	Hs.598100	NM_003692	ENSG00000241697	TMEFF1	C9orf2|CT120.1|H7365|TR-1	transmembrane protein with EGF like and two follistatin like domains 1	protein-coding
85.8	chr14	70361373	70361811	+	0.266667	NA	intron (NM_001202548, intron 3 of 5)	intron (NM_001202548, intron 3 of 5)	-1909	NM_016468	51241	Hs.709581	NM_016468	ENSG00000133983	COX16	C14orf112|HSPC203|hCOX16	cytochrome c oxidase assembly factor COX16	protein-coding
31.3333-12	chr8	31202029	31202192	+	0.266667	NA	Intergenic	Intergenic	-168754	NM_001015508	29942	Hs.373778	NM_013357	ENSG00000172733	PURG	PURG-A|PURG-B|PURGA|PURGB	purine rich element binding protein G	protein-coding
42.6001-2	chrX	144842333	144842544	+	0.266667	NA	Intergenic	Intergenic	-405065	NM_001009614	494118		NM_001009614	ENSG00000203923	SPANXN1	CT11.6	SPANX family member N1	protein-coding
39.5999-2	chr14	71787540	71787815	+	0.266667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-144494	NM_001370270	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G protein signaling 6	protein-coding
65.5334-2	chr2	75298016	75298425	+	0.266667	NA	Intergenic	Intergenic	-98700	NM_001058	6869	Hs.633301	NM_001058	ENSG00000115353	TACR1	NK1R|NKIR|SPR|TAC1R	tachykinin receptor 1	protein-coding
56.7334	chr18	64591458	64591867	+	0.266667	NA	Intergenic	Intergenic	-331607	NR_033983	400654	Hs.434235	NR_033983	ENSG00000266952	LINC01538	-	long intergenic non-protein coding RNA 1538	ncRNA
36.8-6	chr8	134214417	134214694	+	0.266667	NA	Intergenic	L1MC5|LINE|L1	328059	NR_125424	101927822	Hs.129114	NR_125424	ENSG00000253593	LOC101927822	-	uncharacterized LOC101927822	ncRNA
48-5	chr9	37956532	37956755	+	0.266667	NA	intron (NM_003028, intron 3 of 5)	intron (NM_003028, intron 3 of 5)	-52290	NR_024873	92014	Hs.634120	NM_033412	ENSG00000122696	SLC25A51	CG7943|MCART1	solute carrier family 25 member 51	protein-coding
47.9001	chr4	60754349	60754553	+	0.266667	NA	Intergenic	MLT1E1A|LTR|ERVL-MaLR	-168168	NR_039652	100616450		NR_039652	ENSG00000265829	MIR548AG1	-	microRNA 548ag-1	ncRNA
28.9667-5	chr3	190012050	190012158	+	0.266667	NA	intron (NM_001134418, intron 1 of 14)	intron (NM_001134418, intron 1 of 14)	108793	NM_018192	55214	Hs.374191	NM_018192	ENSG00000090530	P3H2	LEPREL1|MCVD|MLAT4	prolyl 3-hydroxylase 2	protein-coding
32.2667	chr12	46402239	46402457	+	0.266667	NA	intron (NR_125381, intron 2 of 2)	intron (NR_125381, intron 2 of 2)	18241	NR_125381	100288798	Hs.525922	NR_125377		LOC100288798	-	uncharacterized LOC100288798	ncRNA
54.5001	chr2	71889216	71889496	+	0.266667	NA	Intergenic	LTR67B|LTR|ERVL	258506	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
42.5334	chr11	21042106	21042311	+	0.266667	NA	intron (NM_201551, intron 12 of 18)	Charlie29a|DNA|hAT-Charlie	372622	NM_006157	4745	Hs.657172	NM_006157	ENSG00000165973	NELL1	IDH3GL|NRP1	neural EGFL like 1	protein-coding
34.0667-7	chr4	38517664	38517858	+	0.266667	NA	non-coding (NR_149076, exon 3 of 3)	non-coding (NR_149076, exon 3 of 3)	5419	NR_110951	101928776	Hs.586147	NR_110951	ENSG00000249534	LINC01258	-	long intergenic non-protein coding RNA 1258	ncRNA
49.9001	chr4	85242744	85242989	+	0.266667	NA	Intergenic	L1MB3|LINE|L1	-232284	NM_001025616	83478	Hs.444229	NM_031305	ENSG00000138639	ARHGAP24	FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP	Rho GTPase activating protein 24	protein-coding
61.0001	chr5	37642895	37643173	+	0.266667	NA	intron (NM_001345998, intron 10 of 17)	L1MA3|LINE|L1	191788	NM_001278098	2668	Hs.248114	NM_000514	ENSG00000168621	GDNF	ATF|ATF1|ATF2|HFB1-GDNF|HSCR3	glial cell derived neurotrophic factor	protein-coding
72.9332	chr7	34122873	34123281	+	0.266667	NA	intron (NM_133468, intron 14 of 15)	intron (NM_133468, intron 14 of 15)	217538	NM_001365308	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
50.3667	chr8	3338059	3338266	+	0.266667	NA	intron (NM_033225, intron 23 of 69)	intron (NM_033225, intron 23 of 69)	-609711	NR_125426	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA
39.3333-7	chr8	105398586	105398846	+	0.266667	NA	intron (NM_001362837, intron 1 of 7)	MER1B|DNA|hAT-Charlie	79173	NM_001362837	23414	Hs.431009	NM_012082	ENSG00000169946	ZFPM2	DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2	zinc finger protein, FOG family member 2	protein-coding
45.7667-2	chr14	54793770	54794023	+	0.266667	NA	TTS (NM_001161577)	TTS (NM_001161577)	39063	NM_001161577	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding
35.2-6	chr5	53610907	53611123	+	0.266667	NA	intron (NR_134474, intron 3 of 5)	intron (NR_134474, intron 3 of 5)	50376	NM_002495	4724	Hs.528222	NM_002495	ENSG00000164258	NDUFS4	AQDQ|CI-18|CI-18 kDa|CI-AQDQ|MC1DN1	NADH:ubiquinone oxidoreductase subunit S4	protein-coding
20.4-13	chr5	126666405	126666481	+	0.266667	NA	Intergenic	Intergenic	34738	NM_207408	389320	Hs.177983	NM_207408	ENSG00000196900	TEX43	C5orf48|Tseg7	testis expressed 43	protein-coding
48.2-3	chr12	128168031	128168275	+	0.266667	NA	Intergenic	LTR8|LTR|ERV1	49936	NR_104648	101927694	Hs.524849	NR_104648	ENSG00000256659	LINC02368	-	long intergenic non-protein coding RNA 2368	ncRNA
48.2-4	chr3	28978171	28978502	+	0.266667	NA	Intergenic	Intergenic	302603	NR_109804	100873979	Hs.99391	NR_109804		RBMS3-AS3	-	RBMS3 antisense RNA 3	ncRNA
27.0667-13	chr8	69001869	69002023	+	0.266667	NA	intron (NR_039986, intron 2 of 4)	intron (NR_039986, intron 2 of 4)	102244	NR_039986	100505718	Hs.122386	NR_039986	ENSG00000253658	LINC01592	-	long intergenic non-protein coding RNA 1592	ncRNA
66.2667	chr10	7432347	7432886	+	0.266667	NA	Intergenic	Intergenic	-21130	NM_001029880	57713	Hs.407983	NM_001018039	ENSG00000198879	SFMBT2	-	Scm like with four mbt domains 2	protein-coding
34.8667-2	chr10	79159890	79160243	+	0.266667	NA	intron (NM_020338, intron 3 of 24)	intron (NM_020338, intron 3 of 24)	91100	NM_020338	57178	Hs.193118	NM_020338	ENSG00000108175	ZMIZ1	MIZ|RAI17|TRAFIP10|ZIMP10	zinc finger MIZ-type containing 1	protein-coding
50.9001	chr5	44471018	44471275	+	0.266667	NA	Intergenic	L1M4a1|LINE|L1	39136	NR_131946	102723839	Hs.561412	NR_131946		LINC02224	BRCAT107	long intergenic non-protein coding RNA 2224	ncRNA
40.3-3	chr15	37988166	37988382	+	0.266667	NA	intron (NM_001370737, intron 12 of 13)	L1MB3|LINE|L1	-52119	NR_120330	101928227	Hs.602381	NR_120330	ENSG00000259225	LINC02345	-	long intergenic non-protein coding RNA 2345	ncRNA
52.7333	chr1	178174644	178175102	+	0.266667	NA	intron (NM_170692, intron 1 of 17)	intron (NM_170692, intron 1 of 17)	80769	NM_170692	9462	Hs.496139	NM_004841	ENSG00000075391	RASAL2	NGAP	RAS protein activator like 2	protein-coding
49.7333-3	chr2	132437347	132437686	+	0.266667	NA	intron (NM_001508, intron 1 of 1)	intron (NM_001508, intron 1 of 1)	3805	NR_162099	113218485		NR_162099		MIR9986	-	microRNA 9986	ncRNA
81.8	chr10	20310328	20310938	+	0.266667	NA	Intergenic	Intergenic	-241337	NR_039822	100616383		NR_039822	ENSG00000265372	MIR4675	-	microRNA 4675	ncRNA
83.1332	chr2	51139156	51139744	+	0.266667	NA	intron (NR_135237, intron 2 of 10)	intron (NR_135237, intron 2 of 10)	106849	NR_135237	730100	Hs.640140	NR_135237	ENSG00000231918	LOC730100	-	uncharacterized LOC730100	ncRNA
39.5667-4	chr3	84221431	84221757	+	0.266667	NA	Intergenic	MER21B|LTR|ERVL	647981	NR_033860	440970	Hs.411049	NR_033860	ENSG00000242641	LINC00971	-	long intergenic non-protein coding RNA 971	ncRNA
68.2001-2	chr6	163174682	163175032	+	0.266667	NA	intron (NM_001080379, intron 4 of 4)	MIRb|SINE|MIR	17145	NR_122120	729658	Hs.728991	NR_122120		PACRG-AS3	-	PACRG antisense RNA 3	ncRNA
34.2667	chr1	91815270	91815570	+	0.266667	NA	intron (NR_036634, intron 2 of 17)	MIRc|SINE|MIR	70731	NM_003243	7049	Hs.482390	NM_003243	ENSG00000069702	TGFBR3	BGCAN|betaglycan	transforming growth factor beta receptor 3	protein-coding
28.6667-11	chr6	86398693	86398887	+	0.266667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-538738	NM_000865	3354	Hs.1611	NM_000865	ENSG00000168830	HTR1E	5-HT1E	5-hydroxytryptamine receptor 1E	protein-coding
57.2334	chr3	149282265	149282717	+	0.266667	NA	Intergenic	Intergenic	50947	NM_001184723	116441	Hs.22026	NM_138786	ENSG00000163762	TM4SF18	L6D	transmembrane 4 L six family member 18	protein-coding
48.3333-3	chr14	47322051	47322352	+	0.266667	NA	intron (NM_001113498, intron 1 of 16)	intron (NM_001113498, intron 1 of 16)	21045	NM_182830	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
31.5334-3	chr3	182899294	182899454	+	0.266667	NA	intron (NM_014616, intron 28 of 29)	AluSx1|SINE|Alu	81164	NM_020640	54165	Hs.592789	NM_020640	ENSG00000043093	DCUN1D1	DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3	defective in cullin neddylation 1 domain containing 1	protein-coding
81.8001	chrX	85828077	85828423	+	0.266667	NA	Intergenic	L1PA15|LINE|L1	-7530	NR_031710	100302171		NR_031710	ENSG00000283435	MIR1321	MIRN1321|hsa-mir-1321	microRNA 1321	ncRNA
29.3334	chr5	163914691	163914855	+	0.266667	NA	Intergenic	Intergenic	409154	NM_013283	27430	Hs.54642	NM_013283	ENSG00000038274	MAT2B	MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR	methionine adenosyltransferase 2B	protein-coding
44.9-3	chr2	137867292	137867469	+	0.266667	NA	Intergenic	Intergenic	60552	NR_120402	101928273	Hs.560928	NR_120402		LOC101928273	-	uncharacterized LOC101928273	ncRNA
33.8667-4	chr11	116737064	116737369	+	0.266667	NA	Intergenic	L1PB4|LINE|L1	35771	NM_032725	84811	Hs.437341	NM_032725	ENSG00000137656	BUD13	Cwc26|fSAP71	BUD13 homolog	protein-coding
56.8667	chr1	86587821	86588096	+	0.266667	NA	intron (NR_135837, intron 4 of 4)	L2c|LINE|L2	40880	NM_012128	22802	Hs.567422	NM_012128	ENSG00000016602	CLCA4	CaCC|CaCC2	chloride channel accessory 4	protein-coding
26.4667-4	chr3	33796042	33796245	+	0.266667	NA	Intergenic	Intergenic	-2428	NM_001256192	10015	Hs.475896	NM_013374	ENSG00000170248	PDCD6IP	AIP1|ALIX|DRIP4|HP95	programmed cell death 6 interacting protein	protein-coding
63.2667-2	chr9	35140529	35141094	+	0.266667	NA	Intergenic	MER52-int|LTR|ERV1	-21198	NM_001371186								
31.8	chr1	14122713	14122958	+	0.266667	NA	Intergenic	Intergenic	297138	NR_149058	105376762	Hs.568591	NR_149058		KAZN-AS1	-	KAZN antisense RNA 1	ncRNA
55.7334-3	chr5	18753577	18753831	+	0.266667	NA	Intergenic	Intergenic	946430	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
83.4001	chr2	164259222	164259652	+	0.266667	NA	Intergenic	L1ME2|LINE|L1	309058	NM_001303422	2888	Hs.411881	NM_004490	ENSG00000115290	GRB14	-	growth factor receptor bound protein 14	protein-coding
58.7001	chr18	76923817	76924303	+	0.266667	NA	intron (NM_001306089, intron 21 of 30)	intron (NM_001306089, intron 21 of 30)	92995	NM_001025090	4155	Hs.551713	NM_002385	ENSG00000197971	MBP	-	myelin basic protein	protein-coding
60.1999-3	chr7	10755703	10756181	+	0.266667	NA	intron (NR_147499, intron 1 of 2)	MIRb|SINE|MIR	24002	NR_147499	79150	Hs.571301	NM_024304	ENSG00000283117	MGC4859	-	uncharacterized LOC79150	ncRNA
53.2667	chr5	12436879	12437164	+	0.266667	NA	Intergenic	Intergenic	-137836	NR_033383	404663	Hs.552273	NR_033383		LINC01194	CT49|TAG	long intergenic non-protein coding RNA 1194	ncRNA
71.4	chr7	28389264	28389757	+	0.266667	NA	intron (NM_182899, intron 1 of 9)	intron (NM_182899, intron 1 of 9)	-23008	NM_182898	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5|CREBPA	cAMP responsive element binding protein 5	protein-coding
43.8-3	chr12	107580501	107580792	+	0.266667	NA	promoter-TSS (NM_001017523)	promoter-TSS (NM_001017523)	-228	NM_001017523	121551	Hs.271272	NM_152322	ENSG00000151136	BTBD11	ABTB2B	BTB domain containing 11	protein-coding
29.2333-4	chr2	102094778	102094931	+	0.266667	NA	intron (NM_001320978, intron 1 of 11)	(AT)n|Simple_repeat|Simple_repeat	-9750	NM_001320986	3554	Hs.701982	NM_000877	ENSG00000115594	IL1R1	CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80	interleukin 1 receptor type 1	protein-coding
57.5-2	chr15	36031551	36031840	+	0.266667	NA	Intergenic	Intergenic	104839	NR_039735	100616293		NR_039735	ENSG00000265098	MIR4510	mir-4510	microRNA 4510	ncRNA
50.9	chr9	116645857	116646265	+	0.266667	NA	intron (NM_014010, intron 16 of 21)	MIRb|SINE|MIR	41154	NM_198186	23245	Hs.601562	NM_014010	ENSG00000148219	ASTN2	bA67K19.1	astrotactin 2	protein-coding
43.7334	chr13	79555341	79555741	+	0.266667	NA	3' UTR (NM_001161407, exon 8 of 8)	3' UTR (NM_001161407, exon 8 of 8)	-11186	NR_125772	103724388	Hs.434862	NR_125772	ENSG00000227676	LINC01068	-	long intergenic non-protein coding RNA 1068	ncRNA
35.6667-4	chr9	114512564	114512792	+	0.266667	NA	Intergenic	MLT1E1A|LTR|ERVL-MaLR	-7205	NM_001173425	25861	Hs.93836	NM_015404	ENSG00000095397	WHRN	CIP98|DFNB31|PDZD7B|USH2D|WI	whirlin	protein-coding
30.2667-2	chr18	13634901	13635112	+	0.266667	NA	intron (NM_001003675, intron 2 of 2)	L1M1|LINE|L1	-6752	NM_001276251	753	Hs.697787	NM_004338	ENSG00000168675	LDLRAD4	C18orf1	low density lipoprotein receptor class A domain containing 4	protein-coding
74.4668	chr6	145420335	145420680	+	0.266667	NA	Intergenic	Intergenic	266370	NM_001368132	7957	Hs.486696	NM_005670	ENSG00000112425	EPM2A	EPM2|MELF	EPM2A glucan phosphatase, laforin	protein-coding
40.3334	chr16	76281801	76282118	+	0.266667	NA	intron (NR_136213, intron 1 of 23)	MER58D|DNA|hAT-Charlie	4558	NR_136213	85445	Hs.461389	NM_033401	ENSG00000152910	CNTNAP4	CASPR4	contactin associated protein like 4	protein-coding
68.7334	chr4	28933956	28934304	+	0.266667	NA	Intergenic	Intergenic	-62654	NR_146499	102723764		NR_146499		LINC02364	-	long intergenic non-protein coding RNA 2364	ncRNA
51.9334-2	chr7	130559615	130560030	+	0.266667	NA	intron (NM_001290033, intron 12 of 19)	intron (NM_001290033, intron 12 of 19)	16369	NR_024086	53844	Hs.6421	NR_024086		COPG2IT1	CIT1|COPG2AS|DKFZP761N09121|NCRNA00170	COPG2 imprinted transcript 1	ncRNA
28.4334	chr8	108100556	108100772	+	0.266667	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-17044	NM_178565	340419	Hs.444834	NM_178565	ENSG00000147655	RSPO2	CRISTIN2|HHRRD|TETAMS2	R-spondin 2	protein-coding
73.8	chr15	84882224	84882637	+	0.266667	NA	Intergenic	AluJb|SINE|Alu	-2231	NM_001287761	9154	Hs.459187	NM_004213	ENSG00000156222	SLC28A1	CNT1|HCNT1	solute carrier family 28 member 1	protein-coding
66.2666	chrX	149816738	149817160	+	0.266667	NA	Intergenic	L1M5|LINE|L1	-8759	NR_109813	101241891	Hs.744829	NR_109813	ENSG00000280752	LINC00850	KUCG1	long intergenic non-protein coding RNA 850	ncRNA
60.5333-2	chr12	37905674	37905962	+	0.266667	NA	Intergenic	ALR/Alpha|Satellite|centr	-410956	NM_001013620	144245	Hs.259305	NM_001013620	ENSG00000175548	ALG10B	ALG10|KCR1	ALG10 alpha-1,2-glucosyltransferase B	protein-coding
36.4-10	chr5	105765508	105765693	+	0.266667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	666126	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
29.2334	chr17	49065758	49065982	+	0.266667	NA	Intergenic	Intergenic	-66590	NM_001159388	124872	Hs.374679	NM_153446	ENSG00000167080	B4GALNT2	B4GALT|GALGT2	beta-1,4-N-acetyl-galactosaminyltransferase 2	protein-coding
38.9333-4	chr14	62764041	62764292	+	0.266667	NA	intron (NM_172375, intron 9 of 9)	L1PA15|LINE|L1	281292	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
66.7667-2	chr2	9536023	9536526	+	0.266667	NA	intron (NM_003183, intron 3 of 18)	intron (NM_003183, intron 3 of 18)	19556	NM_003183	6868	Hs.404914	NM_003183	ENSG00000151694	ADAM17	ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE	ADAM metallopeptidase domain 17	protein-coding
50.1667-2	chr6	152095404	152095684	+	0.266667	NA	intron (NM_001122741, intron 8 of 8)	intron (NM_001122741, intron 8 of 8)	72743	NM_001347702	23345	Hs.12967	NM_015293	ENSG00000131018	SYNE1	8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2	spectrin repeat containing nuclear envelope protein 1	protein-coding
37.4333-9	chr2	134020556	134020983	+	0.266667	NA	Intergenic	Intergenic	-99166	NM_001371457								
78.5334	chr9	1857131	1857509	+	0.266667	NA	Intergenic	Intergenic	-158027	NM_139045	6595	Hs.298990	NM_003070	ENSG00000080503	SMARCA2	BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
43.0667-4	chr13	75706085	75706300	+	0.266667	NA	intron (NM_001306080, intron 1 of 30)	MIR|SINE|MIR	-54128	NM_001366633	4008	Hs.207631	NM_005358	ENSG00000136153	LMO7	FBX20|FBXO20|LMO7b|LOMP	LIM domain 7	protein-coding
21.8667-3	chr13	86984168	86984389	+	0.266667	NA	Intergenic	Intergenic	72358	NR_132371	106144533	Hs.525107	NR_132371		LINC00430	-	long intergenic non-protein coding RNA 430	ncRNA
30.1333-4	chr2	29398729	29398890	+	0.266667	NA	intron (NM_004304, intron 4 of 28)	intron (NM_004304, intron 4 of 28)	76568	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA
50.8667	chr22	27642453	27642689	+	0.266667	NA	Intergenic	Intergenic	159185	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	MN1 proto-oncogene, transcriptional regulator	protein-coding
49.7334-2	chr6	90052122	90052561	+	0.266667	NA	intron (NM_021813, intron 5 of 8)	L1MC|LINE|L1	157872	NM_032602	84694	Hs.334499	NM_032602	ENSG00000135355	GJA10	CX62	gap junction protein alpha 10	protein-coding
21.9334	chr18	1674770	1674873	+	0.266667	NA	Intergenic	L1MEd|LINE|L1	-315192	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
55.8666	chr14	61868834	61869180	+	0.266667	NA	intron (NM_001367656, intron 1 of 7)	L1ME1|LINE|L1	56304	NM_001367654	83851	Hs.404139	NM_031914	ENSG00000139973	SYT16	CHR14SYT|SYT14L|Strep14|syt14r	synaptotagmin 16	protein-coding
34.6-11	chr6	55475433	55475611	+	0.266667	NA	intron (NR_109869, intron 3 of 4)	L1ME3A|LINE|L1	103692	NM_019036	54511	Hs.147054	NM_019036	ENSG00000146151	HMGCLL1	bA418P12.1|er-cHL	3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1	protein-coding
47.5-3	chr3	66966368	66966700	+	0.266667	NA	Intergenic	Intergenic	-31773	NM_032505	84541	Hs.116665	NM_032505	ENSG00000163376	KBTBD8	TA-KRP|TAKRP	kelch repeat and BTB domain containing 8	protein-coding
56.3667-2	chr14	73088016	73088303	+	0.266667	NA	exon (NM_021239, exon 6 of 19)	exon (NM_021239, exon 6 of 19)	29625	NM_021239	58517	Hs.531106	NM_021239	ENSG00000119707	RBM25	NET52|RED120|RNPC7|S164|Snu71|fSAP94	RNA binding motif protein 25	protein-coding
64.7668	chr11	22349841	22350174	+	0.266667	NA	intron (NM_020346, intron 3 of 11)	intron (NM_020346, intron 3 of 11)	11626	NM_020346	57084	Hs.242821	NM_020346	ENSG00000091664	SLC17A6	DNPI|VGLUT2	solute carrier family 17 member 6	protein-coding
54.3668	chr15	20657887	20658207	+	0.266667	NA	Intergenic	Intergenic	95698	NR_027411	729786	Hs.592025	NR_027411	ENSG00000181984	GOLGA8CP	GOLGA8C	golgin A8 family member C, pseudogene	pseudo
52.6-3	chr20	59727796	59728234	+	0.266667	NA	intron (NM_183246, intron 1 of 11)	intron (NM_183246, intron 1 of 11)	6805	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding
38.1001	chr13	82987919	82988120	+	0.266667	NA	Intergenic	L2a|LINE|L2	894374	NM_052910	114798	Hs.415478	NM_052910	ENSG00000178235	SLITRK1	LRRC12|TTM	SLIT and NTRK like family member 1	protein-coding
29.4-13	chr8	71383503	71383643	+	0.266667	NA	intron (NM_001370336, intron 2 of 17)	L1ME3Cz|LINE|L1	-21504	NM_001288574	2138	Hs.444971	NM_000503	ENSG00000104313	EYA1	BOP|BOR|BOS1|OFC1	EYA transcriptional coactivator and phosphatase 1	protein-coding
34.3667-2	chr7	129105226	129105378	+	0.266667	NA	Intergenic	MER5B|DNA|hAT-Charlie	-20969	NR_002144	407835	Hs.592273	NR_002144		LOC407835	-	mitogen-activated protein kinase kinase 2 pseudogene	pseudo
34.3999	chr1	113516632	113516861	+	0.266667	NA	intron (NM_001142782, intron 1 of 20)	L1MC3|LINE|L1	126231	NM_152900	260425	Hs.486189	NM_020965	ENSG00000081026	MAGI3	MAGI-3|dJ730K3.2	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
39.3334-3	chr4	142388627	142388811	+	0.266667	NA	intron (NM_001331040, intron 7 of 25)	MER57-int|LTR|ERV1	457816	NM_001331040	8821	Hs.176376	NM_003866	ENSG00000109452	INPP4B	-	inositol polyphosphate-4-phosphatase type II B	protein-coding
37.8334-2	chr3	8002069	8002344	+	0.266667	NA	intron (NR_110131, intron 1 of 3)	HAL1|LINE|L1	14101	NR_110131	101927394	Hs.517767	NR_110131	ENSG00000227110	LOC101927394	-	uncharacterized LOC101927394	ncRNA
85.2001	chr2	121787255	121787726	+	0.266667	NA	Intergenic	(ATCT)n|Simple_repeat|Simple_repeat	31839	NM_004622	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding
62.8667	chr6	92967901	92968208	+	0.266667	NA	Intergenic	L1M5|LINE|L1	451505	NM_001288629	2045	Hs.73962	NM_004440	ENSG00000135333	EPHA7	EHK-3|EHK3|EK11|HEK11	EPH receptor A7	protein-coding
44.9667-2	chr7	46660696	46661068	+	0.266667	NA	Intergenic	Intergenic	36240	NR_134575	730338	Hs.640207	NR_134575	ENSG00000233539	LOC730338	-	uncharacterized LOC730338	ncRNA
51.4666	chr1	6082535	6082819	+	0.266667	NA	intron (NM_001199863, intron 4 of 13)	intron (NM_001199863, intron 4 of 13)	36789	NM_001199862	8514	Hs.440497	NM_003636	ENSG00000069424	KCNAB2	AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2	potassium voltage-gated channel subfamily A regulatory beta subunit 2	protein-coding
57	chr19	29951976	29952490	+	0.266667	NA	intron (NR_045557, intron 1 of 9)	Looper|DNA|PiggyBac	9994	NM_003796	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	URI1 prefoldin like chaperone	protein-coding
45.0001	chr10	32155583	32155911	+	0.266667	NA	Intergenic	L2b|LINE|L2	-99322	NM_004521	3799	Hs.327736	NM_004521	ENSG00000170759	KIF5B	HEL-S-61|KINH|KNS|KNS1|UKHC	kinesin family member 5B	protein-coding
42.2334	chr11	68968162	68968335	+	0.266667	NA	Intergenic	Intergenic	12738	NM_198923	116512	Hs.527802	NM_198923	ENSG00000172938	MRGPRD	MRGD|TGR7	MAS related GPR family member D	protein-coding
43.6-4	chr5	24883920	24884358	+	0.266667	NA	Intergenic	Intergenic	-43556	NR_037896	340107	Hs.145181	NR_037896	ENSG00000248908	LINC02239	-	long intergenic non-protein coding RNA 2239	ncRNA
71.2	chr4	48970454	48970773	+	0.266667	NA	Intergenic	MLT2B4|LTR|ERVL	-15662	NM_025087	80157	Hs.479703	NM_025087	ENSG00000109182	CWH43	CWH43-C|PGAP2IP	cell wall biogenesis 43 C-terminal homolog	protein-coding
34-3	chr14	52767107	52767281	+	0.266667	NA	intron (NM_001130701, intron 10 of 11)	L2a|LINE|L2	24413	NM_198066	64841	Hs.478025	NM_198066	ENSG00000100522	GNPNAT1	GNA1|GNPNAT|Gpnat1	glucosamine-phosphate N-acetyltransferase 1	protein-coding
74.3999	chr10	17160348	17160797	+	0.266667	NA	intron (NM_001351221, intron 3 of 8)	AluSg7|SINE|Alu	-30755	NM_001081	8029	Hs.166206	NM_001081	ENSG00000107611	CUBN	IFCR|MGA1|gp280	cubilin	protein-coding
32.7999	chr1	201069922	201070148	+	0.266667	NA	intron (NM_000069, intron 17 of 43)	MamTip2|DNA|hAT-Tip100	42391	NM_000069	779	Hs.1294	NM_000069	ENSG00000081248	CACNA1S	CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP	calcium voltage-gated channel subunit alpha1 S	protein-coding
49.5667-2	chr2	46693760	46694002	+	0.266667	NA	Intergenic	Intergenic	-5079	NM_014011	9655	Hs.468426	NM_014011	ENSG00000171150	SOCS5	CIS6|CISH6|Cish5|SOCS-5	suppressor of cytokine signaling 5	protein-coding
36.9333-4	chr19	33259436	33259617	+	0.266667	NA	Intergenic	Intergenic	-33676	NM_019849	56301	Hs.58679	NM_019849	ENSG00000130876	SLC7A10	ASC1|HASC-1|asc-1	solute carrier family 7 member 10	protein-coding
26.2-15	chr3	87699917	87700062	+	0.266667	NA	Intergenic	Intergenic	-92717	NM_001322208	3355	Hs.248136	NM_000866	ENSG00000179097	HTR1F	5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77	5-hydroxytryptamine receptor 1F	protein-coding
41-6	chr2	60880927	60881430	+	0.266667	NA	promoter-TSS (NM_001291746)	promoter-TSS (NM_001291746)	136	NR_033980	400957	Hs.170358	NR_033980	ENSG00000228414	LINC01185	-	long intergenic non-protein coding RNA 1185	ncRNA
22.9	chr1	5768773	5768924	+	0.266667	NA	Intergenic	Intergenic	93893	NR_039838	100616421		NR_039838	ENSG00000264101	MIR4689	mir-4689	microRNA 4689	ncRNA
55.9668	chr15	56558009	56558278	+	0.266667	NA	Intergenic	L1MB1|LINE|L1	-93006	NM_018365	55329	Hs.444483	NM_018365	ENSG00000138587	MNS1	SPATA40	meiosis specific nuclear structural 1	protein-coding
52.5333-2	chr3	82392281	82392592	+	0.266667	NA	intron (NR_147146, intron 3 of 8)	intron (NR_147146, intron 3 of 8)	406294	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
30.2666-5	chrX	103213034	103213202	+	0.266667	NA	Intergenic	AluJo|SINE|Alu	-1974	NM_001127688	56271	Hs.184736	NM_001080425	ENSG00000102409	BEX4	BEXL1	brain expressed X-linked 4	protein-coding
56.2001-2	chr20	18433127	18433484	+	0.266667	NA	intron (NM_001367611, intron 9 of 20)	AluSx|SINE|Alu	33725	NM_001351683	55184	Hs.472225	NM_018152	ENSG00000089091	DZANK1	ANKRD64|C20orf12|C20orf84	double zinc ribbon and ankyrin repeat domains 1	protein-coding
51.6667	chr3	100418333	100418547	+	0.266667	NA	intron (NM_001085451, intron 1 of 3)	L1MC5|LINE|L1	16901	NM_001085451	348801	Hs.591294	NM_001085451	ENSG00000206535	LNP1	NP3	leukemia NUP98 fusion partner 1	protein-coding
78.1332	chr18	76552127	76552651	+	0.266667	NA	intron (NR_015417, intron 2 of 2)	L1MB7|LINE|L1	23734	NR_015417	284276	Hs.390287	NR_015417	ENSG00000266256	LINC00908	-	long intergenic non-protein coding RNA 908	ncRNA
32.8667-4	chr2	219692099	219692478	+	0.266667	NA	Intergenic	Intergenic	64658	NM_005070	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding
35.2-2	chr11	8528806	8529078	+	0.266667	NA	intron (NM_001352388, intron 1 of 14)	MIR|SINE|MIR	65034	NM_001289061	65975	Hs.501833	NM_030906	ENSG00000130413	STK33	-	serine/threonine kinase 33	protein-coding
27.6-8	chr4	10465605	10465752	+	0.266667	NA	Intergenic	Intergenic	-8252	NM_053042	85460	Hs.455089	NM_053042	ENSG00000178163	ZNF518B	-	zinc finger protein 518B	protein-coding
62.7334	chr10	94459506	94459951	+	0.266667	NA	intron (NM_015188, intron 2 of 12)	LTR12C|LTR|ERV1	57187	NM_015188	23232	Hs.500598	NM_015188	ENSG00000108239	TBC1D12	-	TBC1 domain family member 12	protein-coding
43.7666-3	chr6	143802685	143803105	+	0.266667	NA	intron (NM_001100165, intron 10 of 11)	intron (NM_001100165, intron 10 of 11)	-40378	NM_001329953	84946	Hs.185675	NM_032860	ENSG00000135521	LTV1	C6orf93|dJ468K18.4	LTV1 ribosome biogenesis factor	protein-coding
41.4666-5	chr9	106018353	106018570	+	0.266667	NA	Intergenic	Intergenic	323920	NM_018112	55151	Hs.411925	NM_018112	ENSG00000095209	TMEM38B	C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1	transmembrane protein 38B	protein-coding
40.1333-5	chr4	73586123	73586549	+	0.266667	NA	intron (NM_001270391, intron 5 of 9)	intron (NM_001270391, intron 5 of 9)	34100	NM_177532	166824	Hs.529677	NM_177532	ENSG00000169435	RASSF6	-	Ras association domain family member 6	protein-coding
56.1334	chr1	54153620	54153996	+	0.266667	NA	promoter-TSS (NM_201546)	promoter-TSS (NM_201546)	-627	NM_201546	200008		NM_201546	ENSG00000157211	CDCP2	-	CUB domain containing protein 2	protein-coding
60.8666-2	chr2	52816982	52817231	+	0.266667	NA	Intergenic	L1MB7|LINE|L1	-114491	NR_039630	100616431		NR_039630	ENSG00000264975	MIR4431	-	microRNA 4431	ncRNA
15.2667-3	chr14	52564514	52564577	+	0.266667	NA	intron (NM_001353361, intron 1 of 7)	L2c|LINE|L2	11709	NM_001099652	283554	Hs.416214	NM_001099652	ENSG00000180998	GPR137C	TM7SF1L2	G protein-coupled receptor 137C	protein-coding
48.5001	chr2	193794798	193795104	+	0.266667	NA	Intergenic	Intergenic	-549318	NR_110222	101927406	Hs.385793	NR_110222	ENSG00000225539	LINC01821	-	long intergenic non-protein coding RNA 1821	ncRNA
47.5334	chr1	198982911	198983168	+	0.266667	NA	Intergenic	(ATCA)n|Simple_repeat|Simple_repeat	-33094	NR_126351	104266961	Hs.576501	NR_126351	ENSG00000235492	LINC01221	TCONS_00000366	long intergenic non-protein coding RNA 1221	ncRNA
26.1667-2	chr19	29205528	29205687	+	0.266667	NA	3' UTR (NM_006003, exon 2 of 2)	3' UTR (NM_006003, exon 2 of 2)	7544	NM_006003	7386	Hs.743307	NM_006003	ENSG00000169021	UQCRFS1	RIP1|RIS1|RISP|UQCR5	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	protein-coding
58.5334	chr6	17501247	17501586	+	0.266667	NA	TTS (NR_110855)	TTS (NR_110855)	9849	NR_110855	101928491	Hs.622876	NR_110855		LOC101928491	-	uncharacterized LOC101928491	ncRNA
66.6	chr20	53940302	53940615	+	0.266667	NA	Intergenic	Intergenic	-64749	NR_002189	391257	Hs.449977	NR_002189		SUMO1P1	PIC1L|UBL2|UBL6	SUMO1 pseudogene 1	pseudo
72.1668	chr9	125201298	125201640	+	0.266667	NA	intron (NM_001174153, intron 2 of 7)	intron (NM_001174153, intron 2 of 7)	927	NM_001174152	10244	Hs.19012	NM_005833	ENSG00000136933	RABEPK	RAB9P40|bA65N13.1|p40	Rab9 effector protein with kelch motifs	protein-coding
74.2665	chr7	20255465	20256011	+	0.266667	NA	Intergenic	Intergenic	38161	NR_134568	100506098	Hs.59203	NR_134567	ENSG00000233834	LOC100506098	-	uncharacterized LOC100506098	ncRNA
44.4667-2	chr2	25412649	25412838	+	0.266667	NA	TTS (NM_001351389)	TTS (NM_001351389)	-70153	NM_175629	1788	Hs.515840	NM_022552	ENSG00000119772	DNMT3A	DNMT3A2|M.HsaIIIA|TBRS	DNA methyltransferase 3 alpha	protein-coding
48.5333-5	chr3	72599322	72599688	+	0.266667	NA	Intergenic	Intergenic	64744	NR_135531	105377162	Hs.123457	NR_135531		LOC105377162	-	uncharacterized LOC105377162	ncRNA
26.8-12	chr3	183678829	183678999	+	0.266667	NA	intron (NM_001349426, intron 6 of 6)	intron (NM_001349426, intron 6 of 6)	-18883	NM_018023	55689	Hs.632575	NM_018023	ENSG00000163872	YEATS2	-	YEATS domain containing 2	protein-coding
35.1667-5	chr17	3523031	3523268	+	0.266667	NA	intron (NM_001258205, intron 13 of 17)	MER63C|DNA|hAT-Blackjack	-9297	NM_001321336	84690	Hs.351068	NM_032598	ENSG00000141255	SPATA22	NYD-SP20|NYDSP20	spermatogenesis associated 22	protein-coding
90.9001-2	chr6	88252019	88252577	+	0.266667	NA	Intergenic	Intergenic	-84949	NM_001370547	1268	Hs.75110	NM_016083	ENSG00000118432	CNR1	CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR	cannabinoid receptor 1	protein-coding
55.9334	chr8	109651885	109652396	+	0.266667	NA	intron (NM_001099743, intron 1 of 7)	L2b|LINE|L2	-3237	NM_001099748	55638	Hs.390738	NM_017786	ENSG00000147642	SYBU	GOLSYN|OCSYN|SNPHL	syntabulin	protein-coding
45.8-3	chr12	33720902	33721217	+	0.266667	NA	Intergenic	Intergenic	-281240	NM_198992	341359	Hs.118703	NM_198992	ENSG00000110975	SYT10	-	synaptotagmin 10	protein-coding
41.8667-2	chr12	20827188	20827568	+	0.266667	NA	intron (NM_001349920, intron 1 of 13)	MER4-int|LTR|ERV1	4830	NM_001349920	28234	Hs.504966	NM_019844	ENSG00000111700	SLCO1B3	HBLRR|LST-2|LST-3TM13|LST3|OATP-8|OATP1B3|OATP8|SLC21A8	solute carrier organic anion transporter family member 1B3	protein-coding
57.0334	chr11	33137322	33137750	+	0.266667	NA	intron (NM_001326, intron 3 of 20)	intron (NM_001326, intron 3 of 20)	23944	NM_001326	1479	Hs.44402	NM_001326	ENSG00000176102	CSTF3	CSTF-77	cleavage stimulation factor subunit 3	protein-coding
55.6-4	chr5	96647119	96647576	+	0.266667	NA	Intergenic	Intergenic	-14690	NM_001042442	831	Hs.436186	NM_001750	ENSG00000153113	CAST	BS-17|PLACK	calpastatin	protein-coding
34.4334-5	chr7	81362605	81362883	+	0.266667	NA	Intergenic	CR1_Mam|LINE|CR1	199075	NR_136264	105369146	Hs.730390	NR_136264		LOC105369146	-	uncharacterized LOC105369146	ncRNA
50.4667-4	chr5	119073542	119073784	+	0.266667	NA	intron (NM_001290321, intron 1 of 43)	intron (NM_001290321, intron 1 of 43)	2576	NM_001290322	1657	Hs.181042	NM_005509	ENSG00000172869	DMXL1	-	Dmx like 1	protein-coding
65.8-4	chr4	104846622	104846946	+	0.266667	NA	Intergenic	Intergenic	-299091	NM_017628	54790	Hs.367639	NM_017628	ENSG00000168769	TET2	KIAA1546|MDS	tet methylcytosine dioxygenase 2	protein-coding
32.8-3	chr11	70432787	70432958	+	0.266667	NA	intron (NM_005231, intron 15 of 17)	intron (NM_005231, intron 15 of 17)	34343	NM_001184740	2017	Hs.596164	NM_005231	ENSG00000085733	CTTN	EMS1	cortactin	protein-coding
30.4334-2	chr11	13520978	13521215	+	0.266667	NA	Intergenic	L1MC5a|LINE|L1	-24921	NM_001316352	5741	Hs.37045	NM_000315	ENSG00000152266	PTH	PTH1	parathyroid hormone	protein-coding
44.4334	chr2	58281824	58282069	+	0.266667	NA	intron (NR_147010, intron 1 of 2)	intron (NR_147010, intron 1 of 2)	6069	NR_147010	105374744	Hs.447687	NR_147010	ENSG00000225226	LINC01795	-	long intergenic non-protein coding RNA 1795	ncRNA
85.9334	chr7	118150372	118150820	+	0.266667	NA	Intergenic	L2a|LINE|L2	-33568	NM_016200	51691	Hs.655046	NM_016200	ENSG00000128534	LSM8	NAA38	LSM8 homolog, U6 small nuclear RNA associated	protein-coding
40.1333-4	chr3	103901442	103901751	+	0.266667	NA	Intergenic	AluSz|SINE|Alu	-377480	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
67.1999	chr7	51143971	51144433	+	0.266667	NA	intron (NM_015198, intron 5 of 12)	intron (NM_015198, intron 5 of 12)	172607	NM_001287438	23242	Hs.99141	NM_015198	ENSG00000106078	COBL	-	cordon-bleu WH2 repeat protein	protein-coding
55.4667	chr14	47296244	47296511	+	0.266667	NA	intron (NM_001113498, intron 2 of 16)	intron (NM_001113498, intron 2 of 16)	46869	NM_182830	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
57.6333	chr1	68481670	68482064	+	0.266667	NA	intron (NM_017779, intron 7 of 10)	intron (NM_017779, intron 7 of 10)	-14809	NR_110671	101927220	Hs.382856	NR_110671	ENSG00000234264	DEPDC1-AS1	-	DEPDC1 antisense RNA 1	ncRNA
122.367	chr11	43475951	43476588	+	0.266667	NA	intron (NM_018259, intron 21 of 23)	L1MC5|LINE|L1	-83387	NR_031577	100313777		NR_031577	ENSG00000211568	MIR670	hsa-mir-670	microRNA 670	ncRNA
55.2667	chr15	64110007	64110362	+	0.266667	NA	intron (NM_003099, intron 1 of 14)	L1ME4a|LINE|L1	14202	NM_003099	6642	Hs.188634	NM_003099	ENSG00000028528	SNX1	HsT17379|VPS5	sorting nexin 1	protein-coding
76.4668	chr7	82310654	82310975	+	0.266667	NA	intron (NM_000722, intron 3 of 38)	LTR49-int|LTR|ERV1	132963	NM_001302890	781	Hs.282151	NM_000722	ENSG00000153956	CACNA2D1	CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3	calcium voltage-gated channel auxiliary subunit alpha2delta 1	protein-coding
37.2-4	chr18	12806034	12806236	+	0.266667	NA	intron (NM_080423, intron 7 of 8)	L1MA6|LINE|L1	34827	NM_001308287	5771	Hs.654527	NM_002828	ENSG00000175354	PTPN2	PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP	protein tyrosine phosphatase non-receptor type 2	protein-coding
40.4-5	chr5	37939572	37939850	+	0.266667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-8780	NR_134262	105374729	Hs.150642	NR_134262	ENSG00000251518	LINC02110	-	long intergenic non-protein coding RNA 2110	ncRNA
66.3667	chr8	86049833	86050585	+	0.266667	NA	intron (NM_033126, intron 2 of 2)	LTR56|LTR|ERV1	19459	NM_033126	85481	Hs.566854	NM_033126	ENSG00000147613	PSKH2	-	protein serine kinase H2	protein-coding
69.6001	chr3	149260696	149261106	+	0.266667	NA	Intergenic	AluJr4|SINE|Alu	-39072	NR_046371	1356	Hs.558314	NM_000096	ENSG00000047457	CP	CP-2	ceruloplasmin	protein-coding
50.8667-2	chr8	117298607	117298928	+	0.266667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	163772	NM_173851	169026	Hs.532270	NM_173851	ENSG00000164756	SLC30A8	ZNT8|ZnT-8	solute carrier family 30 member 8	protein-coding
42.4-4	chr2	220549929	220550207	+	0.266667	NA	Intergenic	Intergenic	-643503	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA
34.8334-3	chrX	97982628	97982818	+	0.266667	NA	Intergenic	MER20B|DNA|hAT-Charlie	-418188	NR_125391	10824	Hs.654372	NR_125391	ENSG00000236256	DIAPH2-AS1	EPAG	DIAPH2 antisense RNA 1	ncRNA
83.5668	chr3	194921655	194922290	+	0.266667	NA	Intergenic	MER41A|LTR|ERV1	-153263	NR_146990	105374293		NR_146990	ENSG00000230401	LINC01972	-	long intergenic non-protein coding RNA 1972	ncRNA
52.9-3	chr4	101499132	101499557	+	0.266667	NA	Intergenic	L1MC1|LINE|L1	151567	NR_033874	90024	Hs.534513	NR_033874	ENSG00000254531	FLJ20021	-	uncharacterized LOC90024	ncRNA
79.9998	chr13	86014886	86015457	+	0.266667	NA	Intergenic	L1MEc|LINE|L1	-215752	NM_032229	84189	Hs.525105	NM_032229	ENSG00000184564	SLITRK6	DFNMYP	SLIT and NTRK like family member 6	protein-coding
98.4001	chr4	33228920	33229498	+	0.266667	NA	Intergenic	ERV24B_Prim-int|LTR|ERV1	810684	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
88.9334	chr3	148230398	148230800	+	0.266667	NA	Intergenic	Intergenic	-50292	NR_146712	105374149	Hs.274837	NR_146712		LINC02046	-	long intergenic non-protein coding RNA 2046	ncRNA
29.1667-4	chr15	100321279	100321443	+	0.266667	NA	intron (NM_139057, intron 3 of 21)	L1MEd|LINE|L1	20614	NM_139057	170691	Hs.513200	NM_139057	ENSG00000140470	ADAMTS17	WMS4	ADAM metallopeptidase with thrombospondin type 1 motif 17	protein-coding
25.0667-10	chr7	105946128	105946256	+	0.266667	NA	Intergenic	Intergenic	-17072	NM_152750	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding
68.2001	chr18	10489400	10489898	+	0.266667	NA	3' UTR (NM_153000, exon 5 of 5)	3' UTR (NM_153000, exon 5 of 5)	35014	NM_153000	147495	Hs.293274	NM_153000	ENSG00000154856	APCDD1	B7323|DRAPC1|FP7019|HHS|HTS|HYPT1	APC down-regulated 1	protein-coding
67.7001	chr1	65903772	65904317	+	0.266667	NA	intron (NM_002600, intron 1 of 16)	LTR84b|LTR|ERVL	-9201	NM_001297441	5142	Hs.198072	NM_002600	ENSG00000184588	PDE4B	DPDE4|PDEIVB	phosphodiesterase 4B	protein-coding
102.667	chr7	111259172	111259791	+	0.266667	NA	intron (NM_032549, intron 3 of 5)	AluJr4|SINE|Alu	168354	NM_018334	54674	Hs.3781	NM_018334	ENSG00000173114	LRRN3	FIGLER5|NLRR-3|NLRR3	leucine rich repeat neuronal 3	protein-coding
28.5667-13	chr7	34737729	34737928	+	0.266667	NA	intron (NR_015356, intron 2 of 4)	L2a|LINE|L2	20444	NR_033664	404744	Hs.487951	NM_207283	ENSG00000197085	NPSR1-AS1	AAA1	NPSR1 antisense RNA 1	ncRNA
38.5667-3	chr20	46843963	46844192	+	0.266667	NA	Intergenic	MLT1O|LTR|ERVL-MaLR	-50547	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding
62.2333	chr4	66393554	66394116	+	0.266667	NA	Intergenic	MSTB|LTR|ERVL-MaLR	117011	NR_031673	100302177		NR_031673	ENSG00000221563	MIR1269A	MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a	microRNA 1269a	ncRNA
31.2334	chr21	25854318	25854461	+	0.266667	NA	Intergenic	Intergenic	-118735	NM_001003697	522	Hs.246310	NM_001685	ENSG00000154723	ATP5PF	ATP5|ATP5A|ATP5J|ATPM|CF6|F6	ATP synthase peripheral stalk subunit F6	protein-coding
55.2-5	chr7	91408121	91408372	+	0.266667	NA	Intergenic	Intergenic	143813	NM_003505	8321	Hs.94234	NM_003505	ENSG00000157240	FZD1	-	frizzled class receptor 1	protein-coding
31.6-2	chr17	66385144	66385349	+	0.266667	NA	intron (NM_002737, intron 2 of 16)	intron (NM_002737, intron 2 of 16)	31608	NR_110822	101928001	Hs.650730	NR_110822		PRKCA-AS1	-	PRKCA antisense RNA 1	ncRNA
47.8334-2	chr5	112601434	112601648	+	0.266667	NA	Intergenic	Charlie5|DNA|hAT-Charlie	-26895	NR_104672	102467214	Hs.124613	NR_104672		LINC02200	-	long intergenic non-protein coding RNA 2200	ncRNA
47.5334-2	chr11	85516559	85517022	+	0.266667	NA	intron (NM_001142699, intron 3 of 27)	L1MA3|LINE|L1	110480	NM_001142699	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
59.4666-2	chr2	46159250	46159592	+	0.266667	NA	intron (NM_005400, intron 13 of 14)	MIR|SINE|MIR	-137986	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding
49.1334	chr1	113234759	113235028	+	0.266667	NA	Intergenic	Intergenic	-28640	NR_038846	643441	Hs.124895	NR_038846		LOC643441	-	uncharacterized LOC643441	ncRNA
51.9334	chr11	103706664	103706938	+	0.266667	NA	Intergenic	Intergenic	-143105	NR_039842	100616457		NR_039842	ENSG00000264200	MIR4693	-	microRNA 4693	ncRNA
57.9334-2	chr6	125658751	125658990	+	0.266667	NA	Intergenic	LTR88b|LTR|Gypsy?	-15483	NR_038906	643623	Hs.520367	NR_038906	ENSG00000224506	LINC02523	-	long intergenic non-protein coding RNA 2523	ncRNA
41.9334-6	chr4	163440581	163440765	+	0.266667	NA	Intergenic	AluJb|SINE|Alu	33081	NM_032136	84076	Hs.303923	NM_032136	ENSG00000151005	TKTL2	-	transketolase like 2	protein-coding
34.5-9	chr8	84333413	84333583	+	0.266667	NA	intron (NM_001354320, intron 2 of 9)	intron (NM_001354320, intron 2 of 9)	-81986	NM_001354308	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
43.9334-2	chr8	92550537	92550713	+	0.266667	NA	Intergenic	L2c|LINE|L2	104869	NR_125827	102724710	Hs.125714	NR_125827	ENSG00000253634	LOC102724710	-	uncharacterized LOC102724710	ncRNA
75.3334	chr11	15876939	15877522	+	0.266667	NA	Intergenic	Intergenic	92391	NR_106721	102464826		NR_106721	ENSG00000284094	MIR6073	hsa-mir-6073	microRNA 6073	ncRNA
40.2-6	chr2	129524445	129524663	+	0.266667	NA	Intergenic	L1PA15|LINE|L1	-250663	NR_122040	151121	Hs.531687	NM_001033657	ENSG00000204460	LINC01854	-	long intergenic non-protein coding RNA 1854	ncRNA
65.2	chr1	40530878	40531195	+	0.266667	NA	promoter-TSS (NM_152373)	promoter-TSS (NM_152373)	-601	NM_152373	127396	Hs.524767	NM_152373	ENSG00000117010	ZNF684	-	zinc finger protein 684	protein-coding
37.8-9	chr6	44969606	44969848	+	0.266667	NA	intron (NM_181356, intron 8 of 12)	intron (NM_181356, intron 8 of 12)	228043	NR_030313	693171		NR_030313	ENSG00000207769	MIR586	MIRN586|hsa-mir-586	microRNA 586	ncRNA
71.8667	chr7	14117116	14117486	+	0.266667	NA	Intergenic	L3|LINE|CR1	-125876	NM_001163148	2115	Hs.22634	NM_004956	ENSG00000006468	ETV1	ER81	ETS variant 1	protein-coding
51.6	chr3	26254013	26254492	+	0.266667	NA	Intergenic	Intergenic	-368554	NM_052953	116135	Hs.517868	NM_052953	ENSG00000179796	LRRC3B	LRP15	leucine rich repeat containing 3B	protein-coding
43.8667-3	chr20	17387505	17387861	+	0.266667	NA	intron (NM_002594, intron 5 of 11)	MLT1F|LTR|ERVL-MaLR	143696	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding
53.9334	chr5	62768707	62769013	+	0.266667	NA	Intergenic	Intergenic	190041	NM_181506	100130733	Hs.721348	NM_181506	ENSG00000186105	LRRC70	SLRN	leucine rich repeat containing 70	protein-coding
40.2334-3	chr2	228883698	228883909	+	0.266667	NA	Intergenic	L1M4|LINE|L1	-272408	NR_151716	101928765	Hs.334040	NR_151716	ENSG00000232023	LINC01807	-	long intergenic non-protein coding RNA 1807	ncRNA
43.6334	chr12	80815216	80815488	+	0.266667	NA	intron (NM_004664, intron 4 of 5)	intron (NM_004664, intron 4 of 5)	17277	NR_030348	693202		NR_030348	ENSG00000207763	MIR617	MIRN617|hsa-mir-617	microRNA 617	ncRNA
80.1334	chr6	133436336	133436694	+	0.266667	NA	intron (NM_172103, intron 3 of 18)	L2a|LINE|L2	195016	NM_001301013	2070	Hs.596680	NM_004100	ENSG00000112319	EYA4	CMD1J|DFNA10	EYA transcriptional coactivator and phosphatase 4	protein-coding
57.9333	chr17	58940482	58940884	+	0.266667	NA	intron (NM_014906, intron 1 of 6)	intron (NM_014906, intron 1 of 6)	166197	NM_001005207	4591	Hs.579079	NM_015294	ENSG00000108395	TRIM37	MUL|POB1|TEF3	tripartite motif containing 37	protein-coding
57.6001	chr2	198711025	198711385	+	0.266667	NA	Intergenic	Intergenic	-336108	NR_110267	101927619	Hs.632942	NR_110267		LINC01923	-	long intergenic non-protein coding RNA 1923	ncRNA
51.0666-4	chr7	78054404	78054697	+	0.266667	NA	intron (NM_001301128, intron 20 of 20)	intron (NM_001301128, intron 20 of 20)	214420	NM_001127359	57157	Hs.203965	NM_020432	ENSG00000006576	PHTF2	-	putative homeodomain transcription factor 2	protein-coding
55.4666-3	chr16	53223480	53223795	+	0.266667	NA	intron (NM_001352157, intron 3 of 37)	intron (NM_001352157, intron 3 of 37)	15186	NM_001352158	80205	Hs.59159	NM_015287	ENSG00000177200	CHD9	AD013|CHD-9|CReMM|KISH2|PRIC320	chromodomain helicase DNA binding protein 9	protein-coding
56.7	chr8	87856413	87856787	+	0.266667	NA	Intergenic	Intergenic	17415	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
82.8334	chr11	10292740	10293271	+	0.266667	NA	intron (NM_030962, intron 1 of 39)	intron (NM_030962, intron 1 of 39)	1202	NM_030962	81846	Hs.577252	NM_030962	ENSG00000133812	SBF2	CMT4B2|DENND7B|MTMR13	SET binding factor 2	protein-coding
32.1334	chr14	48499903	48500081	+	0.266667	NA	Intergenic	Intergenic	-704978	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
32.8334-2	chr13	59977068	59977207	+	0.266667	NA	intron (NM_001258369, intron 14 of 26)	L2b|LINE|L2	-35581	NR_109838	100874195	Hs.664101	NR_046539	ENSG00000227528	DIAPH3-AS1	-	DIAPH3 antisense RNA 1	ncRNA
51.7667-2	chr18	50276235	50276476	+	0.266667	NA	intron (NM_001204137, intron 6 of 16)	intron (NM_001204137, intron 6 of 16)	5168	NM_001204142	4152	Hs.405610	NM_002384	ENSG00000141644	MBD1	CXXC3|PCM1|RFT	methyl-CpG binding domain protein 1	protein-coding
66.3999	chr21	20525752	20526143	+	0.266667	NA	Intergenic	Intergenic	-267262	NR_151724	111216285	Hs.561034	NR_151724		LINC02573	-	long intergenic non-protein coding RNA 2573	ncRNA
28.8334	chr5	38957383	38957626	+	0.266667	NA	intron (NM_001285439, intron 25 of 38)	intron (NM_001285439, intron 25 of 38)	111492	NM_001323506	9180	Hs.120658	NM_003999	ENSG00000145623	OSMR	IL-31R-beta|IL-31RB|OSMRB|PLCA1	oncostatin M receptor	protein-coding
73.7334	chr3	164756244	164756632	+	0.266667	NA	intron (NR_126405, intron 1 of 3)	intron (NR_126405, intron 1 of 3)	75042	NR_126405	104355289	Hs.574909	NR_126405	ENSG00000241767	LINC01324	-	long intergenic non-protein coding RNA 1324	ncRNA
22.8333-2	chr1	107829831	107829925	+	0.266667	NA	intron (NM_006113, intron 2 of 26)	intron (NM_006113, intron 2 of 26)	-67345	NR_107006	102465839		NR_107006	ENSG00000275455	MIR7852	hsa-mir-7852	microRNA 7852	ncRNA
47.8334	chr10	115782005	115782396	+	0.266667	NA	intron (NM_207303, intron 27 of 28)	intron (NM_207303, intron 27 of 28)	412589	NR_145811	109623470		NR_145811		SNORD158	-	small nucleolar RNA, C/D box 158	snoRNA
41.5-4	chr18	1010749	1011056	+	0.266667	NA	Intergenic	Intergenic	-82909	NR_146724	388456	Hs.407666	NR_146724	ENSG00000259837	LINC01904	-	long intergenic non-protein coding RNA 1904	ncRNA
73.2668-2	chr8	106957316	106957616	+	0.266667	NA	Intergenic	L1MB7|LINE|L1	-187222	NM_139166	137735	Hs.374668	NM_139166	ENSG00000174429	ABRA	STARS	actin binding Rho activating protein	protein-coding
41.9001	chr3	143881795	143881988	+	0.266667	NA	Intergenic	Intergenic	-33423	NM_173653	285195	Hs.302257	NM_173653	ENSG00000181804	SLC9A9	AUTS16|NHE9	solute carrier family 9 member A9	protein-coding
36.1334	chr13	76775627	76775773	+	0.266667	NA	Intergenic	Intergenic	110705	NM_138444	115207	Hs.644125	NM_138444	ENSG00000178695	KCTD12	C13orf2|PFET1|PFETIN	potassium channel tetramerization domain containing 12	protein-coding
25.5667-7	chr17	81405562	81405671	+	0.266667	NA	intron (NM_001291324, intron 1 of 27)	intron (NM_001291324, intron 1 of 27)	-4838	NR_039894	100616294		NR_039894	ENSG00000266392	MIR4740	-	microRNA 4740	ncRNA
50.3001	chr15	76709907	76710162	+	0.266667	NA	intron (NR_148227, intron 17 of 32)	L1ME2|LINE|L1	123387	NR_037464	100500855		NR_037464	ENSG00000266449	MIR3713	-	microRNA 3713	ncRNA
34.2666-2	chr3	94928228	94928479	+	0.266667	NA	Intergenic	AluSz|SINE|Alu	-9910	NR_015400	255025	Hs.130994	NR_015400	ENSG00000239589	LINC00879	-	long intergenic non-protein coding RNA 879	ncRNA
39.7-6	chr20	53743489	53744007	+	0.266667	NA	Intergenic	Intergenic	131961	NR_002189	391257	Hs.449977	NR_002189		SUMO1P1	PIC1L|UBL2|UBL6	SUMO1 pseudogene 1	pseudo
56.4999-2	chr7	70934686	70934953	+	0.266667	NA	Intergenic	Intergenic	-197325	NM_022479	64409	Hs.488591	NM_022479	ENSG00000185274	GALNT17	GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17	polypeptide N-acetylgalactosaminyltransferase 17	protein-coding
54.8334-3	chr8	111382138	111382512	+	0.266667	NA	intron (NR_146282, intron 1 of 3)	L1PB3|LINE|L1	5686	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
71.0001	chr17	40508067	40508392	+	0.266667	NA	Intergenic	Charlie7|DNA|hAT-Charlie	-6606	NM_032865	84951	Hs.438292	NM_032865	ENSG00000131746	TNS4	CTEN|PP14434	tensin 4	protein-coding
39.9333-7	chr9	89031478	89031827	+	0.266667	NA	intron (NM_016848, intron 11 of 11)	L1MB7|LINE|L1	40184	NM_005226	1903	Hs.585118	NM_005226	ENSG00000213694	S1PR3	EDG-3|EDG3|LPB3|S1P3	sphingosine-1-phosphate receptor 3	protein-coding
44	chr12	1852657	1853165	+	0.266667	NA	intron (NM_172364, intron 23 of 37).2	MIR|SINE|MIR	32346	NM_001039029	654429	Hs.585579	NM_001039029	ENSG00000166159	LRTM2	-	leucine rich repeats and transmembrane domains 2	protein-coding
51.4667	chr17	28028494	28028751	+	0.266667	NA	Intergenic	AluSc8|SINE|Alu	-14055	NM_016231	51701	Hs.208759	NM_016231	ENSG00000087095	NLK	-	nemo like kinase	protein-coding
76.8334	chr2	215637137	215637604	+	0.266667	NA	intron (NR_037195, intron 5 of 9)	MLT2B1|LTR|ERVL	-80673	NR_132383	105373869	Hs.152812	NR_132383		LINC01614	LCAL4	long intergenic non-protein coding RNA 1614	ncRNA
36.9667-4	chr5	26305646	26305950	+	0.266667	NA	Intergenic	Intergenic	732788	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
69.7001-2	chr3	161985097	161985373	+	0.266667	NA	Intergenic	Intergenic	488427	NM_001080440	131149	Hs.585021	NM_001080440	ENSG00000182447	OTOL1	C1QTNF15|C1QTNF16	otolin 1	protein-coding
33.9334	chr10	115576373	115576647	+	0.266667	NA	intron (NM_207303, intron 26 of 28)	L1MA9|LINE|L1	483145	NM_001276282	26033	Hs.501127	NM_207303	ENSG00000107518	ATRNL1	ALP|bA338L11.1|bA454H24.1	attractin like 1	protein-coding
41.4334	chr17	39829152	39829319	+	0.266667	NA	intron (NM_001257409, intron 2 of 5)	intron (NM_001257409, intron 2 of 5)	34953	NM_001284514	22806	Hs.371680	NM_012481	ENSG00000161405	IKZF3	AIO|AIOLOS|ZNFN1A3	IKAROS family zinc finger 3	protein-coding
77	chr6	27233684	27234276	+	0.266667	NA	Intergenic	Intergenic	-13721	NM_005865	10279	Hs.274407	NM_005865	ENSG00000112812	PRSS16	TSSP	serine protease 16	protein-coding
107.067	chr2	181332187	181332791	+	0.266667	NA	intron (NR_130784, intron 3 of 4)	intron (NR_130784, intron 3 of 4)	-26837	NR_039637	100616213		NR_039637	ENSG00000266705	MIR4437	mir-4437	microRNA 4437	ncRNA
78.9	chr5	27758461	27758824	+	0.266667	NA	Intergenic	Intergenic	286350	NR_038848	643401	Hs.533212	NR_038848	ENSG00000250337	PURPL	LINC01021	p53 upregulated regulator of p53 levels	ncRNA
48.2-6	chr8	120168461	120168737	+	0.266667	NA	intron (NM_021110, intron 5 of 47)	MIR|SINE|MIR	43497	NM_021110	7373	Hs.409662	NM_021110	ENSG00000187955	COL14A1	UND	collagen type XIV alpha 1 chain	protein-coding
32.1-7	chr2	163705231	163705462	+	0.266667	NA	intron (NM_001321825, intron 1 of 1)	intron (NM_001321825, intron 1 of 1)	30662	NM_001321825	55137	Hs.593650	NM_018086	ENSG00000182263	FIGN	-	fidgetin, microtubule severing factor	protein-coding
20.2-12	chr5	163647111	163647254	+	0.266667	NA	Intergenic	AluSx|SINE|Alu	141563	NM_013283	27430	Hs.54642	NM_013283	ENSG00000038274	MAT2B	MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR	methionine adenosyltransferase 2B	protein-coding
37.9667-5	chr2	145813178	145813335	+	0.266667	NA	Intergenic	Intergenic	-773801	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
30.0333-5	chr5	89256961	89257229	+	0.266667	NA	intron (NR_136219, intron 7 of 9)	intron (NR_136219, intron 7 of 9)	-352990	NM_001131005	4208	Hs.649965	NM_002397	ENSG00000081189	MEF2C	C5DELq14.3|DEL5q14.3	myocyte enhancer factor 2C	protein-coding
74.1334-2	chr7	71829334	71829680	+	0.266667	NA	intron (NM_001363460, intron 4 of 5)	intron (NM_001363460, intron 4 of 5)	507884	NM_001017440	83698	Hs.592750	NM_031468	ENSG00000183166	CALN1	CABP8	calneuron 1	protein-coding
40.6667-9	chr9	87280004	87280268	+	0.266667	NA	Intergenic	Intergenic	131492	NR_161226	401535	Hs.657740	NR_161226		C9orf170	-	chromosome 9 open reading frame 170	ncRNA
73.6334	chr11	29305159	29305574	+	0.266667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-289047	NR_149107	105376606	Hs.577275	NR_149106	ENSG00000255117	LINC02546	-	long intergenic non-protein coding RNA 2546	ncRNA
64.2666	chr5	26521585	26521930	+	0.266667	NA	Intergenic	L1ME3A|LINE|L1	516829	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
32.3334	chr13	34506400	34506584	+	0.266667	NA	intron (NR_047036, intron 2 of 2)	MIRb|SINE|MIR	134193	NR_047036	100874179	Hs.569253	NR_047036	ENSG00000225179	LINC00457	-	long intergenic non-protein coding RNA 457	ncRNA
28.4-12	chr5	33672961	33673088	+	0.266667	NA	intron (NM_001324512, intron 5 of 21)	intron (NM_001324512, intron 5 of 21)	218966	NM_001324511	81792	Hs.12680	NM_030955	ENSG00000151388	ADAMTS12	PRO4389	ADAM metallopeptidase with thrombospondin type 1 motif 12	protein-coding
51.0666	chr22	48346758	48347114	+	0.266667	NA	Intergenic	Intergenic	72572	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA
42.1-3	chr2	228613007	228613264	+	0.233333	NA	Intergenic	MIR|SINE|MIR	-1740	NR_151716	101928765	Hs.334040	NR_151716	ENSG00000232023	LINC01807	-	long intergenic non-protein coding RNA 1807	ncRNA
40.8-4	chr3	3478274	3478516	+	0.233333	NA	Intergenic	Intergenic	-298678	NM_016302	51185	Hs.18925	NM_016302	ENSG00000113851	CRBN	MRT2|MRT2A	cereblon	protein-coding
39.9333-6	chr5	14062505	14062773	+	0.233333	NA	Intergenic	L1ME1|LINE|L1	-80703	NR_134469	7204	Hs.130031	NM_007118	ENSG00000038382	TRIO	ARHGEF23|MEBAS|MRD44|tgat	trio Rho guanine nucleotide exchange factor	protein-coding
39.2666-5	chr4	8908413	8908581	+	0.233333	NA	Intergenic	Intergenic	-36658	NM_001306142	3166	Hs.104134	NM_018942	ENSG00000215612	HMX1	H6|NKX5-3	H6 family homeobox 1	protein-coding
62.1666-2	chr20	50947438	50947845	+	0.233333	NA	intron (NM_003859, intron 3 of 8)	intron (NM_003859, intron 3 of 8)	10923	NM_001317036	8813	Hs.654951	NM_003859	ENSG00000000419	DPM1	CDGIE|MPDS	dolichyl-phosphate mannosyltransferase subunit 1, catalytic	protein-coding
28.6-3	chr11	77284594	77284792	+	0.233333	NA	intron (NM_182833, intron 3 of 16)	intron (NM_182833, intron 3 of 16)	16973	NM_182833	220032	Hs.249795	NM_182833	ENSG00000178795	GDPD4	GDE6	glycerophosphodiester phosphodiesterase domain containing 4	protein-coding
46.5666	chr12	118924185	118924535	+	0.233333	NA	Intergenic	Intergenic	-57181	NM_194286	84530	Hs.744964	NM_194286	ENSG00000139767	SRRM4	KIAA1853|MU-MB-2.76|nSR100	serine/arginine repetitive matrix 4	protein-coding
78.9665	chr7	77802196	77802626	+	0.233333	NA	intron (NM_001366088, intron 1 of 11)	intron (NM_001366088, intron 1 of 11)	3440	NM_001366088	57157	Hs.203965	NM_020432	ENSG00000006576	PHTF2	-	putative homeodomain transcription factor 2	protein-coding
46.1333-5	chr2	29770547	29770873	+	0.233333	NA	intron (NM_004304, intron 1 of 28)	HAL1|LINE|L1	150876	NM_004304	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	ALK receptor tyrosine kinase	protein-coding
52.4333	chrX	105791336	105791560	+	0.233333	NA	Intergenic	Intergenic	-31091	NM_198465	203447	Hs.209527	NM_198465	ENSG00000123572	NRK	NESK	Nik related kinase	protein-coding
40.5333	chr1	33348443	33348628	+	0.233333	NA	intron (NM_198040, intron 8 of 13)	intron (NM_198040, intron 8 of 13)	1364	NM_004427	1912	Hs.524271	NM_004427	ENSG00000134686	PHC2	EDR2|HPH2|PH2	polyhomeotic homolog 2	protein-coding
58.9666	chr1	81820349	81820679	+	0.233333	NA	intron (NM_001366002, intron 2 of 20)	intron (NM_001366002, intron 2 of 20)	18061	NM_001366007	23266	Hs.24212	NM_012302	ENSG00000117114	ADGRL2	CIRL2|CL2|LEC1|LPHH1|LPHN2	adhesion G protein-coupled receptor L2	protein-coding
42.2999-3	chr4	140321099	140321377	+	0.233333	NA	intron (NR_033939, intron 2 of 4)	L1ME1|LINE|L1	-22205	NM_001153446	60592	Hs.480815	NM_032547	ENSG00000153130	SCOC	HRIHFB2072|SCOCO|UNC-69	short coiled-coil protein	protein-coding
22.8333-7	chr6	113281364	113281493	+	0.233333	NA	Intergenic	Intergenic	152019	NR_149098	105377957	Hs.25088	NR_149098	ENSG00000232316	LINC02518	-	long intergenic non-protein coding RNA 2518	ncRNA
33.7333-6	chr4	23945084	23945471	+	0.233333	NA	intron (NM_001330752, intron 2 of 13)	intron (NM_001330752, intron 2 of 13)	-55230	NM_001354828	10891	Hs.527078	NM_013261	ENSG00000109819	PPARGC1A	LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1	PPARG coactivator 1 alpha	protein-coding
33.4333-9	chr4	165288928	165289120	+	0.233333	NA	intron (NM_001161522, intron 4 of 13)	intron (NM_001161522, intron 4 of 13)	-9001	NR_026575	2713	Hs.654557	NR_026575	ENSG00000229894	GK3P	GKP3|GKTB	glycerol kinase 3 pseudogene	pseudo
56.3999	chr14	85500225	85500553	+	0.233333	NA	Intergenic	L2|LINE|L2	-29636	NR_144386	23768	Hs.533710	NM_013231	ENSG00000185070	FLRT2	-	fibronectin leucine rich transmembrane protein 2	protein-coding
33.3-5	chr5	21393415	21393851	+	0.233333	NA	Intergenic	Intergenic	-65847	NR_027027	728411	Hs.88181	NM_207331	ENSG00000183666	GUSBP1	-	GUSB pseudogene 1	pseudo
60.9001	chr2	158959435	158959803	+	0.233333	NA	Intergenic	Intergenic	-9015	NM_001350064	85461	Hs.61590	NM_033394	ENSG00000115183	TANC1	ROLSB|TANC	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
76.8332	chr7	10889128	10889542	+	0.233333	NA	Intergenic	Intergenic	50818	NM_002489	4697	Hs.50098	NM_002489	ENSG00000189043	NDUFA4	CI-9k|CI-MLRQ|COXFA4|MLRQ	NDUFA4 mitochondrial complex associated	protein-coding
31.4-13	chr3	83071296	83071614	+	0.233333	NA	Intergenic	L1PA16|LINE|L1	1085313	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
58.1999	chr16	58942717	58943054	+	0.233333	NA	Intergenic	L1MA8|LINE|L1	-208569	NM_001286220	2806	Hs.599470	NM_002080	ENSG00000125166	GOT2	KAT4|KATIV|KYAT4|mitAAT	glutamic-oxaloacetic transaminase 2	protein-coding
35.9666-2	chr2	100017858	100018264	+	0.233333	NA	intron (NM_001025108, intron 2 of 23)	intron (NM_001025108, intron 2 of 23)	87522	NM_001025108	3899	Hs.444414	NM_002285	ENSG00000144218	AFF3	LAF4|MLLT2-like	AF4/FMR2 family member 3	protein-coding
26.3333-9	chr7	8105467	8105661	+	0.233333	NA	Intergenic	Intergenic	136768	NM_138426	113263	Hs.131673	NM_138426	ENSG00000106415	GLCCI1	FAM117C|GCTR|GIG18|TSSN1	glucocorticoid induced 1	protein-coding
21.8333	chr1	229215263	229215416	+	0.233333	NA	Intergenic	L1ME4b|LINE|L1	-40538	NR_039659	100616234		NR_039659	ENSG00000283468	MIR4454	-	microRNA 4454	ncRNA
42.6	chr1	102825786	102826074	+	0.233333	NA	Intergenic	L1MA4|LINE|L1	282566	NM_080629	1301	Hs.523446	NM_001854	ENSG00000060718	COL11A1	CO11A1|COLL6|STL2	collagen type XI alpha 1 chain	protein-coding
31.5667-9	chrX	102699593	102699745	+	0.233333	NA	intron (NR_146585, intron 2 of 6)	MLT1I|LTR|ERVL-MaLR	-12381	NR_146587	100528062	Hs.522729	NM_001199818	ENSG00000286237	ARMCX5-GPRASP2	ARMCX5-GPRASP2-BHLHB9-LINC00630|bHLHb9|p60TRP	ARMCX5-GPRASP2 readthrough	protein-coding
24.7	chr1	157811583	157811702	+	0.233333	NA	intron (NM_001159397, intron 1 of 9)	L1MA6|LINE|L1	8478	NM_001159397	115350	Hs.656112	NM_052938	ENSG00000163534	FCRL1	CD307a|FCRH1|IFGP1|IRTA5	Fc receptor like 1	protein-coding
32.1667-11	chr8	126311683	126311890	+	0.233333	NA	Intergenic	MLT2B4|LTR|ERVL	-13709	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA
74.8668	chr14	63428399	63428934	+	0.233333	NA	intron (NR_104104, intron 2 of 12)	intron (NR_104104, intron 2 of 12)	79572	NM_001282181	5529	Hs.334868	NM_006246	ENSG00000154001	PPP2R5E	B56E|B56epsilon	protein phosphatase 2 regulatory subunit B'epsilon	protein-coding
85.2999	chr10	126067323	126067716	+	0.233333	NA	intron (NM_001288974, intron 12 of 18)	intron (NM_001288974, intron 12 of 18)	-94246	NR_102707	101410540	Hs.557889	NR_102707	ENSG00000233409	FANK1-AS1	-	FANK1 antisense RNA 1	ncRNA
21.2666-3	chr20	56329660	56329774	+	0.233333	NA	Intergenic	L2c|LINE|L2	-29257	NM_080821	116151	Hs.143736	NM_080821	ENSG00000124098	FAM210B	5A3|C20orf108|dJ1167H4.1	family with sequence similarity 210 member B	protein-coding
38.3667-2	chr3	63370127	63370347	+	0.233333	NA	intron (NM_001130003, intron 2 of 5)	intron (NM_001130003, intron 2 of 5)	-73075	NM_144642	132204	Hs.648668	NM_144642	ENSG00000163630	SYNPR	SPO	synaptoporin	protein-coding
24.6-17	chrX	124058467	124058625	+	0.233333	NA	intron (NM_006603, intron 14 of 32)	MIRb|SINE|MIR	96840	NM_001042751	10735	Hs.496710	NM_006603	ENSG00000101972	STAG2	NEDXCF|SA-2|SA2|SCC3B|bA517O1.1	stromal antigen 2	protein-coding
61.6-2	chr3	75235429	75235900	+	0.233333	NA	Intergenic	THE1D-int|LTR|ERVL-MaLR	21188	NR_039646	100616394		NR_039646	ENSG00000284252	MIR4444-1	MIR4444|hsa-mir-4444-1|miR-4444-1	microRNA 4444-1	ncRNA
56.9333	chr14	35472536	35472958	+	0.233333	NA	Intergenic	AluJb|SINE|Alu	-61417	NM_032594	84684	Hs.62813	NM_032594	ENSG00000168348	INSM2	IA-6|IA6|mlt1	INSM transcriptional repressor 2	protein-coding
54.6-2	chr5	52200687	52201120	+	0.233333	NA	Intergenic	Intergenic	192872	NR_147166	105378960	Hs.639310	NR_147166	ENSG00000248789	LINC02118	-	long intergenic non-protein coding RNA 2118	ncRNA
27.3333-7	chr22	34914932	34915196	+	0.233333	NA	intron (NR_138042, intron 1 of 4)	intron (NR_138042, intron 1 of 4)	82852	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
33.0667	chr12	89622122	89622418	+	0.233333	NA	intron (NM_001001323, intron 9 of 21)	intron (NM_001001323, intron 9 of 21)	86568	NM_001366532	490	Hs.506276	NM_001682	ENSG00000070961	ATP2B1	PMCA1|PMCA1kb	ATPase plasma membrane Ca2+ transporting 1	protein-coding
25.2333-6	chr15	67318142	67318348	+	0.233333	NA	intron (NM_001322475, intron 3 of 17)	(CTTTTT)n|Simple_repeat|Simple_repeat	-63047	NM_001271885	79719	Hs.254642	NM_024666	ENSG00000103591	AAGAB	KPPP1|PPKP1|PPKP1A|p34	alpha and gamma adaptin binding protein	protein-coding
55.2333-2	chr3	172763922	172764298	+	0.233333	NA	intron (NM_001349095, intron 11 of 25)	intron (NM_001349095, intron 11 of 25)	13108	NM_001349101	1894	Hs.518299	NM_018098	ENSG00000114346	ECT2	ARHGEF31	epithelial cell transforming 2	protein-coding
42.4999-2	chr8	81780212	81780641	+	0.233333	NA	Intergenic	Intergenic	47978	NM_152284	92421	Hs.183861	NM_152284	ENSG00000164695	CHMP4C	SNF7-3|Shax3|VPS32C	charged multivesicular body protein 4C	protein-coding
25.1333-10	chr4	65130196	65130373	+	0.233333	NA	Intergenic	Intergenic	-125784	NR_033976	401134	Hs.165899	NR_033976	ENSG00000250125	LINC02232	-	long intergenic non-protein coding RNA 2232	ncRNA
52.6667	chr12	11991609	11991864	+	0.233333	NA	Intergenic	Intergenic	-58125	NM_001370268	79370	Hs.210343	NM_030766	ENSG00000121380	BCL2L14	BCLG	BCL2 like 14	protein-coding
49.5333-2	chr20	54103005	54103402	+	0.233333	NA	Intergenic	(AATT)n|Simple_repeat|Simple_repeat	-32438	NM_003657	8537	Hs.400556	NM_003657	ENSG00000064787	BCAS1	AIBC1|NABC1	breast carcinoma amplified sequence 1	protein-coding
30.9334	chr13	37915410	37915598	+	0.233333	NA	Intergenic	L1M4b|LINE|L1	-45079	NM_001135955	7223	Hs.262960	NM_003306	ENSG00000133107	TRPC4	HTRP-4|HTRP4|TRP4	transient receptor potential cation channel subfamily C member 4	protein-coding
31.9333-8	chr3	71616163	71616358	+	0.233333	NA	Intergenic	AluYc|SINE|Alu	-32271	NM_001244810	27086	Hs.59368	NM_032682	ENSG00000114861	FOXP1	12CC4|HSPC215|MFH|QRF1|hFKH1B	forkhead box P1	protein-coding
79.4999	chr3	39198814	39199505	+	0.233333	NA	Intergenic	MIR|SINE|MIR	-6564	NM_001198621	165904	Hs.447868	NM_194293	ENSG00000168334	XIRP1	CMYA1|Xin	xin actin binding repeat containing 1	protein-coding
73.9332	chr1	49365056	49365422	+	0.233333	NA	intron (NR_136623, intron 2 of 12)	MIRb|SINE|MIR	106846	NR_046839	100874313	Hs.551277	NR_046839	ENSG00000225623	AGBL4-IT1	-	AGBL4 intronic transcript 1	ncRNA
47.1332	chr20	58062229	58062556	+	0.233333	NA	Intergenic	L1MEc|LINE|L1	58488	NR_147083	105376992	Hs.736662	NR_147083	ENSG00000275852	LINC01742	-	long intergenic non-protein coding RNA 1742	ncRNA
52.9666	chr14	62733656	62734010	+	0.233333	NA	intron (NM_172375, intron 9 of 9)	L2c|LINE|L2	311625	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
43.9-3	chr7	54533187	54533415	+	0.233333	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	-9024	NM_001301009	222008	Hs.335933	NM_182546	ENSG00000170419	VSTM2A	VSTM2	V-set and transmembrane domain containing 2A	protein-coding
35.7333-6	chr2	132872183	132872411	+	0.233333	NA	intron (NM_207481, intron 9 of 17)	intron (NM_207481, intron 9 of 17)	-43260	NR_135572	101928185	Hs.680114	NR_135572	ENSG00000233729	NCKAP5-AS1	-	NCKAP5 antisense RNA 1	ncRNA
30.2	chr1	109352433	109352623	+	0.233333	NA	intron (NM_001205228, intron 5 of 19)	intron (NM_001205228, intron 5 of 19)	40829	NM_001205228	6272	Hs.485195	NM_002959	ENSG00000134243	SORT1	Gp95|LDLCQ6|NT3|NTR3	sortilin 1	protein-coding
39.2666-6	chr4	33323186	33323512	+	0.233333	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	716544	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
54.3666	chr3	114014456	114014799	+	0.233333	NA	intron (NR_148531, intron 6 of 14)	intron (NR_148531, intron 6 of 14)	41899	NM_020817	57577	Hs.477159	NM_020817	ENSG00000163617	CCDC191	KIAA1407	coiled-coil domain containing 191	protein-coding
49.9666	chr1	72119779	72120075	+	0.233333	NA	intron (NM_173808, intron 1 of 6)	intron (NM_173808, intron 1 of 6)	162612	NM_173808	257194	Hs.146542	NM_173808	ENSG00000172260	NEGR1	DMML2433|IGLON4|KILON|Ntra	neuronal growth regulator 1	protein-coding
70.3667	chr15	24765047	24765416	+	0.233333	NA	Intergenic	L1MB2|LINE|L1	-58377	NM_001349458	6638	Hs.564847	NM_003097	ENSG00000128739	SNRPN	HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N	small nuclear ribonucleoprotein polypeptide N	protein-coding
23.9	chr10	113909853	113910038	+	0.233333	NA	3' UTR (NM_198514, exon 11 of 11)	3' UTR (NM_198514, exon 11 of 11)	55284	NM_198514	374354	Hs.369924	NM_198514	ENSG00000196865	NHLRC2	FINCA	NHL repeat containing 2	protein-coding
42.3666	chr3	89057287	89057513	+	0.233333	NA	Intergenic	Intergenic	-50221	NM_005233	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
35.3666	chr1	20653330	20653512	+	0.233333	NA	intron (NM_005216, intron 8 of 10)	intron (NM_005216, intron 8 of 10)	-1228	NR_046507	100861548	Hs.710259	NR_046507	ENSG00000117242	PINK1-AS	NAPINK1|PINK1-AS1|PINK1AS	PINK1 antisense RNA	ncRNA
59.2333-2	chr6	155734949	155735469	+	0.233333	NA	Intergenic	Intergenic	-211588	NR_031606	100302259		NR_031606	ENSG00000221456	MIR1202	MIRN1202|hsa-mir-1202	microRNA 1202	ncRNA
74.5666	chr3	135086541	135086876	+	0.233333	NA	intron (NM_004441, intron 3 of 15)	L2c|LINE|L2	291448	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding
51.6-2	chr5	178540541	178540962	+	0.233333	NA	intron (NM_173465, intron 2 of 28)	AluJb|SINE|Alu	49642	NM_173465	91522	Hs.660026	NM_173465	ENSG00000050767	COL23A1	-	collagen type XXIII alpha 1 chain	protein-coding
35.3333-11	chr5	167134454	167134821	+	0.233333	NA	intron (NM_001122679, intron 1 of 29)	intron (NM_001122679, intron 1 of 29)	33764	NR_134280	101927908		NR_134280	ENSG00000253469	LOC101927908	-	uncharacterized LOC101927908	ncRNA
47.6332	chr3	143944337	143944625	+	0.233333	NA	Intergenic	Intergenic	-27317	NM_001363944	205428	Hs.288954	NM_173552	ENSG00000181744	DIPK2A	C3orf58|DIA1|GoPro49|HASF	divergent protein kinase domain 2A	protein-coding
55.2001	chr11	19084582	19084932	+	0.233333	NA	Intergenic	Intergenic	-24040	NM_054030	117194	Hs.350566	NM_054030	ENSG00000183695	MRGPRX2	MGRG3|MRGX2	MAS related GPR family member X2	protein-coding
33.6667-5	chr2	196474673	196474960	+	0.233333	NA	intron (NM_001348768, intron 1 of 28)	intron (NM_001348768, intron 1 of 28)	-112639	NM_001304840	57520	Hs.633212	NM_020760	ENSG00000138411	HECW2	NDHSAL|NEDL2	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	protein-coding
34.0999	chr1	2279857	2280124	+	0.233333	NA	intron (NM_003036, intron 1 of 6)	intron (NM_003036, intron 1 of 6)	51671	NM_003036	6497	Hs.656507	NM_003036	ENSG00000157933	SKI	SGS|SKV	SKI proto-oncogene	protein-coding
65.4999	chr1	182316923	182317409	+	0.233333	NA	Intergenic	L2|LINE|L2	-3105	NR_104175	400799	Hs.634884	NR_104175	ENSG00000228918	LINC01344	GS1-122H1.2	long intergenic non-protein coding RNA 1344	ncRNA
48.0666-2	chr15	46655894	46656122	+	0.233333	NA	Intergenic	Intergenic	-528081	NM_001198999	80031	Hs.511265	NM_020858	ENSG00000137872	SEMA6D	-	semaphorin 6D	protein-coding
51.4333-2	chr3	124657592	124657988	+	0.233333	NA	exon (NM_001322998, exon 7 of 15)	exon (NM_001322998, exon 7 of 15)	-72576	NR_033437	7372	Hs.2057	NM_000373	ENSG00000114491	UMPS	OPRT	uridine monophosphate synthetase	protein-coding
44.3	chr12	51140636	51140868	+	0.233333	NA	intron (NM_005653, intron 1 of 14)	AluJr4|SINE|Alu	32383	NM_001173453	7024	Hs.48849	NM_005653	ENSG00000135457	TFCP2	LBP1C|LSF|LSF1D|SEF|TFCP2C	transcription factor CP2	protein-coding
17.6666-3	chr16	51689507	51689601	+	0.233333	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-72965	NR_110916	101927364	Hs.133120	NR_110916	ENSG00000260057	LINC01571	-	long intergenic non-protein coding RNA 1571	ncRNA
52.4666-3	chr8	125522384	125522777	+	0.233333	NA	Intergenic	Intergenic	90371	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding
42.8666-4	chr20	58897643	58897990	+	0.233333	NA	intron (NM_001077489, intron 2 of 11)	intron (NM_001077489, intron 2 of 11)	5653	NR_132272	2778	Hs.125898	NM_000516	ENSG00000087460	GNAS	AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|PITA3|POH|SCG6|SgVI	GNAS complex locus	protein-coding
39.9001	chr12	60557939	60558264	+	0.233333	NA	Intergenic	Intergenic	868731	NR_073056	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
43.8-2	chr11	60469255	60469804	+	0.233333	NA	3' UTR (NM_021950, exon 7 of 7)	3' UTR (NM_021950, exon 7 of 7)	13720	NM_152866	931	Hs.712553	NM_021950	ENSG00000156738	MS4A1	B1|Bp35|CD20|CVID5|LEU-16|MS4A2|S7	membrane spanning 4-domains A1	protein-coding
39.5-5	chr7	57907216	57907500	+	0.233333	NA	Intergenic	ALR/Alpha|Satellite|centr	457181	NM_001159279	441234	Hs.533121	NM_001159279	ENSG00000182111	ZNF716	-	zinc finger protein 716	protein-coding
52.6333-4	chr5	121124891	121125162	+	0.233333	NA	Intergenic	L1M5|LINE|L1	-197524	NR_104999	102467226		NR_104999		LOC102467226	-	uncharacterized LOC102467226	ncRNA
61.3333	chr2	240192613	240192928	+	0.233333	NA	Intergenic	L1ME3B|LINE|L1	-52112	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding
57.3666-2	chr15	35424669	35424921	+	0.233333	NA	intron (NM_080650, intron 5 of 8)	L1M6B|LINE|L1	-52431	NR_037507	100500904		NR_037507	ENSG00000265102	MIR3942	-	microRNA 3942	ncRNA
33.1666-4	chr7	82575837	82576049	+	0.233333	NA	Intergenic	MIRc|SINE|MIR	-131987	NM_001366867	781	Hs.282151	NM_000722	ENSG00000153956	CACNA2D1	CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3	calcium voltage-gated channel auxiliary subunit alpha2delta 1	protein-coding
35.3	chr10	104806355	104806656	+	0.233333	NA	intron (NM_014978, intron 1 of 26)	L1ME4c|LINE|L1	-140289	NR_104028	100505890	Hs.348526	NR_104028	ENSG00000226387	SORCS3-AS1	-	SORCS3 antisense RNA 1	ncRNA
26.2333-6	chr13	67085542	67085672	+	0.233333	NA	intron (NM_001318372, intron 2 of 4)	intron (NM_001318372, intron 2 of 4)	94721	NR_046637	100874087	Hs.606903	NR_046637	ENSG00000233840	PCDH9-AS4	-	PCDH9 antisense RNA 4	ncRNA
65.0999	chr3	51319198	51319617	+	0.233333	NA	intron (NM_004947, intron 32 of 52)	(A)n|Simple_repeat|Simple_repeat	-65884	NM_006010	7873	Hs.436446	NM_006010	ENSG00000145050	MANF	ARMET|ARP	mesencephalic astrocyte derived neurotrophic factor	protein-coding
45.9-3	chr2	56243980	56244188	+	0.233333	NA	intron (NM_001348516, intron 2 of 2)	L1MA3|LINE|L1	-58314	NR_125368	100129434	Hs.580330	NR_125368		LOC100129434	-	uncharacterized LOC100129434	ncRNA
31.5	chr1	31811270	31811491	+	0.233333	NA	intron (NM_001281988, intron 1 of 14)	AluSx|SINE|Alu	4671	NM_001281987	90853	Hs.62604	NM_144569	ENSG00000134668	SPOCD1	PPP1R146	SPOC domain containing 1	protein-coding
41.5333-3	chr15	74725046	74725254	+	0.233333	NA	intron (NM_001319217, intron 1 of 6)	intron (NM_001319217, intron 1 of 6)	378	NM_000499	1543	Hs.72912	NM_000499	ENSG00000140465	CYP1A1	AHH|AHRR|CP11|CYP1|CYPIA1|P1-450|P450-C|P450DX	cytochrome P450 family 1 subfamily A member 1	protein-coding
28.7666-2	chr14	53743588	53743922	+	0.233333	NA	Intergenic	(CTCTT)n|Simple_repeat|Simple_repeat	204729	NR_049843	100847076		NR_049843	ENSG00000266431	MIR5580	-	microRNA 5580	ncRNA
32.7-10	chr8	125789771	125790023	+	0.233333	NA	Intergenic	Intergenic	161300	NR_038447	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA
51.4666-3	chr5	166663072	166663463	+	0.233333	NA	Intergenic	Intergenic	263103	NR_108020	102557615		NR_108020	ENSG00000254130	LINC01947	CTB-7E3.1	long intergenic non-protein coding RNA 1947	ncRNA
37.6-5	chr5	23491014	23491267	+	0.233333	NA	Intergenic	L1PA15|LINE|L1	-16469	NM_020227	56979	Hs.283096	NM_020227	ENSG00000164256	PRDM9	KMT8B|MEISETZ|MSBP3|PFM6|ZNF899	PR/SET domain 9	protein-coding
69.2666	chr10	96995345	96995770	+	0.233333	NA	3' UTR (NM_001346516, exon 8 of 8)	3' UTR (NM_001346516, exon 8 of 8)	-107199	NR_038330	100505540	Hs.568878	NR_038330	ENSG00000234855	SLIT1-AS1	-	SLIT1 antisense RNA 1	ncRNA
57.9	chr6	37239463	37239774	+	0.233333	NA	intron (NM_145316, intron 1 of 3)	Kanga1|DNA|TcMar-Tc2	17981	NM_145316	221468	Hs.520101	NM_145316	ENSG00000172738	TMEM217	C6orf128|dJ355M6.2	transmembrane protein 217	protein-coding
75.1666	chr4	91262337	91262951	+	0.233333	NA	intron (NM_001145065, intron 10 of 10)	intron (NM_001145065, intron 10 of 10)	1014658	NR_125920	101929194	Hs.626389	NR_125920		LNCPRESS2	-	lncRNA p53 regulated and ESC associated 2	ncRNA
76.1667	chr4	60032070	60032543	+	0.233333	NA	Intergenic	L1MB3|LINE|L1	-890313	NR_039652	100616450		NR_039652	ENSG00000265829	MIR548AG1	-	microRNA 548ag-1	ncRNA
62.9666	chr2	70820773	70821352	+	0.233333	NA	promoter-TSS (NM_001258027)	promoter-TSS (NM_001258027)	-463	NM_001258027	165530	Hs.681239	NM_173535	ENSG00000152672	CLEC4F	CLECSF13|KCLR	C-type lectin domain family 4 member F	protein-coding
26.6333-9	chr5	9882782	9882933	+	0.233333	NA	intron (NR_027112, intron 4 of 12)	L1PA10|LINE|L1	20967	NR_027112	285692	Hs.651487	NR_027112	ENSG00000249781	LINC02112	-	long intergenic non-protein coding RNA 2112	ncRNA
47.7667-2	chr19	4199233	4199583	+	0.233333	NA	intron (NM_133475, intron 2 of 21)	AluJo|SINE|Alu	16054	NM_133475	170961	Hs.197872	NM_133475	ENSG00000089847	ANKRD24	-	ankyrin repeat domain 24	protein-coding
47.3	chr1	34761888	34762363	+	0.233333	NA	3' UTR (NM_153212, exon 2 of 2)	3' UTR (NM_153212, exon 2 of 2)	2385	NM_153212	127534	Hs.351203	NM_153212	ENSG00000189433	GJB4	CX30.3|EKV|EKVP2	gap junction protein beta 4	protein-coding
33.0334-3	chr3	25649332	25649583	+	0.233333	NA	intron (NM_001330700, intron 1 of 35)	L1MB2|LINE|L1	14915	NM_001068	7155	Hs.475733	NM_001068	ENSG00000077097	TOP2B	TOPIIB|top2beta	DNA topoisomerase II beta	protein-coding
49.3666-2	chr5	4984437	4984799	+	0.233333	NA	Intergenic	Intergenic	-49741	NR_026994	340094	Hs.665092	NR_026994	ENSG00000215231	LINC01020	-	long intergenic non-protein coding RNA 1020	ncRNA
28.0666-4	chr6	54274617	54275056	+	0.233333	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	-33605	NM_014464	27283	Hs.127011	NM_014464	ENSG00000137251	TINAG	TIN-AG	tubulointerstitial nephritis antigen	protein-coding
78.1333	chr11	125686907	125687282	+	0.233333	NA	Intergenic	AluSp|SINE|Alu	-6247	NM_001612	56	Hs.169222	NM_001612	ENSG00000134940	ACRV1	D11S4365|SP-10|SPACA2	acrosomal vesicle protein 1	protein-coding
38.9333	chr12	31956669	31957182	+	0.233333	NA	Intergenic	AluJb|SINE|Alu	-2490	NM_018169	55196	Hs.445129	NM_018169	ENSG00000174718	RESF1	C12orf35|GET|KIAA1551|UTA2-1	retroelement silencing factor 1	protein-coding
40.5-5	chr2	28806027	28806310	+	0.233333	NA	Intergenic	AluSz6|SINE|Alu	-4666	NM_182756	245711	Hs.511956	NM_182756	ENSG00000163806	SPDYA	RINGO3|RINGOA|SPDY1|SPY1	speedy/RINGO cell cycle regulator family member A	protein-coding
24.1666-2	chr16	13116918	13117021	+	0.233333	NA	intron (NM_001145204, intron 2 of 4)	intron (NM_001145204, intron 2 of 4)	215371	NM_001145204	729993	Hs.130661	NM_001145204	ENSG00000237515	SHISA9	CKAMP44	shisa family member 9	protein-coding
44.0666-3	chr18	3513668	3514070	+	0.233333	NA	intron (NM_001242762, intron 7 of 9)	intron (NM_001242762, intron 7 of 9)	47619	NR_110429	100505592	Hs.635114	NR_110428	ENSG00000266835	GAPLINC	LINC01540	gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA	ncRNA
23.1333-11	chr8	130628862	130628980	+	0.233333	NA	Intergenic	Intergenic	-185247	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	protein-coding
62.5333	chr3	79299827	79300326	+	0.233333	NA	intron (NM_002941, intron 2 of 30)	LTR12C|LTR|ERV1	-111651	NR_110133	101927374	Hs.570644	NR_110133		LOC101927374	-	uncharacterized LOC101927374	ncRNA
49.8666	chr12	94793008	94793350	+	0.233333	NA	Intergenic	Intergenic	-41219	NR_030171	574449		NR_030171	ENSG00000283998	MIR492	MIRN492|hsa-mir-492	microRNA 492	ncRNA
52.6334	chr17	15092636	15093127	+	0.233333	NA	Intergenic	MamGypLTR3a|LTR|Gypsy	13306	NR_103559	94151	Hs.98684	NR_103559		CDRT8	-	CMT1A duplicated region transcript 8	ncRNA
36.6666-3	chr4	99100147	99100318	+	0.233333	NA	intron (NR_037884, intron 1 of 9)	intron (NR_037884, intron 1 of 9)	11375	NR_037884	100507053	Hs.635084	NR_037884	ENSG00000246090	LOC100507053	-	uncharacterized LOC100507053	ncRNA
58.9999-2	chr4	53574663	53575127	+	0.233333	NA	intron (NM_001126328, intron 1 of 10)	intron (NM_001126328, intron 1 of 10)	16591	NM_001126328	84708	Hs.518760	NM_032622	ENSG00000072201	LNX1	LNX|MPDZ|PDZRN2	ligand of numb-protein X 1	protein-coding
38.2-4	chr4	92334900	92335260	+	0.233333	NA	intron (NM_001286838, intron 1 of 14)	intron (NM_001286838, intron 1 of 14)	30681	NM_001286838	2895	Hs.162727	NM_001510	ENSG00000152208	GRID2	GluD2|SCAR18	glutamate ionotropic receptor delta type subunit 2	protein-coding
41.2333-3	chr2	105469831	105470323	+	0.233333	NA	Intergenic	Intergenic	-31564	NM_001318897	2274	Hs.443687	NM_001450	ENSG00000115641	FHL2	AAG11|DRAL|FHL-2|SLIM-3|SLIM3	four and a half LIM domains 2	protein-coding
55.7333-2	chr16	4113165	4113403	+	0.233333	NA	intron (NM_001116, intron 2 of 10)	MIRc|SINE|MIR	3158	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding
86.0666	chr5	85396246	85396868	+	0.233333	NA	Intergenic	Intergenic	-885887	NR_003719	285622	Hs.449272	NR_003719		NBPF22P	-	NBPF member 22, pseudogene	pseudo
49.1333	chr8	19185532	19186082	+	0.233333	NA	intron (NR_038919, intron 3 of 4)	MLT2B4|LTR|ERVL	59715	NR_038919	100128993	Hs.697742	NR_038919		LOC100128993	-	uncharacterized LOC100128993	ncRNA
33.2667-2	chr10	31186678	31186932	+	0.233333	NA	Intergenic	Intergenic	-1078	NR_134478	101929352	Hs.209289	NR_134478		LINC02664	-	long intergenic non-protein coding RNA 2664	ncRNA
56.6-2	chr3	173307951	173308324	+	0.233333	NA	Intergenic	Intergenic	-87815	NM_001365924	22871	Hs.478289	NM_014932	ENSG00000169760	NLGN1	NL1	neuroligin 1	protein-coding
23.4333-2	chr1	75957650	75957818	+	0.233333	NA	Intergenic	Intergenic	-25330	NM_080868	127247	Hs.125423	NM_080868	ENSG00000154007	ASB17	Asb-17	ankyrin repeat and SOCS box containing 17	protein-coding
34.4333-11	chr2	229580721	229580934	+	0.233333	NA	intron (NM_139072, intron 4 of 12)	intron (NM_139072, intron 4 of 12)	133728	NM_139072	92737	Hs.234074	NM_139072	ENSG00000187957	DNER	UNQ26|bet	delta/notch like EGF repeat containing	protein-coding
58.2666-3	chr3	95951763	95952175	+	0.233333	NA	Intergenic	L1MA6|LINE|L1	-268776	NR_077228	100287639	Hs.591320	NR_077228	ENSG00000244681	MTHFD2P1	-	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1	pseudo
30.3-5	chr3	54143041	54143215	+	0.233333	NA	intron (NM_018398, intron 2 of 37)	intron (NM_018398, intron 2 of 37)	20576	NM_018398	55799	Hs.656687	NM_018398	ENSG00000157445	CACNA2D3	HSA272268	calcium voltage-gated channel auxiliary subunit alpha2delta 3	protein-coding
25.3666-7	chr8	117233177	117233293	+	0.233333	NA	Intergenic	Intergenic	98240	NM_173851	169026	Hs.532270	NM_173851	ENSG00000164756	SLC30A8	ZNT8|ZnT-8	solute carrier family 30 member 8	protein-coding
50.1333	chr2	223140298	223140613	+	0.233333	NA	Intergenic	(ATTAT)n|Simple_repeat|Simple_repeat	88525	NM_080671	23704	Hs.348522	NM_080671	ENSG00000152049	KCNE4	MIRP3	potassium voltage-gated channel subfamily E regulatory subunit 4	protein-coding
21.6333-5	chr18	11291375	11291547	+	0.233333	NA	Intergenic	L1M5|LINE|L1	-142699	NM_022068	63895	Hs.436902	NM_022068	ENSG00000154864	PIEZO2	C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS	piezo type mechanosensitive ion channel component 2	protein-coding
49.8333	chr2	58795372	58795780	+	0.233333	NA	intron (NR_033873, intron 2 of 13)	L1MEi|LINE|L1	274823	NR_033873	400955	Hs.503210	NR_033873	ENSG00000233723	LINC01122	-	long intergenic non-protein coding RNA 1122	ncRNA
28.0666-6	chr9	76817425	76817637	+	0.233333	NA	intron (NM_001308048, intron 6 of 17)	MLT1J1|LTR|ERVL-MaLR	53095	NR_132312	50652	Hs.663766	NR_015342	ENSG00000225937	PCA3	DD3|NCRNA00019|PCAT3|PRUNE2-AS1	prostate cancer associated 3	ncRNA
31.8666	chr11	30462321	30462556	+	0.233333	NA	intron (NM_001584, intron 3 of 5)	intron (NM_001584, intron 3 of 5)	118055	NM_001584	744	Hs.289795	NM_001584	ENSG00000066382	MPPED2	239FB|C11orf8	metallophosphoesterase domain containing 2	protein-coding
52.6333	chr1	193879691	193880137	+	0.233333	NA	Intergenic	AluSx|SINE|Alu	575169	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
40.5-7	chr20	2545458	2545736	+	0.233333	NA	intron (NM_080751, intron 2 of 19)	MER110-int|LTR|ERV1	8990	NM_080751	117532	Hs.352626	NM_080751	ENSG00000149488	TMC2	C20orf145	transmembrane channel like 2	protein-coding
48.1-5	chr7	9755807	9756175	+	0.233333	NA	Intergenic	Intergenic	121721	NR_002790	168741	Hs.545134	NR_002790		PER4	-	period circadian regulator 3 pseudogene	pseudo
24.5666-4	chr3	38157898	38158166	+	0.233333	NA	Intergenic	Intergenic	-7505	NM_005109	9943	Hs.475970	NM_005109	ENSG00000172939	OXSR1	OSR1	oxidative stress responsive kinase 1	protein-coding
22.1-5	chr2	61578971	61579085	+	0.233333	NA	Intergenic	Intergenic	-40672	NM_003400	7514	Hs.370770	NM_003400	ENSG00000082898	XPO1	CRM-1|CRM1|emb|exp1	exportin 1	protein-coding
53.9333-2	chr20	59148777	59149107	+	0.233333	NA	Intergenic	Intergenic	-42078	NM_178457	128611	Hs.473204	NM_178457	ENSG00000124203	ZNF831	C20orf174	zinc finger protein 831	protein-coding
46.9	chr1	81357972	81358471	+	0.233333	NA	intron (NM_001366003, intron 2 of 27)	intron (NM_001366003, intron 2 of 27)	51826	NM_001366008	23266	Hs.24212	NM_012302	ENSG00000117114	ADGRL2	CIRL2|CL2|LEC1|LPHH1|LPHN2	adhesion G protein-coupled receptor L2	protein-coding
88.0332	chr3	74778628	74779016	+	0.233333	NA	Intergenic	Intergenic	-257682	NM_020872	5067	Hs.12723	NM_020872	ENSG00000113805	CNTN3	BIG-1|PANG|PCS	contactin 3	protein-coding
73.4668	chr8	51593955	51594423	+	0.233333	NA	intron (NM_144651, intron 2 of 22)	intron (NM_144651, intron 2 of 22)	215256	NM_144651	137902	Hs.444882	NM_144651	ENSG00000147485	PXDNL	PMR1|PRM1|VPO2	peroxidasin like	protein-coding
48.9999-2	chr7	37400931	37401314	+	0.233333	NA	intron (NM_001206480, intron 1 of 21)	intron (NM_001206480, intron 1 of 21)	-47454	NM_001206482	9844	Hs.434989	NM_014800	ENSG00000155849	ELMO1	CED-12|CED12|ELMO-1	engulfment and cell motility 1	protein-coding
25.1-6	chr2	47628414	47628722	+	0.233333	NA	Intergenic	Intergenic	-58237	NM_022055	56660	Hs.591586	NM_022055	ENSG00000184261	KCNK12	K2p12.1|THIK-2|THIK2	potassium two pore domain channel subfamily K member 12	protein-coding
46.8666	chr10	23553025	23553347	+	0.233333	NA	Intergenic	L1ME3G|LINE|L1	113917	NM_001145373	220213	Hs.499042	NM_001145373	ENSG00000165312	OTUD1	DUBA7|OTDC1	OTU deubiquitinase 1	protein-coding
49.6999	chr2	166777385	166777666	+	0.233333	NA	Intergenic	Intergenic	-110962	NM_152381	129446	Hs.73680	NM_152381	ENSG00000163092	XIRP2	CMYA3	xin actin binding repeat containing 2	protein-coding
70.0333-2	chr16	19259421	19259786	+	0.233333	NA	intron (NM_001308157, intron 7 of 7)	intron (NM_001308157, intron 7 of 7)	-26128	NM_001256720	728276	Hs.632180	NM_001256720	ENSG00000261210	CLEC19A	-	C-type lectin domain containing 19A	protein-coding
45.2666-4	chr15	55968466	55968960	+	0.233333	NA	intron (NM_001329212, intron 1 of 28)	L1MC|LINE|L1	24899	NM_006154	4734	Hs.1565	NM_006154	ENSG00000069869	NEDD4	NEDD4-1|RPF1	NEDD4 E3 ubiquitin protein ligase	protein-coding
34.7666	chr12	56599269	56599465	+	0.233333	NA	intron (NM_001351156, intron 28 of 30)	intron (NM_001351156, intron 28 of 30)	30959	NM_001300905	11176	Hs.314263	NM_013449	ENSG00000076108	BAZ2A	TIP5|WALp3	bromodomain adjacent to zinc finger domain 2A	protein-coding
44.7999	chr3	94925128	94925396	+	0.233333	NA	Intergenic	Intergenic	-13001	NR_015400	255025	Hs.130994	NR_015400	ENSG00000239589	LINC00879	-	long intergenic non-protein coding RNA 879	ncRNA
59.3999	chr2	19969074	19969345	+	0.233333	NA	intron (NM_001006657, intron 9 of 27)	LTR33|LTR|ERVL	20896	NM_020779	57539	Hs.205427	NM_020779	ENSG00000118965	WDR35	CED2|IFT121|IFTA1|SRTD7	WD repeat domain 35	protein-coding
28.6-24	chr8	127125178	127125417	+	0.233333	NA	Intergenic	Intergenic	-43076	NR_119373	103164619	Hs.571401	NR_119373	ENSG00000254166	PCAT2	CARLO4|CARLo-4|PCA2|TCONS_00015167	prostate cancer associated transcript 2	ncRNA
63.6999	chr20	47552096	47552625	+	0.233333	NA	intron (NM_181659, intron 1 of 22)	intron (NM_181659, intron 1 of 22)	50473	NM_181659	8202	Hs.592142	NM_006534	ENSG00000124151	NCOA3	ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP	nuclear receptor coactivator 3	protein-coding
35.2666-4	chr22	33702304	33702537	+	0.233333	NA	intron (NM_133642, intron 2 of 14)	intron (NM_133642, intron 2 of 14)	2500	NR_145833	109616998		NR_145833	ENSG00000253007	SNORA50B	-	small nucleolar RNA, H/ACA box 50B	snoRNA
72.5665	chr18	65631583	65632055	+	0.233333	NA	Intergenic	Intergenic	-118433	NM_033646	1005	Hs.541003	NM_004361	ENSG00000081138	CDH7	CDH7L1	cadherin 7	protein-coding
56.6333-2	chr6	153309972	153310352	+	0.233333	NA	Intergenic	Intergenic	-178880	NM_012419	26575	Hs.166313	NM_012419	ENSG00000091844	RGS17	RGS-17|RGSZ2|hRGS17	regulator of G protein signaling 17	protein-coding
34.2667-6	chr2	188439015	188439347	+	0.233333	NA	intron (NM_016315, intron 2 of 11)	intron (NM_016315, intron 2 of 11)	141689	NR_030287	693146		NR_030287	ENSG00000207951	MIR561	MIRN561|hsa-mir-561|mir-561	microRNA 561	ncRNA
53.6999-3	chr14	49617095	49617520	+	0.233333	NA	Intergenic	AluJb|SINE|Alu	3319	NM_001001	6166	Hs.444749	NM_001001	ENSG00000165502	RPL36AL	RPL36A	ribosomal protein L36a like	protein-coding
69.4332	chr5	35710617	35711019	+	0.233333	NA	intron (NM_024867, intron 19 of 36)	intron (NM_024867, intron 19 of 36)	92955	NM_144722	79925	Hs.298863	NM_024867	ENSG00000152582	SPEF2	CT122|KPL2	sperm flagellar 2	protein-coding
27.4666	chr1	168056648	168056856	+	0.233333	NA	intron (NM_001198956, intron 17 of 21)	MER103C|DNA|hAT-Charlie	58092	NR_031702	100313835		NR_031702	ENSG00000221545	MIR1255B2	MIR1255B-2|MIRN1255B2|hsa-mir-1255b-2	microRNA 1255b-2	ncRNA
53.1666	chr13	38724042	38724331	+	0.233333	NA	intron (NM_207361, intron 2 of 23)	intron (NM_207361, intron 2 of 23)	37109	NM_207361	341640	Hs.253994	NM_207361	ENSG00000150893	FREM2	CRYPTOP|FRASRS2	FRAS1 related extracellular matrix 2	protein-coding
64.6667	chr2	160490501	160490924	+	0.233333	NA	intron (NM_002897, intron 1 of 13)	intron (NM_002897, intron 1 of 13)	3095	NM_016836	5937	Hs.470412	NM_002897	ENSG00000153250	RBMS1	C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1	RNA binding motif single stranded interacting protein 1	protein-coding
28.5667-10	chr2	11796078	11796252	+	0.233333	NA	intron (NM_001349203, intron 14 of 20)	intron (NM_001349203, intron 14 of 20)	28721	NR_036071	100422862		NR_036071	ENSG00000265056	MIR548S	-	microRNA 548s	ncRNA
38.2-3	chr18	76135253	76135563	+	0.233333	NA	intron (NR_040034, intron 4 of 5)	MSTB|LTR|ERVL-MaLR	12410	NR_040034	339298	Hs.151215	NR_040034	ENSG00000263547	LOC339298	-	uncharacterized LOC339298	ncRNA
63.1333-2	chr6	42802589	42803044	+	0.233333	NA	intron (NM_001318819, intron 2 of 13)	FLAM_C|SINE|Alu	-18240	NM_015349	23506	Hs.658033	NM_015349	ENSG00000112624	BICRAL	GLTSCR1L|KIAA0240	BRD4 interacting chromatin remodeling complex associated protein like	protein-coding
83.7667	chr8	109495948	109496557	+	0.233333	NA	intron (NM_177531, intron 63 of 77)	L2a|LINE|L2	-43448	NM_198120	9166	Hs.409368	NM_004215	ENSG00000147654	EBAG9	EB9|PDAF	estrogen receptor binding site associated antigen 9	protein-coding
71.5334	chr7	135088709	135089098	+	0.233333	NA	intron (NR_144293, intron 10 of 10)	L1MA5|LINE|L1	-59169	NM_018295	55281	Hs.521213	NM_018295	ENSG00000146859	TMEM140	-	transmembrane protein 140	protein-coding
53.6999-2	chr10	25018916	25019242	+	0.233333	NA	intron (NM_024838, intron 1 of 2)	intron (NM_024838, intron 1 of 2)	2467	NM_024838	79896	Hs.645274	NM_024838	ENSG00000185875	THNSL1	TSH1	threonine synthase like 1	protein-coding
52.8999	chr1	229304118	229304408	+	0.233333	NA	promoter-TSS (NM_006542)	promoter-TSS (NM_006542)	-119	NM_006542	10638	Hs.296169	NM_006542	ENSG00000213029	SPHAR	-	S-phase response (cyclin related)	protein-coding
29.8666	chr1	212685974	212686312	+	0.233333	NA	TTS (NM_018664)	TTS (NM_018664)	13697	NM_018664	55509	Hs.62919	NM_018664	ENSG00000123685	BATF3	JDP1|JUNDM1|SNFT	basic leucine zipper ATF-like transcription factor 3	protein-coding
71.7332	chr3	65433901	65434339	+	0.233333	NA	intron (NM_001365904, intron 10 of 24)	intron (NM_001365904, intron 10 of 24)	-459696	NR_046575	100873983	Hs.663889	NR_046575	ENSG00000240175	MAGI1-AS1	-	MAGI1 antisense RNA 1	ncRNA
26.3667-9	chr5	77738052	77738307	+	0.233333	NA	intron (NM_004607, intron 1 of 3)	intron (NM_004607, intron 1 of 3)	38160	NM_001297738	6902	Hs.291212	NM_004607	ENSG00000171530	TBCA	-	tubulin folding cofactor A	protein-coding
43.7666	chr2	126610400	126610682	+	0.233333	NA	Intergenic	Intergenic	-45394	NM_001256584	2995	Hs.59138	NM_002101	ENSG00000136732	GYPC	CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2'	glycophorin C (Gerbich blood group)	protein-coding
51.1666	chr15	75050816	75051241	+	0.233333	NA	TTS (NM_001301103)	TTS (NM_001301103)	7742	NM_001301105	60490	Hs.458922	NM_021823	ENSG00000138621	PPCDC	MDS018|PPC-DC|coaC	phosphopantothenoylcysteine decarboxylase	protein-coding
49.1666	chr15	93127793	93128025	+	0.233333	NA	Intergenic	Intergenic	-38698	NM_020211	56963	Hs.271277	NM_020211	ENSG00000182175	RGMA	RGM	repulsive guidance molecule BMP co-receptor a	protein-coding
25.3-11	chr3	115645081	115645241	+	0.233333	NA	intron (NM_002045, intron 1 of 2)	intron (NM_002045, intron 1 of 2)	21651	NM_002045	2596	Hs.134974	NM_002045	ENSG00000172020	GAP43	B-50|PP46	growth associated protein 43	protein-coding
33.6333-2	chr16	6645148	6645451	+	0.233333	NA	intron (NM_018723, intron 2 of 15)	MLT1C|LTR|ERVL-MaLR	-128510	NM_001142334	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
57.7667-2	chr8	129332570	129333056	+	0.233333	NA	Intergenic	(TATATAA)n|Simple_repeat|Simple_repeat	-91573	NR_033916	728724	Hs.49902	NR_033916	ENSG00000229140	LINC00977	-	long intergenic non-protein coding RNA 977	ncRNA
73.3666	chr4	169402447	169402929	+	0.233333	NA	intron (NM_001199400, intron 29 of 32)	MIRc|SINE|MIR	-131732	NM_020870	57630	Hs.301804	NM_020870	ENSG00000154447	SH3RF1	POSH|RNF142|SH3MD2	SH3 domain containing ring finger 1	protein-coding
28.1	chr11	7075433	7075591	+	0.233333	NA	Intergenic	Intergenic	-13486	NM_014469	27288	Hs.121605	NM_014469	ENSG00000170748	RBMXL2	HNRNPG-T|HNRNPGT|HNRPGT	RBMX like 2	protein-coding
43.0999	chr2	210729061	210729324	+	0.233333	NA	Intergenic	Intergenic	111621	NR_002763	29034	Hs.658398	NR_002763	ENSG00000280837	CPS1-IT1	CPS1-IT|CPS1IT|CPS1IT1|PRO0132	CPS1 intronic transcript 1	ncRNA
49.3333-3	chr14	59168173	59168557	+	0.233333	NA	Intergenic	Intergenic	-20302	NM_001270520	23002	Hs.19156	NM_014992	ENSG00000100592	DAAM1	-	dishevelled associated activator of morphogenesis 1	protein-coding
82.6999	chr9	76014063	76014525	+	0.233333	NA	intron (NR_120409, intron 3 of 19)	intron (NR_120409, intron 3 of 19)	123621	NM_006200	5125	Hs.368542	NM_006200	ENSG00000099139	PCSK5	PC5|PC6|PC6A|SPC6	proprotein convertase subtilisin/kexin type 5	protein-coding
35.0333	chr1	77806884	77807257	+	0.233333	NA	exon (NM_001270384, exon 5 of 16)	exon (NM_001270384, exon 5 of 16)	27265	NM_001363584	374986	Hs.437755	NM_198549	ENSG00000180488	MIGA1	FAM73A	mitoguardin 1	protein-coding
52.5666	chr20	43071029	43071722	+	0.233333	NA	intron (NM_133170, intron 1 of 31)	MER5A|DNA|hAT-Charlie	102632	NR_149017	101927138	Hs.666740	NR_149017	ENSG00000227599	LOC101927138	-	uncharacterized LOC101927138	ncRNA
42.3333-5	chr9	24058551	24058818	+	0.233333	NA	Intergenic	Intergenic	-208083	NM_001351466	1993	Hs.166109	NM_004432	ENSG00000107105	ELAVL2	HEL-N1|HELN1|HUB	ELAV like RNA binding protein 2	protein-coding
28.0333-4	chr20	9097613	9097784	+	0.233333	NA	intron (NM_001172646, intron 1 of 37)	intron (NM_001172646, intron 1 of 37)	28644	NM_001172646	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding
49.2666-3	chr6	75864558	75864843	+	0.233333	NA	intron (NM_001300899, intron 16 of 32)	intron (NM_001300899, intron 16 of 32)	115461	NM_004999	4646	Hs.149387	NM_004999	ENSG00000196586	MYO6	DFNA22|DFNB37	myosin VI	protein-coding
56-2	chr4	115853000	115853444	+	0.233333	NA	Intergenic	L1PA14|LINE|L1	-446503	NR_031737	100302290		NR_031737	ENSG00000284253	MIR1973	hsa-mir-1973|mir-1973	microRNA 1973	ncRNA
49.8333-2	chr5	372171	372523	+	0.233333	NA	intron (NM_020731, intron 3 of 11)	intron (NM_020731, intron 3 of 11)	68171	NM_001242412	57491	Hs.50823	NM_020731	ENSG00000286169	AHRR	AHH|AHHR|bHLHe77	aryl-hydrocarbon receptor repressor	protein-coding
46.1666	chr10	94363368	94363810	+	0.233333	NA	promoter-TSS (NM_022451)	promoter-TSS (NM_022451)	-650	NM_022451	64318	Hs.74899	NM_022451	ENSG00000173145	NOC3L	AD24|C10orf117|FAD24	NOC3 like DNA replication regulator	protein-coding
41.7999-2	chr10	73383621	73383883	+	0.233333	NA	intron (NM_004034, intron 8 of 13)	intron (NM_004034, intron 8 of 13)	-24888	NM_001367801	118491	Hs.591367	NM_145170	ENSG00000156042	CFAP70	TTC18	cilia and flagella associated protein 70	protein-coding
37.3666	chr7	2008138	2008340	+	0.233333	NA	intron (NM_001013837, intron 13 of 18)	intron (NM_001013837, intron 13 of 18)	-67668	NM_001304525	8379	Hs.654838	NM_003550	ENSG00000002822	MAD1L1	MAD1|PIG9|TP53I9|TXBP181	mitotic arrest deficient 1 like 1	protein-coding
56.4-2	chr5	59485655	59485938	+	0.233333	NA	intron (NM_001349242, intron 1 of 16)	intron (NM_001349242, intron 1 of 16)	100702	NM_001349242	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
64.4001	chr10	51559048	51559399	+	0.233333	NA	intron (NM_001098512, intron 3 of 17)	intron (NM_001098512, intron 3 of 17)	140372	NM_015235	23283	Hs.591358	NM_015235	ENSG00000177613	CSTF2T	CstF-64T	cleavage stimulation factor subunit 2 tau variant	protein-coding
25.4-16	chr6	135834964	135835109	+	0.233333	NA	Intergenic	Intergenic	-16665	NM_018945	27115	Hs.744230	NM_018945	ENSG00000171408	PDE7B	bA472E5.1	phosphodiesterase 7B	protein-coding
45.7666-3	chr18	53120870	53121216	+	0.233333	NA	intron (NM_005215, intron 7 of 28)	intron (NM_005215, intron 7 of 28)	-116058	NR_130465	100616232		NR_130465	ENSG00000263872	MIR4528	-	microRNA 4528	ncRNA
29.5666-2	chr2	237222655	237222807	+	0.233333	NA	Intergenic	Intergenic	136842	NM_006710	10920	Hs.531713	NM_006710	ENSG00000198612	COPS8	COP9|CSN8|SGN8	COP9 signalosome subunit 8	protein-coding
45.8-7	chr5	152509887	152510184	+	0.233333	NA	Intergenic	AluJr4|SINE|Alu	-104756	NM_020167	56923	Hs.731911	NM_020167	ENSG00000132911	NMUR2	FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1	neuromedin U receptor 2	protein-coding
28.5333-5	chr19	28118607	28118752	+	0.233333	NA	Intergenic	LTR39-int|LTR|ERV1	-324739	NR_027301	148189	Hs.706547	NR_027301	ENSG00000261824	LINC00662	-	long intergenic non-protein coding RNA 662	ncRNA
62.4665	chr14	69160441	69160850	+	0.233333	NA	Intergenic	L1MB7|LINE|L1	-7448	NM_001284206	8816	Hs.509780	NM_003861	ENSG00000139990	DCAF5	BCRG2|BCRP2|D14S1461E|WDR22	DDB1 and CUL4 associated factor 5	protein-coding
18.5333-18	chr3	33405669	33405753	+	0.233333	NA	intron (NM_001128160, intron 7 of 14)	AluJr4|SINE|Alu	34667	NM_001128160	7342	Hs.729120	NM_014517	ENSG00000153560	UBP1	LBP-1B|LBP-1a|LBP1A|LBP1B	upstream binding protein 1	protein-coding
51.4999	chr8	66181824	66182143	+	0.233333	NA	Intergenic	Intergenic	-3519	NM_000756	1392	Hs.75294	NM_000756	ENSG00000147571	CRH	CRF|CRH1	corticotropin releasing hormone	protein-coding
97.5333	chr5	150897557	150898370	+	0.233333	NA	intron (NM_052860, intron 5 of 5)	intron (NM_052860, intron 5 of 5)	7020	NM_001172832	91975	Hs.134885	NM_052860	ENSG00000145908	ZNF300	-	zinc finger protein 300	protein-coding
27.2334	chr3	112865079	112865268	+	0.233333	NA	Intergenic	L1MA4A|LINE|L1	-19223	NM_001370552	344807	Hs.531814	NM_001008784	ENSG00000206531	CD200R1L	CD200R2|CD200RLa	CD200 receptor 1 like	protein-coding
23.2333-7	chr5	20110931	20111091	+	0.233333	NA	intron (NM_001291956, intron 2 of 14)	intron (NM_001291956, intron 2 of 14)	-122811	NM_001349563	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
31.9	chr12	127339545	127339750	+	0.233333	NA	intron (NR_110057, intron 1 of 2)	intron (NR_110057, intron 1 of 2)	425	NR_110057	101927616	Hs.637827	NR_110057	ENSG00000256362	LINC02375	-	long intergenic non-protein coding RNA 2375	ncRNA
19.9-2	chr10	77967407	77967574	+	0.233333	NA	Intergenic	L1ME4b|LINE|L1	40678	NR_024585	100128292	Hs.547908	NR_024585		DLG5-AS1	-	DLG5 antisense RNA 1	ncRNA
27.6667-10	chr2	75517931	75518320	+	0.233333	NA	exon (NM_001135032, exon 3 of 4)	exon (NM_001135032, exon 3 of 4)	-5943	NR_110281	101927884	Hs.671110	NR_110281	ENSG00000231172	LOC101927884	-	uncharacterized LOC101927884	ncRNA
104.6	chr12	48293146	48293615	+	0.233333	NA	Intergenic	Intergenic	-35600	NM_181788	341567	Hs.155833	NM_181788	ENSG00000187166	H1FNT	H1.7|H1T2	H1 histone family member N, testis specific	protein-coding
68.4001-4	chr3	73449757	73450154	+	0.233333	NA	intron (NM_015009, intron 3 of 9)	intron (NM_015009, intron 3 of 9)	-15960	NM_001303142	23024	Hs.660347	NM_015009	ENSG00000121440	PDZRN3	LNX3|SEMACAP3|SEMCAP3	PDZ domain containing ring finger 3	protein-coding
46.4666-3	chr8	132678308	132678567	+	0.233333	NA	Intergenic	LTR56|LTR|ERV1	-2892	NM_012472	23639	Hs.591865	NM_012472	ENSG00000129295	LRRC6	CILD19|LRTP|TSLRP	leucine rich repeat containing 6	protein-coding
19.8666	chr14	67717811	67717974	+	0.233333	NA	intron (NM_152443, intron 1 of 8)	AluJo|SINE|Alu	16006	NM_152443	145226	Hs.415322	NM_152443	ENSG00000139988	RDH12	LCA13|RP53|SDR7C2	retinol dehydrogenase 12	protein-coding
35.1666-4	chr5	41255886	41256102	+	0.233333	NA	intron (NM_001115131, intron 1 of 17)	intron (NM_001115131, intron 1 of 17)	5475	NM_001115131	729	Hs.481992	NM_000065	ENSG00000039537	C6	-	complement C6	protein-coding
56.6333	chr19	4747533	4747862	+	0.233333	NA	Intergenic	Intergenic	-21408	NR_027148	284424	Hs.326728	NM_174947	ENSG00000176840	MIR7-3HG	C19orf30|Huh7|LINC00306|NCRNA00306|PGSF1|uc002mbe.2	MIR7-3 host gene	ncRNA
41.4333-3	chr7	41516407	41516672	+	0.233333	NA	Intergenic	Intergenic	-177380	NR_027118	285954	Hs.656869	NR_027118	ENSG00000224116	INHBA-AS1	-	INHBA antisense RNA 1	ncRNA
38.2666	chr1	35981785	35982012	+	0.233333	NA	intron (NM_024852, intron 5 of 18)	intron (NM_024852, intron 5 of 18)	50793	NM_024852	192669	Hs.657659	NM_024852	ENSG00000126070	AGO3	EIF2C3	argonaute RISC catalytic component 3	protein-coding
37.2667-8	chr8	52753652	52753858	+	0.233333	NA	Intergenic	MER65-int|LTR|ERV1	-39289	NM_001083617	9821	Hs.196102	NM_014781	ENSG00000023287	RB1CC1	ATG17|CC1|FIP200|PPP1R131	RB1 inducible coiled-coil 1	protein-coding
63.2333	chr10	17870505	17870891	+	0.233333	NA	intron (NM_002438, intron 13 of 29)	intron (NM_002438, intron 13 of 29)	25591	NR_030167	574445		NR_030167	ENSG00000207938	MIR511	MIR511-1|MIR511-2|MIRN511-1|MIRN511-2|hsa-mir-511|hsa-mir-511-2|mir-511	microRNA 511	ncRNA
37-8	chr8	11756596	11757057	+	0.233333	NA	intron (NM_001308093, intron 4 of 5)	intron (NM_001308093, intron 4 of 5)	-4430	NM_001031839	606553	Hs.545529	NM_001031839		C8orf49	G4DM	chromosome 8 open reading frame 49	protein-coding
25.3-4	chr12	94142439	94142605	+	0.233333	NA	Intergenic	Intergenic	-6055	NM_005761	10154	Hs.584845	NM_005761	ENSG00000136040	PLXNC1	CD232|PLXN-C1|VESPR	plexin C1	protein-coding
57.3-2	chr7	106164121	106164723	+	0.233333	NA	Intergenic	Intergenic	-51846	NM_006754	6856	Hs.80919	NM_006754	ENSG00000008282	SYPL1	H-SP1|SYPL	synaptophysin like 1	protein-coding
83.6999	chr19	11744031	11744435	+	0.233333	NA	Intergenic	AluSp|SINE|Alu	-5287	NM_017507	55552	Hs.142167	NM_017507	ENSG00000197933	ZNF823	HSZFP36	zinc finger protein 823	protein-coding
81.0666	chr5	24734337	24734907	+	0.233333	NA	Intergenic	Intergenic	-89644	NM_001317222	1008	Hs.92489	NM_006727	ENSG00000040731	CDH10	-	cadherin 10	protein-coding
52.6333-2	chr15	61866440	61866729	+	0.233333	NA	3' UTR (NM_018080, exon 80 of 80)	3' UTR (NM_018080, exon 80 of 80)	136666	NR_146448	100506530	Hs.42265	NR_146448	ENSG00000259284	LINC02349	-	long intergenic non-protein coding RNA 2349	ncRNA
57.7666	chr10	15942046	15942422	+	0.233333	NA	Intergenic	Intergenic	-81701	NM_001318330	80013	Hs.158870	NM_024948	ENSG00000148481	MINDY3	C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042	MINDY lysine 48 deubiquitinase 3	protein-coding
49.3334-2	chr14	83399302	83399670	+	0.233333	NA	Intergenic	Intergenic	756854	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
49.8667	chr17	61317142	61317384	+	0.233333	NA	intron (NM_001330413, intron 23 of 25)	intron (NM_001330413, intron 23 of 25)	50441	NR_136397	101927855	Hs.662123	NR_136397	ENSG00000267131	LOC101927855	-	uncharacterized LOC101927855	ncRNA
61.0332	chr14	55551140	55551500	+	0.233333	NA	Intergenic	L1MC1|LINE|L1	28772	NR_027123	100129075	Hs.633724	NR_027123	ENSG00000186615	KTN1-AS1	C14orf33|MYCLo-3	KTN1 antisense RNA 1	ncRNA
43.6-3	chr3	152062816	152063091	+	0.233333	NA	Intergenic	Intergenic	-134778	NR_110203	101928142	Hs.680207	NR_110202		AADACL2-AS1	-	AADACL2 antisense RNA 1	ncRNA
27.4-6	chr14	43337518	43337685	+	0.233333	NA	Intergenic	Intergenic	1169682	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
41.7-2	chr16	12557794	12558052	+	0.233333	NA	intron (NM_032167, intron 20 of 20)	intron (NM_032167, intron 20 of 20)	-162398	NR_039869	100616195		NR_039869	ENSG00000264733	MIR4718	-	microRNA 4718	ncRNA
36.9-2	chr18	59661647	59661934	+	0.233333	NA	intron (NM_133459, intron 2 of 10)	AluSz|SINE|Alu	35633	NM_133459	147372	Hs.34333	NM_133459	ENSG00000183287	CCBE1	HKLLS1	collagen and calcium binding EGF domains 1	protein-coding
27.5666	chr11	21789277	21789491	+	0.233333	NA	Intergenic	L1MA2|LINE|L1	-403701	NM_001142649	203859	Hs.154329	NM_213599	ENSG00000171714	ANO5	GDD1|LGMD2L|LGMDR12|TMEM16E	anoctamin 5	protein-coding
62.1332	chr5	156724488	156724885	+	0.233333	NA	intron (NM_001128209, intron 6 of 7)	intron (NM_001128209, intron 6 of 7)	-125609	NM_206858	153743	Hs.567727	NM_206858	ENSG00000231989	PPP1R2B	PPP1R2P3	PPP1R2 family member B	protein-coding
54.6333	chr5	103610768	103611144	+	0.233333	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-48167	NM_001300741	83594	Hs.434289	NM_031438	ENSG00000112874	NUDT12	-	nudix hydrolase 12	protein-coding
33.6666	chr10	60375924	60376122	+	0.233333	NA	intron (NM_001204403, intron 2 of 43)	MIRb|SINE|MIR	13852	NM_001320874	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding
40.8333-3	chr8	137147323	137147509	+	0.233333	NA	Intergenic	Intergenic	266172	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
60.5333-3	chr14	84168245	84168907	+	0.233333	NA	Intergenic	LTR37A|LTR|ERV1	-1103356	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
45.3666-3	chr8	51400284	51400768	+	0.233333	NA	intron (NM_144651, intron 17 of 22)	intron (NM_144651, intron 17 of 22)	408919	NM_144651	137902	Hs.444882	NM_144651	ENSG00000147485	PXDNL	PMR1|PRM1|VPO2	peroxidasin like	protein-coding
55.1	chrX	39463941	39464258	+	0.233333	NA	Intergenic	LTR16A2|LTR|ERVL	-72325	NR_110385	101927449	Hs.553988	NR_110385	ENSG00000236747	LINC01282	-	long intergenic non-protein coding RNA 1282	ncRNA
28.5333-11	chr7	71687428	71687668	+	0.233333	NA	intron (NM_022479, intron 9 of 10)	intron (NM_022479, intron 9 of 10)	-379778	NR_037477	100500836		NR_037477	ENSG00000265878	MIR3914-1	-	microRNA 3914-1	ncRNA
19.3667	chr1	174168453	174168615	+	0.233333	NA	intron (NM_001366445, intron 1 of 13)	intron (NM_001366445, intron 1 of 13)	9014	NR_158982	9910	Hs.585378	NM_014857	ENSG00000152061	RABGAP1L	HHL|TBC1D18	RAB GTPase activating protein 1 like	protein-coding
69.1332	chr5	166048184	166048670	+	0.233333	NA	Intergenic	Intergenic	877943	NR_108020	102557615		NR_108020	ENSG00000254130	LINC01947	CTB-7E3.1	long intergenic non-protein coding RNA 1947	ncRNA
40.2333-3	chr6	139937899	139938129	+	0.233333	NA	Intergenic	Intergenic	-38305	NR_121623	100507477	Hs.179213	NR_121622	ENSG00000236013	LOC100507477	-	uncharacterized LOC100507477	ncRNA
39.4333-3	chr12	83540743	83540997	+	0.233333	NA	Intergenic	Intergenic	853715	NM_001320322	160335	Hs.577775	NM_152588	ENSG00000179104	TMTC2	IBDBP1	transmembrane O-mannosyltransferase targeting cadherins 2	protein-coding
64.2333	chr22	25852257	25852558	+	0.233333	NA	intron (NM_001318245, intron 21 of 43)	(AATG)n|Simple_repeat|Simple_repeat	110219	NM_001318245	84700	Hs.417959	NM_032608	ENSG00000133454	MYO18B	KFS4	myosin XVIIIB	protein-coding
36.5333-4	chr4	93814382	93814599	+	0.233333	NA	Intergenic	Intergenic	-14263	NM_005172	474	Hs.532680	NM_005172	ENSG00000172238	ATOH1	ATH1|HATH1|MATH-1|bHLHa14	atonal bHLH transcription factor 1	protein-coding
40.7666	chr14	34603361	34603639	+	0.233333	NA	intron (NM_001366519, intron 4 of 12)	intron (NM_001366519, intron 4 of 12)	26648	NM_001366519	58533	Hs.276523	NM_021249	ENSG00000129515	SNX6	MSTP010|TFAF2	sorting nexin 6	protein-coding
44.3333-4	chr5	140208618	140209164	+	0.233333	NA	intron (NM_032412, intron 2 of 2)	AluY|SINE|Alu	33703	NM_032412	84418	Hs.529798	NM_032412	ENSG00000120306	CYSTM1	C5orf32|ORF1-FL49	cysteine rich transmembrane module containing 1	protein-coding
55.7333-3	chr2	41724635	41724950	+	0.233333	NA	Intergenic	Intergenic	-152763	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA
22-13	chr8	140803370	140803516	+	0.233333	NA	intron (NM_001352716, intron 10 of 34)	intron (NM_001352716, intron 10 of 34)	-70790	NR_029892	442893		NR_029892	ENSG00000254324	MIR151A	MIR151|MIRN151|hsa-mir-151|hsa-mir-151a	microRNA 151a	ncRNA
36.6666-2	chr3	165034678	165034963	+	0.233333	NA	intron (NM_001041, intron 22 of 47)	L2|LINE|L2	43676	NM_001041	6476	Hs.429596	NM_001041	ENSG00000090402	SI	-	sucrase-isomaltase	protein-coding
36.7-2	chr11	65420444	65421042	+	0.233333	NA	Intergenic	AluJr|SINE|Alu	-2055	NR_131012	283131	Hs.523789	NR_002802	ENSG00000245532	NEAT1	LINC00084|NCRNA00084|TncRNA|VINC	nuclear paraspeckle assembly transcript 1	ncRNA
24.7666-2	chr2	208270177	208270479	+	0.233333	NA	intron (NM_001178000, intron 1 of 11)	AluSq|SINE|Alu	4061	NM_152671	200576	Hs.744997	NM_015040	ENSG00000115020	PIKFYVE	CFD|FAB1|HEL37|PIP5K|PIP5K3|ZFYVE29	phosphoinositide kinase, FYVE-type zinc finger containing	protein-coding
69.8667	chr12	32822932	32823540	+	0.233333	NA	intron (NM_001005242, intron 7 of 12)	AluSx|SINE|Alu	-67339	NM_001040436	51067	Hs.505231	NM_015936	ENSG00000139131	YARS2	CGI-04|MLASA2|MT-TYRRS|TYRRS	tyrosyl-tRNA synthetase 2	protein-coding
60.6999	chr5	34439388	34439768	+	0.233333	NA	Intergenic	Intergenic	-194854	NR_146599	114899	Hs.171929	NM_030945	ENSG00000082196	C1QTNF3	C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3	C1q and TNF related 3	protein-coding
44.4-6	chr15	88429983	88430400	+	0.233333	NA	Intergenic	Intergenic	37197	NM_022163	26589	Hs.534261	NM_022163	ENSG00000259494	MRPL46	C15orf4|LIECG2|P2ECSL	mitochondrial ribosomal protein L46	protein-coding
41.8666-9	chr6	4269107	4269730	+	0.233333	NA	Intergenic	Intergenic	-79389	NR_125874	102724096	Hs.571140	NR_125874		LOC102724096	-	uncharacterized LOC102724096	ncRNA
23-5	chr15	57143103	57143284	+	0.233333	NA	intron (NM_207038, intron 5 of 19)	L1MC4|LINE|L1	-76237	NM_207040	6938	Hs.511504	NM_003205	ENSG00000140262	TCF12	CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64	transcription factor 12	protein-coding
56.6999-2	chr8	102811076	102811421	+	0.233333	NA	TTS (NR_149020)	TTS (NR_149020)	4426	NR_149020	401472		NR_149020		GASAL1	GASL1	growth arrest associated lncRNA 1	ncRNA
33.2-3	chr10	128465535	128465808	+	0.233333	NA	Intergenic	Intergenic	179721	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA
27.4666-4	chr22	27787330	27787667	+	0.233333	NA	intron (NM_002430, intron 1 of 1)	intron (NM_002430, intron 1 of 1)	14258	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	MN1 proto-oncogene, transcriptional regulator	protein-coding
34.4333-4	chr11	11212545	11212793	+	0.233333	NA	Intergenic	MIRb|SINE|MIR	140581	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding
36.2667	chr1	190008681	190008931	+	0.233333	NA	Intergenic	L1PB1|LINE|L1	467204	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
33.1334-2	chr14	87643446	87643659	+	0.233333	NA	intron (NR_146551, intron 1 of 2)	intron (NR_146551, intron 1 of 2)	11742	NR_146551	105370611	Hs.691123	NR_146551	ENSG00000258770	LINC02330	-	long intergenic non-protein coding RNA 2330	ncRNA
33.7-14	chr6	53061945	53062193	+	0.233333	NA	promoter-TSS (NM_016513)	promoter-TSS (NM_016513)	-245	NM_014920	22858	Hs.417022	NM_014920	ENSG00000112144	ICK	ECO|EJM10|LCK2|MRK	intestinal cell kinase	protein-coding
33-5	chr22	26812300	26812683	+	0.233333	NA	Intergenic	Intergenic	-47720	NR_146604	110091768	Hs.639900	NR_146604		LOC110091768	-	uncharacterized LOC110091768	ncRNA
44.4999-3	chr3	96184	96426	+	0.233333	NA	Intergenic	Intergenic	84554	NR_110824	102723448	Hs.543290	NR_110824		LINC01986	-	long intergenic non-protein coding RNA 1986	ncRNA
27.1666-4	chrX	10389334	10389638	+	0.233333	NA	Intergenic	MLT1H1|LTR|ERVL-MaLR	178117	NM_001193280	4281	Hs.27695	NM_000381	ENSG00000101871	MID1	BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY	midline 1	protein-coding
35.0666-5	chr9	15521989	15522139	+	0.233333	NA	Intergenic	Intergenic	-11045	NM_001128217	11168	Hs.658434	NM_021144	ENSG00000164985	PSIP1	DFS70|LEDGF|PAIP|PSIP2|p52|p75	PC4 and SFRS1 interacting protein 1	protein-coding
31.9333	chr10	23630041	23630478	+	0.233333	NA	Intergenic	L1M5|LINE|L1	-64468	NM_001098500	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	ETL4|SKT	KIAA1217	protein-coding
42.8333-4	chr9	100053247	100053636	+	0.233333	NA	intron (NM_015051, intron 3 of 11)	Tigger3a|DNA|TcMar-Tigger	45559	NM_015051	23071	Hs.154023	NM_015051	ENSG00000023318	ERP44	PDIA10|TXNDC4	endoplasmic reticulum protein 44	protein-coding
39.0666-5	chrX	111982291	111982581	+	0.233333	NA	intron (NM_012471, intron 1 of 10)	ERVL-B4-int|LTR|ERVL	100340	NM_012471	7224	Hs.657709	NM_012471	ENSG00000072315	TRPC5	PPP1R159|TRP5	transient receptor potential cation channel subfamily C member 5	protein-coding
50.0666-3	chr9	92462690	92463189	+	0.233333	NA	intron (NM_017680, intron 6 of 8)	intron (NM_017680, intron 6 of 8)	19567	NM_001193335	54829	Hs.435655	NM_017680	ENSG00000106819	ASPN	OS3|PLAP-1|PLAP1|SLRR1C	asporin	protein-coding
50.7666-3	chr9	109197301	109197665	+	0.233333	NA	intron (NM_019114, intron 20 of 25)	Charlie22a|DNA|hAT-Charlie	-30192	NM_014334	23732	Hs.347537	NM_014334	ENSG00000260230	FRRS1L	C9orf4|CG-6|CG6|EIEE37	ferric chelate reductase 1 like	protein-coding
46.1-4	chr5	82061042	82061345	+	0.233333	NA	intron (NM_031482, intron 3 of 7)	intron (NM_031482, intron 3 of 7)	89170	NM_031482	83734	Hs.713698	NM_031482	ENSG00000152348	ATG10	APG10|APG10L|pp12616	autophagy related 10	protein-coding
31.5-3	chr1	234782395	234782649	+	0.233333	NA	Intergenic	Intergenic	-22466	NR_148962	100130249	Hs.617350	NR_148962	ENSG00000279261	PP2672	-	uncharacterized LOC100130249	ncRNA
43.9333-6	chr5	85695383	85695698	+	0.233333	NA	Intergenic	L1PREC2|LINE|L1	-586904	NR_003719	285622	Hs.449272	NR_003719		NBPF22P	-	NBPF member 22, pseudogene	pseudo
41.7334	chr14	60159482	60159786	+	0.233333	NA	intron (NM_001322280, intron 1 of 6)	intron (NM_001322280, intron 1 of 6)	5764	NM_016029	51635	Hs.59719	NM_016029	ENSG00000100612	DHRS7	CGI-86|SDR34C1|retDSR4|retSDR4	dehydrogenase/reductase 7	protein-coding
52.7666	chr7	124869800	124870368	+	0.233333	NA	intron (NM_001042594, intron 6 of 17)	L3|LINE|CR1	59741	NM_015450	25913	Hs.31968	NM_015450	ENSG00000128513	POT1	CMM10|GLM9|HPOT1	protection of telomeres 1	protein-coding
21.4666-3	chr5	132906464	132906642	+	0.233333	NA	intron (NM_014423, intron 5 of 20)	L1MB7|LINE|L1	32885	NM_052971	116842	Hs.337588	NM_052971	ENSG00000164406	LEAP2	LEAP-2	liver enriched antimicrobial peptide 2	protein-coding
53.7666	chr1	40926786	40927176	+	0.233333	NA	Intergenic	L2b|LINE|L2	-52715	NR_125440	1503	Hs.473087	NM_001905	ENSG00000171793	CTPS1	CTPS|GATD5|IMD24	CTP synthase 1	protein-coding
46.4999-2	chr14	72456295	72456867	+	0.233333	NA	intron (NM_001370288, intron 4 of 16)	AluJr|SINE|Alu	-60239	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA
67.2666	chr20	450421	450737	+	0.233333	NA	intron (NR_111901, intron 1 of 9)	intron (NR_111901, intron 1 of 9)	11954	NM_144628	128637	Hs.590876	NM_144628	ENSG00000125875	TBC1D20	C20orf140|WARBM4	TBC1 domain family member 20	protein-coding
70.1333-2	chr4	62990651	62991222	+	0.233333	NA	Intergenic	L1MB8|LINE|L1	-829171	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
20.6666-11	chr9	81423321	81423460	+	0.233333	NA	Intergenic	MLT1J2|LTR|ERVL-MaLR	266145	NM_001303103	7088	Hs.197320	NM_005077	ENSG00000196781	TLE1	ESG|ESG1|GRG1	TLE family member 1, transcriptional corepressor	protein-coding
33.4333-7	chr21	44820957	44821195	+	0.233333	NA	Intergenic	L1MEj|LINE|L1	-2947	NM_001286416	6612	Hs.474005	NM_006936	ENSG00000184900	SUMO3	SMT3A|SMT3H1|SUMO-3|Smt3B	small ubiquitin like modifier 3	protein-coding
35.4333-8	chr7	13785969	13786133	+	0.233333	NA	Intergenic	AluY|SINE|Alu	200463	NM_001163150	2115	Hs.22634	NM_004956	ENSG00000006468	ETV1	ER81	ETS variant 1	protein-coding
33.5999-3	chr6	36590436	36590702	+	0.233333	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-3744	NR_036610	6428	Hs.405144	NM_003017	ENSG00000112081	SRSF3	SFRS3|SRp20	serine and arginine rich splicing factor 3	protein-coding
34.4666-3	chr2	149376873	149377051	+	0.233333	NA	intron (NM_194317, intron 1 of 4)	intron (NM_194317, intron 1 of 4)	46375	NM_194317	130574	Hs.21929	NM_194317	ENSG00000187123	LYPD6	-	LY6/PLAUR domain containing 6	protein-coding
35.4333-6	chr4	47407579	47407842	+	0.233333	NA	intron (NM_000812, intron 8 of 8)	L2a|LINE|L2	55992	NM_017845	54951	Hs.23956	NM_017845	ENSG00000169019	COMMD8	-	COMM domain containing 8	protein-coding
73-2	chr7	13479546	13479887	+	0.233333	NA	Intergenic	MER67A|LTR|ERV1	506798	NM_001163150	2115	Hs.22634	NM_004956	ENSG00000006468	ETV1	ER81	ETS variant 1	protein-coding
36.9333-8	chr4	130579307	130579874	+	0.233333	NA	Intergenic	Intergenic	203229	NR_147186	105377420		NR_147186		LINC02479	-	long intergenic non-protein coding RNA 2479	ncRNA
48.7333-2	chr9	30438262	30438660	+	0.233333	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-30007	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
44.9	chr1	222981172	222981420	+	0.233333	NA	intron (NM_001369594, intron 2 of 7)	MIR3|SINE|MIR	52872	NM_001369594	84976	Hs.528817	NM_032890	ENSG00000154309	DISP1	DISPA	dispatched RND transporter family member 1	protein-coding
86-3	chr9	134197318	134197753	+	0.233333	NA	Intergenic	HSMAR2|DNA|TcMar-Mariner	-32971	NR_023344	100151684	Hs.545589	NR_023344	ENSG00000221676	RNU6ATAC	RNU6ATAC1|U6ATAC	RNA, U6atac small nuclear (U12-dependent splicing)	snRNA
61.1666-2	chr8	51335959	51336435	+	0.233333	NA	intron (NM_144651, intron 21 of 22)	intron (NM_144651, intron 21 of 22)	473248	NM_144651	137902	Hs.444882	NM_144651	ENSG00000147485	PXDNL	PMR1|PRM1|VPO2	peroxidasin like	protein-coding
46.8999	chr5	38940994	38941318	+	0.233333	NA	3' UTR (NM_152756, exon 38 of 38)	3' UTR (NM_152756, exon 38 of 38)	95144	NM_001323506	9180	Hs.120658	NM_003999	ENSG00000145623	OSMR	IL-31R-beta|IL-31RB|OSMRB|PLCA1	oncostatin M receptor	protein-coding
37.3999	chr1	70056302	70056494	+	0.233333	NA	intron (NM_001370785, intron 23 of 26)	intron (NM_001370785, intron 23 of 26)	137076	NR_023916	5301	Hs.654711	NR_023916	ENSG00000229359	PIN1P1	PIN1L	peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1	pseudo
46.6999-2	chr2	19367130	19367792	+	0.233333	NA	Intergenic	Intergenic	-8838	NM_145260	130497	Hs.123933	NM_145260	ENSG00000143867	OSR1	ODD	odd-skipped related transcription factor 1	protein-coding
35.7666-2	chr14	56487368	56487586	+	0.233333	NA	Intergenic	Intergenic	-26854	NR_135241	101927690	Hs.385477	NR_135241	ENSG00000258803	LOC101927690	-	uncharacterized LOC101927690	ncRNA
18.0666-2	chr5	64515532	64515676	+	0.233333	NA	intron (NM_001029875, intron 2 of 5)	intron (NM_001029875, intron 2 of 5)	9589	NM_001029875	401190	Hs.657133	NM_001029875	ENSG00000186479	RGS7BP	R7BP	regulator of G protein signaling 7 binding protein	protein-coding
41.1667-2	chr7	122913496	122913758	+	0.233333	NA	Intergenic	MER61B|LTR|ERV1	-26868	NM_001009571	93664	Hs.649459	NM_017954	ENSG00000081803	CADPS2	CAPS2	calcium dependent secretion activator 2	protein-coding
71.5	chr2	123950928	123951526	+	0.233333	NA	Intergenic	L1MA1|LINE|L1	73947	NR_147976	107985820	Hs.637705	NR_147976		LOC107985820	-	uncharacterized LOC107985820	ncRNA
31.0999-2	chr10	89433748	89433924	+	0.233333	NA	intron (NM_213606, intron 7 of 7)	intron (NM_213606, intron 7 of 7)	19268	NM_012420	24138	Hs.252839	NM_012420	ENSG00000152778	IFIT5	ISG58|P58|RI58	interferon induced protein with tetratricopeptide repeats 5	protein-coding
54.2332	chr7	49126019	49126338	+	0.233333	NA	Intergenic	Intergenic	201631	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
46.2-6	chr7	33370879	33371291	+	0.233333	NA	intron (NM_198428, intron 17 of 22)	intron (NM_198428, intron 17 of 22)	241521	NM_001348041	27241	Hs.372360	NM_014451	ENSG00000122507	BBS9	B1|C18|D1|PTHB1	Bardet-Biedl syndrome 9	protein-coding
72.4999	chr1	107603980	107604426	+	0.233333	NA	intron (NM_006113, intron 22 of 26)	intron (NM_006113, intron 22 of 26)	84296	NM_001079874	10451	Hs.267659	NM_006113	ENSG00000134215	VAV3	-	vav guanine nucleotide exchange factor 3	protein-coding
43.3332-2	chr16	22275881	22276164	+	0.233333	NA	intron (NM_013302, intron 16 of 17).2	AluJr|SINE|Alu	-21353	NM_001258035	55718	Hs.460298	NM_018119	ENSG00000058600	POLR3E	RPC5|SIN	RNA polymerase III subunit E	protein-coding
28.2-12	chr2	186809471	186809953	+	0.233333	NA	Intergenic	MER5A1|DNA|hAT-Charlie	39458	NM_182521	151112	Hs.375054	NM_182521	ENSG00000163012	ZSWIM2	MEX|ZZZ2	zinc finger SWIM-type containing 2	protein-coding
38.7333-3	chr15	70141582	70141833	+	0.233333	NA	Intergenic	Intergenic	-43790	NM_001282980	7090	Hs.287362	NM_005078	ENSG00000140332	TLE3	ESG|ESG3|GRG3|HsT18976	TLE family member 3, transcriptional corepressor	protein-coding
43.3-5	chr5	114721942	114722358	+	0.233333	NA	intron (NR_130785, intron 1 of 12)	intron (NR_130785, intron 1 of 12)	51263	NR_130785	101927078	Hs.160027	NR_130785		LOC101927078	-	uncharacterized LOC101927078	ncRNA
50.8333	chr17	10187070	10187468	+	0.233333	NA	intron (NM_201433, intron 1 of 13)	MLT1I|LTR|ERVL-MaLR	11337	NM_201433	8522	Hs.462214	NM_003644	ENSG00000007237	GAS7	-	growth arrest specific 7	protein-coding
21.5666-2	chr5	74189649	74189822	+	0.233333	NA	Intergenic	L1MC1|LINE|L1	118590	NR_105009	102503429	Hs.519391	NR_105009	ENSG00000248942	LINC01335	-	long intergenic non-protein coding RNA 1335	ncRNA
52.0333	chr14	55140178	55140597	+	0.233333	NA	intron (NR_003225, intron 2 of 3)	intron (NR_003225, intron 2 of 3)	3404	NR_003225	3958	Hs.531081	NM_002306	ENSG00000131981	LGALS3	CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2	galectin 3	protein-coding
38.3667-3	chr8	70953387	70953728	+	0.233333	NA	Intergenic	AluJo|SINE|Alu	284218	NM_001011720	389668	Hs.458938	NM_001011720	ENSG00000221947	XKR9	XRG9	XK related 9	protein-coding
30.2-11	chr3	166994021	166994278	+	0.233333	NA	Intergenic	Intergenic	95466	NR_135545	105374194		NR_135545		LOC105374194	inv3q26.1	uncharacterized LOC105374194	ncRNA
53.8333	chr10	52298168	52298595	+	0.233333	NA	TTS (NM_006258)	TTS (NM_006258)	15747	NR_038277	100506939	Hs.584791	NR_038277		PRKG1-AS1	-	PRKG1 antisense RNA 1	ncRNA
51.3666	chr11	111235657	111236213	+	0.233333	NA	Intergenic	L1MD|LINE|L1	-9790	NM_198498	341032	Hs.298685	NM_198498	ENSG00000150750	C11orf53	-	chromosome 11 open reading frame 53	protein-coding
39.8666-2	chr7	50200418	50200790	+	0.233333	NA	Intergenic	MIR|SINE|MIR	-103460	NM_001291839	10320	Hs.435949	NM_006060	ENSG00000185811	IKZF1	CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1	IKAROS family zinc finger 1	protein-coding
58.3999	chr7	146111003	146111462	+	0.233333	NA	Intergenic	Intergenic	-663039	NM_014141	26047	Hs.655684	NM_014141	ENSG00000174469	CNTNAP2	AUTS15|CASPR2|CDFE|NRXN4|PTHSL1	contactin associated protein like 2	protein-coding
48-2	chr10	21790191	21790515	+	0.233333	NA	intron (NM_022365, intron 9 of 11)	L1M2a|LINE|L1	213377	NM_022365	64215	Hs.499000	NM_022365	ENSG00000136770	DNAJC1	DNAJL1|ERdj1|HTJ1|MTJ1	DnaJ heat shock protein family (Hsp40) member C1	protein-coding
41.9666	chr10	88843289	88843611	+	0.233333	NA	intron (NM_144590, intron 1 of 5)	intron (NM_144590, intron 1 of 5)	8394	NM_144590	118932	Hs.217484	NM_144590	ENSG00000152766	ANKRD22	-	ankyrin repeat domain 22	protein-coding
29.7667-5	chr5	146006584	146006769	+	0.233333	NA	intron (NM_152550, intron 4 of 9)	L2b|LINE|L2	70098	NM_152550	153769	Hs.443728	NM_152550	ENSG00000156463	SH3RF2	HEPP1|POSHER|PPP1R39|RNF158	SH3 domain containing ring finger 2	protein-coding
52.2332-2	chr6	98540681	98541140	+	0.233333	NA	Intergenic	Intergenic	290790	NR_148381	105447646	Hs.211213	NR_148381		PNKY	-	long intergenic non-protein coding RNA PNKY	ncRNA
49-5	chr2	55243016	55243381	+	0.233333	NA	intron (NM_001005369, intron 13 of 16)	intron (NM_001005369, intron 13 of 16)	9034	NR_039624	100616345		NR_039624	ENSG00000283795	MIR4426	-	microRNA 4426	ncRNA
32.7-5	chr22	26617723	26617911	+	0.233333	NA	intron (NM_001887, intron 1 of 5)	(TCTC)n|Simple_repeat|Simple_repeat	210	NM_001887	1414	Hs.37135	NM_001887	ENSG00000100122	CRYBB1	CATCN3|CTRCT17	crystallin beta B1	protein-coding
22.7-6	chr5	15246607	15246762	+	0.233333	NA	intron (NR_109944, intron 1 of 2)	L2a|LINE|L2	19876	NR_109944	101929454	Hs.453273	NR_109944		LINC02149	-	long intergenic non-protein coding RNA 2149	ncRNA
63.3999	chr1	187044516	187045039	+	0.233333	NA	Intergenic	Intergenic	-48065	NR_126347	104169671		NR_126347	ENSG00000230426	LINC01036	-	long intergenic non-protein coding RNA 1036	ncRNA
55.5667-3	chr6	74018210	74018484	+	0.233333	NA	Intergenic	L1M1|LINE|L1	-51104	NR_110856	101928516	Hs.384600	NR_110856	ENSG00000223786	LOC101928516	-	uncharacterized LOC101928516	ncRNA
42.4999	chr1	100686725	100687111	+	0.233333	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	-32722	NM_001199834	7412	Hs.109225	NM_001078	ENSG00000162692	VCAM1	CD106|INCAM-100	vascular cell adhesion molecule 1	protein-coding
50.9333-2	chr5	11213970	11214313	+	0.233333	NA	intron (NM_001288715, intron 9 of 20)	intron (NM_001288715, intron 9 of 20)	374776	NM_001288716	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
29.6333-7	chr7	86219806	86220013	+	0.233333	NA	Intergenic	L1PREC2|LINE|L1	-424000	NM_001363522	2913	Hs.590575	NM_000840	ENSG00000198822	GRM3	GLUR3|GPRC1C|MGLUR3|mGlu3	glutamate metabotropic receptor 3	protein-coding
59.8999	chr14	70592159	70592606	+	0.233333	NA	intron (NM_005466, intron 5 of 7)	intron (NM_005466, intron 5 of 7)	8308	NM_005466	10001	Hs.497353	NM_005466	ENSG00000133997	MED6	ARC33|NY-REN-28	mediator complex subunit 6	protein-coding
87.0335	chr5	120777700	120778383	+	0.233333	NA	Intergenic	Intergenic	246577	NM_001308088	51334	Hs.157461	NM_016644	ENSG00000184838	PRR16	DSC54|LARGEN	proline rich 16	protein-coding
49.0666	chr17	52144952	52145269	+	0.233333	NA	intron (NM_001082533, intron 2 of 9)	CR1_Mam|LINE|CR1	13604	NM_020178	56934	Hs.463466	NM_020178	ENSG00000154975	CA10	CA-RPX|CARPX|HUCEP-15	carbonic anhydrase 10	protein-coding
47.7333	chr2	48226201	48226508	+	0.233333	NA	Intergenic	Intergenic	-88328	NM_002158	3344	Hs.468478	NM_002158	ENSG00000170802	FOXN2	HTLF	forkhead box N2	protein-coding
47.3999-2	chr8	126873055	126873419	+	0.233333	NA	Intergenic	Intergenic	-139917	NR_045262	100750225	Hs.571530	NR_045262	ENSG00000253438	PCAT1	PCA1|PCAT-1	prostate cancer associated transcript 1	ncRNA
59.9666-2	chr6	103290124	103290430	+	0.233333	NA	Intergenic	L1MCc|LINE|L1	1569269	NM_001321084	57531	Hs.434340	NM_020771	ENSG00000085382	HACE1	SPPRS	HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1	protein-coding
17.9666	chr18	35248363	35248474	+	0.233333	NA	3' UTR (NM_001135178, exon 4 of 4)	3' UTR (NM_001135178, exon 4 of 4)	7384	NM_001135178	84307	Hs.591061	NM_032347	ENSG00000186812	ZNF397	ZNF47|ZSCAN15	zinc finger protein 397	protein-coding
42-6	chr8	140472369	140472793	+	0.233333	NA	Intergenic	L1ME2z|LINE|L1	-14002	NM_031466	83696	Hs.654911	NM_031466	ENSG00000167632	TRAPPC9	IBP|IKBKBBP|MRT13|NIBP|T1|TRS120	trafficking protein particle complex 9	protein-coding
54.1666	chr7	54913302	54913576	+	0.233333	NA	Intergenic	L1M5|LINE|L1	-105578	NM_001346941	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding
23.9666-3	chr17	60994452	60994558	+	0.233333	NA	intron (NM_001330413, intron 15 of 25)	intron (NM_001330413, intron 15 of 25)	316654	NM_001353144	54828	Hs.655028	NM_017679	ENSG00000141376	BCAS3	GAOB1|MAAB	BCAS3 microtubule associated cell migration factor	protein-coding
40.3-5	chr2	23959521	23959852	+	0.233333	NA	intron (NM_181713, intron 2 of 6)	MER68|LTR|ERVL	19223	NM_181713	165324	Hs.591576	NM_181713	ENSG00000173960	UBXN2A	UBXD4	UBX domain protein 2A	protein-coding
34.6	chr1	85278151	85278579	+	0.233333	NA	TTS (NR_045484)	TTS (NR_045484)	-1733	NM_001320715	8915	Hs.193516	NM_003921	ENSG00000142867	BCL10	CARMEN|CIPER|CLAP|IMD37|c-E10|mE10	BCL10 immune signaling adaptor	protein-coding
63.2-2	chr8	27287370	27287987	+	0.233333	NA	exon (NM_171982, exon 6 of 6)	exon (NM_171982, exon 6 of 6)	23594	NM_001362813	23087	Hs.104223	NM_171982	ENSG00000104228	TRIM35	HLS5|MAIR	tripartite motif containing 35	protein-coding
62.7333	chr10	41897640	41898303	+	0.233333	NA	Intergenic	(AATGG)n|Simple_repeat|Simple_repeat	470074	NR_024380	441666	Hs.255729	NR_024380	ENSG00000215146	LOC441666	-	zinc finger protein 91 pseudogene	pseudo
55.4-2	chr17	17887697	17888192	+	0.233333	NA	intron (NM_001033551, intron 3 of 13)	intron (NM_001033551, intron 3 of 13)	-50933	NM_004176	6720	Hs.592123	NM_004176	ENSG00000072310	SREBF1	SREBP1|bHLHd1	sterol regulatory element binding transcription factor 1	protein-coding
80.2999	chr1	55808511	55808972	+	0.233333	NA	Intergenic	L1M1|LINE|L1	136222	NR_147162	105378739	Hs.98895	NR_147162	ENSG00000230250	LINC01753	-	long intergenic non-protein coding RNA 1753	ncRNA
30-3	chr11	61934081	61934321	+	0.233333	NA	Intergenic	FRAM|SINE|Alu	-13917	NM_001271686	5866	Hs.13759	NM_013401	ENSG00000167994	RAB3IL1	GRAB	RAB3A interacting protein like 1	protein-coding
28.3	chr11	69012652	69012824	+	0.233333	NA	intron (NR_120541, intron 1 of 5)	intron (NR_120541, intron 1 of 5)	384	NR_120541	101928200	Hs.703759	NR_120541	ENSG00000256508	MRGPRF-AS1	-	MRGPRF antisense RNA 1	ncRNA
52.2	chr17	41522506	41522976	+	0.233333	NA	TTS (NM_002276)	TTS (NM_002276)	-3851	NM_002275	3866	Hs.654570	NM_002275	ENSG00000171346	KRT15	CK15|K15|K1CO	keratin 15	protein-coding
51.3333	chr11	39089769	39090213	+	0.233333	NA	Intergenic	Intergenic	441133	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
20.7667-6	chr22	28384644	28384817	+	0.233333	NA	intron (NM_001145418, intron 2 of 22)	intron (NM_001145418, intron 2 of 22)	-75139	NR_106713	102466081		NR_106713	ENSG00000276162	MIR5739	hsa-mir-5739	microRNA 5739	ncRNA
55.6333	chr5	89140673	89141176	+	0.233333	NA	intron (NR_136221, intron 4 of 6)	intron (NR_136221, intron 4 of 6)	-236819	NM_001131005	4208	Hs.649965	NM_002397	ENSG00000081189	MEF2C	C5DELq14.3|DEL5q14.3	myocyte enhancer factor 2C	protein-coding
57.8666-2	chr5	73851785	73852062	+	0.233333	NA	intron (NM_001177693, intron 13 of 35)	intron (NM_001177693, intron 13 of 35)	38377	NM_001244364	64283	Hs.482521	NM_001080479	ENSG00000214944	ARHGEF28	RGNEF|RIP2|p190RHOGEF	Rho guanine nucleotide exchange factor 28	protein-coding
68.4001-2	chr12	53167712	53168239	+	0.233333	NA	intron (NM_001244705, intron 10 of 16)	L1MB8|LINE|L1	-3482	NM_001244706	51380	Hs.279815	NM_015989	ENSG00000139631	CSAD	CSD|PCAP	cysteine sulfinic acid decarboxylase	protein-coding
31.3666	chr1	165443147	165443606	+	0.233333	NA	intron (NR_033824, intron 1 of 1)	intron (NR_033824, intron 1 of 1)	1750	NM_006917	6258	Hs.26550	NM_006917	ENSG00000143171	RXRG	NR2B3|RXRC	retinoid X receptor gamma	protein-coding
25.9667-6	chr2	108287426	108287680	+	0.233333	NA	Intergenic	Intergenic	-1342	NM_001056	6819	Hs.436123	NM_001056	ENSG00000198203	SULT1C2	ST1C1|ST1C2|SULT1C1|humSULTC2	sulfotransferase family 1C member 2	protein-coding
42.1666-2	chr7	134921763	134921989	+	0.233333	NA	intron (NM_033139, intron 1 of 12)	L1ME3G|LINE|L1	30418	NM_033140	800	Hs.490203	NM_004342	ENSG00000122786	CALD1	CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22	caldesmon 1	protein-coding
60.6666	chr20	41063014	41063346	+	0.233333	NA	intron (NM_003286, intron 3 of 20)	L1PA16|LINE|L1	34358	NM_003286	7150	Hs.472737	NM_003286	ENSG00000198900	TOP1	TOPI	DNA topoisomerase I	protein-coding
76.4666	chr4	62920961	62921428	+	0.233333	NA	Intergenic	Intergenic	-759429	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
27.8333-9	chr5	84115807	84115935	+	0.233333	NA	intron (NM_001278642, intron 4 of 9)	OldhAT1|DNA|hAT-Ac	268996	NM_001278642	10085	Hs.482730	NM_005711	ENSG00000164176	EDIL3	DEL1	EGF like repeats and discoidin domains 3	protein-coding
43.3666-3	chr20	5256902	5257256	+	0.233333	NA	Intergenic	L1MD1|LINE|L1	59653	NM_144773	128674	Hs.375029	NM_144773	ENSG00000101292	PROKR2	GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3	prokineticin receptor 2	protein-coding
29.5667-12	chr9	1093125	1093361	+	0.233333	NA	Intergenic	MER49|LTR|ERV1	41756	NR_163472	10655	Hs.59506	NM_006557	ENSG00000173253	DMRT2	-	doublesex and mab-3 related transcription factor 2	protein-coding
53.4-4	chr7	27538283	27538664	+	0.233333	NA	intron (NM_152740, intron 5 of 7)	intron (NM_152740, intron 5 of 7)	-77501	NR_122123	790953	Hs.571330	NR_122122		TSL	-	testis-expressed, seven-twelve, leukemia	ncRNA
50.9333-3	chr8	132491384	132491842	+	0.233333	NA	Intergenic	MIRc|SINE|MIR	-10518	NM_004519	3786	Hs.374023	NM_004519	ENSG00000184156	KCNQ3	BFNC2|EBN2|KV7.3	potassium voltage-gated channel subfamily Q member 3	protein-coding
41.2333-4	chr8	129722029	129722257	+	0.233333	NA	Intergenic	Intergenic	-41904	NR_130917	137196	Hs.679457	NR_130917	ENSG00000229140	CCDC26	RAM	CCDC26 long non-coding RNA	ncRNA
37.0666	chr17	62156650	62156923	+	0.233333	NA	Intergenic	L3|LINE|CR1	-91508	NM_005121	9969	Hs.282678	NM_005121	ENSG00000108510	MED13	ARC250|DRIP250|HSPC221|THRAP1|TRAP240	mediator complex subunit 13	protein-coding
54.6999	chr5	84327640	84328097	+	0.233333	NA	intron (NM_001278642, intron 1 of 9)	intron (NM_001278642, intron 1 of 9)	56999	NM_001278642	10085	Hs.482730	NM_005711	ENSG00000164176	EDIL3	DEL1	EGF like repeats and discoidin domains 3	protein-coding
37.8666	chr13	29080288	29080853	+	0.233333	NA	intron (NM_001366651, intron 4 of 14)	MLT2A2|LTR|ERVL	56113	NM_001033602	23281	Hs.22287	NM_015233	ENSG00000132938	MTUS2	CAZIP|ICIS|KIAA0774|TIP150	microtubule associated scaffold protein 2	protein-coding
42.0667-4	chr16	49394961	49395235	+	0.233333	NA	intron (NM_144602, intron 3 of 4)	AluJo|SINE|Alu	21294	NM_144602	123970	Hs.125875	NM_144602	ENSG00000166152	C16orf78	-	chromosome 16 open reading frame 78	protein-coding
28.2666	chr13	60227332	60227531	+	0.233333	NA	intron (NR_047022, intron 1 of 2)	L1MC4a|LINE|L1	40673	NR_047022	100874169	Hs.171027	NR_047022		LINC00434	-	long intergenic non-protein coding RNA 434	ncRNA
45.6333	chr11	85374408	85374657	+	0.233333	NA	intron (NM_001142699, intron 3 of 27)	AluSx|SINE|Alu	252738	NM_001142699	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
58.5999-2	chr3	117171442	117171909	+	0.233333	NA	Intergenic	L3|LINE|CR1	250244	NR_121607	100506724	Hs.125983	NR_121607	ENSG00000242385	LINC00901	LSAMP-AS4|TCONS_00005428	long intergenic non-protein coding RNA 901	ncRNA
23.1-9	chr2	131134765	131134929	+	0.233333	NA	intron (NM_001267064, intron 6 of 7)	L1MD2|LINE|L1	30000	NM_001100623	55041	Hs.469944	NM_017958	ENSG00000115762	PLEKHB2	EVT2	pleckstrin homology domain containing B2	protein-coding
25.0667-11	chr8	25766331	25766508	+	0.233333	NA	Intergenic	Intergenic	278994	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	EBF transcription factor 2	protein-coding
25.5666-9	chr8	110171014	110171143	+	0.233333	NA	Intergenic	THE1B-int|LTR|ERVL-MaLR	-195307	NM_014379	27012	Hs.13285	NM_014379	ENSG00000164794	KCNV1	HNKA|KCNB3|KV2.3|KV8.1	potassium voltage-gated channel modifier subfamily V member 1	protein-coding
36.2-5	chr2	116789940	116790214	+	0.233333	NA	Intergenic	Intergenic	-1024614	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
38.7-5	chr2	144608464	144608764	+	0.233333	NA	Intergenic	Intergenic	-59353	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41	ncRNA
28.4333-5	chr8	53914177	53914339	+	0.233333	NA	TTS (NR_104578)	TTS (NR_104578)	33386	NR_104579	8601	Hs.368733	NM_003702	ENSG00000147509	RGS20	RGSZ1|ZGAP1|g(z)GAP|gz-GAP	regulator of G protein signaling 20	protein-coding
34.1333-2	chr14	41681714	41681897	+	0.233333	NA	intron (NM_001346173, intron 1 of 4)	AluSz|SINE|Alu	74949	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
36.7666-4	chr9	137125570	137125839	+	0.233333	NA	Intergenic	AluSx|SINE|Alu	-10971	NM_013379	29952	Hs.37916	NM_013379	ENSG00000176978	DPP7	DPP2|DPPII|QPP	dipeptidyl peptidase 7	protein-coding
51.7333-3	chr18	22672955	22673230	+	0.233333	NA	Intergenic	Tigger2a|DNA|TcMar-Tigger	113745	NR_110782	101927571	Hs.335020	NR_110782	ENSG00000266850	LOC101927571	-	uncharacterized LOC101927571	ncRNA
32.3	chr1	105521030	105521340	+	0.233333	NA	Intergenic	MLT1A0-int|LTR|ERVL-MaLR	97750	NR_125954	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
23.7667	chr1	99155838	99156029	+	0.233333	NA	Intergenic	Intergenic	-108359	NM_014839	9890	Hs.13245	NM_014839	ENSG00000117600	PLPPR4	LPPR4|LPR4|PHP1|PRG-1|PRG1	phospholipid phosphatase related 4	protein-coding
70.2999	chr12	64462420	64462964	+	0.233333	NA	intron (NM_013254, intron 3 of 20)	intron (NM_013254, intron 3 of 20)	10572	NM_013254	29110	Hs.505874	NM_013254	ENSG00000183735	TBK1	FTDALS4|IIAE8|NAK|T2K	TANK binding kinase 1	protein-coding
51.1333	chr20	38393441	38393833	+	0.233333	NA	Intergenic	Intergenic	31693	NR_002910	26776	Hs.400876	NR_002910	ENSG00000235408	SNORA71B	RNU71B|U71b	small nucleolar RNA, H/ACA box 71B	snoRNA
46.5999	chr1	237656677	237656890	+	0.233333	NA	intron (NM_001035, intron 53 of 104)	AmnSINE1|SINE|5S-Deu-L2	185664	NR_039626	100616141		NR_039626	ENSG00000266262	MIR4428	-	microRNA 4428	ncRNA
24.5666-6	chr7	49603211	49603491	+	0.233333	NA	Intergenic	L1MC3|LINE|L1	-170287	NM_198570	375567	Hs.629302	NM_198570	ENSG00000188730	VWC2	PSST739|UNQ739	von Willebrand factor C domain containing 2	protein-coding
49.4666-4	chr7	4799672	4800108	+	0.233333	NA	intron (NM_018059, intron 13 of 14)	intron (NM_018059, intron 13 of 14)	-11251	NR_039800	100616465		NR_039800	ENSG00000264474	MIR4656	-	microRNA 4656	ncRNA
50.0999-3	chr5	34601064	34601341	+	0.233333	NA	Intergenic	AluSz6|SINE|Alu	-55126	NM_015577	26064	Hs.431400	NM_015577	ENSG00000039560	RAI14	NORPEG|RAI13	retinoic acid induced 14	protein-coding
28.3333-4	chr14	62981373	62981611	+	0.233333	NA	intron (NM_139318, intron 5 of 10)	MamRTE1|LINE|RTE-BovB	63966	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
61.7667	chr12	11577670	11578161	+	0.233333	NA	Intergenic	Intergenic	29885	NR_033890	338817	Hs.733066	NR_033890	ENSG00000247157	LINC01252	-	long intergenic non-protein coding RNA 1252	ncRNA
24-13	chr4	66994931	66995135	+	0.233333	NA	Intergenic	Intergenic	426967	NR_110747	101927237	Hs.435644	NR_110747	ENSG00000250075	LOC101927237	-	uncharacterized LOC101927237	ncRNA
49.7999-2	chr7	80924968	80925338	+	0.233333	NA	Intergenic	Intergenic	-2764	NM_001350120	10512	Hs.269109	NM_006379	ENSG00000075223	SEMA3C	SEMAE|SemE	semaphorin 3C	protein-coding
36.7666	chr1	217195045	217195249	+	0.233333	NA	Intergenic	Intergenic	-57445	NM_001243511	2104	Hs.444225	NM_001438	ENSG00000196482	ESRRG	ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3	estrogen related receptor gamma	protein-coding
40.6666-4	chr5	54089345	54089599	+	0.233333	NA	intron (NM_019087, intron 4 of 4)	L1ME3D|LINE|L1	-137873	NR_030307	693166		NR_030307	ENSG00000207627	MIR581	MIRN581|hsa-mir-581	microRNA 581	ncRNA
15.4667-9	chr14	73353948	73354036	+	0.233333	NA	intron (NM_001005743, intron 4 of 12)	intron (NM_001005743, intron 4 of 12)	104588	NM_001005744	8650	Hs.525443	NM_003744	ENSG00000133961	NUMB	C14orf41|S171|c14_5527	NUMB endocytic adaptor protein	protein-coding
78.1	chr10	100168354	100168727	+	0.233333	NA	intron (NR_144757, intron 5 of 10)	intron (NR_144757, intron 5 of 10)	17489	NR_144756	10613	Hs.150087	NM_006459	ENSG00000107566	ERLIN1	C10orf69|Erlin-1|KE04|KEO4|SPFH1|SPG62	ER lipid raft associated 1	protein-coding
81.6	chr11	37080925	37081486	+	0.233333	NA	Intergenic	Intergenic	-482926	NM_001243786	5897	Hs.714519	NM_000536	ENSG00000175097	RAG2	RAG-2	recombination activating 2	protein-coding
54.9-4	chr6	11481819	11482344	+	0.233333	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-55668	NM_001100829	100113407	Hs.146317	NM_001100829	ENSG00000205269	TMEM170B	-	transmembrane protein 170B	protein-coding
42.9333	chr1	219505447	219505906	+	0.233333	NA	intron (NR_135822, intron 1 of 3)	intron (NR_135822, intron 1 of 3)	51648	NR_135822	102723886	Hs.525963	NR_135822		LYPLAL1-AS1	-	LYPLAL1 antisense RNA 1	ncRNA
36.0333-6	chr8	92128137	92128472	+	0.233333	NA	Intergenic	Intergenic	-24919	NM_175634	862	Hs.368431	NM_004349	ENSG00000079102	RUNX1T1	AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2	RUNX1 partner transcriptional co-repressor 1	protein-coding
72.3667	chr20	44819099	44819702	+	0.233333	NA	Intergenic	L1ME4b|LINE|L1	-8854	NM_001205317	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding
108.733	chrX	85870920	85871666	+	0.233333	NA	intron (NM_001320959, intron 14 of 14)	AluY|SINE|Alu	32414	NR_029848	494323		NR_029848	ENSG00000199051	MIR361	MIRN361|hsa-mir-361|mir-361	microRNA 361	ncRNA
38.9	chr11	11589833	11590134	+	0.233333	NA	intron (NM_001363464, intron 1 of 9)	MIRb|SINE|MIR	32022	NM_001363464	374378	Hs.655152	NM_198516	ENSG00000110328	GALNT18	GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18	polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
32.1666	chr3	107194084	107194332	+	0.233333	NA	intron (NR_028303, intron 1 of 3)	intron (NR_028303, intron 1 of 3)	46430	NR_028303	100302640	Hs.648607	NR_028303	ENSG00000242759	LINC00882	-	long intergenic non-protein coding RNA 882	ncRNA
30.3334-2	chr4	113965871	113966039	+	0.233333	NA	intron (NM_001354211, intron 4 of 6)	intron (NM_001354211, intron 4 of 6)	13692	NM_001354210	79642	Hs.22895	NM_024590	ENSG00000180801	ARSJ	ASJ	arylsulfatase family member J	protein-coding
35.4-5	chr2	174101888	174102117	+	0.233333	NA	intron (NM_001011708, intron 6 of 9)	intron (NM_001011708, intron 6 of 9)	76722	NR_136175	100128905	Hs.456944	NR_136175	ENSG00000260868	LINC01960	-	long intergenic non-protein coding RNA 1960	ncRNA
44.5333-8	chr8	125194006	125194341	+	0.233333	NA	intron (NM_001349486, intron 5 of 7)	intron (NM_001349486, intron 5 of 7)	102313	NM_173685	286053	Hs.388297	NM_173685	ENSG00000156831	NSMCE2	C8orf36|MMS21|NSE2|ZMIZ7	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase	protein-coding
29.4999-2	chr5	8553289	8553523	+	0.233333	NA	Intergenic	Intergenic	92481	NR_039663	100616142		NR_039663	ENSG00000284000	MIR4458	mir-4458	microRNA 4458	ncRNA
38.7333-10	chr6	15700556	15700855	+	0.233333	NA	Intergenic	Intergenic	-37647	NM_032122	84062	Hs.571148	NM_032122	ENSG00000047579	DTNBP1	BLOC1S8|DBND|HPS7|My031|SDY	dystrobrevin binding protein 1	protein-coding
54.1333	chr2	62113710	62114143	+	0.233333	NA	intron (NM_001321781, intron 2 of 2)	intron (NM_001321781, intron 2 of 2)	-82189	NM_006577	10678	Hs.173203	NM_006577	ENSG00000170340	B3GNT2	3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
43.7667-2	chr8	49075935	49076167	+	0.233333	NA	TTS (NM_001256596)	TTS (NM_001256596)	3707	NM_001007176	492307	Hs.49890	NM_001007176	ENSG00000168333	PPDPFL	C8orf22	pancreatic progenitor cell differentiation and proliferation factor like	protein-coding
15.9666	chr17	33978152	33978220	+	0.233333	NA	intron (NM_001094, intron 1 of 9)	intron (NM_001094, intron 1 of 9)	178620	NM_001094	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding
61.1666	chr6	35077753	35078323	+	0.233333	NA	intron (NM_015245, intron 13 of 23)	intron (NM_015245, intron 13 of 23)	63301	NM_001366330	6954	Hs.435371	NM_018679	ENSG00000124678	TCP11	D6S230E|FPPR	t-complex 11	protein-coding
40.3666	chr5	18019745	18019965	+	0.233333	NA	Intergenic	Intergenic	212581	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
66.2333-2	chr2	237567795	237568119	+	0.233333	NA	TTS (NM_015893)	TTS (NM_015893)	1383	NM_015893	51052	Hs.247710	NM_015893	ENSG00000071677	PRLH	PRH|PRRP	prolactin releasing hormone	protein-coding
25.7-12	chr6	51785393	51785611	+	0.233333	NA	intron (NM_138694, intron 53 of 66)	intron (NM_138694, intron 53 of 66)	163632	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
26.7-9	chr5	26696600	26696823	+	0.233333	NA	Intergenic	L1MA6|LINE|L1	341875	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
39.3666	chr2	53738389	53738820	+	0.233333	NA	intron (NM_001201965, intron 2 of 8)	intron (NM_001201965, intron 2 of 8)	-29179	NM_001346127	494143	Hs.585944	NM_001008708	ENSG00000143942	CHAC2	GCG1	ChaC cation transport regulator homolog 2	protein-coding
24.6333-13	chr8	123049315	123049480	+	0.233333	NA	Intergenic	Intergenic	-6974	NM_001330601	79139	Hs.241576	NM_024295	ENSG00000136986	DERL1	DER-1|DER1|derlin-1	derlin 1	protein-coding
25.6666-6	chr5	164911528	164911667	+	0.233333	NA	Intergenic	Intergenic	441318	NR_105065	102546299	Hs.437730	NR_105065	ENSG00000241956	LOC102546299	-	uncharacterized LOC102546299	ncRNA
60.3999-2	chr3	103958672	103959016	+	0.233333	NA	Intergenic	Intergenic	-434728	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
38.1333-3	chr2	53515059	53515274	+	0.233333	NA	Intergenic	Intergenic	-252617	NM_001346127	494143	Hs.585944	NM_001008708	ENSG00000143942	CHAC2	GCG1	ChaC cation transport regulator homolog 2	protein-coding
35.8-4	chr20	6335817	6336065	+	0.233333	NA	Intergenic	Intergenic	-90791	NR_109953	101929244	Hs.542488	NR_109953	ENSG00000229876	CASC20	-	cancer susceptibility 20	ncRNA
67.1333-2	chr9	69057761	69058413	+	0.233333	NA	intron (NM_000144, intron 3 of 4)	intron (NM_000144, intron 3 of 4)	22335	NM_181425	2395	Hs.20685	NM_000144	ENSG00000165060	FXN	CyaY|FA|FARR|FRDA|X25	frataxin	protein-coding
55.5667	chr12	57388913	57389203	+	0.233333	NA	intron (NM_001351217, intron 1 of 21)	intron (NM_001351217, intron 1 of 21)	41985	NM_001351217	22864	Hs.443673	NM_014925	ENSG00000179912	R3HDM2	CAG6|PR01365	R3H domain containing 2	protein-coding
58.0334-2	chr22	27855188	27855504	+	0.233333	NA	intron (NM_001284278, intron 10 of 11)	intron (NM_001284278, intron 10 of 11)	-53590	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	MN1 proto-oncogene, transcriptional regulator	protein-coding
35.8666-5	chr18	10542501	10542666	+	0.233333	NA	intron (NM_003826, intron 8 of 11)	intron (NM_003826, intron 8 of 11)	16556	NM_003826	8774	Hs.464622	NM_003826	ENSG00000134265	NAPG	GAMMASNAP	NSF attachment protein gamma	protein-coding
28.7333-2	chr1	92070920	92071048	+	0.233333	NA	Intergenic	MLT2D|LTR|ERVL	4488	NM_001287737	646817		NM_001287737	ENSG00000230667	SETSIP	SETP18	SET like protein	protein-coding
43.5999	chr1	184883310	184883567	+	0.233333	NA	intron (NM_052966, intron 5 of 13)	L2b|LINE|L2	91070	NM_052966	116496	Hs.518662	NM_052966	ENSG00000135842	NIBAN1	C1orf24|FAM129A|GIG39|NIBAN	niban apoptosis regulator 1	protein-coding
59.6666	chr11	26267541	26267978	+	0.233333	NA	intron (NM_001313726, intron 1 of 27)	intron (NM_001313726, intron 1 of 27)	20248	NR_132968	105376599	Hs.125537	NR_132968	ENSG00000254819	ANO3-AS1	-	ANO3 antisense RNA 1	ncRNA
73.6666-2	chr8	117593639	117594106	+	0.233333	NA	Intergenic	Intergenic	73159	NM_080651	90390	Hs.492612	NM_080651	ENSG00000164758	MED30	MED30S|THRAP6|TRAP25	mediator complex subunit 30	protein-coding
14.9-14	chr9	15919084	15919147	+	0.233333	NA	intron (NM_001355547, intron 23 of 24)	L2c|LINE|L2	333992	NM_001271829	100129385	Hs.586441	NM_001271829	ENSG00000205549	C9orf92	Em:AL513424.1	chromosome 9 open reading frame 92	protein-coding
29.8-5	chr2	62877817	62878021	+	0.233333	NA	intron (NM_001142615, intron 10 of 22)	L1PA15|LINE|L1	169792	NR_027069	100132215	Hs.656781	NR_027069	ENSG00000231609	LOC100132215	-	uncharacterized LOC100132215	ncRNA
56.1	chr13	80159962	80160426	+	0.233333	NA	Intergenic	Intergenic	149117	NR_104138	101515984	Hs.569290	NR_104138		LINC01080	TCONS_00021856	long intergenic non-protein coding RNA 1080	ncRNA
61.0999	chr2	74274979	74275382	+	0.233333	NA	intron (NM_133478, intron 8 of 30)	intron (NM_133478, intron 8 of 30)	39845	NM_021196	57835	Hs.594099	NM_021196	ENSG00000188687	SLC4A5	NBC4|NBCe2	solute carrier family 4 member 5	protein-coding
36.0334	chr10	33312527	33312817	+	0.233333	NA	intron (NM_001244973, intron 2 of 16)	intron (NM_001244973, intron 2 of 16)	21995	NM_003873	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding
33.8333-4	chr15	65344870	65345135	+	0.233333	NA	intron (NM_004884, intron 2 of 13)	intron (NM_004884, intron 2 of 13)	33000	NM_004884	9543	Hs.128292	NM_004884	ENSG00000174498	IGDCC3	HsT18880|PUNC	immunoglobulin superfamily DCC subclass member 3	protein-coding
55.9	chr22	20255905	20256311	+	0.233333	NA	intron (NM_023004, intron 1 of 1)	intron (NM_023004, intron 1 of 1)	-6897	NR_031618	100302118		NR_031618	ENSG00000221039	MIR1286	MIRN1286|hsa-mir-1286|mir-1286	microRNA 1286	ncRNA
45.5333-3	chr14	48218626	48219124	+	0.233333	NA	Intergenic	Intergenic	-423861	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
29.4999	chr1	234959819	234960053	+	0.233333	NA	intron (NR_125945, intron 1 of 3)	intron (NR_125945, intron 1 of 3)	4063	NR_125945	101927851	Hs.520684	NR_125945	ENSG00000238005	LOC101927851	-	uncharacterized LOC101927851	ncRNA
31.1-8	chr2	126172652	126172832	+	0.233333	NA	Intergenic	Intergenic	-54757	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
31.3333-6	chr22	29919803	29920049	+	0.233333	NA	intron (NM_153051, intron 1 of 18)	intron (NM_153051, intron 1 of 18)	36752	NM_153051	8897	Hs.474536	NM_021090	ENSG00000100330	MTMR3	FYVE-DSP1|ZFYVE10	myotubularin related protein 3	protein-coding
41.1-4	chr8	137913892	137914431	+	0.233333	NA	intron (NR_161374, intron 2 of 7)	THE1B|LTR|ERVL-MaLR	169384	NR_161374	401478	Hs.654931	NM_001354876		LOC401478	-	uncharacterized LOC401478	ncRNA
64.2333-3	chr8	129443627	129444168	+	0.233333	NA	intron (NR_130920, intron 1 of 3)	intron (NR_130920, intron 1 of 3)	40245	NR_037457	100500839		NR_037457	ENSG00000263763	MIR3686	-	microRNA 3686	ncRNA
52.8666-2	chr7	90239828	90240237	+	0.233333	NA	Intergenic	AluJb|SINE|Alu	-5142	NM_001039706	79846	Hs.521014	NM_024788	ENSG00000105792	CFAP69	C7orf63|FAP69|SPGF24	cilia and flagella associated protein 69	protein-coding
44.9333-2	chr19	43887284	43887622	+	0.233333	NA	Intergenic	L1MEg|LINE|L1	-7317	NM_001033719	342908	Hs.76561	NM_001033719	ENSG00000176222	ZNF404	-	zinc finger protein 404	protein-coding
58.0666-2	chr6	114844195	114844532	+	0.233333	NA	Intergenic	L1PA16|LINE|L1	-781486	NM_153612	222537	Hs.645477	NM_153612	ENSG00000249853	HS3ST5	3-OST-5|3OST5|HS3OST5|NBLA04021	heparan sulfate-glucosamine 3-sulfotransferase 5	protein-coding
43.3667	chr14	72417216	72417772	+	0.233333	NA	intron (NM_001370288, intron 3 of 16)	intron (NM_001370288, intron 3 of 16)	-99326	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA
35.4667-3	chr10	61797221	61797577	+	0.233333	NA	Intergenic	Intergenic	-104300	NM_032199	84159	Hs.535297	NM_032199	ENSG00000150347	ARID5B	DESRT|MRF-2|MRF2	AT-rich interaction domain 5B	protein-coding
56.7333	chr12	45602948	45603235	+	0.233333	NA	Intergenic	L3|LINE|CR1	124830	NR_028408	400027	Hs.597122	NR_028408		LINC00938	-	long intergenic non-protein coding RNA 938	ncRNA
26.2333-9	chr2	196398220	196398418	+	0.233333	NA	intron (NM_020760, intron 2 of 28)	intron (NM_020760, intron 2 of 28)	-36142	NM_001304840	57520	Hs.633212	NM_020760	ENSG00000138411	HECW2	NDHSAL|NEDL2	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	protein-coding
38.6334	chr8	73182861	73183145	+	0.233333	NA	Intergenic	L1MC4|LINE|L1	76499	NM_001243237	100130301	Hs.202296	NM_001243237	ENSG00000274443	C8orf89	-	chromosome 8 open reading frame 89	protein-coding
46.0333	chr7	112983171	112983649	+	0.233333	NA	intron (NR_110162, intron 2 of 5)	AluSq|SINE|Alu	12233	NR_110162	101928036	Hs.120006	NR_110162	ENSG00000234520	HRAT17	-	heart tissue-associated transcript 17	ncRNA
28.4666-2	chr16	73295478	73295608	+	0.233333	NA	Intergenic	Intergenic	-91262	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA
53.3666	chr4	30881643	30881973	+	0.233333	NA	intron (NM_032457, intron 1 of 2)	intron (NM_032457, intron 1 of 2)	161439	NM_032456	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
26.9-9	chr2	25617444	25617569	+	0.233333	NA	intron (NM_033147, intron 4 of 19)	intron (NM_033147, intron 4 of 19)	32716	NM_001256308	1838	Hs.307720	NM_021907	ENSG00000138101	DTNB	-	dystrobrevin beta	protein-coding
27.8333-5	chr3	28231804	28231999	+	0.233333	NA	Intergenic	Intergenic	-9718	NM_182523	152100	Hs.444724	NM_182523	ENSG00000187118	CMC1	C3orf68	C-X9-C motif containing 1	protein-coding
29.7667-3	chr15	85669422	85669568	+	0.233333	NA	intron (NM_007200, intron 13 of 36)	MIRb|SINE|MIR	49545	NM_001270546	11214	Hs.459211	NM_006738	ENSG00000170776	AKAP13	AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47	A-kinase anchoring protein 13	protein-coding
47.3666	chr12	12388676	12389035	+	0.233333	NA	intron (NM_001300742, intron 2 of 3).2	intron (NM_001300742, intron 2 of 3).2	31777	NM_001300742	118426	Hs.504805	NM_058169	ENSG00000165714	BORCS5	LOH12CR1|LOH1CR12	BLOC-1 related complex subunit 5	protein-coding
36.1-6	chr8	77396176	77396473	+	0.233333	NA	Intergenic	Intergenic	-54373	NR_125830	102724874	Hs.571511	NR_125830		LOC102724874	-	uncharacterized LOC102724874	ncRNA
38.2333-5	chr5	35764427	35764676	+	0.233333	NA	intron (NM_024867, intron 26 of 36)	intron (NM_024867, intron 26 of 36)	-92340	NM_002185	3575	Hs.591742	NM_002185	ENSG00000168685	IL7R	CD127|CDW127|IL-7R-alpha|IL7RA|ILRA	interleukin 7 receptor	protein-coding
44.2-2	chr14	39640965	39641206	+	0.233333	NA	Intergenic	Intergenic	-208585	NM_203301	254170	Hs.146632	NM_203301	ENSG00000165355	FBXO33	BMND12|Fbx33|c14_5247	F-box protein 33	protein-coding
48.2999	chr2	60389933	60390184	+	0.233333	NA	intron (NR_132992, intron 1 of 1)	intron (NR_132992, intron 1 of 1)	1317	NR_132992	106660609	Hs.565545	NR_132991	ENSG00000228590	MIR4432HG	-	MIR4432 host gene	ncRNA
27.7-16	chr8	122634325	122634487	+	0.233333	NA	Intergenic	Intergenic	59700	NR_126348	104266958	Hs.575540	NR_126348	ENSG00000253819	LINC01151	-	long intergenic non-protein coding RNA 1151	ncRNA
48.5333-8	chrX	57396668	57397012	+	0.233333	NA	intron (NM_001353840, intron 7 of 9)	L1PB4|LINE|L1	109986	NR_148564	158584	Hs.496205	NM_174912	ENSG00000165591	FAAH2	AMDD	fatty acid amide hydrolase 2	protein-coding
32.4-12	chr5	10862077	10862367	+	0.233333	NA	Intergenic	Intergenic	-100988	NM_001291963	1611	Hs.75189	NM_004394	ENSG00000112977	DAP	-	death associated protein	protein-coding
46.9666	chr2	192486824	192487088	+	0.233333	NA	Intergenic	L1M3|LINE|L1	-262889	NR_002769	64002	Hs.546994	NR_002769	ENSG00000227418	PCGEM1	LINC00071|NCRNA00071|PCAT9	PCGEM1 prostate-specific transcript	ncRNA
35.3-5	chr4	30018623	30018823	+	0.233333	NA	Intergenic	Intergenic	-701646	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
41.2999-2	chr16	85121946	85122254	+	0.233333	NA	Intergenic	AluSx1|SINE|Alu	-9628	NM_198491	339145	Hs.125713	NM_198491	ENSG00000153789	FAM92B	-	family with sequence similarity 92 member B	protein-coding
40.1333-6	chr5	12498117	12498325	+	0.233333	NA	Intergenic	Intergenic	-76636	NR_033383	404663	Hs.552273	NR_033383		LINC01194	CT49|TAG	long intergenic non-protein coding RNA 1194	ncRNA
32.4-5	chr2	114439539	114439807	+	0.233333	NA	Intergenic	Intergenic	-2968	NM_001321910	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
31.2-7	chr12	102466978	102467378	+	0.233333	NA	intron (NM_000618, intron 2 of 3)	intron (NM_000618, intron 2 of 3)	11372	NM_001111284	3479	Hs.160562	NM_000618	ENSG00000017427	IGF1	IGF|IGF-I|IGFI|MGF	insulin like growth factor 1	protein-coding
33.7667-5	chr15	93501622	93501863	+	0.233333	NA	Intergenic	Intergenic	295676	NM_001365393	105370980		NM_001365393		LOC105370980	-	putative uncharacterized protein UNQ9370/PRO34162	protein-coding
54.5333-5	chr6	148981443	148981735	+	0.233333	NA	intron (NM_005715, intron 5 of 7)	L2a|LINE|L2	-16905	NR_038408	100128176	Hs.557541	NR_038408		UST-AS1	-	UST antisense RNA 1	ncRNA
28.5667-6	chr17	57984993	57985165	+	0.233333	NA	intron (NM_007146, intron 1 of 5)	intron (NM_007146, intron 1 of 5)	3175	NM_001330393	7716	Hs.463569	NM_007146	ENSG00000136451	VEZF1	DB1|ZNF161	vascular endothelial zinc finger 1	protein-coding
50.4333	chr15	86097621	86098074	+	0.233333	NA	intron (NR_120368, intron 3 of 5)	L1MA4A|LINE|L1	18227	NM_152336	123624	Hs.31795	NM_152336	ENSG00000273540	AGBL1	CCP4|FECD8	ATP/GTP binding protein like 1	protein-coding
45.4667-4	chr20	46950913	46951292	+	0.233333	NA	intron (NM_172110, intron 1 of 13)	LTR16C|LTR|ERVL	56259	NM_005244	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding
19.3-11	chr5	20238073	20238161	+	0.233333	NA	intron (NM_001291956, intron 2 of 14)	L1MEc|LINE|L1	-67434	NR_146519	102725105		NR_146519		CDH18-AS1	-	CDH18 antisense RNA 1	ncRNA
48.9333	chr3	10524484	10524777	+	0.233333	NA	intron (NM_001353564, intron 2 of 20)	intron (NM_001353564, intron 2 of 20)	-19044	NM_001683	491	Hs.268942	NM_001683	ENSG00000157087	ATP2B2	PMCA2|PMCA2a|PMCA2i	ATPase plasma membrane Ca2+ transporting 2	protein-coding
37.4666-4	chr7	104684710	104685001	+	0.233333	NA	intron (NM_199000, intron 1 of 2)	intron (NM_199000, intron 1 of 2)	119237	NR_034142	645591	Hs.658835	NR_034141	ENSG00000226869	LHFPL3-AS1	-	LHFPL3 antisense RNA 1	ncRNA
44.2667	chr10	92900438	92900810	+	0.233333	NA	intron (NM_001319195, intron 5 of 21)	HAL1|LINE|L1	52104	NM_019053	54536	Hs.655657	NM_019053	ENSG00000138190	EXOC6	EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p	exocyst complex component 6	protein-coding
40.6334-3	chr12	65411035	65411303	+	0.233333	NA	intron (NM_001031679, intron 5 of 6)	intron (NM_001031679, intron 5 of 6)	132182	NM_001193461	253827	Hs.339024	NM_198080	ENSG00000174099	MSRB3	DFNB74	methionine sulfoxide reductase B3	protein-coding
52	chr1	12296590	12296924	+	0.233333	NA	intron (NM_015378, intron 24 of 69)	L1ME4b|LINE|L1	66727	NM_018156	55187	Hs.439381	NM_015378	ENSG00000048707	VPS13D	SCAR4	vacuolar protein sorting 13 homolog D	protein-coding
54.2-2	chr1	119778275	119778620	+	0.233333	NA	Intergenic	Intergenic	-9515	NM_005518	3158	Hs.59889	NM_005518	ENSG00000134240	HMGCS2	-	3-hydroxy-3-methylglutaryl-CoA synthase 2	protein-coding
61.4-2	chr2	134008865	134009361	+	0.233333	NA	Intergenic	L1ME4a|LINE|L1	-110822	NM_001371457								
52.7-3	chr4	72342691	72342961	+	0.233333	NA	intron (NM_014243, intron 4 of 21)	LTR8B|LTR|ERV1	226395	NM_014243	9508	Hs.590919	NM_014243	ENSG00000156140	ADAMTS3	ADAMTS-4|HKLLS3	ADAM metallopeptidase with thrombospondin type 1 motif 3	protein-coding
41.5333-8	chr5	135047207	135047519	+	0.233333	NA	intron (NR_161235, intron 1 of 5)	intron (NR_161235, intron 1 of 5)	-7316	NR_105050	101927953	Hs.436898	NR_105049	ENSG00000249082	C5orf66-AS1	Epist	C5orf66 antisense RNA 1	ncRNA
59.1666	chr17	65921684	65922012	+	0.233333	NA	intron (NM_001353129, intron 19 of 26)	intron (NM_001353129, intron 19 of 26)	-95305	NR_126542	201134	Hs.408676	NM_145036	ENSG00000154240	CEP112	CCDC46|MACOCO	centrosomal protein 112	protein-coding
45.3666-2	chr7	25073212	25073590	+	0.233333	NA	Intergenic	Intergenic	51960	NM_018947	54205	Hs.437060	NM_018947	ENSG00000172115	CYCS	CYC|HCS|THC4	cytochrome c, somatic	protein-coding
54.7666-2	chr5	6492398	6493017	+	0.233333	NA	3' UTR (NM_001145161, exon 2 of 2)	3' UTR (NM_001145161, exon 2 of 2)	43848	NM_001145161	134111	Hs.126856	NM_001145161	ENSG00000215218	UBE2QL1	-	ubiquitin conjugating enzyme E2 Q family like 1	protein-coding
53	chr6	133793962	133794288	+	0.233333	NA	intron (NR_109982, intron 2 of 8)	L1PREC2|LINE|L1	-27022	NR_027030	154089	Hs.126165	NR_027030		LINC01312	-	long intergenic non-protein coding RNA 1312	ncRNA
41.6-8	chr2	187721851	187722362	+	0.233333	NA	Intergenic	L1PA14|LINE|L1	-167601	NM_001032281	7035	Hs.516578	NM_006287	ENSG00000003436	TFPI	EPI|LACI|TFI|TFPI1	tissue factor pathway inhibitor	protein-coding
59.2666	chr6	49266253	49266892	+	0.233333	NA	Intergenic	Intergenic	196681	NM_000255	4594	Hs.485527	NM_000255	ENSG00000146085	MMUT	MCM|MUT	methylmalonyl-CoA mutase	protein-coding
47.6666-3	chr15	62907079	62907465	+	0.233333	NA	Intergenic	Intergenic	83315	NR_029709	406965		NR_029709	ENSG00000211137	MIR190A	MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a	microRNA 190a	ncRNA
38.4	chr11	9767545	9767757	+	0.233333	NA	intron (NR_036485, intron 1 of 2)	intron (NR_036485, intron 1 of 2)	-8118	NR_033972	440028	Hs.677541	NR_033972	ENSG00000245522	LINC02709	-	long intergenic non-protein coding RNA 2709	ncRNA
35.5334-2	chr5	62272858	62273082	+	0.233333	NA	Intergenic	Intergenic	-33192	NM_001243952	3796	Hs.558351	NM_004520	ENSG00000068796	KIF2A	CDCBM3|HK2|KIF2	kinesin family member 2A	protein-coding
25.5-3	chr20	60798997	60799180	+	0.233333	NA	Intergenic	Intergenic	234526	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA
43.1333-6	chr7	44972001	44972460	+	0.233333	NA	intron (NM_033054, intron 5 of 21)	intron (NM_033054, intron 5 of 21)	6785	NM_033054	64005	Hs.37617	NM_033054	ENSG00000136286	MYO1G	HA2|HLA-HA2|MHAG	myosin IG	protein-coding
43.9	chr14	67495214	67495871	+	0.233333	NA	intron (NM_001348546, intron 1 of 2)	AluSq2|SINE|Alu	-6821	NM_001348543	161145	Hs.509707	NM_182526	ENSG00000198133	TMEM229B	C14orf83	transmembrane protein 229B	protein-coding
13.5333-7	chr16	64397321	64397399	+	0.233333	NA	Intergenic	Intergenic	724703	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
43.3333	chr11	22322959	22323184	+	0.233333	NA	Intergenic	Intergenic	-15310	NM_020346	57084	Hs.242821	NM_020346	ENSG00000091664	SLC17A6	DNPI|VGLUT2	solute carrier family 17 member 6	protein-coding
63.1668	chr14	86523089	86523503	+	0.233333	NA	Intergenic	Intergenic	-382482	NR_038445	283585	Hs.381998	NR_038445	ENSG00000258804	LINC01148	-	long intergenic non-protein coding RNA 1148	ncRNA
29.2	chr1	164446840	164447289	+	0.233333	NA	Intergenic	Intergenic	-112296	NM_001353131	5087	Hs.557097	NM_002585	ENSG00000185630	PBX1	CAKUHED	PBX homeobox 1	protein-coding
45.3666	chr5	127070785	127071115	+	0.233333	NA	intron (NM_001164479, intron 2 of 4)	MamTip3|DNA|hAT-Tip100	2542	NM_001164479	401207	Hs.49573	NM_001164478	ENSG00000164241	C5orf63	YDR286C	chromosome 5 open reading frame 63	protein-coding
59.2333	chr4	65108588	65109089	+	0.233333	NA	Intergenic	Intergenic	-104338	NR_033976	401134	Hs.165899	NR_033976	ENSG00000250125	LINC02232	-	long intergenic non-protein coding RNA 2232	ncRNA
47.8333	chr18	40736268	40736593	+	0.233333	NA	Intergenic	Intergenic	670144	NR_110791	101927900	Hs.385522	NR_110791	ENSG00000261715	LINC01477	-	long intergenic non-protein coding RNA 1477	ncRNA
45.7333-4	chr16	76955521	76955823	+	0.233333	NA	Intergenic	MIRb|SINE|MIR	86736	NR_039870	100616172		NR_039870	ENSG00000266426	MIR4719	-	microRNA 4719	ncRNA
20.7334-3	chr15	72983878	72984085	+	0.233333	NA	Intergenic	MLT1D-int|LTR|ERVL-MaLR	-68482	NM_002499	4756	Hs.388613	NM_002499	ENSG00000067141	NEO1	IGDCC2|NGN|NTN1R2	neogenin 1	protein-coding
72.1332	chr8	78736708	78737083	+	0.233333	NA	intron (NM_001199886, intron 3 of 4)	intron (NM_001199886, intron 3 of 4)	-12521	NR_077236	101241902	Hs.388511	NR_077236		LOC101241902	-	chromosome 4 open reading frame 46 pseudogene	pseudo
66.4999	chr12	14820479	14820929	+	0.233333	NA	intron (NM_175874, intron 1 of 1)	intron (NM_175874, intron 1 of 1)	-6522	NM_001013698	440087	Hs.220931	NM_001013698	ENSG00000179256	SMCO3	C12orf69	single-pass membrane protein with coiled-coil domains 3	protein-coding
41.7999-4	chr20	42367379	42367756	+	0.233333	NA	intron (NM_133170, intron 9 of 31)	L2a|LINE|L2	-317916	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA
40.3-4	chr15	69739999	69740514	+	0.233333	NA	Intergenic	Intergenic	-94978	NR_026764	414926	Hs.569502	NR_026764	ENSG00000245750	LINC00593	C15orf50	long intergenic non-protein coding RNA 593	ncRNA
61.6666-2	chr2	147239637	147240076	+	0.233333	NA	Intergenic	L1ME2z|LINE|L1	-604661	NM_001278579	92	Hs.470174	NM_001616	ENSG00000121989	ACVR2A	ACTRII|ACVR2	activin A receptor type 2A	protein-coding
23.7667-8	chr2	38846047	38846319	+	0.233333	NA	intron (NM_001329963, intron 11 of 23)	MIR|SINE|MIR	29751	NM_001329963	90957	Hs.468226	NM_198963	ENSG00000163214	DHX57	DDX57	DExH-box helicase 57	protein-coding
22.2667-6	chr20	31053560	31053814	+	0.233333	NA	Intergenic	(TGGAA)n|Simple_repeat|Simple_repeat	-203977	NM_001037730	245929	Hs.580793	NM_001037730	ENSG00000215547	DEFB115	DEFB-15	defensin beta 115	protein-coding
55.2333	chr3	135087984	135088383	+	0.233333	NA	intron (NM_004441, intron 3 of 15)	intron (NM_004441, intron 3 of 15)	292923	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding
40.4999	chr2	184173244	184173618	+	0.233333	NA	Intergenic	L1ME3G|LINE|L1	-205544	NR_039638	100616305		NR_039638	ENSG00000266808	MIR548AE1	-	microRNA 548ae-1	ncRNA
36.4-8	chr3	116655243	116655530	+	0.233333	NA	Intergenic	Intergenic	-54402	NR_015391	285194	Hs.120364	NR_015391		TUSC7	LINC00902|LSAMP-AS1|LSAMP-AS3|LSAMPAS3|NCRNA00295	tumor suppressor candidate 7	ncRNA
36.7666-2	chr4	116166492	116166724	+	0.233333	NA	Intergenic	L1PA13|LINE|L1	-133117	NR_031737	100302290		NR_031737	ENSG00000284253	MIR1973	hsa-mir-1973|mir-1973	microRNA 1973	ncRNA
37.6-4	chr4	30647689	30647912	+	0.233333	NA	Intergenic	L1MA9|LINE|L1	-72569	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
43.3332	chr11	111888167	111888425	+	0.233333	NA	Intergenic	AluSz|SINE|Alu	8755	NM_022761	64776	Hs.17546	NM_022761	ENSG00000137720	C11orf1	-	chromosome 11 open reading frame 1	protein-coding
41.3666-4	chr8	27124609	27124864	+	0.233333	NA	Intergenic	Charlie7|DNA|hAT-Charlie	-75773	NR_031680	100313884		NR_031680	ENSG00000221616	MIR548H4	MIR548H-4|MIRN548H4|hsa-mir-548h-4	microRNA 548h-4	ncRNA
30.3666-2	chr5	10555687	10556027	+	0.233333	NA	Intergenic	Intergenic	-8213	NM_001164440	651746	Hs.26039	NM_001164440	ENSG00000164236	ANKRD33B	-	ankyrin repeat domain 33B	protein-coding
31.2-16	chr5	88488063	88488361	+	0.233333	NA	Intergenic	Intergenic	-49122	NR_105021	102546226	Hs.535810	NR_105021	ENSG00000250156	LINC02060	-	long intergenic non-protein coding RNA 2060	ncRNA
62.1666	chr1	166875835	166876151	+	0.233333	NA	intron (NM_053053, intron 1 of 7)	CpG	271	NM_053053	117143	Hs.435967	NM_053053	ENSG00000152382	TADA1	ADA1|HFI1|STAF42|TADA1L|hADA1	transcriptional adaptor 1	protein-coding
34.7666-3	chr9	119009303	119009526	+	0.233333	NA	Intergenic	Intergenic	329743	NR_151725	111216287		NR_151725		LINC02578	-	long intergenic non-protein coding RNA 2578	ncRNA
47.9333-2	chr6	140586863	140587146	+	0.233333	NA	Intergenic	L1P4e|LINE|L1	-96810	NR_039675	100616180		NR_039675	ENSG00000264390	MIR4465	-	microRNA 4465	ncRNA
53.4334	chr6	83605127	83605498	+	0.233333	NA	intron (NM_001242792, intron 13 of 28)	intron (NM_001242792, intron 13 of 28)	92778	NM_001170423	167681	Hs.98381	NM_153362	ENSG00000146250	PRSS35	C6orf158|dJ223E3.1	serine protease 35	protein-coding
36.8333-8	chr7	149776676	149776897	+	0.233333	NA	intron (NR_163594, intron 2 of 102)	intron (NR_163594, intron 2 of 102)	744	NR_163594	23145	Hs.632022	NR_163594	ENSG00000197558	SSPO	-	SCO-spondin	pseudo
33.7-7	chr15	90999771	91000050	+	0.233333	NA	exon (NM_018668, exon 21 of 23)	exon (NM_018668, exon 21 of 23)	-5375	NM_001267580	9055	Hs.366401	NM_003981	ENSG00000198901	PRC1	ASE1	protein regulator of cytokinesis 1	protein-coding
64.5-4	chr8	119736635	119737263	+	0.233333	NA	intron (NM_003184, intron 25 of 25)	L1MC5|LINE|L1	-63559	NM_001330600	5168	Hs.190977	NM_006209	ENSG00000136960	ENPP2	ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2	ectonucleotide pyrophosphatase/phosphodiesterase 2	protein-coding
33.8	chr1	233598074	233598266	+	0.233333	NA	Intergenic	AluSq2|SINE|Alu	-15936	NM_002245	3775	Hs.208544	NM_002245	ENSG00000135750	KCNK1	DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1	potassium two pore domain channel subfamily K member 1	protein-coding
44.4999	chr11	39145037	39145483	+	0.233333	NA	Intergenic	Intergenic	496402	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
46.8333-2	chr3	54885500	54886061	+	0.233333	NA	intron (NM_018398, intron 23 of 37)	intron (NM_018398, intron 23 of 37)	15475	NR_046666	100874237	Hs.570583	NR_046666	ENSG00000243715	CACNA2D3-AS1	-	CACNA2D3 antisense RNA 1	ncRNA
58.0333	chr2	123265371	123265790	+	0.233333	NA	Intergenic	L1MA3|LINE|L1	-192099	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
60.6001-2	chr15	90064180	90064511	+	0.233333	NA	intron (NM_198526, intron 1 of 4)	L2b|LINE|L2	17862	NR_146321	109729181	Hs.655249	NR_146321	ENSG00000259291	ZNF710-AS1	-	ZNF710 antisense RNA 1	ncRNA
19.1-6	chr11	5942848	5942971	+	0.233333	NA	Intergenic	Intergenic	-4438	NM_001003443	390083	Hs.553741	NM_001003443	ENSG00000184478	OR56A3	OR56A2P|OR56A3P|OR56A6	olfactory receptor family 56 subfamily A member 3	protein-coding
55.1999	chr2	45654425	45654732	+	0.233333	NA	intron (NM_005400, intron 1 of 14)	intron (NM_005400, intron 1 of 14)	2903	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding
69.0999	chr7	5228585	5229087	+	0.233333	NA	intron (NM_016003, intron 10 of 11)	AluJb|SINE|Alu	14567	NM_001033520	26100	Hs.122363	NM_015610	ENSG00000157954	WIPI2	ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2	WD repeat domain, phosphoinositide interacting 2	protein-coding
68.1999	chr8	134597449	134598213	+	0.233333	NA	promoter-TSS (NR_002438)	promoter-TSS (NR_002438)	-240	NR_002438	594840	Hs.626298	NR_002438	ENSG00000248492	ZFAT-AS1	NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS	ZFAT antisense RNA 1	ncRNA
47.6666-4	chr7	23049275	23049662	+	0.233333	NA	Intergenic	Intergenic	-35338	NM_032581	84668	Hs.85603	NM_032581	ENSG00000122591	FAM126A	DRCTNNB1A|HCC|HLD5|HYCC1	family with sequence similarity 126 member A	protein-coding
70.5666	chr9	93781191	93781730	+	0.233333	NA	Intergenic	L1MB4|LINE|L1	-37897	NR_036254	100422927		NR_036254	ENSG00000265347	MIR4291	-	microRNA 4291	ncRNA
54.7666	chr15	92190146	92190508	+	0.233333	NA	Intergenic	Intergenic	-203554	NM_006011	8128	Hs.302341	NM_006011	ENSG00000140557	ST8SIA2	HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
81.6334	chr14	80998593	80999189	+	0.233333	NA	intron (NM_001142626, intron 1 of 8)	intron (NM_001142626, intron 1 of 8)	43270	NM_001018036	7253	Hs.160411	NM_000369	ENSG00000165409	TSHR	CHNG1|LGR3|hTSHR-I	thyroid stimulating hormone receptor	protein-coding
39.7	chr17	60755840	60756145	+	0.233333	NA	intron (NM_001330413, intron 6 of 25)	L1MA4A|LINE|L1	78141	NM_001353144	54828	Hs.655028	NM_017679	ENSG00000141376	BCAS3	GAOB1|MAAB	BCAS3 microtubule associated cell migration factor	protein-coding
48.3667	chr2	61289820	61290287	+	0.233333	NA	intron (NM_014709, intron 33 of 79)	L1ME2|LINE|L1	112635	NR_152215	130872	Hs.655602	NM_152392	ENSG00000173209	AHSA2P	AHA1|AHSA2|Hch1	activator of HSP90 ATPase homolog 2, pseudogene	pseudo
64.6	chr6	43449549	43449985	+	0.233333	NA	TTS (NM_206539)	TTS (NM_206539)	5781	NM_001286656	65989	Hs.337251	NM_023932	ENSG00000171462	DLK2	DLK-2|EGFL9	delta like non-canonical Notch ligand 2	protein-coding
40.1	chr21	28938557	28938869	+	0.233333	NA	intron (NM_015565, intron 25 of 29)	L1MB7|LINE|L1	-53340	NM_182749	29104	Hs.163846	NM_013240	ENSG00000156239	N6AMT1	C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P	N-6 adenine-specific DNA methyltransferase 1	protein-coding
35.5-3	chr5	30188171	30188629	+	0.233333	NA	Intergenic	L1M5|LINE|L1	307840	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
74.9333	chr12	30537301	30537859	+	0.233333	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	139664	NM_001190995	10526	Hs.505136	NM_006390	ENSG00000133704	IPO8	RANBP8	importin 8	protein-coding
65.1667	chr6	8789313	8789771	+	0.233333	NA	Intergenic	LTR88c|LTR|Gypsy?	137333	NR_004855	728655	Hs.214343	NR_004855		HULC	HCCAT1|LINC00078|NCRNA00078	hepatocellular carcinoma up-regulated long non-coding RNA	ncRNA
26.5333-7	chr20	55922623	55922800	+	0.233333	NA	Intergenic	Intergenic	82808	NM_080617	140689	Hs.126141	NM_080617	ENSG00000054803	CBLN4	CBLNL1	cerebellin 4 precursor	protein-coding
24.4-7	chr12	66198613	66198724	+	0.233333	NA	intron (NM_001142523, intron 1 of 10)	intron (NM_001142523, intron 1 of 10)	9454	NM_007199	11213	Hs.369265	NM_007199	ENSG00000090376	IRAK3	ASRT5|IRAKM	interleukin 1 receptor associated kinase 3	protein-coding
77.5333	chr1	108990722	108991263	+	0.233333	NA	intron (NM_014969, intron 9 of 14)	FAM|SINE|Alu	-27493	NM_015127	23155	Hs.658489	NM_015127	ENSG00000121940	CLCC1	MCLC	chloride channel CLIC like 1	protein-coding
44.8999-2	chr7	46566980	46567448	+	0.233333	NA	Intergenic	Intergenic	129908	NR_134575	730338	Hs.640207	NR_134575	ENSG00000233539	LOC730338	-	uncharacterized LOC730338	ncRNA
36.0666	chr2	17849763	17850194	+	0.233333	NA	Intergenic	Intergenic	-27869	NM_001282428	3790	Hs.414489	NM_002252	ENSG00000170745	KCNS3	KV9.3	potassium voltage-gated channel modifier subfamily S member 3	protein-coding
34.7-8	chr4	64362322	64362537	+	0.233333	NA	intron (NM_001363796, intron 2 of 11)	L1PA15|LINE|L1	47021	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
67.4999	chr20	63201673	63202011	+	0.233333	NA	intron (NM_017798, intron 4 of 4)	intron (NM_017798, intron 4 of 4)	14289	NM_017798	54915	Hs.744852	NM_017798	ENSG00000149658	YTHDF1	C20orf21	YTH N6-methyladenosine RNA binding protein 1	protein-coding
20.3667	chr1	167457869	167458002	+	0.233333	NA	intron (NM_000734, intron 1 of 7)	intron (NM_000734, intron 1 of 7)	60594	NM_000734	919	Hs.156445	NM_000734	ENSG00000198821	CD247	CD3-ZETA|CD3H|CD3Q|CD3Z|IMD25|T3Z|TCRZ	CD247 molecule	protein-coding
45.9333	chr15	77522618	77523048	+	0.233333	NA	Intergenic	L1MC4|LINE|L1	-2762	NR_135692	101929457	Hs.637111	NR_135692	ENSG00000259362	LOC101929457	-	uncharacterized LOC101929457	ncRNA
36.8666-5	chr4	40621598	40621830	+	0.233333	NA	intron (NM_001371114, intron 1 of 5)	intron (NM_001371114, intron 1 of 5)	8150	NM_001098634	54502	Hs.518727	NM_019027	ENSG00000163694	RBM47	NET18	RNA binding motif protein 47	protein-coding
56.4666	chr5	58863814	58864135	+	0.233333	NA	Intergenic	Intergenic	135924	NM_001197223	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
44.8333-2	chr9	22581815	22582256	+	0.233333	NA	Intergenic	Intergenic	-64165	NR_038977	441389		NR_038977	ENSG00000234840	LINC01239	-	long intergenic non-protein coding RNA 1239	ncRNA
49.3333	chr1	183515354	183515745	+	0.233333	NA	intron (NM_001331007, intron 3 of 23)	intron (NM_001331007, intron 3 of 23)	43050	NM_173156	9887	Hs.591463	NM_014837	ENSG00000116698	SMG7	C1orf16|EST1C|SGA56M	SMG7 nonsense mediated mRNA decay factor	protein-coding
30.3666-3	chr8	88830570	88830826	+	0.233333	NA	Intergenic	Intergenic	-503215	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
24.7-9	chr20	44720007	44720227	+	0.233333	NA	exon (NM_001323369, exon 2 of 3)	exon (NM_001323369, exon 2 of 3)	5273	NM_001323369	8839	Hs.592145	NM_003881	ENSG00000064205	CCN5	CT58|CTGF-L|WISP2	cellular communication network factor 5	protein-coding
47.1666-3	chr4	63687413	63687728	+	0.233333	NA	Intergenic	L1MCa|LINE|L1	721880	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
77.4332	chr21	29696535	29696874	+	0.233333	NA	intron (NM_000830, intron 1 of 16)	L2c|LINE|L2	-51471	NR_027021	642976	Hs.473554	NR_027021		GRIK1-AS1	C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110	GRIK1 antisense RNA 1	ncRNA
36.9-4	chr4	182403521	182403930	+	0.233333	NA	intron (NM_001080477, intron 3 of 27)	intron (NM_001080477, intron 3 of 27)	160323	NM_001080477	55714	Hs.130438	NM_001080477	ENSG00000218336	TENM3	MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3	teneurin transmembrane protein 3	protein-coding
60.7666-3	chr4	89889781	89890219	+	0.233333	NA	intron (NM_001371403, intron 1 of 8)	intron (NM_001371403, intron 1 of 8)	-4854	NM_007351	22915	Hs.268107	NM_007351	ENSG00000138722	MMRN1	ECM|EMILIN4|GPIa*|MMRN	multimerin 1	protein-coding
43.4333-4	chr5	25538856	25539254	+	0.233333	NA	Intergenic	Intergenic	348102	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
29.5-4	chr15	40524852	40525000	+	0.233333	NA	Intergenic	AluJo|SINE|Alu	7624	NR_002208	359821	Hs.678598	NR_002208		MRPL42P5	-	mitochondrial ribosomal protein L42 pseudogene 5	pseudo
88.6999	chr2	78925710	78926503	+	0.233333	NA	Intergenic	MIRb|SINE|MIR	-99596	NM_001270040	130120	Hs.447084	NM_198448	ENSG00000143954	REG3G	LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429	regenerating family member 3 gamma	protein-coding
29.7333-11	chr3	181940348	181940735	+	0.233333	NA	Intergenic	Intergenic	-11823	NR_104146	100996490	Hs.606987	NR_104146	ENSG00000242512	LINC01206	-	long intergenic non-protein coding RNA 1206	ncRNA
39.8333	chr12	46803403	46803630	+	0.233333	NA	intron (NM_001143824, intron 1 of 15)	intron (NM_001143824, intron 1 of 15)	22481	NM_001143824	55089	Hs.446077	NM_018018	ENSG00000139209	SLC38A4	ATA3|NAT3|PAAT|SNAT4	solute carrier family 38 member 4	protein-coding
40-4	chr1	181376808	181377174	+	0.233333	NA	Intergenic	Intergenic	-106526	NM_001205293	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding
92.4	chr11	113124552	113125236	+	0.233333	NA	intron (NM_181351, intron 1 of 18)	intron (NM_181351, intron 1 of 18)	149007	NR_034101	100288346	Hs.661826	NR_034101	ENSG00000227487	NCAM1-AS1	-	NCAM1 antisense RNA1	ncRNA
42.3666-2	chr3	101273456	101273646	+	0.233333	NA	intron (NM_016247, intron 7 of 18)	intron (NM_016247, intron 7 of 18)	47024	NM_016247	50939	Hs.209249	NM_016247	ENSG00000081148	IMPG2	IPM200|RP56|SPACRCAN|VMD5	interphotoreceptor matrix proteoglycan 2	protein-coding
31.1	chr1	49081174	49081370	+	0.233333	NA	intron (NM_001323575, intron 4 of 12)	intron (NM_001323575, intron 4 of 12)	-176139	NR_125988	101929721	Hs.639985	NR_125988	ENSG00000230114	LOC101929721	-	uncharacterized LOC101929721	ncRNA
65.0333	chr16	78189264	78189603	+	0.233333	NA	intron (NM_001291997, intron 4 of 7)	intron (NM_001291997, intron 4 of 7)	89779	NM_001291997	51741	Hs.461453	NM_016373	ENSG00000186153	WWOX	D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1	WW domain containing oxidoreductase	protein-coding
80.6332	chr4	104806682	104807315	+	0.233333	NA	Intergenic	L1MA3|LINE|L1	-312104	NR_132741	80319	Hs.12248	NM_025212	ENSG00000168772	CXXC4	IDAX	CXXC finger protein 4	protein-coding
53.1333-2	chr9	28257979	28258286	+	0.233333	NA	intron (NM_152570, intron 5 of 6)	intron (NM_152570, intron 5 of 6)	461173	NM_152570	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
43.0333-3	chr14	83620836	83621184	+	0.233333	NA	Intergenic	Intergenic	978378	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
65.5333	chr2	23591818	23592179	+	0.233333	NA	intron (NM_052920, intron 3 of 13)	intron (NM_052920, intron 3 of 13)	206819	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding
27.9666-3	chr2	99138261	99138427	+	0.233333	NA	intron (NM_001349013, intron 1 of 16)	L2a|LINE|L2	2836	NR_146001	80705	Hs.120267	NM_025244	ENSG00000135951	TSGA10	CEP4L|CT79|SPGF26	testis specific 10	protein-coding
31-8	chr22	26386375	26386616	+	0.233333	NA	Intergenic	MER44B|DNA|TcMar-Tigger	-42765	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding
43.3666-2	chr18	39195159	39195435	+	0.233333	NA	Intergenic	Intergenic	426878	NR_030628	100126323		NR_030628	ENSG00000283615	MIR924	MIRN924|hsa-mir-924	microRNA 924	ncRNA
38.7333-8	chr3	66613317	66613539	+	0.233333	NA	Intergenic	Intergenic	-113007	NM_015541	26018	Hs.518055	NM_015541	ENSG00000144749	LRIG1	LIG-1|LIG1	leucine rich repeats and immunoglobulin like domains 1	protein-coding
33.7333-9	chr7	128819470	128819845	+	0.233333	NA	intron (NM_001367763, intron 12 of 12)	MIR|SINE|MIR	-10749	NM_001127487	2318	Hs.58414	NM_001458	ENSG00000128591	FLNC	ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5	filamin C	protein-coding
35.5667-2	chr12	66952580	66952955	+	0.233333	NA	Intergenic	Intergenic	143517	NR_120490	102724421	Hs.135774	NR_120490	ENSG00000257083	LOC102724421	-	uncharacterized LOC102724421	ncRNA
27-13	chr19	1487639	1487788	+	0.233333	NA	intron (NM_017573, intron 5 of 14)	intron (NM_017573, intron 5 of 14)	2737	NM_017573	54760	Hs.46884	NM_017573	ENSG00000115257	PCSK4	PC4|SPC5	proprotein convertase subtilisin/kexin type 4	protein-coding
56.6999	chr12	42079044	42079342	+	0.233333	NA	Intergenic	Intergenic	65681	NM_001099650	283464	Hs.259347	NM_173601	ENSG00000151233	GXYLT1	GLT8D3	glucoside xylosyltransferase 1	protein-coding
40.1333	chr11	119718146	119718434	+	0.233333	NA	intron (NM_203285, intron 1 of 7)	intron (NM_203285, intron 1 of 7)	10910	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding
30.1-6	chr3	47412123	47412347	+	0.233333	NA	intron (NM_015466, intron 22 of 24)	intron (NM_015466, intron 22 of 24)	31214	NM_001304482	25930	Hs.25524	NM_015466	ENSG00000076201	PTPN23	HD-PTP|HDPTP|PTP-TD14	protein tyrosine phosphatase non-receptor type 23	protein-coding
64.5-3	chr8	88330922	88331510	+	0.233333	NA	Intergenic	Intergenic	-3733	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
43.7666-2	chr5	35356876	35357081	+	0.233333	NA	Intergenic	Intergenic	-126491	NM_000949	5618	Hs.368587	NM_000949	ENSG00000113494	PRLR	HPRL|MFAB|RI-PRLR|hPRLrI	prolactin receptor	protein-coding
54.7666-3	chr5	81433731	81434195	+	0.233333	NA	intron (NM_012446, intron 15 of 16)	intron (NM_012446, intron 15 of 16)	-39829	NM_130767	134526	Hs.591756	NM_130767	ENSG00000172497	ACOT12	CACH-1|Cach|STARD15|THEAL	acyl-CoA thioesterase 12	protein-coding
32.1333-4	chr20	38581694	38582006	+	0.233333	NA	intron (NR_130907, intron 1 of 2)	intron (NR_130907, intron 1 of 2)	653	NR_130907	149685	Hs.368028	NM_174906	ENSG00000182035	ADIG	SMAF1	adipogenin	protein-coding
12.6333-10	chr9	93929610	93929665	+	0.233333	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	25718	NM_021570	56033	Hs.164960	NM_021570	ENSG00000131668	BARX1	-	BARX homeobox 1	protein-coding
45.8	chr10	8797046	8797435	+	0.233333	NA	Intergenic	AluSq2|SINE|Alu	-100749	NR_131944	105755953	Hs.564146	NR_131944	ENSG00000234752	LINC02676	-	long intergenic non-protein coding RNA 2676	ncRNA
34.4-4	chr7	43287501	43287896	+	0.233333	NA	intron (NM_001287059, intron 2 of 27)	L2a|LINE|L2	136803	NR_037508	100500829		NR_037508	ENSG00000264069	MIR3943	-	microRNA 3943	ncRNA
28.6666-6	chr2	77909704	77909951	+	0.233333	NA	intron (NR_110288, intron 1 of 3)	intron (NR_110288, intron 1 of 3)	-6107	NR_110286	101927926	Hs.149042	NR_110286	ENSG00000233605	LINC01851	-	long intergenic non-protein coding RNA 1851	ncRNA
43.3999	chrX	87550116	87550547	+	0.233333	NA	intron (NM_057162, intron 1 of 10)	L1M1|LINE|L1	32529	NM_057162	56062	Hs.49075	NM_019117	ENSG00000102271	KLHL4	DKELCHL|KHL4	kelch like family member 4	protein-coding
45.5334	chr5	104737371	104737827	+	0.233333	NA	Intergenic	Intergenic	-361875	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
36.7333-4	chr2	98721789	98722094	+	0.233333	NA	intron (NM_012214, intron 2 of 15)	L1M4b|LINE|L1	9191	NM_012214	11320	Hs.177576	NM_012214	ENSG00000071073	MGAT4A	GNT-IV|GNT-IVA|GnT-4a	alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A	protein-coding
28.6333-5	chr2	33144450	33144602	+	0.233333	NA	intron (NM_206943, intron 5 of 33)	intron (NM_206943, intron 5 of 33)	9929	NM_001166266	4052	Hs.619315	NM_000627	ENSG00000049323	LTBP1	-	latent transforming growth factor beta binding protein 1	protein-coding
46.3333-4	chr8	103803577	103803897	+	0.233333	NA	intron (NM_001348497, intron 3 of 22)	MLT1E1A|LTR|ERVL-MaLR	-15483	NM_001348503	9699	Hs.655271	NM_014677	ENSG00000176406	RIMS2	OBOE|RAB3IP3|RIM2	regulating synaptic membrane exocytosis 2	protein-coding
27.8667-5	chr2	37109833	37110039	+	0.233333	NA	intron (NM_002759, intron 14 of 16)	L1ME2|LINE|L1	25485	NM_001322249	253635	Hs.595250	NM_174931	ENSG00000152133	GPATCH11	CCDC75|CENP-Y|CENPY	G-patch domain containing 11	protein-coding
63.2666-2	chrX	84335972	84336429	+	0.233333	NA	intron (NM_001177478, intron 7 of 9)	intron (NM_001177478, intron 7 of 9)	-110372	NR_031690	100302191		NR_031690	ENSG00000221494	MIR548I4	MIR548I-4|MIRN548I4|hsa-mir-548i-4	microRNA 548i-4	ncRNA
51.0666-2	chr4	34015325	34015709	+	0.233333	NA	intron (NR_125902, intron 1 of 4)	intron (NR_125902, intron 1 of 4)	24376	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
41.6667-6	chr6	52979546	52979759	+	0.233333	NA	intron (NM_001512, intron 6 of 6)	intron (NM_001512, intron 6 of 6)	15632	NM_001512	2941	Hs.485557	NM_001512	ENSG00000170899	GSTA4	GSTA4-4|GTA4	glutathione S-transferase alpha 4	protein-coding
52.7001	chr16	48808278	48808570	+	0.233333	NA	Intergenic	L1MCa|LINE|L1	-198244	NM_153029	9683	Hs.511839	NM_153029	ENSG00000102921	N4BP1	-	NEDD4 binding protein 1	protein-coding
32.7-6	chr3	109847077	109847257	+	0.233333	NA	Intergenic	Intergenic	244339	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
28.2666-2	chr8	121915696	121915827	+	0.233333	NA	Intergenic	Intergenic	-274321	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
42.4333-6	chr4	77984855	77985110	+	0.233333	NA	Intergenic	Intergenic	-72341	NM_025074	80144	Hs.369448	NM_020875	ENSG00000138759	FRAS1	FRASRS1	Fraser extracellular matrix complex subunit 1	protein-coding
31.9-8	chr9	107644445	107644733	+	0.233333	NA	Intergenic	AluJb|SINE|Alu	-154820	NM_004235	9314	Hs.376206	NM_004235	ENSG00000136826	KLF4	EZF|GKLF	Kruppel like factor 4	protein-coding
30.5666	chr17	64625694	64625857	+	0.233333	NA	intron (NM_022739, intron 1 of 18)	MER5A|DNA|hAT-Charlie	36532	NM_022739	64750	Hs.515011	NM_022739	ENSG00000108854	SMURF2	-	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
63.2666	chr5	5042147	5042586	+	0.233333	NA	intron (NR_026994, intron 2 of 6)	intron (NR_026994, intron 2 of 6)	8007	NR_026994	340094	Hs.665092	NR_026994	ENSG00000215231	LINC01020	-	long intergenic non-protein coding RNA 1020	ncRNA
40.7333-3	chr10	81835425	81835896	+	0.233333	NA	Intergenic	MIR|SINE|MIR	-39534	NM_001370083	10718	Hs.125119	NM_001010848	ENSG00000185737	NRG3	HRG3|pro-NRG3	neuregulin 3	protein-coding
19.5667-7	chr2	29144676	29144796	+	0.233333	NA	intron (NM_001287528, intron 7 of 14)	intron (NM_001287528, intron 7 of 14)	29321	NM_024692	79745	Hs.122927	NM_024692	ENSG00000115295	CLIP4	RSNL2	CAP-Gly domain containing linker protein family member 4	protein-coding
85.3	chr8	109788606	109789410	+	0.233333	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	-97217	NM_001099744	55638	Hs.390738	NM_017786	ENSG00000147642	SYBU	GOLSYN|OCSYN|SNPHL	syntabulin	protein-coding
26-4	chr18	47394691	47394828	+	0.233333	NA	intron (NR_147192, intron 1 of 2)	intron (NR_147192, intron 1 of 2)	14263	NR_039753	100616264		NR_039753	ENSG00000266582	MIR4527	-	microRNA 4527	ncRNA
36.2666	chr10	122690672	122690933	+	0.233333	NA	Intergenic	Intergenic	9044	NM_001010912	399814	Hs.363649	NM_001010912	ENSG00000183559	C10orf120	bA318C4.1	chromosome 10 open reading frame 120	protein-coding
35.1334-4	chr5	78185815	78186212	+	0.233333	NA	intron (NM_003664, intron 7 of 26)	L1MD1|LINE|L1	108685	NM_001271769	8546	Hs.532091	NM_003664	ENSG00000132842	AP3B1	ADTB3|ADTB3A|HPS|HPS2|PE	adaptor related protein complex 3 subunit beta 1	protein-coding
14.5-2	chr11	67115940	67116027	+	0.233333	NA	intron (NR_160735, intron 1 of 1)	intron (NR_160735, intron 1 of 1)	2365	NR_160735	107984341		NR_160735		LOC107984341	-	uncharacterized LOC107984341	ncRNA
66.9999	chr3	15181610	15181969	+	0.233333	NA	intron (NR_027927, intron 1 of 4)	MIR|SINE|MIR	24170	NR_027927	344875	Hs.722756	NR_027927	ENSG00000230524	COL6A4P1	COL6A4|COL6A4P|DIVA|DVWA|VWA6	collagen type VI alpha 4 pseudogene 1	pseudo
40.9666-2	chr5	29769690	29769969	+	0.233333	NA	Intergenic	AluSx3|SINE|Alu	-110731	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
102.6	chr14	73281069	73282083	+	0.233333	NA	intron (NM_001005743, intron 11 of 12)	intron (NM_001005743, intron 11 of 12)	-35575	NR_135248	101928123	Hs.660593	NR_135248		LOC101928123	-	uncharacterized LOC101928123	ncRNA
20.5666	chr11	33668087	33668221	+	0.233333	NA	exon (NM_012194, exon 21 of 21)	exon (NM_012194, exon 21 of 21)	32586	NM_001166692	100131378	Hs.709466	NM_001166692	ENSG00000205177	C11orf91	-	chromosome 11 open reading frame 91	protein-coding
30.8-8	chr4	32989468	32989676	+	0.233333	NA	Intergenic	MER5A|DNA|hAT-Charlie	638534	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
40.5-12	chr7	64458766	64459086	+	0.233333	NA	Intergenic	Tigger6a|DNA|TcMar-Tigger	25233	NR_029404	649395	Hs.728871	NR_029404		YWHAEP1	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1	pseudo
31.9333-9	chr4	187425015	187425212	+	0.233333	NA	intron (NR_038931, intron 1 of 4)	intron (NR_038931, intron 1 of 4)	54465	NR_149103	105377602	Hs.582096	NR_149103	ENSG00000250042	LINC02514	-	long intergenic non-protein coding RNA 2514	ncRNA
54.9666-3	chr16	25718303	25718677	+	0.233333	NA	intron (NM_006040, intron 1 of 1)	MLT1K|LTR|ERVL-MaLR	26531	NM_006040	9951	Hs.655275	NM_006040	ENSG00000182601	HS3ST4	3-OST-4|30ST4|3OST4|h3-OST-4	heparan sulfate-glucosamine 3-sulfotransferase 4	protein-coding
34.3999-2	chr20	40727974	40728155	+	0.233333	NA	Intergenic	L3|LINE|CR1	-13441	NR_145814	109623474		NR_145814		SNORD154	-	small nucleolar RNA, C/D box 154	snoRNA
39.5666	chr11	6792859	6793082	+	0.233333	NA	Intergenic	Intergenic	2938	NM_003696	8590	Hs.652252	NM_003696	ENSG00000184933	OR6A2	I7|OR11-55|OR6A1|OR6A2P	olfactory receptor family 6 subfamily A member 2	protein-coding
35.3666-2	chr2	206594814	206595226	+	0.233333	NA	intron (NM_003812, intron 23 of 25)	AluSc|SINE|Alu	-49207	NM_001102659	200726		NM_001102659	ENSG00000235118	FAM237A	-	family with sequence similarity 237 member A	protein-coding
77.2665	chr12	122096967	122097517	+	0.233333	NA	intron (NM_014938, intron 1 of 16).2	FRAM|SINE|Alu	18486	NM_014938	22877	Hs.437153	NM_014938	ENSG00000175727	MLXIP	MIR|MONDOA|bHLHe36	MLX interacting protein	protein-coding
22.6667-5	chr3	197579602	197579759	+	0.233333	NA	Intergenic	L1ME4b|LINE|L1	-6357	NM_203315	622	Hs.274539	NM_004051	ENSG00000161267	BDH1	BDH|SDR9C1	3-hydroxybutyrate dehydrogenase 1	protein-coding
32.2666-4	chr2	112288601	112288810	+	0.233333	NA	intron (NM_198581, intron 1 of 11)	intron (NM_198581, intron 1 of 11)	13108	NM_198581	376940	Hs.190477	NM_198581	ENSG00000188177	ZC3H6	ZC3HDC6	zinc finger CCCH-type containing 6	protein-coding
40-6	chr15	55917195	55917439	+	0.233333	NA	promoter-TSS (NM_001284338)	promoter-TSS (NM_001284338)	-186	NM_001284340	4734	Hs.1565	NM_006154	ENSG00000069869	NEDD4	NEDD4-1|RPF1	NEDD4 E3 ubiquitin protein ligase	protein-coding
56.5666	chr22	40177625	40177905	+	0.233333	NA	promoter-TSS (NM_001162501)	promoter-TSS (NM_001162501)	-160	NM_001162501	23112	Hs.372082	NM_015088	ENSG00000100354	TNRC6B	-	trinucleotide repeat containing adaptor 6B	protein-coding
60.6333	chr5	63575588	63575915	+	0.233333	NA	Intergenic	L2b|LINE|L2	386541	NM_000524	3350	Hs.247940	NM_000524	ENSG00000178394	HTR1A	5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD	5-hydroxytryptamine receptor 1A	protein-coding
54.8666	chr2	236483907	236484282	+	0.233333	NA	intron (NR_073043, intron 5 of 19)	intron (NR_073043, intron 5 of 19)	19603	NM_001270585	79781	Hs.591594	NM_024726	ENSG00000132321	IQCA1	4930465P12Rik|DRC11|IQCA	IQ motif containing with AAA domain 1	protein-coding
55.4332-2	chr2	199597675	199598089	+	0.233333	NA	Intergenic	L1ME3G|LINE|L1	-10186	NR_110270	101927641	Hs.549598	NR_110270	ENSG00000238217	LINC01877	-	long intergenic non-protein coding RNA 1877	ncRNA
22.1666	chr5	27446339	27446527	+	0.233333	NA	Intergenic	L1MA4|LINE|L1	-25859	NR_038848	643401	Hs.533212	NR_038848	ENSG00000250337	PURPL	LINC01021	p53 upregulated regulator of p53 levels	ncRNA
62.9334	chr11	60565818	60566221	+	0.233333	NA	Intergenic	LTR25-int|LTR|ERV1	-49732	NR_026946	283197	Hs.372650	NM_174939	ENSG00000181995	LINC00301	C11orf64|NCRNA00301	long intergenic non-protein coding RNA 301	ncRNA
31.4333	chr13	32804487	32804704	+	0.233333	NA	Intergenic	Intergenic	107057	NR_047020	100874167	Hs.406290	NR_047020		LINC00423	-	long intergenic non-protein coding RNA 423	ncRNA
29.3667	chr1	115451406	115451565	+	0.233333	NA	Intergenic	Intergenic	-113249	NM_002506	4803	Hs.2561	NM_002506	ENSG00000134259	NGF	Beta-NGF|HSAN5|NGFB	nerve growth factor	protein-coding
31.2666	chr12	4640559	4640744	+	0.233333	NA	intron (NM_001278309, intron 3 of 5)	intron (NM_001278309, intron 3 of 5)	8396	NM_006422	10566	Hs.98397	NM_006422	ENSG00000111254	AKAP3	AKAP 110|AKAP110|CT82|FSP95|HEL159|PRKA3|SOB1	A-kinase anchoring protein 3	protein-coding
64.1666-2	chr9	103137314	103137684	+	0.233333	NA	Intergenic	Intergenic	142166	NM_001340	1539	Hs.3232	NM_001340	ENSG00000155833	CYLC2	-	cylicin 2	protein-coding
52.2333-2	chr4	1622774	1623174	+	0.233333	NA	Intergenic	Intergenic	61017	NM_001013622	152877	Hs.143314	NM_001013622	ENSG00000174137	FAM53A	DNTNP	family with sequence similarity 53 member A	protein-coding
62.5666	chr13	98292428	98292731	+	0.233333	NA	intron (NM_005766, intron 2 of 26)	MER3|DNA|hAT-Charlie	84055	NR_036129	100422881		NR_036129	ENSG00000263399	MIR3170	mir-3170	microRNA 3170	ncRNA
26.7666-3	chr7	17310369	17310490	+	0.233333	NA	intron (NM_001621, intron 2 of 10)	intron (NM_001621, intron 2 of 10)	11777	NM_001621	196	Hs.171189	NM_001621	ENSG00000106546	AHR	RP85|bHLHe76	aryl hydrocarbon receptor	protein-coding
42.2999	chr10	121044724	121044927	+	0.233333	NA	Intergenic	AluSg|SINE|Alu	193463	NM_018117	55717	Hs.144447	NM_018117	ENSG00000120008	WDR11	BRWD2|DR11|HH14|SRI1|WDR15	WD repeat domain 11	protein-coding
25.3666-5	chr7	29312815	29313005	+	0.233333	NA	intron (NM_001293070, intron 2 of 13)	intron (NM_001293070, intron 2 of 13)	-103940	NR_120522	102724484	Hs.638665	NR_120522		LOC102724484	-	uncharacterized LOC102724484	ncRNA
64.7999	chrX	72380402	72380891	+	0.233333	NA	intron (NR_051952, intron 8 of 9)	MER58A|DNA|hAT-Charlie	-73489	NM_001144886	4435	Hs.40403	NM_004143	ENSG00000125931	CITED1	MSG1	Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1	protein-coding
112.367	chr1	53480219	53480765	+	0.233333	NA	Intergenic	MLT1E1A|LTR|ERVL-MaLR	21093	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding
41	chr11	77769889	77770104	+	0.233333	NA	intron (NM_016578, intron 1 of 15)	intron (NM_016578, intron 1 of 15)	50838	NM_016578	51773	Hs.420229	NM_016578	ENSG00000048649	RSF1	HBXAP|RSF-1|XAP8|p325	remodeling and spacing factor 1	protein-coding
44.6999-2	chr15	79876018	79876291	+	0.233333	NA	intron (NR_037654, intron 2 of 2)	L1M4a1|LINE|L1	20843	NR_037654	10588	Hs.194294	NM_006441	ENSG00000136371	MTHFS	HsT19268|NEDMEHM	methenyltetrahydrofolate synthetase	protein-coding
56.5999	chr17	61245805	61246131	+	0.233333	NA	intron (NM_001330413, intron 23 of 25)	intron (NM_001330413, intron 23 of 25)	121736	NR_136397	101927855	Hs.662123	NR_136397	ENSG00000267131	LOC101927855	-	uncharacterized LOC101927855	ncRNA
69.8666-2	chr8	121427360	121427759	+	0.233333	NA	Intergenic	Intergenic	-211787	NR_002835	594842	Hs.668686	NR_002835		HAS2-AS1	HAS2-AS|HAS2AS|HASNT|NCRNA00077	HAS2 antisense RNA 1	ncRNA
25.3666-4	chr5	120736795	120736962	+	0.233333	NA	Intergenic	L1MB2|LINE|L1	205414	NM_001308088	51334	Hs.157461	NM_016644	ENSG00000184838	PRR16	DSC54|LARGEN	proline rich 16	protein-coding
55.4332	chr2	20454099	20454475	+	0.233333	NA	Intergenic	AluJr|SINE|Alu	7213	NM_004040	388	Hs.502876	NM_004040	ENSG00000143878	RHOB	ARH6|ARHB|MST081|MSTP081|RHOH6	ras homolog family member B	protein-coding
31.2-17	chr6	7725930	7726068	+	0.233333	NA	promoter-TSS (NM_001718)	promoter-TSS (NM_001718)	-100	NM_001718	654	Hs.285671	NM_001718	ENSG00000153162	BMP6	VGR|VGR1	bone morphogenetic protein 6	protein-coding
81.8667	chr1	70901806	70902404	+	0.233333	NA	intron (NR_028293, intron 2 of 4)	intron (NR_028293, intron 2 of 4)	-144401	NR_038420	100132618	Hs.720513	NR_038420		ZRANB2-AS1	-	ZRANB2 antisense RNA 1	ncRNA
31.9667	chr2	42372258	42372569	+	0.233333	NA	Intergenic	(CCAGG)n|Simple_repeat|Simple_repeat	-3456	NM_001319036	9167	Hs.339639	NM_004718	ENSG00000115944	COX7A2L	COX7AR|COX7RP|EB1|SIG81	cytochrome c oxidase subunit 7A2 like	protein-coding
41.6666-3	chr8	82465057	82465556	+	0.233333	NA	Intergenic	Intergenic	-446798	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
52.8333-2	chr9	28218764	28219237	+	0.233333	NA	intron (NM_152570, intron 5 of 6)	intron (NM_152570, intron 5 of 6)	500305	NM_152570	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
61.9667	chr10	74281794	74282128	+	0.233333	NA	intron (NM_001369124, intron 3 of 9)	intron (NM_001369124, intron 3 of 9)	105198	NM_001369124	132	Hs.656586	NM_001123	ENSG00000156110	ADK	AK	adenosine kinase	protein-coding
35.4666-3	chr11	58607917	58608176	+	0.233333	NA	intron (NM_001197051, intron 2 of 10)	L1ME4b|LINE|L1	-14619	NM_000614	1270	Hs.524920	NM_000614	ENSG00000242689	CNTF	HCNTF	ciliary neurotrophic factor	protein-coding
36.1333-10	chr8	118093617	118093925	+	0.233333	NA	intron (NM_000127, intron 1 of 10)	intron (NM_000127, intron 1 of 10)	18048	NM_000127	2131	Hs.492618	NM_000127	ENSG00000182197	EXT1	EXT|LGCR|LGS|TRPS2|TTV	exostosin glycosyltransferase 1	protein-coding
59.9666	chr2	104708193	104708483	+	0.233333	NA	Intergenic	Intergenic	49381	NR_038231	284998	Hs.410180	NR_038231	ENSG00000234177	LINC01114	PANCAT	long intergenic non-protein coding RNA 1114	ncRNA
42.9-4	chr3	38224281	38224551	+	0.233333	NA	intron (NM_005109, intron 7 of 17)	Tigger16b|DNA|TcMar-Tigger	-41396	NM_004256	9390	Hs.225941	NM_004256	ENSG00000172940	SLC22A13	OAT10|OCTL1|OCTL3|ORCTL-3|ORCTL3	solute carrier family 22 member 13	protein-coding
66.5666	chr10	119528456	119529025	+	0.233333	NA	intron (NM_001005339, intron 1 of 4)	AluSx|SINE|Alu	7793	NM_002925	6001	Hs.501200	NM_002925	ENSG00000148908	RGS10	-	regulator of G protein signaling 10	protein-coding
42.4667	chr4	36089683	36090165	+	0.233333	NA	intron (NR_146894, intron 28 of 32)	intron (NR_146894, intron 28 of 32)	154015	NR_146893	116984	Hs.479451	NM_015230	ENSG00000047365	ARAP2	CENTD1|PARX	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	protein-coding
48.6666	chr1	224680768	224681138	+	0.233333	NA	intron (NM_152495, intron 1 of 5)	intron (NM_152495, intron 1 of 5)	64636	NR_136287	149111	Hs.731723	NM_152495	ENSG00000143786	CNIH3	CNIH-3	cornichon family AMPA receptor auxiliary protein 3	protein-coding
27.5666-2	chr19	39287913	39288120	+	0.233333	NA	Intergenic	AluSz6|SINE|Alu	-8391	NM_172140	282618	Hs.406745	NM_172140	ENSG00000182393	IFNL1	IL-29|IL29	interferon lambda 1	protein-coding
69.0666	chr5	78522464	78522809	+	0.233333	NA	intron (NM_005779, intron 3 of 4)	intron (NM_005779, intron 3 of 4)	126136	NM_005779	10184	Hs.79299	NM_005779	ENSG00000145685	LHFPL2	-	LHFPL tetraspan subfamily member 2	protein-coding
32.3666-7	chr3	76540748	76541024	+	0.233333	NA	Intergenic	AluSz|SINE|Alu	-499213	NM_001290040	6092	Hs.13305	NM_002942	ENSG00000185008	ROBO2	SAX3	roundabout guidance receptor 2	protein-coding
31.6-5	chr7	126338493	126338728	+	0.233333	NA	Intergenic	LTR16C|LTR|ERVL	719574	NR_030323	693177		NR_030323	ENSG00000207692	MIR592	MIRN592|hsa-mir-592|mir-592	microRNA 592	ncRNA
37-6	chr4	42850272	42850623	+	0.233333	NA	Intergenic	L1PA16|LINE|L1	-42819	NM_001080476	389207	Hs.162559	NM_001080476	ENSG00000215203	GRXCR1	DFNB25|PPP1R88	glutaredoxin and cysteine rich domain containing 1	protein-coding
79.0332	chr21	16646370	16646782	+	0.233333	NA	Intergenic	L1ME2|LINE|L1	56339	NR_029694	406912		NR_029694	ENSG00000207863	MIR125B2	MIRN125B2|mir-125b-2	microRNA 125b-2	ncRNA
22-4	chr16	9905360	9905745	+	0.233333	NA	intron (NM_001134408, intron 3 of 13)	intron (NM_001134408, intron 3 of 13)	276515	NM_001134408	2903	Hs.411472	NM_000833	ENSG00000183454	GRIN2A	EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A	glutamate ionotropic receptor NMDA type subunit 2A	protein-coding
34.2999-3	chr7	53592744	53592920	+	0.233333	NA	Intergenic	MLT1N2|LTR|ERVL-MaLR	219099	NR_038371	401337	Hs.531378	NM_001001707	ENSG00000205628	LINC01446	GS1-179L18.1	long intergenic non-protein coding RNA 1446	ncRNA
56.8333	chr8	36313690	36314233	+	0.233333	NA	Intergenic	Intergenic	-470413	NM_001031836	157855	Hs.13861	NM_001031836	ENSG00000215262	KCNU1	KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3	potassium calcium-activated channel subfamily U member 1	protein-coding
51.8	chr10	77175318	77175608	+	0.233333	NA	intron (NM_001271519, intron 5 of 28)	L2a|LINE|L2	34632	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA
28.8666-3	chr13	62038573	62038791	+	0.233333	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-9134	NR_046995	100874143	Hs.552684	NR_046995	ENSG00000229578	LINC00358	-	long intergenic non-protein coding RNA 358	ncRNA
36.2999	chr1	176773793	176774090	+	0.233333	NA	intron (NM_020318, intron 17 of 22)	intron (NM_020318, intron 17 of 22)	255504	NR_030163	574441		NR_030163	ENSG00000202609	MIR488	MIRN488|hsa-mir-488|mir-488	microRNA 488	ncRNA
41.2333-2	chr10	43435506	43435795	+	0.233333	NA	Intergenic	AluSq|SINE|Alu	-1198	NM_001355448	642819	Hs.719657	NM_001355444	ENSG00000243660	ZNF487	KRBO1|ZNF487P	zinc finger protein 487	protein-coding
49.7-2	chr5	38179474	38179779	+	0.233333	NA	intron (NR_147009, intron 2 of 2)	LTR82B|LTR|ERVL	31146	NR_134272	101929745	Hs.374715	NR_134272	ENSG00000248461	LINC02119	-	long intergenic non-protein coding RNA 2119	ncRNA
43.0667-5	chr14	71804288	71804632	+	0.233333	NA	Intergenic	Intergenic	-127711	NM_001370270	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G protein signaling 6	protein-coding
48.0666-3	chr2	224923205	224923590	+	0.233333	NA	intron (NM_001290263, intron 2 of 55)	intron (NM_001290263, intron 2 of 55)	23652	NM_001290263	55619	Hs.46578	NM_014689	ENSG00000135905	DOCK10	DRIP2|Nbla10300|ZIZ3	dedicator of cytokinesis 10	protein-coding
56	chr10	29046144	29046523	+	0.233333	NA	Intergenic	Intergenic	199925	NM_001278522	283080		NM_001278522		C10orf126	bA492M23.1	chromosome 10 open reading frame 126	protein-coding
55.2-4	chr7	10296233	10296686	+	0.233333	NA	Intergenic	Intergenic	-406217	NR_149037	100131472	Hs.170681	NR_149037		LOC100131472	-	uncharacterized LOC100131472	ncRNA
41.1-5	chr9	127448346	127448614	+	0.233333	NA	TTS (NR_002449)	TTS (NR_002449)	157	NR_002449	26783	Hs.408054	NR_002449	ENSG00000201302	SNORA65	RNU65|U65	small nucleolar RNA, H/ACA box 65	snoRNA
27.6333-5	chr15	48446396	48446828	+	0.233333	NA	intron (NM_000138, intron 47 of 65)	intron (NM_000138, intron 47 of 65)	114415	NM_001948	1854	Hs.527980	NM_001948	ENSG00000128951	DUT	dUTPase	deoxyuridine triphosphatase	protein-coding
31.6666-2	chr12	118463463	118463746	+	0.233333	NA	Intergenic	MER90a|LTR|ERV1	87049	NM_022491	64426	Hs.416630	NM_022491	ENSG00000111707	SUDS3	SAP45|SDS3	SDS3 homolog, SIN3A corepressor complex component	protein-coding
46.6333-4	chr8	29517150	29517496	+	0.233333	NA	Intergenic	Intergenic	-166639	NM_001394	1846	Hs.417962	NM_001394	ENSG00000120875	DUSP4	HVH2|MKP-2|MKP2|TYP	dual specificity phosphatase 4	protein-coding
23.5-16	chr6	65124544	65124649	+	0.233333	NA	intron (NM_001292009, intron 12 of 43)	intron (NM_001292009, intron 12 of 43)	-176822	NM_001271675	441155	Hs.546686	NM_001271675		LOC441155	-	zinc finger CCCH-type domain-containing-like	protein-coding
32.5333-10	chr8	11752095	11752380	+	0.233333	NA	intron (NM_001308093, intron 3 of 5)	intron (NM_001308093, intron 3 of 5)	-9019	NM_001031839	606553	Hs.545529	NM_001031839		C8orf49	G4DM	chromosome 8 open reading frame 49	protein-coding
46.0667	chr2	18067270	18067610	+	0.233333	NA	Intergenic	Intergenic	188773	NM_002252	3790	Hs.414489	NM_002252	ENSG00000170745	KCNS3	KV9.3	potassium voltage-gated channel modifier subfamily S member 3	protein-coding
81.6332	chr11	4985290	4985701	+	0.233333	NA	Intergenic	Intergenic	-2696	NM_021801	56547	Hs.204732	NM_021801	ENSG00000167346	MMP26	-	matrix metallopeptidase 26	protein-coding
69.3334	chr12	3064458	3064966	+	0.233333	NA	Intergenic	L1MEf|LINE|L1	-12643	NM_001168320	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding
41.6667	chr1	165749380	165749673	+	0.233333	NA	intron (NM_001256164, intron 5 of 6)	AluJo|SINE|Alu	19342	NM_001366129	54499	Hs.31498	NM_019026	ENSG00000143183	TMCO1	HP10122|PCIA3|PNAS-136|TMCC4	transmembrane and coiled-coil domains 1	protein-coding
45.5333-2	chr14	43880872	43881250	+	0.233333	NA	Intergenic	AluSc|SINE|Alu	626222	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
41.1666-3	chr8	118962140	118962529	+	0.233333	NA	intron (NM_001324095, intron 1 of 7)	intron (NM_001324095, intron 1 of 7)	10071	NM_001324095	10584	Hs.176615	NM_006438	ENSG00000184374	COLEC10	3MC3|CL-34|CLL1	collectin subfamily member 10	protein-coding
27.0333-7	chr4	105469763	105469887	+	0.233333	NA	intron (NM_176869, intron 1 of 11)	intron (NM_176869, intron 1 of 11)	4237	NM_176869	27068	Hs.654957	NM_006903	ENSG00000138777	PPA2	HSPC124|SCFAI|SCFI|SID6-306	pyrophosphatase (inorganic) 2	protein-coding
18.1-5	chr14	71259867	71260025	+	0.233333	NA	Intergenic	L1MEf|LINE|L1	-60530	NM_001354289	26037	Hs.654657	NM_015556	ENSG00000197555	SIPA1L1	E6TP1|SPAR1	signal induced proliferation associated 1 like 1	protein-coding
39.5-2	chr2	29804828	29805023	+	0.233333	NA	intron (NM_004304, intron 1 of 28)	LTR47A|LTR|ERVL	116661	NM_004304	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	ALK receptor tyrosine kinase	protein-coding
64.0999	chr3	73735450	73735788	+	0.233333	NA	Intergenic	MER5A|DNA|hAT-Charlie	-73625	NR_146637	105377165		NR_146637		LINC02005	-	long intergenic non-protein coding RNA 2005	ncRNA
57-2	chr3	49648524	49648858	+	0.233333	NA	intron (NM_003458, intron 3 of 11)	intron (NM_003458, intron 3 of 11)	-25660	NM_001640	327	Hs.517969	NM_001640	ENSG00000164062	APEH	AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH	acylaminoacyl-peptide hydrolase	protein-coding
31.5333	chr12	118035478	118035613	+	0.233333	NA	intron (NM_001278557, intron 6 of 8)	intron (NM_001278557, intron 6 of 8)	18842	NM_007370	5985	Hs.731908	NM_007370	ENSG00000111445	RFC5	RFC36	replication factor C subunit 5	protein-coding
37.3333-2	chr2	61521102	61521305	+	0.233333	NA	intron (NM_003400, intron 4 of 24)	intron (NM_003400, intron 4 of 24)	17153	NM_003400	7514	Hs.370770	NM_003400	ENSG00000082898	XPO1	CRM-1|CRM1|emb|exp1	exportin 1	protein-coding
72.3665	chr14	27378362	27378846	+	0.233333	NA	intron (NR_148991, intron 2 of 2)	L1M4|LINE|L1	-233984	NR_039992	100505967	Hs.668484	NR_039992	ENSG00000258548	LINC00645	-	long intergenic non-protein coding RNA 645	ncRNA
64.6666	chr11	17344032	17344489	+	0.233333	NA	Intergenic	Intergenic	-7540	NM_001202439	374383	Hs.146274	NM_001009913	ENSG00000188211	NCR3LG1	B7-H6|B7H6|DKFZp686O24166	natural killer cell cytotoxicity receptor 3 ligand 1	protein-coding
68.9665	chr10	120657520	120657914	+	0.233333	NA	Intergenic	Intergenic	59768	NR_103717	404216	Hs.196578	NM_001012711	ENSG00000177234	LINC01561	C10orf85	long intergenic non-protein coding RNA 1561	ncRNA
95.6665	chr17	64499641	64500234	+	0.233333	NA	TTS (NR_039891)	TTS (NR_039891)	902	NR_039891	100616387		NR_039891	ENSG00000284564	MIR3064	-	microRNA 3064	ncRNA
31.2-20	chr9	123595629	123595858	+	0.233333	NA	intron (NM_001352968, intron 10 of 18)	MIRb|SINE|MIR	-110121	NR_106972	102465688		NR_106972	ENSG00000274932	MIR7150	hsa-mir-7150	microRNA 7150	ncRNA
49.4001-2	chr4	42981714	42982119	+	0.233333	NA	intron (NM_001080476, intron 2 of 3)	L1MA8|LINE|L1	88650	NM_001080476	389207	Hs.162559	NM_001080476	ENSG00000215203	GRXCR1	DFNB25|PPP1R88	glutaredoxin and cysteine rich domain containing 1	protein-coding
43.8-5	chr7	9803495	9803724	+	0.233333	NA	Intergenic	(AATATTT)n|Simple_repeat|Simple_repeat	169339	NR_002790	168741	Hs.545134	NR_002790		PER4	-	period circadian regulator 3 pseudogene	pseudo
28.2333-2	chr1	194932729	194933008	+	0.233333	NA	Intergenic	Intergenic	1155847	NR_146895	105371673		NR_146895		LINC01724	-	long intergenic non-protein coding RNA 1724	ncRNA
36.1333-7	chr3	117377556	117377957	+	0.233333	NA	Intergenic	Intergenic	313169	NR_146652	105374057	Hs.518179	NR_146652	ENSG00000241213	LINC02024	-	long intergenic non-protein coding RNA 2024	ncRNA
41.3999-2	chr21	25814746	25815087	+	0.233333	NA	Intergenic	L1MB2|LINE|L1	-79262	NM_001003697	522	Hs.246310	NM_001685	ENSG00000154723	ATP5PF	ATP5|ATP5A|ATP5J|ATPM|CF6|F6	ATP synthase peripheral stalk subunit F6	protein-coding
58.0999	chr5	4069945	4070281	+	0.233333	NA	Intergenic	MLT1E1|LTR|ERVL-MaLR	474281	NM_024337	79192	Hs.424156	NM_024337	ENSG00000170549	IRX1	IRX-5|IRXA1	iroquois homeobox 1	protein-coding
34.0666	chr1	65830571	65830836	+	0.233333	NA	intron (NM_002600, intron 1 of 16)	L1MC3|LINE|L1	37808	NM_002600	5142	Hs.198072	NM_002600	ENSG00000184588	PDE4B	DPDE4|PDEIVB	phosphodiesterase 4B	protein-coding
54.1334	chr14	62215776	62216114	+	0.233333	NA	Intergenic	Intergenic	-75972	NR_104063	101954204	Hs.607093	NR_104063	ENSG00000259142	LINC00644	-	long intergenic non-protein coding RNA 644	ncRNA
41.3666-3	chr17	73444994	73445211	+	0.233333	NA	intron (NM_001144952, intron 5 of 44)	Charlie5|DNA|hAT-Charlie	-68581	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA
50.4-5	chr20	50516081	50516504	+	0.233333	NA	intron (NM_001278618, intron 1 of 8)	intron (NM_001278618, intron 1 of 8)	5909	NM_002827	5770	Hs.417549	NM_002827	ENSG00000196396	PTPN1	PTP1B	protein tyrosine phosphatase non-receptor type 1	protein-coding
54.8-3	chr17	13693720	13694151	+	0.233333	NA	Intergenic	L1MC3|LINE|L1	-92006	NM_006042	9955	Hs.462270	NM_006042	ENSG00000153976	HS3ST3A1	3-OST-3A|3OST3A1	heparan sulfate-glucosamine 3-sulfotransferase 3A1	protein-coding
29.1333-8	chr5	9561538	9561709	+	0.233333	NA	Intergenic	MLT1J-int|LTR|ERVL-MaLR	12796	NR_003689	100113384		NR_003689		SNORD123	-	small nucleolar RNA, C/D box 123	snoRNA
25.0666	chr10	11067010	11067176	+	0.233333	NA	intron (NM_001326345, intron 1 of 13)	intron (NM_001326345, intron 1 of 13)	38395	NR_046108	439950	Hs.568157	NR_046108		CELF2-AS2	-	CELF2 antisense RNA 2	ncRNA
32.6333-6	chr7	146347151	146347290	+	0.233333	NA	Intergenic	Intergenic	-427051	NM_014141	26047	Hs.655684	NM_014141	ENSG00000174469	CNTNAP2	AUTS15|CASPR2|CDFE|NRXN4|PTHSL1	contactin associated protein like 2	protein-coding
30.9666-2	chr13	109257379	109257599	+	0.233333	NA	Intergenic	Intergenic	-90186	NR_047700	100885782	Hs.655942	NR_047700	ENSG00000236242	MYO16-AS1	-	MYO16 antisense RNA 1	ncRNA
33.2333-8	chr8	92930653	92930864	+	0.233333	NA	intron (NM_001171798, intron 1 of 4)	intron (NM_001171798, intron 1 of 4)	34831	NM_001191036	286144	Hs.440643	NM_001171795	ENSG00000205133	TRIQK	C8orf83|PRO0845|UPF0599	triple QxxK/R motif containing	protein-coding
32.3999	chr1	188435395	188435577	+	0.233333	NA	Intergenic	L1MA3|LINE|L1	991858	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
42.4333-2	chr10	60875351	60875753	+	0.233333	NA	intron (NM_001350906, intron 10 of 12)	intron (NM_001350906, intron 10 of 12)	68633	NM_001350909	9886	Hs.737374	NM_014836	ENSG00000072422	RHOBTB1	-	Rho related BTB domain containing 1	protein-coding
32.1333-8	chr7	39402244	39402495	+	0.233333	NA	intron (NM_001370959, intron 5 of 9)	intron (NM_001370959, intron 5 of 9)	3977	NR_046711	100861520	Hs.571292	NR_046711	ENSG00000224122	POU6F2-AS1	-	POU6F2 antisense RNA 1	ncRNA
37.6-2	chr14	52432286	52432562	+	0.233333	NA	exon (NM_020784, exon 21 of 21)	exon (NM_020784, exon 21 of 21)	118112	NM_000956	5732	Hs.2090	NM_000956	ENSG00000125384	PTGER2	EP2	prostaglandin E receptor 2	protein-coding
56.7999	chr2	45482040	45482385	+	0.233333	NA	intron (NM_018079, intron 15 of 20)	L1MD|LINE|L1	129055	NM_018079	55133	Hs.14229	NM_018079	ENSG00000068784	SRBD1	-	S1 RNA binding domain 1	protein-coding
57.0666	chr10	116887177	116887550	+	0.233333	NA	intron (NM_018330, intron 14 of 14)	intron (NM_018330, intron 14 of 14)	-37641	NM_001330164	259217	Hs.648448	NM_025015	ENSG00000165868	HSPA12A	-	heat shock protein family A (Hsp70) member 12A	protein-coding
46.2	chr16	51079166	51079568	+	0.233333	NA	intron (NR_039672, intron 2 of 6)	intron (NR_039672, intron 2 of 6)	61609	NR_110913	101927334	Hs.555184	NR_110913	ENSG00000261637	LINC02127	-	long intergenic non-protein coding RNA 2127	ncRNA
34.5-3	chr10	122713982	122714274	+	0.233333	NA	Intergenic	Intergenic	-14282	NM_001010912	399814	Hs.363649	NM_001010912	ENSG00000183559	C10orf120	bA318C4.1	chromosome 10 open reading frame 120	protein-coding
63.4001	chr2	168819430	168819876	+	0.233333	NA	intron (NM_001171632, intron 2 of 14)	intron (NM_001171632, intron 2 of 14)	17056	NM_052946	115677	Hs.189780	NM_052946	ENSG00000163072	NOSTRIN	DaIP2	nitric oxide synthase trafficking	protein-coding
56.9001-2	chr1	218324602	218325048	+	0.233333	NA	intron (NM_016052, intron 4 of 4)	HAL1|LINE|L1	-20459	NM_001135599	7042	Hs.133379	NM_003238	ENSG00000092969	TGFB2	G-TSF|LDS4|TGF-beta2	transforming growth factor beta 2	protein-coding
58.0334-3	chr3	97591070	97591565	+	0.233333	NA	intron (NM_001080448, intron 11 of 17)	intron (NM_001080448, intron 11 of 17)	151710	NM_001278300	285220	Hs.272208	NM_173655	ENSG00000080224	EPHA6	EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066	EPH receptor A6	protein-coding
32.6999-2	chr3	94113289	94113519	+	0.233333	NA	intron (NM_022072, intron 5 of 5)	MIR|SINE|MIR	50343	NM_022072	63899	Hs.436594	NM_022072	ENSG00000178694	NSUN3	MST077|MSTP077	NOP2/Sun RNA methyltransferase 3	protein-coding
43.2-3	chr17	49515558	49515865	+	0.233333	NA	TTS (NM_002507)	TTS (NM_002507)	4894	NR_106751	102465141		NR_106751	ENSG00000277478	MIR6165	hsa-mir-6165	microRNA 6165	ncRNA
33.0666-5	chr5	46312762	46313202	+	0.233333	NA	Intergenic	ALR/Alpha|Satellite|centr	-616602	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
74.8666	chr2	13838976	13839365	+	0.233333	NA	Intergenic	MADE1|DNA|TcMar-Mariner	561788	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA
26.0666-7	chr6	24117272	24117627	+	0.233333	NA	Intergenic	Intergenic	-8766	NM_080723	140767	Hs.726270	NM_080723	ENSG00000152954	NRSN1	VMP|p24	neurensin 1	protein-coding
53.9333	chr11	36892031	36892402	+	0.233333	NA	Intergenic	Intergenic	-293937	NM_001243786	5897	Hs.714519	NM_000536	ENSG00000175097	RAG2	RAG-2	recombination activating 2	protein-coding
56.3333	chrX	78027333	78027976	+	0.233333	NA	intron (NM_001282224, intron 13 of 21)	L1PA15-16|LINE|L1	-58016	NM_001029891	441531	Hs.632822	NM_001029891	ENSG00000226784	PGAM4	PGAM-B|PGAM1|PGAM3|dJ1000K24.1	phosphoglycerate mutase family member 4	protein-coding
66.9332-2	chr8	126269347	126269690	+	0.233333	NA	Intergenic	L1MC2|LINE|L1	-55977	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA
27-6	chr12	51302232	51302377	+	0.233333	NA	5' UTR (NM_001290009, exon 4 of 12)	5' UTR (NM_001290009, exon 4 of 12)	21870	NM_016293	51411	Hs.14770	NM_016293	ENSG00000110934	BIN2	BRAP-1	bridging integrator 2	protein-coding
20	chr1	81721100	81721391	+	0.233333	NA	intron (NM_001297704, intron 1 of 20)	Kanga11a|DNA|TcMar-Tc2	21475	NM_001297704	23266	Hs.24212	NM_012302	ENSG00000117114	ADGRL2	CIRL2|CL2|LEC1|LPHH1|LPHN2	adhesion G protein-coupled receptor L2	protein-coding
42.2333	chr10	121485904	121486324	+	0.233333	NA	intron (NR_073009, intron 14 of 16)	intron (NR_073009, intron 14 of 16)	45200	NM_001320654	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding
68.4665	chr9	18182592	18183010	+	0.233333	NA	Intergenic	MIR|SINE|MIR	-291352	NM_052866	92949	Hs.741483	NM_052866	ENSG00000178031	ADAMTSL1	ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN	ADAMTS like 1	protein-coding
30.7-6	chr2	142060442	142060678	+	0.233333	NA	intron (NM_018557, intron 1 of 90)	intron (NM_018557, intron 1 of 90)	71141	NM_018557	53353	Hs.656461	NM_018557	ENSG00000168702	LRP1B	LRP-1B|LRP-DIT|LRPDIT	LDL receptor related protein 1B	protein-coding
50.5333	chr1	75887482	75888069	+	0.233333	NA	intron (NM_002440, intron 15 of 19)	intron (NM_002440, intron 15 of 19)	44629	NR_026546	127247	Hs.125423	NM_080868	ENSG00000154007	ASB17	Asb-17	ankyrin repeat and SOCS box containing 17	protein-coding
42.9333-3	chr3	67143727	67144111	+	0.233333	NA	Intergenic	Intergenic	-81545	NR_036234	100422941		NR_036234	ENSG00000283298	MIR4272	-	microRNA 4272	ncRNA
40.8333-2	chr5	11933540	11933749	+	0.233333	NA	Intergenic	L1MB1|LINE|L1	-29198	NM_001332	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
31.5-7	chr16	59103990	59104179	+	0.233333	NA	Intergenic	Intergenic	-369768	NM_001286220	2806	Hs.599470	NM_002080	ENSG00000125166	GOT2	KAT4|KATIV|KYAT4|mitAAT	glutamic-oxaloacetic transaminase 2	protein-coding
72.6333	chr5	86600417	86600825	+	0.233333	NA	Intergenic	L1MA4A|LINE|L1	-17320	NM_001867	1350	Hs.430075	NM_001867	ENSG00000127184	COX7C	-	cytochrome c oxidase subunit 7C	protein-coding
48.9666	chr19	27575571	27575865	+	0.233333	NA	Intergenic	ALR/Alpha|Satellite|centr	-217713	NR_110691	101927151	Hs.567934	NR_110687	ENSG00000267575	LOC101927151	-	uncharacterized LOC101927151	ncRNA
23.6333-6	chr2	13890456	13890666	+	0.233333	NA	Intergenic	L2c|LINE|L2	510397	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA
26.5333	chr1	236048728	236048937	+	0.233333	NA	exon (NM_002508, exon 2 of 20)	exon (NM_002508, exon 2 of 20)	16258	NM_002508	4811	Hs.356624	NM_002508	ENSG00000116962	NID1	NID	nidogen 1	protein-coding
72.5334-2	chr11	109558904	109559445	+	0.233333	NA	Intergenic	L1PB2|LINE|L1	136984	NM_207645	399947	Hs.172982	NM_207645	ENSG00000185742	C11orf87	LOH11CR1A|NEURIM1	chromosome 11 open reading frame 87	protein-coding
76.9666	chr5	26111397	26112084	+	0.233333	NA	Intergenic	Intergenic	920787	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
45.2666-2	chr1	153533176	153533477	+	0.233333	NA	Intergenic	Intergenic	2665	NM_014624	6277	Hs.275243	NM_014624	ENSG00000197956	S100A6	2A9|5B10|CABP|CACY|PRA|S10A6	S100 calcium binding protein A6	protein-coding
60.7333	chr2	171339064	171339888	+	0.233333	NA	exon (NM_001321156, exon 5 of 11)	exon (NM_001321156, exon 5 of 11)	94514	NM_001321160	79828	Hs.135146	NM_024770	ENSG00000123600	METTL8	TIP	methyltransferase like 8	protein-coding
52.6666-2	chr5	19378128	19378471	+	0.233333	NA	Intergenic	Intergenic	507973	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
47.1666	chr1	51911656	51912048	+	0.233333	NA	3' UTR (NM_002867, exon 5 of 5)	3' UTR (NM_002867, exon 5 of 5)	-32915	NM_001101662	4898	Hs.584782	NM_002525	ENSG00000078618	NRDC	NRD1|hNRD1|hNRD2	nardilysin convertase	protein-coding
52.8999-2	chr5	152983533	152983898	+	0.233333	NA	Intergenic	Intergenic	-11366	NR_109877	101927134	Hs.531423	NR_109877	ENSG00000249484	LINC01470	-	long intergenic non-protein coding RNA 1470	ncRNA
45.6333-3	chr4	77757900	77758236	+	0.233333	NA	intron (NM_001365006, intron 4 of 11)	L1ME2|LINE|L1	60996	NM_001365007	246175	Hs.592519	NM_144571	ENSG00000138767	CNOT6L	CCR4b	CCR4-NOT transcription complex subunit 6 like	protein-coding
50.7333-2	chr9	30347292	30347594	+	0.233333	NA	Intergenic	MER57A-int|LTR|ERV1	61011	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
64.3666	chr11	45793969	45794450	+	0.233333	NA	Intergenic	Intergenic	-9863	NM_001145266	55343	Hs.12211	NM_018389	ENSG00000181830	SLC35C1	CDG2C|FUCT1	solute carrier family 35 member C1	protein-coding
64.6334	chr7	4463624	4464050	+	0.233333	NA	Intergenic	Intergenic	-218458	NM_001037165	221937	Hs.487393	NM_001037165	ENSG00000164916	FOXK1	FOXK1L	forkhead box K1	protein-coding
44.9333-3	chr5	112980474	112980975	+	0.233333	NA	intron (NR_038352, intron 1 of 8)	HAL1ME|LINE|L1	3926	NM_001242377	167227	Hs.443875	NM_152624	ENSG00000172795	DCP2	NUDT20	decapping mRNA 2	protein-coding
49.6666	chr12	22920999	22921270	+	0.233333	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-254502	NR_120471	101928441	Hs.129111	NR_120471	ENSG00000256321	LOC101928441	-	uncharacterized LOC101928441	ncRNA
81.5	chr14	37762745	37763139	+	0.233333	NA	intron (NM_001310135, intron 16 of 32)	AluY|SINE|Alu	-9441	NM_001368142	319089	Hs.659936	NM_001007795	ENSG00000139865	TTC6	C14orf25|NCRNA00291	tetratricopeptide repeat domain 6	protein-coding
58.9666-2	chr10	60963811	60964261	+	0.233333	NA	intron (NM_001350906, intron 2 of 12)	intron (NM_001350906, intron 2 of 12)	-19310	NM_001350905	9886	Hs.737374	NM_014836	ENSG00000072422	RHOBTB1	-	Rho related BTB domain containing 1	protein-coding
39.1-5	chr3	30234300	30234588	+	0.233333	NA	Intergenic	Intergenic	-284424	NR_147054	101928015	Hs.581534	NR_147054		LINC01985	-	long intergenic non-protein coding RNA 1985	ncRNA
65.3999	chr21	27014129	27014470	+	0.233333	NA	Intergenic	Intergenic	-47211	NM_007038	11096	Hs.58324	NM_007038	ENSG00000154736	ADAMTS5	ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2	ADAM metallopeptidase with thrombospondin type 1 motif 5	protein-coding
57.7332	chr10	4532891	4533331	+	0.233333	NA	Intergenic	Intergenic	-123045	NR_015425	338588	Hs.121365	NR_015425		LINC00705	-	long intergenic non-protein coding RNA 705	ncRNA
54.8333-2	chr20	62411577	62411931	+	0.233333	NA	intron (NM_080833, intron 13 of 13)	intron (NM_080833, intron 13 of 13)	-4471	NM_031215	81928	Hs.301040	NM_031215	ENSG00000149679	CABLES2	C20orf150|dJ908M14.2|ik3-2	Cdk5 and Abl enzyme substrate 2	protein-coding
56.0666-3	chr2	23423482	23423902	+	0.233333	NA	intron (NM_052920, intron 1 of 13)	intron (NM_052920, intron 1 of 13)	38513	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding
30.1-11	chr6	34182161	34182344	+	0.233333	NA	Intergenic	Intergenic	-26630	NM_001256809	2914	Hs.429018	NM_000841	ENSG00000124493	GRM4	GPRC1D|MGLUR4|mGlu4	glutamate metabotropic receptor 4	protein-coding
43.8666-7	chr6	105926259	105926620	+	0.233333	NA	Intergenic	Intergenic	-159897	NM_001198	639	Hs.436023	NM_001198	ENSG00000057657	PRDM1	BLIMP1|PRDI-BF1	PR/SET domain 1	protein-coding
41.9-3	chr15	63563451	63563728	+	0.233333	NA	intron (NM_001256702, intron 7 of 13)	intron (NM_001256702, intron 7 of 13)	-33798	NM_203373	283807	Hs.631163	NM_203373	ENSG00000197361	FBXL22	Fbl22	F-box and leucine rich repeat protein 22	protein-coding
41.1333-7	chr4	2129641	2129898	+	0.233333	NA	intron (NM_181808, intron 17 of 25)	intron (NM_181808, intron 17 of 25)	70442	NM_178557	339983	Hs.318529	NM_178557	ENSG00000185818	NAT8L	CML3|NACED|NAT8-LIKE	N-acetyltransferase 8 like	protein-coding
26.1333-6	chr3	173923091	173923466	+	0.233333	NA	intron (NM_001365928, intron 4 of 6)	intron (NM_001365928, intron 4 of 6)	-2482	NR_046664	100874010	Hs.624265	NR_046664	ENSG00000228213	NLGN1-AS1	-	NLGN1 antisense RNA 1	ncRNA
64.1333	chr10	23085816	23086403	+	0.233333	NA	Intergenic	L1ME3Cz|LINE|L1	-9470	NM_012228	22921	Hs.461420	NM_012228	ENSG00000148450	MSRB2	CBS-1|CBS1|CGI-131|MSRB|PILB	methionine sulfoxide reductase B2	protein-coding
50.3333-2	chr5	18717207	18717467	+	0.233333	NA	Intergenic	L1M5|LINE|L1	910063	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
27.2666-3	chr17	63713590	63713773	+	0.233333	NA	intron (NM_001165970, intron 3 of 10)	intron (NM_001165970, intron 3 of 10)	13343	NR_046273	729683	Hs.534931	NR_046273		LOC729683	-	uncharacterized LOC729683	ncRNA
43.7999-2	chr2	8502814	8503080	+	0.233333	NA	Intergenic	Intergenic	80845	NR_110257	101929567	Hs.634706	NR_110257	ENSG00000236008	LINC01814	-	long intergenic non-protein coding RNA 1814	ncRNA
60.0334	chr5	91717802	91718381	+	0.233333	NA	Intergenic	L1ME3|LINE|L1	-334774	NM_020801	57561	Hs.24684	NM_020801	ENSG00000113369	ARRDC3	TLIMP	arrestin domain containing 3	protein-coding
52.6001	chr5	163067944	163068352	+	0.233333	NA	Intergenic	Intergenic	-369423	NM_001364019	900	Hs.79101	NM_004060	ENSG00000113328	CCNG1	CCNG	cyclin G1	protein-coding
29.6666-6	chr5	112008883	112009055	+	0.233333	NA	intron (NR_046678, intron 3 of 3)	intron (NR_046678, intron 3 of 3)	-32037	NM_001142474	9315	Hs.36053	NM_004772	ENSG00000134986	NREP	C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17	neuronal regeneration related protein	protein-coding
38.0666-4	chr2	23826730	23827079	+	0.233333	NA	intron (NR_125717, intron 15 of 28)	intron (NR_125717, intron 15 of 28)	100219	NM_001242338	54454	Hs.467862	NM_017552	ENSG00000119778	ATAD2B	-	ATPase family AAA domain containing 2B	protein-coding
16.7333-19	chr8	83306328	83306561	+	0.233333	NA	Intergenic	Intergenic	-97314	NR_122034	103352670	Hs.399852	NR_122034	ENSG00000253898	LINC01419	LVCAT7|TCONS_00014497	long intergenic non-protein coding RNA 1419	ncRNA
22.0333-4	chr2	52596700	52596889	+	0.233333	NA	Intergenic	MIRb|SINE|MIR	105821	NR_039630	100616431		NR_039630	ENSG00000264975	MIR4431	-	microRNA 4431	ncRNA
42.5333-2	chr2	99026048	99026420	+	0.233333	NA	intron (NM_001349013, intron 13 of 16)	L1MB7|LINE|L1	-90009	NM_207362	343990	Hs.469398	NM_207362	ENSG00000196872	KIAA1211L	C2orf55	KIAA1211 like	protein-coding
70.9333	chr3	94462200	94462756	+	0.233333	NA	Intergenic	Intergenic	399417	NM_022072	63899	Hs.436594	NM_022072	ENSG00000178694	NSUN3	MST077|MSTP077	NOP2/Sun RNA methyltransferase 3	protein-coding
33.6-7	chr4	73340685	73341002	+	0.233333	NA	Intergenic	Intergenic	-63444	NM_000477	213	Hs.418167	NM_000477	ENSG00000163631	ALB	HSA|PRO0883|PRO0903|PRO1341	albumin	protein-coding
37.3333-4	chr4	45464336	45464645	+	0.233333	NA	Intergenic	AluSz6|SINE|Alu	659564	NM_173536	2565	Hs.375051	NM_173536	ENSG00000163285	GABRG1	-	gamma-aminobutyric acid type A receptor gamma1 subunit	protein-coding
69.9001	chr2	98229376	98229750	+	0.233333	NA	intron (NR_144297, intron 15 of 18)	intron (NR_144297, intron 15 of 18)	80030	NM_001345864	200403	Hs.269977	NM_144992	ENSG00000168658	VWA3B	SCAR22	von Willebrand factor A domain containing 3B	protein-coding
79.8333	chr4	46501030	46501679	+	0.233333	NA	Intergenic	Intergenic	-111226	NM_000807	2555	Hs.48372	NM_000807	ENSG00000151834	GABRA2	-	gamma-aminobutyric acid type A receptor alpha2 subunit	protein-coding
40.0999	chr5	38933852	38934161	+	0.233333	NA	3' UTR (NM_001323505, exon 18 of 18)	3' UTR (NM_001323505, exon 18 of 18)	87994	NM_001323506	9180	Hs.120658	NM_003999	ENSG00000145623	OSMR	IL-31R-beta|IL-31RB|OSMRB|PLCA1	oncostatin M receptor	protein-coding
49	chr1	107685606	107685950	+	0.233333	NA	intron (NM_006113, intron 18 of 26)	intron (NM_006113, intron 18 of 26)	2721	NM_001079874	10451	Hs.267659	NM_006113	ENSG00000134215	VAV3	-	vav guanine nucleotide exchange factor 3	protein-coding
36.1-3	chr5	141632756	141633047	+	0.233333	NA	intron (NR_149166, intron 2 of 12)	intron (NR_149166, intron 2 of 12)	3948	NM_003883	8841	Hs.519632	NM_003883	ENSG00000171720	HDAC3	HD3|KDAC3|RPD3|RPD3-2	histone deacetylase 3	protein-coding
45.7666-2	chr17	71978730	71978964	+	0.233333	NA	Intergenic	Intergenic	47132	NR_110876	102723505	Hs.547482	NR_110876		ROCR	LINC02095	regulator of chondrogenesis RNA	ncRNA
56.1999-3	chr8	91617683	91618048	+	0.233333	NA	Intergenic	Intergenic	368546	NM_052832	115111	Hs.354013	NM_052832	ENSG00000147606	SLC26A7	SUT2	solute carrier family 26 member 7	protein-coding
25.7333-2	chr1	117443334	117443472	+	0.233333	NA	intron (NM_006699, intron 6 of 12)	intron (NM_006699, intron 6 of 12)	75954	NM_006699	10905	Hs.435938	NM_006699	ENSG00000198162	MAN1A2	MAN1B	mannosidase alpha class 1A member 2	protein-coding
78.6	chr4	44009704	44010225	+	0.233333	NA	Intergenic	Intergenic	-6897	NR_131959	100506827	Hs.156197	NR_131958	ENSG00000251350	LINC02475	LVCAT1	long intergenic non-protein coding RNA 2475	ncRNA
23.7667-9	chr2	41485363	41485519	+	0.233333	NA	Intergenic	Intergenic	-392114	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA
31.5333-8	chr8	4091687	4091949	+	0.233333	NA	intron (NM_033225, intron 3 of 69)	intron (NM_033225, intron 3 of 69)	903096	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding
28.0666-2	chr2	60245083	60245302	+	0.233333	NA	Intergenic	Intergenic	137844	NR_132991	106660609	Hs.565545	NR_132991	ENSG00000228590	MIR4432HG	-	MIR4432 host gene	ncRNA
38.2666-2	chr14	32990784	32990956	+	0.233333	NA	intron (NM_001165893, intron 1 of 10)	AluJr|SINE|Alu	51991	NM_001164749	64067	Hs.657892	NM_022123	ENSG00000151322	NPAS3	MOP6|PASD6|bHLHe12	neuronal PAS domain protein 3	protein-coding
92.3668	chr19	28570028	28570742	+	0.233333	NA	intron (NR_110759, intron 5 of 9)	intron (NR_110759, intron 5 of 9)	-36303	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA
38.5	chr1	74296494	74296746	+	0.233333	NA	intron (NM_015978, intron 5 of 24)	L1MEg|LINE|L1	61233	NM_015978	51086	Hs.480085	NM_015978	ENSG00000116783	TNNI3K	CARK|CCDD	TNNI3 interacting kinase	protein-coding
26.8666-2	chr11	78104014	78104143	+	0.233333	NA	intron (NM_001007027, intron 11 of 13)	intron (NM_001007027, intron 11 of 13)	-24216	NM_001203261	100532726	Hs.407860	NM_001203260	ENSG00000259112	NDUFC2-KCTD14	-	NDUFC2-KCTD14 readthrough	protein-coding
64.0001-2	chr3	39224489	39225037	+	0.233333	NA	Intergenic	L2a|LINE|L2	-32168	NM_001198621	165904	Hs.447868	NM_194293	ENSG00000168334	XIRP1	CMYA1|Xin	xin actin binding repeat containing 1	protein-coding
72.6001	chr1	44072675	44073332	+	0.233333	NA	Intergenic	L2|LINE|L2	-41541	NM_001328626	6536	Hs.442590	NM_006934	ENSG00000196517	SLC6A9	GCENSG|GLYT1	solute carrier family 6 member 9	protein-coding
27.1333	chr1	38361724	38361911	+	0.233333	NA	Intergenic	Intergenic	-113379	NR_146761	105378656	Hs.128924	NR_146761	ENSG00000238063	LINC01685	-	long intergenic non-protein coding RNA 1685	ncRNA
50.5666-2	chr13	90136961	90137327	+	0.233333	NA	Intergenic	Intergenic	-17427	NR_047489	100874187	Hs.564526	NR_047489	ENSG00000261446	LINC00559	-	long intergenic non-protein coding RNA 559	ncRNA
68.9333	chr12	25160929	25161380	+	0.233333	NA	non-coding (NR_147910, exon 2 of 12)	non-coding (NR_147910, exon 2 of 12)	34006	NM_001319978	55259	Hs.407771	NM_018272	ENSG00000118307	CASC1	LAS1|PPP1R54	cancer susceptibility 1	protein-coding
39.9333-5	chr20	25319096	25319293	+	0.233333	NA	intron (NM_001042472, intron 4 of 12)	intron (NM_001042472, intron 4 of 12)	71109	NM_002862	5834	Hs.368157	NM_002862	ENSG00000100994	PYGB	GPBB	glycogen phosphorylase B	protein-coding
56.0666	chr11	128214393	128214762	+	0.233333	NA	intron (NR_146647, intron 3 of 3)	LTR12C|LTR|ERV1	5811	NR_146647	105369564	Hs.591937	NR_146647	ENSG00000272575	LINC02098	-	long intergenic non-protein coding RNA 2098	ncRNA
45.7666-4	chr2	39736862	39737365	+	0.233333	NA	intron (NR_135664, intron 11 of 11)	intron (NR_135664, intron 11 of 11)	42145	NM_025264	80745	Hs.468254	NM_025264	ENSG00000138050	THUMPD2	C2orf8	THUMP domain containing 2	protein-coding
37.8-3	chr12	62358111	62358437	+	0.233333	NA	intron (NR_147080, intron 6 of 19)	intron (NR_147080, intron 6 of 19)	97870	NM_001351166	9958	Hs.434951	NM_006313	ENSG00000135655	USP15	UNPH-2|UNPH4	ubiquitin specific peptidase 15	protein-coding
40.3333-5	chr6	84573795	84574163	+	0.233333	NA	Intergenic	L1PA17|LINE|L1	-99050	NR_132100	105377880	Hs.171384	NR_132100	ENSG00000231776	LINC01611	TCONS_l2_00025430	long intergenic non-protein coding RNA 1611	ncRNA
41.5999-2	chr11	132696858	132697078	+	0.233333	NA	intron (NM_001319104, intron 1 of 6)	HAL1ME|LINE|L1	246669	NM_001319103	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding
31.0999-4	chr8	5868462	5868617	+	0.233333	NA	Intergenic	Intergenic	538009	NR_040040	100287015	Hs.156928	NR_040040	ENSG00000246089	LOC100287015	-	uncharacterized LOC100287015	ncRNA
58.9333	chr5	161255995	161256512	+	0.233333	NA	Intergenic	Intergenic	291871	NM_021911	2561	Hs.303527	NM_000813	ENSG00000145864	GABRB2	ICEE2	gamma-aminobutyric acid type A receptor beta2 subunit	protein-coding
40.6666-3	chr5	33748886	33749178	+	0.233333	NA	intron (NM_001324512, intron 3 of 21)	intron (NM_001324512, intron 3 of 21)	142958	NM_001324511	81792	Hs.12680	NM_030955	ENSG00000151388	ADAMTS12	PRO4389	ADAM metallopeptidase with thrombospondin type 1 motif 12	protein-coding
69.1334	chr17	69989797	69990307	+	0.233333	NA	Intergenic	LTR49-int|LTR|ERV1	28345	NR_110875	102723487	Hs.451409	NR_110874	ENSG00000237560	LINC01497	-	long intergenic non-protein coding RNA 1497	ncRNA
49.3-2	chrX	28222560	28222808	+	0.233333	NA	Intergenic	Intergenic	-241235	NM_001017930	139425	Hs.447365	NM_001017930	ENSG00000226372	DCAF8L1	WDR42B	DDB1 and CUL4 associated factor 8 like 1	protein-coding
27.4667-8	chr22	48142528	48142748	+	0.233333	NA	Intergenic	Intergenic	-131726	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA
94.6334	chr17	69318670	69319348	+	0.233333	NA	intron (NM_172232, intron 1 of 38)	intron (NM_172232, intron 1 of 38)	-3376	NM_018672	23461	Hs.731824	NM_018672	ENSG00000154265	ABCA5	ABC13|EST90625|HTC3	ATP binding cassette subfamily A member 5	protein-coding
58.1667	chr12	16998099	16998598	+	0.233333	NA	Intergenic	L1P1|LINE|L1	9601	NR_036619	728622	Hs.741380	NR_036619		SKP1P2	SKP1B|p19B	S-phase kinase associated protein 1 pseudogene 2	pseudo
13.2-15	chrX	148520839	148520970	+	0.233333	NA	intron (NM_001169124, intron 1 of 19)	intron (NM_001169124, intron 1 of 19)	20287	NM_002025	2334	Hs.496911	NM_002025	ENSG00000155966	AFF2	FMR2|FMR2P|FRAXE|MRX2|OX19	AF4/FMR2 family member 2	protein-coding
33.4-2	chr14	64528952	64529152	+	0.233333	NA	intron (NM_014950, intron 2 of 2)	intron (NM_014950, intron 2 of 2)	11316	NR_110550	102723809	Hs.667192	NR_110550	ENSG00000259116	LOC102723809	-	uncharacterized LOC102723809	ncRNA
32.9333-6	chr4	107126072	107126226	+	0.233333	NA	Intergenic	Intergenic	-89836	NM_014421	27123	Hs.211869	NM_014421	ENSG00000155011	DKK2	DKK-2	dickkopf WNT signaling pathway inhibitor 2	protein-coding
27.4333-9	chr5	44492156	44492412	+	0.233333	NA	Intergenic	LTR27E|LTR|ERV1	17998	NR_131946	102723839	Hs.561412	NR_131946		LINC02224	BRCAT107	long intergenic non-protein coding RNA 2224	ncRNA
39.2666-8	chrX	94633097	94633381	+	0.233333	NA	Intergenic	Intergenic	429987	NR_031667	100313772		NR_031667	ENSG00000221187	MIR548M	MIRN548M	microRNA 548m	ncRNA
47.5666	chr6	55536669	55537038	+	0.233333	NA	intron (NM_001287746, intron 4 of 9)	intron (NM_001287746, intron 4 of 9)	42361	NM_019036	54511	Hs.147054	NM_019036	ENSG00000146151	HMGCLL1	bA418P12.1|er-cHL	3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1	protein-coding
45.7999-2	chr2	186177070	186177302	+	0.233333	NA	Intergenic	AluJr|SINE|Alu	-90869	NR_110218	101927217	Hs.130011	NR_110218	ENSG00000237877	LINC01473	-	long intergenic non-protein coding RNA 1473	ncRNA
30.5-4	chr1	173889715	173889872	+	0.233333	NA	3' UTR (NM_001346115, exon 4 of 4)	3' UTR (NM_001346115, exon 4 of 4)	-20911	NR_152521	60674	Hs.531856	NR_002578	ENSG00000234741	GAS5	NCRNA00030|SNHG2	growth arrest specific 5	ncRNA
34.3-6	chr6	67247486	67247954	+	0.233333	NA	Intergenic	Intergenic	-807631	NR_125869	102723883	Hs.566528	NR_125869	ENSG00000223504	LOC102723883	-	uncharacterized LOC102723883	ncRNA
31.1667-3	chr8	6141304	6141545	+	0.233333	NA	Intergenic	Intergenic	265124	NR_040040	100287015	Hs.156928	NR_040040	ENSG00000246089	LOC100287015	-	uncharacterized LOC100287015	ncRNA
41.7-6	chr4	44295667	44295937	+	0.233333	NA	intron (NM_198353, intron 1 of 1)	MSTD|LTR|ERVL-MaLR	153007	NM_198353	386617	Hs.479644	NM_198353	ENSG00000183783	KCTD8	-	potassium channel tetramerization domain containing 8	protein-coding
21.7666	chr11	84072137	84072246	+	0.233333	NA	intron (NM_001142699, intron 10 of 27)	intron (NM_001142699, intron 10 of 27)	201089	NM_001142700	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
40.1333-2	chr12	66792855	66793176	+	0.233333	NA	intron (NM_001366724, intron 1 of 23)	intron (NM_001366724, intron 1 of 23)	11254	NM_001366724	23426	Hs.505946	NM_021150	ENSG00000155974	GRIP1	FRASRS3|GRIP	glutamate receptor interacting protein 1	protein-coding
51.3666-2	chr8	123463014	123463406	+	0.233333	NA	Intergenic	L1MC4|LINE|L1	46436	NM_018024	55093	Hs.18029	NM_018024	ENSG00000156795	WDYHV1	C8orf32	WDYHV motif containing 1	protein-coding
39.2666-7	chr8	125543835	125544216	+	0.2	NA	Intergenic	Kanga1d|DNA|TcMar-Tc2	111816	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding
73.2668	chr12	60098335	60098761	+	0.2	NA	Intergenic	L1P1|LINE|L1	409178	NR_073056	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
56.9	chr3	19700042	19700394	+	0.2	NA	Intergenic	Intergenic	233999	NM_144715	151651	Hs.733920	NM_144715	ENSG00000163576	EFHB	CFAP21	EF-hand domain family member B	protein-coding
23.6-24	chr9	34064243	34064475	+	0.2	NA	Intergenic	MER2|DNA|TcMar-Tigger	-15160	NM_001370059	55833	Hs.493739	NM_018449	ENSG00000137073	UBAP2	UBAP-2	ubiquitin associated protein 2	protein-coding
26.9-12	chr5	84636993	84637226	+	0.2	NA	Intergenic	Intergenic	-252229	NM_005711	10085	Hs.482730	NM_005711	ENSG00000164176	EDIL3	DEL1	EGF like repeats and discoidin domains 3	protein-coding
40-5	chr10	74231017	74231521	+	0.2	NA	intron (NM_001369124, intron 3 of 9)	intron (NM_001369124, intron 3 of 9)	54506	NM_001369124	132	Hs.656586	NM_001123	ENSG00000156110	ADK	AK	adenosine kinase	protein-coding
31.8333-4	chr4	31132461	31132826	+	0.2	NA	intron (NM_001173523, intron 2 of 2)	intron (NM_001173523, intron 2 of 2)	-38501	NR_125935	102723778	Hs.210739	NR_125935	ENSG00000251182	LINC02497	-	long intergenic non-protein coding RNA 2497	ncRNA
49.9-3	chr6	35495264	35495746	+	0.2	NA	intron (NM_003214, intron 1 of 12)	intron (NM_003214, intron 1 of 12)	1574	NM_003214	7005	Hs.485205	NM_003214	ENSG00000007866	TEAD3	DTEF-1|ETFR-1|TEAD-3|TEAD5|TEF-5|TEF5	TEA domain transcription factor 3	protein-coding
50.5666	chr11	60522229	60522591	+	0.2	NA	intron (NM_001278320, intron 3 of 4)	L2a|LINE|L2	7018	NM_001100909	503497	Hs.523704	NM_001012417	ENSG00000204979	MS4A13	-	membrane spanning 4-domains A13	protein-coding
53.8	chr13	50201203	50201619	+	0.2	NA	intron (NR_109974, intron 2 of 6)	intron (NR_109974, intron 2 of 6)	29393	NR_002183	145165	Hs.511834	NM_153290		ST13P4	FAM10A4|FAM10A4P	ST13, Hsp70 interacting protein pseudogene 4	pseudo
49.2	chr10	108236814	108237222	+	0.2	NA	Intergenic	Intergenic	-167725	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
44.6666-3	chr20	48300456	48300919	+	0.2	NA	Intergenic	Intergenic	-59224	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA
38.8333-2	chr3	153644686	153645275	+	0.2	NA	intron (NR_146713, intron 3 of 6)	L1PBa1|LINE|L1	117546	NR_146713	105374165	Hs.637991	NR_146713		LINC02006	-	long intergenic non-protein coding RNA 2006	ncRNA
43.1001	chr14	69734792	69735123	+	0.2	NA	Intergenic	Zaphod3|DNA|hAT-Tip100	-32185	NM_001320214	6430	Hs.632326	NM_006925	ENSG00000100650	SRSF5	HRS|SFRS5|SRP40	serine and arginine rich splicing factor 5	protein-coding
26.2-11	chr2	115623519	115623719	+	0.2	NA	intron (NM_001321912, intron 6 of 25)	intron (NM_001321912, intron 6 of 25)	279804	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
65.8666	chr2	32214002	32214387	+	0.2	NA	intron (NM_001330476, intron 10 of 10)	AluSx3|SINE|Alu	48330	NM_001330477	55676	Hs.23248	NM_017964	ENSG00000152683	SLC30A6	MST103|MSTP103|ZNT6	solute carrier family 30 member 6	protein-coding
35.3667-7	chr7	112261185	112261550	+	0.2	NA	intron (NM_021994, intron 1 of 11)	intron (NM_021994, intron 1 of 11)	54672	NM_021994	11179	Hs.655904	NM_021994	ENSG00000198839	ZNF277	NRIF4|ZNF277P	zinc finger protein 277	protein-coding
121.933	chr2	78684185	78685382	+	0.2	NA	Intergenic	L1PB3|LINE|L1	139252	NR_136312	105374820	Hs.570225	NR_136311		LOC105374820	-	uncharacterized LOC105374820	ncRNA
22-10	chr5	8638749	8638954	+	0.2	NA	Intergenic	MIR|SINE|MIR	177926	NR_039663	100616142		NR_039663	ENSG00000284000	MIR4458	mir-4458	microRNA 4458	ncRNA
38.3334-2	chr2	229058496	229058766	+	0.2	NA	intron (NM_001330157, intron 1 of 1)	intron (NM_001330157, intron 1 of 1)	173461	NM_001330156	55022	Hs.745038	NM_017933	ENSG00000153823	PID1	HMFN2073|NYGGF4|P-CLI1|PCLI1	phosphotyrosine interaction domain containing 1	protein-coding
51.0667-2	chr1	227254907	227255280	+	0.2	NA	intron (NM_001366019, intron 1 of 36)	intron (NM_001366019, intron 1 of 36)	63399	NM_014826	8476	Hs.35433	NM_003607	ENSG00000143776	CDC42BPA	MRCK|MRCKA|PK428	CDC42 binding protein kinase alpha	protein-coding
18.1333-10	chr2	2253182	2253431	+	0.2	NA	intron (NM_015025, intron 2 of 24)	intron (NM_015025, intron 2 of 24)	-65926	NR_024468	730811	Hs.629472	NR_024468	ENSG00000225619	MYT1L-AS1	-	MYT1L antisense RNA 1	ncRNA
34.7-3	chr11	33043554	33043772	+	0.2	NA	intron (NM_001145541, intron 1 of 9)	MIR3|SINE|MIR	3648	NM_001145541	55346	Hs.655341	NM_018393	ENSG00000176148	TCP11L1	dJ85M6.3	t-complex 11 like 1	protein-coding
38.9333-2	chr12	93591810	93592112	+	0.2	NA	Intergenic	Intergenic	19286	NM_001270471	8835	Hs.485572	NM_003877	ENSG00000120833	SOCS2	CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2	suppressor of cytokine signaling 2	protein-coding
71.3332	chr6	51524622	51525068	+	0.2	NA	Intergenic	Intergenic	-97025	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
25.3667-7	chr9	25335399	25335558	+	0.2	NA	Intergenic	L1ME4a|LINE|L1	343380	NM_001004125	286319	Hs.26268	NM_001004125	ENSG00000198680	TUSC1	CCDC89B|TSG-9|TSG9	tumor suppressor candidate 1	protein-coding
36.3333-2	chr3	73962340	73962601	+	0.2	NA	Intergenic	Intergenic	153226	NR_146637	105377165		NR_146637		LINC02005	-	long intergenic non-protein coding RNA 2005	ncRNA
42.6-2	chr10	86123915	86124330	+	0.2	NA	intron (NM_017551, intron 4 of 15)	intron (NM_017551, intron 4 of 15)	140666	NR_029907	442911		NR_029907	ENSG00000199104	MIR346	MIRN346|hsa-mir-346|miR-346|miRNA346	microRNA 346	ncRNA
26.6333-2	chr1	184754573	184754886	+	0.2	NA	non-coding (NR_135118, exon 1 of 21)	non-coding (NR_135118, exon 1 of 21)	129	NM_025191	80267	Hs.523811	NM_025191	ENSG00000116406	EDEM3	C1orf22	ER degradation enhancing alpha-mannosidase like protein 3	protein-coding
25.6-6	chr20	63002807	63003021	+	0.2	NA	Intergenic	Intergenic	4050	NM_080606	128408	Hs.551230	NM_080606	ENSG00000125533	BHLHE23	BETA4|BHLHB4|Beta3b|bA305P22.3	basic helix-loop-helix family member e23	protein-coding
55.9-3	chr7	132894337	132894738	+	0.2	NA	intron (NM_001317177, intron 4 of 8)	L2b|LINE|L2	135567	NR_134332	100506937	Hs.98247	NR_134332	ENSG00000225881	LOC100506937	-	uncharacterized LOC100506937	ncRNA
46-2	chr4	112325816	112326121	+	0.2	NA	intron (NM_001102406, intron 2 of 15)	intron (NM_001102406, intron 2 of 15)	28599	NM_001102406	80216	Hs.652825	NM_025144	ENSG00000073331	ALPK1	8430410J10Rik|LAK	alpha kinase 1	protein-coding
25.2-8	chr19	28799925	28800194	+	0.2	NA	Intergenic	L1PA16|LINE|L1	-72365	NR_110759	100420587	Hs.569956	NR_110759	ENSG00000283403	LOC100420587	-	SHC binding and spindle associated 1 pseudogene	pseudo
41.6-4	chr16	85551083	85551310	+	0.2	NA	Intergenic	Intergenic	-60213	NM_001134473	23199	Hs.461647	NM_014615	ENSG00000131149	GSE1	CRHSP24|KIAA0182	Gse1 coiled-coil protein	protein-coding
58.2668	chr6	81477080	81477414	+	0.2	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	275434	NM_017633	55603	Hs.10784	NM_017633	ENSG00000112773	TENT5A	C6orf37|FAM46A|OI18|XTP11	terminal nucleotidyltransferase 5A	protein-coding
66.5333	chr6	147881855	147882540	+	0.2	NA	Intergenic	Intergenic	373507	NM_001030060	389432	Hs.567973	NM_001030060	ENSG00000203727	SAMD5	dJ875H10.1	sterile alpha motif domain containing 5	protein-coding
35.5333	chr1	111771523	111771825	+	0.2	NA	Intergenic	Intergenic	15773	NM_007204	11218	Hs.591405	NM_007204	ENSG00000064703	DDX20	DP103|GEMIN3	DEAD-box helicase 20	protein-coding
29.9334	chr2	138754114	138754290	+	0.2	NA	intron (NM_007226, intron 1 of 1)	L1MC3|LINE|L1	26188	NM_007226	11249	Hs.435019	NM_007226	ENSG00000144227	NXPH2	NPH2	neurexophilin 2	protein-coding
47.6-4	chr2	51666709	51667292	+	0.2	NA	intron (NR_135237, intron 5 of 10)	intron (NR_135237, intron 5 of 10)	634399	NR_135237	730100	Hs.640140	NR_135237	ENSG00000231918	LOC730100	-	uncharacterized LOC730100	ncRNA
40.6667-2	chr11	3657754	3657996	+	0.2	NA	intron (NM_004314, intron 1 of 4)	L1ME3G|LINE|L1	12747	NM_004314	417	Hs.382188	NM_004314	ENSG00000129744	ART1	ART2|ARTC1|CD296|RT6	ADP-ribosyltransferase 1	protein-coding
45.9999-2	chr22	29849726	29850114	+	0.2	NA	Intergenic	L2b|LINE|L2	-11646	NM_001369920	84164	Hs.731754	NM_032204	ENSG00000100325	ASCC2	ASC1p100|p100	activating signal cointegrator 1 complex subunit 2	protein-coding
17.3667	chr1	1012546	1012632	+	0.2	NA	promoter-TSS (NM_005101)	promoter-TSS (NM_005101)	-908	NM_005101	9636	Hs.458485	NM_005101	ENSG00000187608	ISG15	G1P2|IFI15|IMD38|IP17|UCRP|hUCRP	ISG15 ubiquitin like modifier	protein-coding
33.6-2	chr12	126897215	126897448	+	0.2	NA	Intergenic	Intergenic	-22641	NR_033970	440117	Hs.127100	NR_033970	ENSG00000249873	LINC02372	-	long intergenic non-protein coding RNA 2372	ncRNA
35.5333-3	chr12	17957065	17957280	+	0.2	NA	Intergenic	L1MA9|LINE|L1	133021	NM_001286201	79785	Hs.732831	NM_024730	ENSG00000111404	RERGL	-	RERG like	protein-coding
55.1333	chr3	103112469	103112985	+	0.2	NA	Intergenic	L1MA2|LINE|L1	411389	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
20.4-3	chr10	63017249	63017437	+	0.2	NA	Intergenic	LTR16C|LTR|ERVL	-115904	NM_001282405	29982	Hs.449628	NM_030759	ENSG00000148572	NRBF2	COPR|COPR1|COPR2|NRBF-2	nuclear receptor binding factor 2	protein-coding
40.3-9	chr9	4507326	4507654	+	0.2	NA	intron (NM_004170, intron 1 of 11)	intron (NM_004170, intron 1 of 11)	17022	NM_004170	6505	Hs.444915	NM_004170	ENSG00000106688	SLC1A1	DCBXA|EAAC1|EAAT3|SCZD18	solute carrier family 1 member 1	protein-coding
47.3-4	chr2	118261971	118262379	+	0.2	NA	Intergenic	Intergenic	-75789	NR_144530	100506797	Hs.116176	NR_144530	ENSG00000226856	THORLNC	THOR	testis associated oncogenic lncRNA	ncRNA
21.5-3	chr11	92773559	92773693	+	0.2	NA	intron (NM_001008781, intron 5 of 24)	intron (NM_001008781, intron 5 of 24)	142002	NR_135091	105369431	Hs.532389	NR_135091		LINC02746	-	long intergenic non-protein coding RNA 2746	ncRNA
42.9	chr12	8112402	8112747	+	0.2	NA	Intergenic	L1MC|LINE|L1	-11058	NM_016184	50856	Hs.504657	NM_016184	ENSG00000111729	CLEC4A	CD367|CLECSF6|DCIR|DDB27|HDCGC13P|LLIR	C-type lectin domain family 4 member A	protein-coding
25.3667	chr2	143185081	143185321	+	0.2	NA	intron (NM_018460, intron 2 of 13)	intron (NM_018460, intron 2 of 13)	55782	NM_018460	55843	Hs.171011	NM_018460	ENSG00000075884	ARHGAP15	BM046	Rho GTPase activating protein 15	protein-coding
50.7667-2	chr12	83132345	83133064	+	0.2	NA	3' UTR (NM_001320321, exon 11 of 11)	3' UTR (NM_001320321, exon 11 of 11)	445549	NM_001320322	160335	Hs.577775	NM_152588	ENSG00000179104	TMTC2	IBDBP1	transmembrane O-mannosyltransferase targeting cadherins 2	protein-coding
89.8332	chr12	12590955	12591960	+	0.2	NA	Intergenic	AluY|SINE|Alu	-20419	NM_001310	1389	Hs.591156	NM_001310	ENSG00000111269	CREBL2	-	cAMP responsive element binding protein like 2	protein-coding
31.9333-5	chr2	29696994	29697212	+	0.2	NA	intron (NM_004304, intron 2 of 28)	intron (NM_004304, intron 2 of 28)	-221726	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA
39.7-7	chr4	39701179	39701517	+	0.2	NA	intron (NM_001111113, intron 1 of 4)	intron (NM_001111113, intron 1 of 4)	3212	NM_001312646	3093	Hs.50308	NM_005339	ENSG00000078140	UBE2K	E2-25K|HIP2|HYPG|LIG|UBC1	ubiquitin conjugating enzyme E2 K	protein-coding
21.9333-6	chr12	12217514	12217706	+	0.2	NA	intron (NM_002336, intron 2 of 22).2	L1M4|LINE|L1	49434	NM_002336	4040	Hs.584775	NM_002336	ENSG00000070018	LRP6	ADCAD2|STHAG7	LDL receptor related protein 6	protein-coding
56.6	chr14	55159394	55159933	+	0.2	NA	intron (NM_001146015, intron 13 of 19)	intron (NM_001146015, intron 13 of 19)	22680	NR_003225	3958	Hs.531081	NM_002306	ENSG00000131981	LGALS3	CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2	galectin 3	protein-coding
31.5667-2	chr2	27479556	27480067	+	0.2	NA	intron (NM_015662, intron 9 of 47)	intron (NM_015662, intron 9 of 47)	9932	NM_015662	26160	Hs.127401	NM_015662	ENSG00000138002	IFT172	BBS20|NPHP17|RP71|SLB|SRTD10|osm-1|wim	intraflagellar transport 172	protein-coding
45-6	chr7	97831792	97832068	+	0.2	NA	Intergenic	Intergenic	40235	NM_001178077	440	Hs.489207	NM_001673	ENSG00000070669	ASNS	ASNSD|TS11	asparagine synthetase (glutamine-hydrolyzing)	protein-coding
38.3-2	chr18	75106205	75106485	+	0.2	NA	Intergenic	Intergenic	99168	NM_001306093	284273	Hs.465433	NM_175907	ENSG00000180011	ZADH2	PRG-3	zinc binding alcohol dehydrogenase domain containing 2	protein-coding
72.5333	chr11	5689116	5689575	+	0.2	NA	promoter-TSS (NM_006074)	promoter-TSS (NM_006074)	-445	NM_001199573	10346	Hs.501778	NM_006074	ENSG00000132274	TRIM22	GPSTAF50|RNF94|STAF50	tripartite motif containing 22	protein-coding
43.7667	chr4	53943967	53944556	+	0.2	NA	Intergenic	Intergenic	43021	NR_027153	402176	Hs.452943	NM_001011538		RPL21P44	RPL21_17_477	ribosomal protein L21 pseudogene 44	pseudo
45.0667-2	chr5	9694162	9694673	+	0.2	NA	intron (NR_027112, intron 9 of 12)	intron (NR_027112, intron 9 of 12)	-64066	NM_019599	50834	Hs.567492	NM_019599	ENSG00000169777	TAS2R1	T2R1|TRB7	taste 2 receptor member 1	protein-coding
38.2667	chr18	13884044	13884422	+	0.2	NA	3' UTR (NM_000529, exon 2 of 2)	3' UTR (NM_000529, exon 2 of 2)	31303	NM_000529	4158	Hs.248144	NM_000529	ENSG00000185231	MC2R	ACTHR	melanocortin 2 receptor	protein-coding
66.3668	chr12	31661691	31662179	+	0.2	NA	5' UTR (NM_001135863, exon 2 of 4)	5' UTR (NM_001135863, exon 2 of 4)	2247	NM_001135863	254013	Hs.740628	NM_173802	ENSG00000139160	ETFBKMT	C12orf72|ETFB-KMT|METTL20	electron transfer flavoprotein subunit beta lysine methyltransferase	protein-coding
43.7-3	chrX	25518355	25518900	+	0.2	NA	Intergenic	Intergenic	-502662	NM_139058	170302	Hs.300304	NM_139058	ENSG00000004848	ARX	CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS	aristaless related homeobox	protein-coding
17.8-12	chr3	86690926	86691174	+	0.2	NA	Intergenic	L1MA1|LINE|L1	209107	NR_135563	101927494	Hs.385622	NR_135563	ENSG00000241328	LINC02070	-	long intergenic non-protein coding RNA 2070	ncRNA
95.9	chr4	61481496	61482101	+	0.2	NA	intron (NM_001371343, intron 2 of 23)	intron (NM_001371343, intron 2 of 23)	279626	NM_001371342								
19.8-17	chr3	193581918	193582048	+	0.2	NA	Intergenic	Intergenic	-11161	NM_015560	4976	Hs.594504	NM_015560	ENSG00000198836	OPA1	BERHS|MGM1|MTDPS14|NPG|NTG|largeG	OPA1 mitochondrial dynamin like GTPase	protein-coding
38.5001-2	chr12	10627237	10627526	+	0.2	NA	intron (NM_018423, intron 7 of 10)	intron (NM_018423, intron 7 of 10)	-13772	NR_135120	55110	Hs.104650	NM_018048	ENSG00000111196	MAGOHB	MGN2|mago|magoh	mago homolog B, exon junction complex subunit	protein-coding
65.7333	chr4	72134799	72135392	+	0.2	NA	intron (NM_053036, intron 2 of 3)	HAL1|LINE|L1	95963	NM_053036	10886	Hs.99231	NM_004885	ENSG00000056291	NPFFR2	GPR74|HLWAR77|NPFF2|NPGPR	neuropeptide FF receptor 2	protein-coding
24.6667-9	chr3	184423658	184423854	+	0.2	NA	intron (NR_161199, intron 2 of 3)	intron (NR_161199, intron 2 of 3)	22219	NR_161199	105374250	Hs.129464	NR_161198		LINC02054	-	long intergenic non-protein coding RNA 2054	ncRNA
19.2667-14	chrX	69283749	69283885	+	0.2	NA	Intergenic	MIRb|SINE|MIR	104260	NR_103715	100996279		NR_103715	ENSG00000215162	LINC00269	CXorf62|NCRNA00269	long intergenic non-protein coding RNA 269	ncRNA
24-16	chr5	155647733	155647909	+	0.2	NA	Intergenic	Intergenic	634066	NM_001099293	285643	Hs.567824	NM_001099293	ENSG00000226650	KIF4B	-	kinesin family member 4B	protein-coding
53.8-3	chr4	113069168	113069525	+	0.2	NA	intron (NM_001354232, intron 1 of 46)	intron (NM_001354232, intron 1 of 46)	19693	NM_001148	287	Hs.620557	NM_001148	ENSG00000145362	ANK2	ANK-2|LQT4|brank-2	ankyrin 2	protein-coding
38.5333-2	chr7	31687797	31688286	+	0.2	NA	intron (NM_001145123, intron 1 of 3)	intron (NM_001145123, intron 1 of 3)	826	NM_006658	10842	Hs.227011	NM_006658	ENSG00000106341	PPP1R17	C7orf16|GSBS	protein phosphatase 1 regulatory subunit 17	protein-coding
31.4-10	chr2	137677642	137677940	+	0.2	NA	TTS (NM_001316349)	TTS (NM_001316349)	250141	NR_120402	101928273	Hs.560928	NR_120402		LOC101928273	-	uncharacterized LOC101928273	ncRNA
27.6667-4	chr10	124915451	124915740	+	0.2	NA	Intergenic	Intergenic	-26528	NM_017580	54764	Hs.595158	NM_017580	ENSG00000019995	ZRANB1	TRABID	zinc finger RANBP2-type containing 1	protein-coding
31.4-6	chr18	2116620	2116831	+	0.2	NA	Intergenic	L1ME3Cz|LINE|L1	454780	NM_022840	64863	Hs.126888	NM_022840	ENSG00000101574	METTL4	HsT661	methyltransferase like 4	protein-coding
53.3	chr10	60926522	60927145	+	0.2	NA	intron (NM_001350908, intron 2 of 11)	L1MA5|LINE|L1	17352	NM_001350909	9886	Hs.737374	NM_014836	ENSG00000072422	RHOBTB1	-	Rho related BTB domain containing 1	protein-coding
28.3333-6	chr16	49345292	49345513	+	0.2	NA	Intergenic	Charlie19a|DNA|hAT-Charlie	-28402	NM_144602	123970	Hs.125875	NM_144602	ENSG00000166152	C16orf78	-	chromosome 16 open reading frame 78	protein-coding
19.3-10	chr4	29890756	29890904	+	0.2	NA	Intergenic	Intergenic	676538	NR_146996	105374561	Hs.582013	NR_146996	ENSG00000248338	LINC02472	-	long intergenic non-protein coding RNA 2472	ncRNA
50.1333-6	chr8	127085846	127086253	+	0.2	NA	non-coding (NR_109833, exon 1 of 1)	non-coding (NR_109833, exon 1 of 1)	-3828	NR_119373	103164619	Hs.571401	NR_119373	ENSG00000254166	PCAT2	CARLO4|CARLo-4|PCA2|TCONS_00015167	prostate cancer associated transcript 2	ncRNA
23.6-11	chr21	15396242	15396403	+	0.2	NA	Intergenic	L1MC4a|LINE|L1	-331322	NM_003489	8204	Hs.155017	NM_003489	ENSG00000180530	NRIP1	CAKUT3|RIP140	nuclear receptor interacting protein 1	protein-coding
41.7-7	chr4	111282777	111283336	+	0.2	NA	Intergenic	Intergenic	-422409	NR_030643	100126354		NR_030643	ENSG00000215961	MIR297	MIRN297|hsa-mir-297	microRNA 297	ncRNA
69.3	chr14	63498758	63499221	+	0.2	NA	intron (NM_001354926, intron 2 of 2)	intron (NM_001354926, intron 2 of 2)	9249	NM_001282181	5529	Hs.334868	NM_006246	ENSG00000154001	PPP2R5E	B56E|B56epsilon	protein phosphatase 2 regulatory subunit B'epsilon	protein-coding
31.3333-3	chr14	104726159	104726517	+	0.2	NA	intron (NM_152328, intron 1 of 12)	intron (NM_152328, intron 1 of 12)	2141	NM_152328	122622	Hs.592327	NM_152328	ENSG00000185100	ADSSL1	Adss1|MPD5	adenylosuccinate synthase like 1	protein-coding
52.1333-5	chr7	87269995	87270324	+	0.2	NA	Intergenic	MER63D|DNA|hAT-Blackjack	-49572	NR_138030	79161	Hs.619593	NM_024315	ENSG00000135185	TMEM243	C7orf23|MM-TRAG|MMTRAG	transmembrane protein 243	protein-coding
36.4-12	chr6	75106489	75106694	+	0.2	NA	intron (NM_080645, intron 37 of 50)	intron (NM_080645, intron 37 of 50)	22191	NR_145788	109623475		NR_145788		SNORD156	-	small nucleolar RNA, C/D box 156	snoRNA
48.4666	chr10	100931151	100931675	+	0.2	NA	intron (NM_018121, intron 9 of 19)	intron (NM_018121, intron 9 of 19)	18450	NM_001243770	55719	Hs.447458	NM_018121	ENSG00000119906	SLF2	C10orf6|FAM178A	SMC5-SMC6 complex localization factor 2	protein-coding
47.6-5	chr3	7415715	7416064	+	0.2	NA	intron (NM_000844, intron 5 of 9)	intron (NM_000844, intron 5 of 9)	119395	NR_046606	100873937	Hs.570608	NR_046606	ENSG00000236202	GRM7-AS1	-	GRM7 antisense RNA 1	ncRNA
77.7333	chr8	137103649	137104247	+	0.2	NA	Intergenic	Intergenic	309640	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
27.1667-2	chr1	194722877	194723012	+	0.2	NA	Intergenic	L1MA8|LINE|L1	1365771	NR_146895	105371673		NR_146895		LINC01724	-	long intergenic non-protein coding RNA 1724	ncRNA
37-3	chr14	79372792	79373101	+	0.2	NA	intron (NM_001105250, intron 1 of 6)	intron (NM_001105250, intron 1 of 6)	93566	NM_138970	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
25.9-5	chr3	26308525	26308670	+	0.2	NA	Intergenic	LTR36|LTR|ERV1	-314209	NM_052953	116135	Hs.517868	NM_052953	ENSG00000179796	LRRC3B	LRP15	leucine rich repeat containing 3B	protein-coding
36.5-8	chr4	29453544	29453821	+	0.2	NA	Intergenic	Intergenic	239390	NR_146996	105374561	Hs.582013	NR_146996	ENSG00000248338	LINC02472	-	long intergenic non-protein coding RNA 2472	ncRNA
28.4333-2	chr12	27886762	27887136	+	0.2	NA	Intergenic	AluY|SINE|Alu	83027	NM_198964	5744	Hs.591159	NM_002820	ENSG00000087494	PTHLH	BDE2|HHM|PLP|PTHR|PTHRP	parathyroid hormone like hormone	protein-coding
35.8-5	chr20	36640761	36640993	+	0.2	NA	intron (NM_175077, intron 2 of 7)	MER3|DNA|hAT-Charlie	5319	NM_032214	84174	Hs.713578	NM_032214	ENSG00000101082	SLA2	C20orf156|MARS|SLAP-2|SLAP2	Src like adaptor 2	protein-coding
18.5333-13	chr2	20310514	20310752	+	0.2	NA	intron (NM_001352930, intron 4 of 19)	intron (NM_001352930, intron 4 of 19)	16753	NM_001282790	23369	Hs.467824	NM_015317	ENSG00000055917	PUM2	PUMH2|PUML2	pumilio RNA binding family member 2	protein-coding
31.2667-4	chr2	5498469	5498654	+	0.2	NA	Intergenic	Intergenic	192557	NR_110580	102723818	Hs.128107	NR_110580		LINC01248	-	long intergenic non-protein coding RNA 1248	ncRNA
67.3332	chr3	89484294	89484914	+	0.2	NA	Intergenic	LTR16B1|LTR|ERVL	376983	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
17.9333-12	chr4	56227012	56227126	+	0.2	NA	intron (NM_020722, intron 2 of 10)	MSTB1|LTR|ERVL-MaLR	56874	NM_020722	57482	Hs.596667	NM_020722	ENSG00000109265	KIAA1211	CRAD	KIAA1211	protein-coding
42.1999	chr14	44922407	44922684	+	0.2	NA	Intergenic	L1MA4|LINE|L1	-10628	NR_110050	101927418	Hs.144809	NR_110050	ENSG00000258949	LOC101927418	-	uncharacterized LOC101927418	ncRNA
35-9	chr5	42609931	42610120	+	0.2	NA	intron (NM_001242460, intron 1 of 7)	intron (NM_001242460, intron 1 of 7)	44161	NM_001242460	2690	Hs.125180	NM_000163	ENSG00000112964	GHR	GHBP|GHIP	growth hormone receptor	protein-coding
33.2334-2	chr10	15520922	15521208	+	0.2	NA	intron (NM_001291494, intron 27 of 28)	AluSz|SINE|Alu	-149776	NM_001010924	221061	Hs.66762	NM_001010924	ENSG00000148468	FAM171A1	APCN|C10orf38	family with sequence similarity 171 member A1	protein-coding
41.3333-3	chr5	113295697	113296001	+	0.2	NA	promoter-TSS (NM_002387)	promoter-TSS (NM_002387)	-911	NM_002387	4163	Hs.593171	NM_002387	ENSG00000171444	MCC	MCC1	MCC regulator of WNT signaling pathway	protein-coding
41.0666-2	chr7	53532990	53533320	+	0.2	NA	Intergenic	Intergenic	278776	NR_038371	401337	Hs.531378	NM_001001707	ENSG00000205628	LINC01446	GS1-179L18.1	long intergenic non-protein coding RNA 1446	ncRNA
77.0668	chr12	19890815	19891304	+	0.2	NA	Intergenic	Intergenic	-123626	NR_040098	100506393	Hs.658356	NR_040098	ENSG00000256287	LINC02398	-	long intergenic non-protein coding RNA 2398	ncRNA
24.0667-8	chr6	84477631	84477836	+	0.2	NA	Intergenic	L1M4|LINE|L1	-2804	NR_132100	105377880	Hs.171384	NR_132100	ENSG00000231776	LINC01611	TCONS_l2_00025430	long intergenic non-protein coding RNA 1611	ncRNA
39.3333-5	chr5	110295865	110296198	+	0.2	NA	Intergenic	MER44D|DNA|TcMar-Tigger	217884	NR_031644	100302159		NR_031644	ENSG00000221436	MIR548F3	MIR548F-3|MIRN548F3|hsa-mir-548f-3	microRNA 548f-3	ncRNA
44.4-7	chr21	43788325	43788659	+	0.2	NA	Intergenic	AluY|SINE|Alu	-1085	NM_003683	8568	Hs.110757	NM_003683	ENSG00000160214	RRP1	D21S2056E|NNP-1|NOP52|RRP1A	ribosomal RNA processing 1	protein-coding
23.8333-10	chr9	9416039	9416348	+	0.2	NA	intron (NM_002839, intron 8 of 45)	L2|LINE|L2	-383199	NR_135135	105375972	Hs.738242	NR_135135	ENSG00000230920	LOC105375972	-	uncharacterized LOC105375972	ncRNA
25.5333	chr1	178507291	178507490	+	0.2	NA	Intergenic	Intergenic	-5719	NM_001170724	84066	Hs.534501	NM_032126	ENSG00000240021	TEX35	C1orf49|TSC24	testis expressed 35	protein-coding
40.4334	chr18	52122663	52123175	+	0.2	NA	Intergenic	Intergenic	-217278	NM_005215	1630	Hs.162025	NM_005215	ENSG00000187323	DCC	CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1	DCC netrin 1 receptor	protein-coding
32.6334-4	chr9	36939161	36939516	+	0.2	NA	intron (NR_104000, intron 6 of 9)	intron (NR_104000, intron 6 of 9)	-45807	NR_039687	100616456		NR_039687	ENSG00000265368	MIR4476	mir-4476	microRNA 4476	ncRNA
66.9332	chr4	11872900	11873346	+	0.2	NA	Intergenic	BLACKJACK|DNA|hAT-Blackjack	89945	NR_162127	113218507		NR_162127		MIR12113	-	microRNA 12113	ncRNA
50.8-2	chr8	118931295	118931792	+	0.2	NA	intron (NM_002546, intron 2 of 4)	intron (NM_002546, intron 2 of 4)	20342	NM_002546	4982	Hs.81791	NM_002546	ENSG00000164761	TNFRSF11B	OCIF|OPG|PDB5|TR1	TNF receptor superfamily member 11b	protein-coding
31.1-11	chr8	51888839	51889032	+	0.2	NA	intron (NM_001363193, intron 1 of 5)	intron (NM_001363193, intron 1 of 5)	10101	NM_052937	115294	Hs.671268	NM_052937	ENSG00000168300	PCMTD1	-	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding
55.3-4	chr6	51234639	51234994	+	0.2	NA	Intergenic	Intergenic	-387054	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
41.1333-2	chr10	66680669	66681040	+	0.2	NA	intron (NM_001127384, intron 9 of 17)	L2b|LINE|L2	-245182	NM_178011	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding
46.7333-3	chr3	135376364	135376736	+	0.2	NA	Intergenic	L1ME5|LINE|L1	581290	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding
21.7-19	chr9	129594231	129594387	+	0.2	NA	Intergenic	HERVFH19-int|LTR|ERV1	-14575	NM_001286796	28989	Hs.744027	NM_014064	ENSG00000148335	NTMT1	AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A	N-terminal Xaa-Pro-Lys N-methyltransferase 1	protein-coding
16.1333	chr1	33758111	33758240	+	0.2	NA	intron (NM_052896, intron 13 of 69)	L2|LINE|L2	-102300	NM_145205	127540	Hs.568628	NM_145205	ENSG00000176256	HMGB4	dJ1007G16.5	high mobility group box 4	protein-coding
27.6-15	chr7	79363241	79363477	+	0.2	NA	intron (NM_001301128, intron 1 of 20)	L1MDa|LINE|L1	-89598	NR_038345	100505881	Hs.31474	NR_038343	ENSG00000234456	MAGI2-AS3	-	MAGI2 antisense RNA 3	ncRNA
35.8667	chr10	44447106	44447362	+	0.2	NA	Intergenic	MLT1D-int|LTR|ERVL-MaLR	-62137	NM_001178134	6387	Hs.522891	NM_000609	ENSG00000107562	CXCL12	IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1	C-X-C motif chemokine ligand 12	protein-coding
41.3	chr1	225910121	225910636	+	0.2	NA	Intergenic	Intergenic	11764	NR_106799	102466270		NR_106799	ENSG00000284519	MIR6741	hsa-mir-6741	microRNA 6741	ncRNA
51.4-2	chr8	69049838	69050212	+	0.2	NA	intron (NR_039986, intron 2 of 4)	Tigger1|DNA|TcMar-Tigger	54165	NR_039986	100505718	Hs.122386	NR_039986	ENSG00000253658	LINC01592	-	long intergenic non-protein coding RNA 1592	ncRNA
53.2334	chr7	112274660	112274940	+	0.2	NA	intron (NM_021994, intron 1 of 11)	intron (NM_021994, intron 1 of 11)	68105	NM_021994	11179	Hs.655904	NM_021994	ENSG00000198839	ZNF277	NRIF4|ZNF277P	zinc finger protein 277	protein-coding
42.6667	chr1	23616139	23616597	+	0.2	NA	Intergenic	Intergenic	-10966	NM_001348075	259283	Hs.523369	NM_001348075		MDS2	-	myelodysplastic syndrome 2 translocation associated	protein-coding
33.5333	chr1	24041571	24041827	+	0.2	NA	Intergenic	AluJr|SINE|Alu	-61236	NR_034035	10772	Hs.3530	NM_006625	ENSG00000188529	SRSF10	FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2	serine and arginine rich splicing factor 10	protein-coding
39.1667-3	chr5	8808278	8808529	+	0.2	NA	Intergenic	L1MA7|LINE|L1	-31329	NR_109932	101929284	Hs.403715	NR_109932		LINC02199	-	long intergenic non-protein coding RNA 2199	ncRNA
26.8-3	chr12	33037046	33037232	+	0.2	NA	Intergenic	Intergenic	-140293	NM_004572	5318	Hs.164384	NM_004572	ENSG00000057294	PKP2	ARVD9	plakophilin 2	protein-coding
44.4-5	chr15	23710126	23710418	+	0.2	NA	Intergenic	HERV4_I-int|LTR|ERV1	-22967	NM_002487	4692	Hs.50130	NM_002487	ENSG00000182636	NDN	HsT16328|PWCR	necdin, MAGE family member	protein-coding
19.8667-13	chr5	179747682	179747957	+	0.2	NA	intron (NM_014757, intron 1 of 4).2	AluYe5|SINE|Alu	14997	NM_014757	9794	Hs.631951	NM_014757	ENSG00000161021	MAML1	Mam-1|Mam1	mastermind like transcriptional coactivator 1	protein-coding
33.4-7	chr5	65162201	65162470	+	0.2	NA	intron (NR_135689, intron 25 of 25)	intron (NR_135689, intron 25 of 25)	319585	NM_197941	11174	Hs.482291	NM_197941	ENSG00000049192	ADAMTS6	ADAM-TS 6|ADAM-TS6|ADAMTS-6	ADAM metallopeptidase with thrombospondin type 1 motif 6	protein-coding
48.3333-2	chr14	41634677	41634998	+	0.2	NA	intron (NM_001346173, intron 1 of 4)	intron (NM_001346173, intron 1 of 4)	27981	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
42.6666-4	chr5	118190608	118190963	+	0.2	NA	intron (NR_104997, intron 2 of 2)	intron (NR_104997, intron 2 of 2)	-91789	NR_104609	100505811	Hs.369776	NR_104609	ENSG00000250427	LINC02148	HNCAT21	long intergenic non-protein coding RNA 2148	ncRNA
57.2333	chr9	36368954	36369614	+	0.2	NA	intron (NM_194328, intron 4 of 11)	AluSz|SINE|Alu	30985	NM_022781	152006	Hs.333503	NM_022781	ENSG00000137075	RNF38	-	ring finger protein 38	protein-coding
43.2667-7	chr7	17262853	17263304	+	0.2	NA	Intergenic	Intergenic	-35574	NM_001621	196	Hs.171189	NM_001621	ENSG00000106546	AHR	RP85|bHLHe76	aryl hydrocarbon receptor	protein-coding
48.4666-2	chr7	6230180	6230540	+	0.2	NA	intron (NM_001367581, intron 1 of 13)	intron (NM_001367581, intron 1 of 13)	42264	NM_001367580	9265	Hs.487479	NM_004227	ENSG00000008256	CYTH3	ARNO3|GRP1|PSCD3|cytohesin-3	cytohesin 3	protein-coding
10.5333	chr13	23116987	23117040	+	0.2	NA	Intergenic	L2a|LINE|L2	-63908	NM_000231	6445	Hs.37167	NM_000231	ENSG00000102683	SGCG	35DAG|A4|DAGA4|DMDA|DMDA1|LGMD2C|LGMDR5|MAM|SCARMD2|SCG3|gamma-SG	sarcoglycan gamma	protein-coding
49.1-2	chr4	125721547	125721895	+	0.2	NA	Intergenic	Intergenic	214462	NR_031746	100302267		NR_031746	ENSG00000283550	MIR2054	hsa-mir-2054	microRNA 2054	ncRNA
26.6-7	chr14	38749369	38749616	+	0.2	NA	non-coding (NR_039982, exon 5 of 5)	non-coding (NR_039982, exon 5 of 5)	-133104	NR_135256	105370457	Hs.128254	NR_135256		LOC105370457	-	uncharacterized LOC105370457	ncRNA
36.1-2	chr5	130295545	130295857	+	0.2	NA	Intergenic	Intergenic	391236	NM_175856	337876	Hs.213137	NM_175856	ENSG00000198108	CHSY3	CHSY2|CSS3	chondroitin sulfate synthase 3	protein-coding
44.9333	chr10	74910484	74910913	+	0.2	NA	intron (NM_001370144, intron 3 of 15)	L3|LINE|CR1	-2088	NR_134476	101929165	Hs.670533	NR_134476		LOC101929165	-	uncharacterized LOC101929165	ncRNA
40.6-3	chr2	26067260	26067571	+	0.2	NA	intron (NM_016131, intron 1 of 5)	BLACKJACK|DNA|hAT-Blackjack	33331	NM_016131	10890	Hs.467960	NM_016131	ENSG00000084733	RAB10	-	RAB10, member RAS oncogene family	protein-coding
40.5333-8	chr6	125015899	125016250	+	0.2	NA	intron (NM_152553, intron 3 of 8)	intron (NM_152553, intron 3 of 8)	32706	NM_152553	154214	Hs.12876	NM_152553	ENSG00000146373	RNF217	C6orf172|IBRDC1|OSTL|dJ84N20.1	ring finger protein 217	protein-coding
42.5999	chr16	86920027	86920381	+	0.2	NA	Intergenic	Intergenic	-137580	NR_126008	440390	Hs.513789	NR_126008	ENSG00000232190	LINC02181	-	long intergenic non-protein coding RNA 2181	ncRNA
42.1-2	chr2	124027651	124027932	+	0.2	NA	intron (NM_130773, intron 1 of 23)	intron (NM_130773, intron 1 of 23)	2504	NM_001367498	129684	Hs.660653	NM_130773	ENSG00000155052	CNTNAP5	caspr5	contactin associated protein like 5	protein-coding
35.8666-2	chr10	6712545	6712771	+	0.2	NA	Intergenic	Intergenic	-24724	NR_138480	108570035	Hs.568834	NR_138480		LINP1	-	lncRNA in non-homologous end joining pathway 1	ncRNA
50.4-4	chr2	122540874	122541345	+	0.2	NA	Intergenic	Intergenic	532372	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
34.2-6	chr22	24717427	24717657	+	0.2	NA	Intergenic	Intergenic	-46959	NR_001283	7152	Hs.381281	NR_001283		TOP1P2	-	DNA topoisomerase I pseudogene 2	pseudo
51-4	chr7	822736	823088	+	0.2	NA	exon (NM_001367651, exon 2 of 22)	exon (NM_001367651, exon 2 of 22)	6269	NM_001367634	23353	Hs.438072	NM_025154	ENSG00000164828	SUN1	UNC84A	Sad1 and UNC84 domain containing 1	protein-coding
56.2-2	chr2	14275186	14275670	+	0.2	NA	intron (NR_103814, intron 2 of 3)	intron (NR_103814, intron 2 of 3)	125530	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA
86.8666	chr4	32440754	32441311	+	0.2	NA	Intergenic	Intergenic	89994	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
42.5-3	chr15	70145510	70145863	+	0.2	NA	Intergenic	L1ME4a|LINE|L1	-47769	NM_001282980	7090	Hs.287362	NM_005078	ENSG00000140332	TLE3	ESG|ESG3|GRG3|HsT18976	TLE family member 3, transcriptional corepressor	protein-coding
34.7999	chr14	57664186	57664486	+	0.2	NA	intron (NM_001352014, intron 1 of 9)	intron (NM_001352014, intron 1 of 9)	-170479	NM_001283058	55195	Hs.659706	NM_018168	ENSG00000100557	CCDC198	C14orf105	coiled-coil domain containing 198	protein-coding
63.7334	chr17	67745994	67746659	+	0.2	NA	Intergenic	AluSz6|SINE|Alu	5656	NR_003706	100124536	Hs.693446	NR_003706	ENSG00000200394	SNORA38B	-	small nucleolar RNA, H/ACA box 38B	snoRNA
38.2	chr1	21570236	21570481	+	0.2	NA	exon (NM_001127501, exon 7 of 11)	exon (NM_001127501, exon 7 of 11)	19088	NM_001369803	249	Hs.75431	NM_000478	ENSG00000162551	ALPL	AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP	alkaline phosphatase, biomineralization associated	protein-coding
76.8666	chr7	69362420	69362883	+	0.2	NA	Intergenic	Intergenic	234973	NR_108105	100507468	Hs.362492	NR_108105		CT66	-	cancer/testis associated transcript 66	ncRNA
18.2	chr1	5729433	5729553	+	0.2	NA	Intergenic	LTR40a|LTR|ERVL	133248	NR_039838	100616421		NR_039838	ENSG00000264101	MIR4689	mir-4689	microRNA 4689	ncRNA
48.8-2	chr11	132883394	132883723	+	0.2	NA	intron (NM_001319104, intron 1 of 6)	intron (NM_001319104, intron 1 of 6)	60079	NM_001319103	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding
42.7-4	chr12	4922338	4922647	+	0.2	NA	Intergenic	Intergenic	12587	NM_000217	3736	Hs.416139	NM_000217	ENSG00000111262	KCNA1	AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1	potassium voltage-gated channel subfamily A member 1	protein-coding
42.9-2	chr14	25076561	25076868	+	0.2	NA	Intergenic	MER3|DNA|hAT-Charlie	-26417	NM_001351940	29091	Hs.508958	NM_014178	ENSG00000168952	STXBP6	HSPC156|amisyn	syntaxin binding protein 6	protein-coding
22.2667-7	chr3	98916343	98916563	+	0.2	NA	Intergenic	Intergenic	-14758	NM_080927	131566	Hs.203691	NM_080927	ENSG00000057019	DCBLD2	CLCP1|ESDN	discoidin, CUB and LCCL domain containing 2	protein-coding
43.0001	chr4	161260301	161260649	+	0.2	NA	Intergenic	L2a|LINE|L2	-762258	NR_125888	101928052	Hs.647993	NR_125888	ENSG00000249419	LOC101928052	-	uncharacterized LOC101928052	ncRNA
58-2	chr17	72540539	72541042	+	0.2	NA	intron (NR_036488, intron 1 of 3)	intron (NR_036488, intron 1 of 3)	52014	NR_137280	100499467	Hs.157726	NR_036488	ENSG00000227036	LINC00673	ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1	long intergenic non-protein coding RNA 673	ncRNA
46.7-2	chr7	124589438	124590032	+	0.2	NA	Intergenic	THE1B-int|LTR|ERVL-MaLR	176057	NM_005302	2861	Hs.406094	NM_005302	ENSG00000170775	GPR37	EDNRBL|PAELR|hET(B)R-LP	G protein-coupled receptor 37	protein-coding
21.9-3	chr11	29458305	29458461	+	0.2	NA	Intergenic	Intergenic	-136030	NR_149107	105376606	Hs.577275	NR_149106	ENSG00000255117	LINC02546	-	long intergenic non-protein coding RNA 2546	ncRNA
55.4-4	chr7	53323754	53324214	+	0.2	NA	Intergenic	Intergenic	288351	NM_182595	285877	Hs.381970	NM_182595	ENSG00000221900	POM121L12	-	POM121 transmembrane nucleoporin like 12	protein-coding
40.3334-2	chr8	113932897	113933139	+	0.2	NA	Intergenic	Intergenic	-496079	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
29.9	chr16	86693735	86693989	+	0.2	NA	Intergenic	L1M5|LINE|L1	28097	NR_135181	101928614	Hs.399823	NR_135181	ENSG00000260026	LINC02189	-	long intergenic non-protein coding RNA 2189	ncRNA
34.8334-2	chr8	75433651	75433922	+	0.2	NA	intron (NM_001330561, intron 1 of 11)	L1MC|LINE|L1	26137	NM_001330561	3174	Hs.241529	NM_004133	ENSG00000164749	HNF4G	NR2A2|NR2A3	hepatocyte nuclear factor 4 gamma	protein-coding
22.5667-6	chr3	172978298	172978477	+	0.2	NA	intron (NM_031955, intron 4 of 10)	intron (NM_031955, intron 4 of 10)	162848	NM_031955	83893	Hs.444236	NM_031955	ENSG00000144962	SPATA16	NYD-SP12|SPGF6	spermatogenesis associated 16	protein-coding
45.8667-3	chr17	43501949	43502220	+	0.2	NA	intron (NR_136228, intron 11 of 23)	L2b|LINE|L2	18109	NR_136228	1659	Hs.463105	NM_004941	ENSG00000067596	DHX8	DDX8|Dhr2|HRH1|PRP22|PRPF22	DEAH-box helicase 8	protein-coding
54.4666	chr4	66878250	66878723	+	0.2	NA	Intergenic	L4_B_Mam|LINE|RTE-X	543514	NR_110747	101927237	Hs.435644	NR_110747	ENSG00000250075	LOC101927237	-	uncharacterized LOC101927237	ncRNA
34.7667	chr1	177395904	177396202	+	0.2	NA	Intergenic	L2a|LINE|L2	44467	NR_126001	102724661	Hs.146628	NR_126001		LINC01645	-	long intergenic non-protein coding RNA 1645	ncRNA
50.5333-5	chr4	43716717	43717124	+	0.2	NA	Intergenic	Intergenic	-224377	NR_146993	105374436	Hs.170605	NR_146993	ENSG00000248143	LINC02383	-	long intergenic non-protein coding RNA 2383	ncRNA
64.9332	chr2	82008501	82009020	+	0.2	NA	Intergenic	AluSq2|SINE|Alu	-541814	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
32-6	chr15	71826240	71826484	+	0.2	NA	3' UTR (NM_006901, exon 42 of 42)	3' UTR (NM_006901, exon 42 of 42)	15808	NM_016346	10002	Hs.187354	NM_014249	ENSG00000278570	NR2E3	ESCS|PNR|RNR|RP37|rd7	nuclear receptor subfamily 2 group E member 3	protein-coding
27.1-2	chr12	27527753	27527976	+	0.2	NA	intron (NM_003622, intron 1 of 29)	intron (NM_003622, intron 1 of 29)	3658	NM_003622	8496	Hs.172445	NM_003622	ENSG00000110841	PPFIBP1	L2|SGT2|hSGT2|hSgt2p	PPFIA binding protein 1	protein-coding
14.4-10	chr2	35699693	35699838	+	0.2	NA	Intergenic	L1M8|LINE|L1	228360	NR_039629	100616475		NR_039629	ENSG00000265301	MIR548AD	-	microRNA 548ad	ncRNA
23.7333-11	chr9	121220793	121220936	+	0.2	NA	intron (NM_001353054, intron 5 of 25)	MER113|DNA|hAT-Charlie	-18995	NM_016322	51552	Hs.371563	NM_016322	ENSG00000119396	RAB14	FBP|RAB-14	RAB14, member RAS oncogene family	protein-coding
51.4334-2	chr14	82971543	82972067	+	0.2	NA	Intergenic	Intergenic	329173	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
48.4	chr4	8542989	8543318	+	0.2	NA	Intergenic	Intergenic	-37084	NR_045511	27201	Hs.740355	NM_080819	ENSG00000155269	GPR78	-	G protein-coupled receptor 78	protein-coding
25.8-25	chr9	130339176	130339383	+	0.2	NA	intron (NM_001291815, intron 23 of 97)	MER58B|DNA|hAT-Charlie	73519	NM_001291815	256158	Hs.32194	NM_144655	ENSG00000148357	HMCN2	-	hemicentin 2	protein-coding
34.6667-12	chr7	4161401	4161659	+	0.2	NA	intron (NM_001079653, intron 5 of 19)	intron (NM_001079653, intron 5 of 19)	-26693	NR_158215	105375131		NR_158215		LOC105375131	-	uncharacterized LOC105375131	ncRNA
27.4-13	chr3	72200236	72200562	+	0.2	NA	Intergenic	MER4A1|LTR|ERV1	49142	NR_038221	201617	Hs.382623	NR_038221	ENSG00000243083	LINC00870	-	long intergenic non-protein coding RNA 870	ncRNA
32.5667-10	chrX	67838393	67838717	+	0.2	NA	Intergenic	L1MA2|LINE|L1	293932	NM_001348061	367	Hs.76704	NM_000044	ENSG00000169083	AR	AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM	androgen receptor	protein-coding
44.7-7	chrUn_KI270442v1	82609	82983	+	0.2	NA	NA	(AATGG)n|Simple_repeat|Simple_repeat	NA	NA								
33.1	chr16	80318418	80318646	+	0.2	NA	intron (NR_120307, intron 2 of 5)	intron (NR_120307, intron 2 of 5)	-222202	NM_001305017	83657	Hs.98849	NM_130897	ENSG00000168589	DYNLRB2	DNCL2B|DNLC2B|ROBLD2	dynein light chain roadblock-type 2	protein-coding
52.9333	chr3	25435704	25436034	+	0.2	NA	intron (NR_110892, intron 1 of 6)	intron (NR_110892, intron 1 of 6)	7606	NR_110892	5915	Hs.543218	NM_000965	ENSG00000077092	RARB	HAP|MCOPS12|NR1B2|RARbeta1|RRB2	retinoic acid receptor beta	protein-coding
67.3999	chr5	80235043	80235688	+	0.2	NA	intron (NR_126061, intron 1 of 13)	L1M|LINE|L1	20683	NR_126061	256987	Hs.288232	NM_178276	ENSG00000164300	SERINC5	C5orf12|TPO1	serine incorporator 5	protein-coding
19-9	chr2	43976461	43976741	+	0.2	NA	intron (NM_133259, intron 5 of 37)	intron (NM_133259, intron 5 of 37)	19388	NM_133259	10128	Hs.368084	NM_133259	ENSG00000138095	LRPPRC	CLONE-23970|GP130|LRP130|LSFC	leucine rich pentatricopeptide repeat containing	protein-coding
39.7333-2	chr6	126871817	126872110	+	0.2	NA	Intergenic	MIR3|SINE|MIR	-246708	NM_032784	84870	Hs.135254	NM_032784	ENSG00000146374	RSPO3	CRISTIN1|PWTSR|THSD2	R-spondin 3	protein-coding
30.8666-5	chr9	134024270	134024565	+	0.2	NA	Intergenic	AluJo|SINE|Alu	-1059	NR_149319	266655	Hs.654869	NM_001355256	ENSG00000235106	BRD3OS	LINC00094|LP2477|NCRNA00094	BRD3 opposite strand	protein-coding
39.2666-4	chr17	61379636	61379978	+	0.2	NA	intron (NM_001099432, intron 24 of 24)	intron (NM_001099432, intron 24 of 24)	-12103	NR_136397	101927855	Hs.662123	NR_136397	ENSG00000267131	LOC101927855	-	uncharacterized LOC101927855	ncRNA
55.6	chr10	69712242	69712647	+	0.2	NA	Intergenic	Intergenic	82197	NM_145306	219738	Hs.522992	NM_145306	ENSG00000171224	FAM241B	C10orf35	family with sequence similarity 241 member B	protein-coding
22.1333-10	chr3	6879564	6879713	+	0.2	NA	intron (NM_000844, intron 1 of 9)	intron (NM_000844, intron 1 of 9)	14379	NR_131906	105376946	Hs.616038	NR_131906	ENSG00000237665	GRM7-AS2	-	GRM7 antisense RNA 2	ncRNA
44.4333	chr13	64593030	64593265	+	0.2	NA	Intergenic	L1PA15|LINE|L1	-517136	NR_145420	144766	Hs.719557	NR_145420	ENSG00000227674	LINC00355	-	long intergenic non-protein coding RNA 355	ncRNA
26.9333-17	chr8	130177813	130178034	+	0.2	NA	intron (NM_001362925, intron 9 of 29)	MIRb|SINE|MIR	-93155	NR_045385	100507117	Hs.106015	NR_045385	ENSG00000280543	ASAP1-IT2	-	ASAP1 intronic transcript 2	ncRNA
41.6667-3	chr2	58851009	58851547	+	0.2	NA	intron (NR_033873, intron 3 of 13)	LTR103_Mam|LTR|ERV1?	330525	NR_033873	400955	Hs.503210	NR_033873	ENSG00000233723	LINC01122	-	long intergenic non-protein coding RNA 1122	ncRNA
24.5-4	chr12	87458546	87458855	+	0.2	NA	Intergenic	Intergenic	127961	NR_135020	105369879	Hs.552351	NR_135020		LOC105369879	-	uncharacterized LOC105369879	ncRNA
43.0667-3	chr13	44367914	44368209	+	0.2	NA	Intergenic	Intergenic	-5589	NM_001346980	387923	Hs.377972	NM_001010897	ENSG00000151778	SERP2	C13orf21|bA269C23.1	stress associated endoplasmic reticulum protein family member 2	protein-coding
45.9	chr16	62385837	62386258	+	0.2	NA	Intergenic	Intergenic	-349609	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
38.9333-6	chr15	67340520	67340775	+	0.2	NA	intron (NM_001031715, intron 5 of 20)	MER92-int|LTR|ERV1	-85449	NM_001271885	79719	Hs.254642	NM_024666	ENSG00000103591	AAGAB	KPPP1|PPKP1|PPKP1A|p34	alpha and gamma adaptin binding protein	protein-coding
57.7332-2	chr8	92805423	92805825	+	0.2	NA	Intergenic	Intergenic	-19564	NR_046114	441369	Hs.521683	NR_046114	ENSG00000248858	FLJ46284	-	uncharacterized LOC441369	ncRNA
44.2666-2	chr12	14664357	14664612	+	0.2	NA	intron (NM_004963, intron 10 of 26)	intron (NM_004963, intron 10 of 26)	32115	NM_004963	2984	Hs.524278	NM_004963	ENSG00000070019	GUCY2C	DIAR6|GC-C|GUC2C|MECIL|MUCIL|STAR	guanylate cyclase 2C	protein-coding
51.6001	chr8	13453832	13454482	+	0.2	NA	intron (NM_024767, intron 2 of 4)	intron (NM_024767, intron 2 of 4)	60694	NM_024767	10395	Hs.134296	NM_006094	ENSG00000164741	DLC1	ARHGAP7|HP|STARD12|p122-RhoGAP	DLC1 Rho GTPase activating protein	protein-coding
15.8334	chr11	85168509	85168650	+	0.2	NA	intron (NM_001142699, intron 4 of 27)	intron (NM_001142699, intron 4 of 27)	-245158	NM_001300983	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
35.4666-4	chr14	70666702	70666992	+	0.2	NA	intron (NM_015351, intron 1 of 2)	(ATG)n|Simple_repeat|Simple_repeat	24931	NM_015351	23508	Hs.79170	NM_015351	ENSG00000133985	TTC9	TTC9A	tetratricopeptide repeat domain 9	protein-coding
31.4-12	chr3	30342218	30342387	+	0.2	NA	Intergenic	Intergenic	-176566	NR_147054	101928015	Hs.581534	NR_147054		LINC01985	-	long intergenic non-protein coding RNA 1985	ncRNA
27.6667-8	chr19	33922969	33923134	+	0.2	NA	Intergenic	AluJr|SINE|Alu	126181	NM_001129994	79047	Hs.221873	NM_024076	ENSG00000153885	KCTD15	-	potassium channel tetramerization domain containing 15	protein-coding
27.3333-6	chr20	13522065	13522250	+	0.2	NA	intron (NR_136631, intron 10 of 13)	L2a|LINE|L2	116775	NM_017714	55617	Hs.348297	NM_017714	ENSG00000089123	TASP1	C20orf13|dJ585I14.2	taspase 1	protein-coding
61.0334	chr12	113781167	113781574	+	0.2	NA	Intergenic	Intergenic	-7687	NR_110026	100506465	Hs.211461	NR_110025	ENSG00000249550	LINC01234	LCAL84|onco-lncRNA-32	long intergenic non-protein coding RNA 1234	ncRNA
57.5667	chr11	88534959	88535284	+	0.2	NA	intron (NM_001143831, intron 7 of 8)	THE1B|LTR|ERVL-MaLR	30545	NR_049724	100873989	Hs.616625	NR_049724	ENSG00000255082	GRM5-AS1	-	GRM5 antisense RNA 1	ncRNA
36.8666-2	chr2	43225872	43226116	+	0.2	NA	intron (NM_006887, intron 1 of 1)	CpG	612	NM_006887	678	Hs.503093	NM_006887	ENSG00000152518	ZFP36L2	BRF2|ERF-2|ERF2|RNF162C|TIS11D	ZFP36 ring finger protein like 2	protein-coding
38-2	chr15	101115014	101115266	+	0.2	NA	Intergenic	AluJo|SINE|Alu	136908	NM_014918	22856	Hs.110488	NM_014918	ENSG00000131873	CHSY1	CHSY|CSS1|ChSy-1|TPBS	chondroitin sulfate synthase 1	protein-coding
18.7333-8	chr14	61031466	61031610	+	0.2	NA	intron (NR_033344, intron 6 of 16)	intron (NR_033344, intron 6 of 16)	-49848	NM_001350253	57570	Hs.380159	NM_020810	ENSG00000126814	TRMT5	COXPD26|KIAA1393|TRM5	tRNA methyltransferase 5	protein-coding
27.3333-11	chr8	124793509	124793703	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	-28379	NR_039806	100616221		NR_039806	ENSG00000283609	MIR4662A	-	microRNA 4662a	ncRNA
37.2-6	chr2	194739481	194739744	+	0.2	NA	intron (NR_110223, intron 2 of 3)	L1MC3|LINE|L1	9017	NR_110223	101927431	Hs.558215	NR_110223	ENSG00000230173	LINC01790	-	long intergenic non-protein coding RNA 1790	ncRNA
36.4-6	chr18	47118317	47118531	+	0.2	NA	intron (NM_032124, intron 4 of 6)	L1PA10|LINE|L1	32076	NM_001318765	84064	Hs.465041	NM_032124	ENSG00000167220	HDHD2	3110052N05Rik|HEL-S-301	haloacid dehalogenase like hydrolase domain containing 2	protein-coding
39.5-7	chr8	121709511	121709835	+	0.2	NA	Intergenic	Intergenic	-68233	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
60.9667	chr12	76845787	76846320	+	0.2	NA	intron (NM_015336, intron 13 of 16)	intron (NM_015336, intron 13 of 16)	32966	NM_001300965	1466	Hs.530904	NM_001321	ENSG00000175183	CSRP2	CRP2|LMO5|SmLIM	cysteine and glycine rich protein 2	protein-coding
30.0667-3	chr10	112481746	112482282	+	0.2	NA	intron (NM_001365712, intron 3 of 8)	intron (NM_001365712, intron 3 of 8)	-34411	NM_001351082	64429	Hs.196990	NM_022494	ENSG00000023041	ZDHHC6	DHHC-6|ZNF376	zinc finger DHHC-type containing 6	protein-coding
38.1333-2	chr15	65693354	65693631	+	0.2	NA	intron (NM_005848, intron 21 of 31)	intron (NM_005848, intron 21 of 31)	3444	NR_145750	109617020		NR_145750	ENSG00000238311	SNORD13E	-	small nucleolar RNA, C/D box 13E	snoRNA
52.4-5	chr5	115380714	115381208	+	0.2	NA	Intergenic	Helitron1Na_Mam|RC|Helitron	-84307	NM_001040440	153733	Hs.436121	NM_152549	ENSG00000164221	CCDC112	MBC1	coiled-coil domain containing 112	protein-coding
41.9	chr12	16556985	16557350	+	0.2	NA	intron (NM_001001395, intron 3 of 3)	intron (NM_001001395, intron 3 of 3)	48212	NM_001243611	55885	Hs.504908	NM_018640	ENSG00000048540	LMO3	RBTN3|RBTNL2|RHOM3|Rhom-3	LIM domain only 3	protein-coding
60	chr21	21303175	21303658	+	0.2	NA	intron (NM_001352592, intron 6 of 18)	L1ME1|LINE|L1	156254	NM_001352597	4685	Hs.473450	NM_004540	ENSG00000154654	NCAM2	NCAM21	neural cell adhesion molecule 2	protein-coding
21.2667	chr10	37265603	37265717	+	0.2	NA	Intergenic	Intergenic	-43526	NR_104061	101929520	Hs.144151	NR_104061	ENSG00000235687	LINC00993	-	long intergenic non-protein coding RNA 993	ncRNA
29.6666-4	chr3	51827027	51827275	+	0.2	NA	5' UTR (NM_001085479, exon 1 of 7)	5' UTR (NM_001085479, exon 1 of 7)	268	NM_001207023	401067	Hs.729443	NM_001085479	ENSG00000229972	IQCF3	-	IQ motif containing F3	protein-coding
29-3	chr11	59395849	59396105	+	0.2	NA	Intergenic	Intergenic	26976	NM_001001954	219981	Hs.553648	NM_001001954	ENSG00000172324	OR5A2	-	olfactory receptor family 5 subfamily A member 2	protein-coding
36.0667-3	chr4	100768177	100768413	+	0.2	NA	Intergenic	L1M5|LINE|L1	-93182	NR_046811	100874275	Hs.136318	NR_046811	ENSG00000250223	LINC01216	EMCN-IT3	long intergenic non-protein coding RNA 1216	ncRNA
43.7333-2	chr10	122565417	122565800	+	0.2	NA	intron (NM_004406, intron 1 of 39)	MamGypsy2-I|LTR|Gypsy	4854	NM_001320644	1755	Hs.279611	NM_004406	ENSG00000187908	DMBT1	GP340|SAG|SALSA|muclin	deleted in malignant brain tumors 1	protein-coding
33.4667-7	chr4	30437002	30437179	+	0.2	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	-283279	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
71.6-2	chr20	62783776	62784295	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	-7179	NR_046224	100652730	Hs.254951	NR_046224		LINC00659	-	long intergenic non-protein coding RNA 659	ncRNA
31.5333-9	chr8	121084981	121085162	+	0.2	NA	Intergenic	LTR16A2|LTR|ERVL	-273025	NM_021021	6641	Hs.46701	NM_021021	ENSG00000172164	SNTB1	59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43	syntrophin beta 1	protein-coding
38.6-4	chr17	49492338	49492620	+	0.2	NA	Intergenic	AluSc5|SINE|Alu	-2814	NM_002507	4804	Hs.415768	NM_002507	ENSG00000064300	NGFR	CD271|Gp80-LNGFR|TNFRSF16|p75(NTR)|p75NTR	nerve growth factor receptor	protein-coding
25-18	chr9	73072994	73073231	+	0.2	NA	Intergenic	Intergenic	-78753	NM_000700	301	Hs.494173	NM_000700	ENSG00000135046	ANXA1	ANX1|LPC1	annexin A1	protein-coding
43.9-2	chr21	28272249	28272567	+	0.2	NA	Intergenic	MLT1G1|LTR|ERVL-MaLR	-43741	NR_126012	101927973	Hs.570414	NR_126012	ENSG00000236532	LINC01695	-	long intergenic non-protein coding RNA 1695	ncRNA
45.3-2	chr18	62337871	62338314	+	0.2	NA	intron (NM_001270949, intron 1 of 8)	L1MB4|LINE|L1	12782	NM_003839	8792	Hs.204044	NM_003839	ENSG00000141655	TNFRSF11A	CD265|FEO|LOH18CR1|ODFR|OFE|OPTB7|OSTS|PDB2|RANK|TRANCER	TNF receptor superfamily member 11a	protein-coding
22.3-3	chr10	75744387	75744698	+	0.2	NA	TTS (NR_132791)	TTS (NR_132791)	32087	NR_132791	105378367	Hs.464836	NR_132791		LOC105378367	-	uncharacterized LOC105378367	ncRNA
36.4667-2	chr16	59709391	59709808	+	0.2	NA	Intergenic	Intergenic	45592	NR_028471	644649	Hs.250392	NR_028471		APOOP5	-	apolipoprotein O pseudogene 5	pseudo
22.8-20	chrX	43579900	43580064	+	0.2	NA	Intergenic	MERX|DNA|TcMar-Tigger	-74925	NM_001270458	4128	Hs.183109	NM_000240	ENSG00000189221	MAOA	BRNRS|MAO-A	monoamine oxidase A	protein-coding
50.5333-4	chr4	24810933	24811328	+	0.2	NA	intron (NM_001130726, intron 11 of 11)	L1ME4b|LINE|L1	15557	NM_003102	6649	Hs.2420	NM_003102	ENSG00000109610	SOD3	EC-SOD	superoxide dismutase 3	protein-coding
37.1-2	chr3	151919854	151920222	+	0.2	NA	intron (NR_110203, intron 1 of 2)	L1MCb|LINE|L1	8137	NR_110202	101928142	Hs.680207	NR_110202		AADACL2-AS1	-	AADACL2 antisense RNA 1	ncRNA
22.6-16	chr5	88773837	88774023	+	0.2	NA	intron (NM_001364333, intron 3 of 9)	intron (NM_001364333, intron 3 of 9)	11581	NM_001364356	4208	Hs.649965	NM_002397	ENSG00000081189	MEF2C	C5DELq14.3|DEL5q14.3	myocyte enhancer factor 2C	protein-coding
61.7	chr9	96685114	96685585	+	0.2	NA	Intergenic	Intergenic	-30032	NM_153698	195827	Hs.44640	NM_153698	ENSG00000158122	PRXL2C	AAED1|C9orf21	peroxiredoxin like 2C	protein-coding
26.4-12	chr8	144921397	144921562	+	0.2	NA	Intergenic	LTR47A2|LTR|ERVL	-19302	NM_001363099	58500	Hs.532277	NM_021061	ENSG00000196150	ZNF250	ZFP647|ZNF647	zinc finger protein 250	protein-coding
42.6-4	chr4	36900819	36901160	+	0.2	NA	Intergenic	Intergenic	-100790	NR_134669	100508631	Hs.397553	NR_134669	ENSG00000261761	LINC02616	-	long intergenic non-protein coding RNA 2616	ncRNA
23.2-6	chr14	72247480	72247695	+	0.2	NA	intron (NM_001370288, intron 2 of 16)	intron (NM_001370288, intron 2 of 16)	-269233	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA
52.1667	chr13	84939842	84940141	+	0.2	NA	Intergenic	Intergenic	156337	NR_132852	106635542		NR_132852		SNORA107	-	small nucleolar RNA, H/ACA box 107	snoRNA
28.1-13	chr8	106083554	106083773	+	0.2	NA	Intergenic	L1ME3G|LINE|L1	-23160	NR_125797	102723356	Hs.571413	NR_125796		ZFPM2-AS1	SCAT3	ZFPM2 antisense RNA 1	ncRNA
62.1999	chr1	183851155	183851657	+	0.2	NA	intron (NM_001297669, intron 4 of 18)	Arthur1A|DNA|hAT-Tip100	46286	NM_001297672	23179	Hs.497148	NM_015149	ENSG00000143344	RGL1	RGL	ral guanine nucleotide dissociation stimulator like 1	protein-coding
45.4667-5	chr8	102233029	102233457	+	0.2	NA	intron (NM_015713, intron 1 of 8)	intron (NM_015713, intron 1 of 8)	5588	NM_001172477	50484	Hs.512592	NM_015713	ENSG00000048392	RRM2B	MTDPS8A|MTDPS8B|P53R2	ribonucleotide reductase regulatory TP53 inducible subunit M2B	protein-coding
31.8667-2	chr11	106241815	106241992	+	0.2	NA	Intergenic	Intergenic	-8116	NR_120552	101928535	Hs.409078	NR_120551	ENSG00000254811	LOC101928535	-	uncharacterized LOC101928535	ncRNA
39.6-7	chr9	28289067	28289488	+	0.2	NA	intron (NM_152570, intron 5 of 6)	intron (NM_152570, intron 5 of 6)	430028	NM_152570	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
39.3-8	chr9	96464242	96464584	+	0.2	NA	intron (NM_014282, intron 2 of 7)	intron (NM_014282, intron 2 of 7)	14244	NM_014282	22927	Hs.494567	NM_014282	ENSG00000130956	HABP4	IHABP-4|IHABP4|Ki-1/57|SERBP1L	hyaluronan binding protein 4	protein-coding
37.0667-2	chr12	132000120	132000454	+	0.2	NA	intron (NM_015409, intron 12 of 52)	L1MEd|LINE|L1	-30937	NR_002979	677829	Hs.742405	NR_002979	ENSG00000208892	SNORA49	ACA49	small nucleolar RNA, H/ACA box 49	snoRNA
33.4	chr10	49580380	49580682	+	0.2	NA	Intergenic	L1MEc|LINE|L1	-28564	NM_020984	1103	Hs.302002	NM_020549	ENSG00000070748	CHAT	CHOACTASE|CMS1A|CMS1A2|CMS6	choline O-acetyltransferase	protein-coding
29.7667-4	chr18	64318243	64318444	+	0.2	NA	intron (NR_033881, intron 5 of 9)	L1MC1|LINE|L1	-58288	NR_033983	400654	Hs.434235	NR_033983	ENSG00000266952	LINC01538	-	long intergenic non-protein coding RNA 1538	ncRNA
39.3667-2	chr7	28400675	28401367	+	0.2	NA	intron (NM_182899, intron 1 of 9)	intron (NM_182899, intron 1 of 9)	-11497	NM_182898	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5|CREBPA	cAMP responsive element binding protein 5	protein-coding
20.7667-12	chr6	163517903	163518052	+	0.2	NA	intron (NM_206853, intron 3 of 6)	intron (NM_206853, intron 3 of 6)	103259	NM_206855	9444	Hs.510324	NM_006775	ENSG00000112531	QKI	Hqk|QK|QK1|QK3|hqkI	QKI, KH domain containing RNA binding	protein-coding
42.7334	chr2	185720875	185721128	+	0.2	NA	intron (NR_110217, intron 2 of 2)	intron (NR_110217, intron 2 of 2)	17718	NR_110215	101927196	Hs.244783	NR_110214	ENSG00000226747	FSIP2-AS2	-	FSIP2 antisense RNA 2	ncRNA
41.1999	chr1	29523796	29524134	+	0.2	NA	Intergenic	Intergenic	-173851	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA
59.4666-5	chr8	118528166	118528860	+	0.2	NA	intron (NM_001101676, intron 2 of 4)	intron (NM_001101676, intron 2 of 4)	-92488	NR_038210	552860	Hs.571527	NR_038210	ENSG00000281641	SAMD12-AS1	C8orf26|NCRNA00252	SAMD12 antisense RNA 1	ncRNA
55.4	chr12	55429279	55429655	+	0.2	NA	Intergenic	Intergenic	3213	NM_001005183	390326	Hs.553764	NM_001005183	ENSG00000185821	OR6C76	-	olfactory receptor family 6 subfamily C member 76	protein-coding
32.3-5	chr7	91912353	91912561	+	0.2	NA	Intergenic	L2a|LINE|L2	-28405	NM_147185	10142	Hs.651221	NM_005751	ENSG00000127914	AKAP9	AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO	A-kinase anchoring protein 9	protein-coding
34.8667-3	chr15	57840969	57841198	+	0.2	NA	Intergenic	Intergenic	134369	NM_015532	81488	Hs.437256	NM_015532	ENSG00000255529	POLR2M	GCOM1|GRINL1A|Gdown|Gdown1	RNA polymerase II subunit M	protein-coding
37.2	chr1	117997622	117997848	+	0.2	NA	intron (NM_206996, intron 32 of 48)	MER58B|DNA|hAT-Charlie	67996	NM_006784	10885	Hs.310809	NM_006784	ENSG00000065183	WDR3	DIP2|UTP12	WD repeat domain 3	protein-coding
32.7333-3	chr11	104390819	104391032	+	0.2	NA	Intergenic	MamRTE1|LINE|RTE-BovB	218377	NR_120585	102723895	Hs.48803	NR_120585	ENSG00000256422	LINC02552	-	long intergenic non-protein coding RNA 2552	ncRNA
37.3333-6	chr6	156385471	156385837	+	0.2	NA	Intergenic	Intergenic	6904	NR_145751	109617011		NR_145751	ENSG00000212295	SNORD28B	-	small nucleolar RNA, C/D box 28B	snoRNA
44.0666-2	chr14	91018133	91018546	+	0.2	NA	intron (NM_182398, intron 1 of 12)	MLT2B3|LTR|ERVL	41785	NM_001322238	9252	Hs.510225	NM_004755	ENSG00000100784	RPS6KA5	MSK1|MSPK1|RLPK	ribosomal protein S6 kinase A5	protein-coding
39.5	chr1	50531199	50531514	+	0.2	NA	intron (NM_007051, intron 15 of 18)	(AATA)n|Simple_repeat|Simple_repeat	-107913	NM_032110	63950	Hs.334481	NM_032110	ENSG00000142700	DMRTA2	-	DMRT like family A2	protein-coding
37.3-2	chr19	23635164	23635413	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	51924	NM_138330	171392	Hs.264345	NM_138330	ENSG00000197372	ZNF675	TBZF|TIZ	zinc finger protein 675	protein-coding
58.8667	chr2	26318465	26319005	+	0.2	NA	intron (NM_001145168, intron 1 of 12)	intron (NM_001145168, intron 1 of 12)	314	NM_001145168	165082	Hs.631878	NM_153835	ENSG00000173567	ADGRF3	GPR113|PGR23	adhesion G protein-coupled receptor F3	protein-coding
48.9-3	chr20	52044277	52044761	+	0.2	NA	Intergenic	Intergenic	60965	NM_001319146	55734	Hs.473082	NM_018197	ENSG00000020256	ZFP64	ZNF338	ZFP64 zinc finger protein	protein-coding
43.8334-2	chr6	9523455	9523787	+	0.2	NA	Intergenic	L1MEi|LINE|L1	871412	NR_004855	728655	Hs.214343	NR_004855		HULC	HCCAT1|LINC00078|NCRNA00078	hepatocellular carcinoma up-regulated long non-coding RNA	ncRNA
60.3332	chr6	121692399	121692915	+	0.2	NA	Intergenic	Intergenic	257011	NM_000165	2697	Hs.74471	NM_000165	ENSG00000152661	GJA1	AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA	gap junction protein alpha 1	protein-coding
25.2-12	chr22	25027004	25027188	+	0.2	NA	promoter-TSS (NM_001145206)	promoter-TSS (NM_001145206)	-878	NM_001145206	85379	Hs.419171	NM_001145206	ENSG00000197077	KIAA1671	-	KIAA1671	protein-coding
64.5	chr11	22913553	22914000	+	0.2	NA	Intergenic	Intergenic	-53302	NM_001195637	100500938	Hs.555029	NM_001195637	ENSG00000255359	CCDC179	-	coiled-coil domain containing 179	protein-coding
53.6	chr2	67803203	67803572	+	0.2	NA	intron (NR_110271, intron 2 of 2)	MIR3|SINE|MIR	22175	NR_110271	101927701	Hs.348697	NR_110271	ENSG00000237013	LINC01812	-	long intergenic non-protein coding RNA 1812	ncRNA
31.1-5	chr10	108246174	108246428	+	0.2	NA	Intergenic	MER41-int|LTR|ERV1	-177008	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
39.4333	chr1	232714639	232715116	+	0.2	NA	Intergenic	FRAM|SINE|Alu	-3194	NR_146922	105373199	Hs.254475	NR_146922	ENSG00000225919	LINC01745	-	long intergenic non-protein coding RNA 1745	ncRNA
62.7334-3	chr6	119115026	119115612	+	0.2	NA	intron (NM_001288576, intron 1 of 15)	L2c|LINE|L2	33874	NM_001100411	79632	Hs.443789	NM_024581	ENSG00000111879	FAM184A	C6orf60	family with sequence similarity 184 member A	protein-coding
47-2	chr13	29322600	29323032	+	0.2	NA	intron (NM_001033602, intron 4 of 13)	L2a|LINE|L2	-105844	NM_015233	23281	Hs.22287	NM_015233	ENSG00000132938	MTUS2	CAZIP|ICIS|KIAA0774|TIP150	microtubule associated scaffold protein 2	protein-coding
59.3333-4	chr7	112676774	112677262	+	0.2	NA	intron (NR_110158, intron 5 of 7)	intron (NR_110158, intron 5 of 7)	54637	NR_110158	101928012	Hs.521131	NR_110158	ENSG00000223646	LOC101928012	-	uncharacterized LOC101928012	ncRNA
20.0666	chr14	49415636	49415762	+	0.2	NA	Intergenic	Intergenic	170681	NM_001030001	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29|uS14	ribosomal protein S29	protein-coding
65.2334	chr14	42492276	42492884	+	0.2	NA	Intergenic	Intergenic	885724	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
38-6	chr4	137837038	137837298	+	0.2	NA	Intergenic	L1MA5|LINE|L1	-251846	NR_038380	641364	Hs.570846	NR_038380	ENSG00000250033	SLC7A11-AS1	-	SLC7A11 antisense RNA 1	ncRNA
77.4667	chr3	190619011	190619416	+	0.2	NA	intron (NR_157352, intron 5 of 10)	intron (NR_157352, intron 5 of 10)	105128	NM_001364881	3556	Hs.478673	NM_002182	ENSG00000196083	IL1RAP	C3orf13|IL-1RAcP|IL1R3	interleukin 1 receptor accessory protein	protein-coding
47.8	chr3	41341967	41342271	+	0.2	NA	intron (NR_136342, intron 33 of 34)	intron (NR_136342, intron 33 of 34)	142614	NM_001330729	1499	Hs.476018	NM_001904	ENSG00000168036	CTNNB1	CTNNB|EVR7|MRD19|NEDSDV|armadillo	catenin beta 1	protein-coding
54	chr12	15601770	15602183	+	0.2	NA	Intergenic	Intergenic	55365	NM_030670	5800	Hs.160871	NM_002848	ENSG00000151490	PTPRO	GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O	protein tyrosine phosphatase receptor type O	protein-coding
63.9	chr11	33437350	33437787	+	0.2	NA	intron (NM_012194, intron 1 of 20)	MIRb|SINE|MIR	61460	NM_012194	25758	Hs.502266	NM_012194	ENSG00000110427	KIAA1549L	C11orf41|C11orf69|G2	KIAA1549 like	protein-coding
31.0333-10	chr7	74720811	74721391	+	0.2	NA	intron (NM_033000, intron 11 of 33)	AluSp|SINE|Alu	7817	NR_110044	101926943	Hs.654772	NR_110044	ENSG00000232729	LOC101926943	-	uncharacterized LOC101926943	ncRNA
56.2667	chr3	33488536	33488854	+	0.2	NA	Intergenic	Intergenic	-48290	NM_014517	7342	Hs.729120	NM_014517	ENSG00000153560	UBP1	LBP-1B|LBP-1a|LBP1A|LBP1B	upstream binding protein 1	protein-coding
29.8333-4	chr20	13350205	13350442	+	0.2	NA	Intergenic	L1MD|LINE|L1	-110636	NR_040043	100505536	Hs.665253	NR_040043		ISM1-AS1	-	ISM1 antisense RNA 1	ncRNA
25.8-13	chr2	7047464	7047686	+	0.2	NA	intron (NM_001349181, intron 8 of 9)	THE1A|LTR|ERVL-MaLR	30305	NR_110252	101929452		NR_110252	ENSG00000223884	LOC101929452	-	uncharacterized LOC101929452	ncRNA
35.5999	chr6	100857420	100857756	+	0.2	NA	3' UTR (NM_022091, exon 4 of 4)	3' UTR (NM_022091, exon 4 of 4)	23741	NM_006828	10973	Hs.486031	NM_006828	ENSG00000112249	ASCC3	ASC1p200|HELIC1|RNAH	activating signal cointegrator 1 complex subunit 3	protein-coding
24.4-24	chr5	12213035	12213231	+	0.2	NA	Intergenic	Intergenic	-308687	NM_001332	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
35.5-2	chr3	2181582	2181815	+	0.2	NA	intron (NM_175607, intron 2 of 24)	intron (NM_175607, intron 2 of 24)	-37457	NR_046555	100873976	Hs.611138	NR_046555	ENSG00000227588	CNTN4-AS2	-	CNTN4 antisense RNA 2	ncRNA
62.7	chr1	113627862	113628355	+	0.2	NA	intron (NM_001142782, intron 9 of 20)	L1MA3|LINE|L1	131047	NM_006608	10745	Hs.655824	NM_006608	ENSG00000116793	PHTF1	PHTF	putative homeodomain transcription factor 1	protein-coding
52-3	chr13	96284238	96284557	+	0.2	NA	intron (NM_153456, intron 1 of 1)	MLT2A2|LTR|ERVL	-142832	NR_039723	100616137		NR_039723	ENSG00000283487	MIR4501	-	microRNA 4501	ncRNA
30.8666	chr15	95707678	95708303	+	0.2	NA	Intergenic	Intergenic	274897	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA
37.5667	chr1	79662177	79662422	+	0.2	NA	Intergenic	Intergenic	-655569	NM_022159	64123	Hs.132314	NM_022159	ENSG00000162618	ADGRL4	ELTD1|ETL|KPG_003	adhesion G protein-coupled receptor L4	protein-coding
58.8334	chr1	43516362	43516949	+	0.2	NA	Intergenic	AluSx3|SINE|Alu	-9382	NM_001329137	5792	Hs.272062	NM_002840	ENSG00000142949	PTPRF	BNAH2|LAR	protein tyrosine phosphatase receptor type F	protein-coding
37.7334-2	chr3	127579433	127580064	+	0.2	NA	exon (NM_001353002, exon 4 of 12)	exon (NM_001353002, exon 4 of 12)	-4417	NR_106883	102466199		NR_106883	ENSG00000275067	MIR6825	hsa-mir-6825	microRNA 6825	ncRNA
26.6-9	chr17	49825038	49825305	+	0.2	NA	intron (NM_007067, intron 12 of 14)	L1MC5|LINE|L1	-20739	NM_001242791	729220	Hs.434138	NM_001242791		FLJ45513	-	uncharacterized LOC729220	protein-coding
44.4667-3	chr5	10017416	10017888	+	0.2	NA	Intergenic	LTR82B|LTR|ERVL	-113828	NR_027112	285692	Hs.651487	NR_027112	ENSG00000249781	LINC02112	-	long intergenic non-protein coding RNA 2112	ncRNA
78.0333	chr12	116072185	116072947	+	0.2	NA	intron (NM_015335, intron 4 of 30)	AluSx|SINE|Alu	76088	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA
36.0666-2	chr2	111162336	111162691	+	0.2	NA	intron (NM_001204110, intron 4 of 4)	intron (NM_001204110, intron 4 of 4)	41599	NM_001204109	10018	Hs.469658	NM_006538	ENSG00000153094	BCL2L11	BAM|BIM|BOD	BCL2 like 11	protein-coding
30.4334-3	chr18	2714003	2714168	+	0.2	NA	intron (NM_015295, intron 17 of 47)	L1M2|LINE|L1	58198	NM_015295	23347	Hs.8118	NM_015295	ENSG00000101596	SMCHD1	BAMS|FSHD2	structural maintenance of chromosomes flexible hinge domain containing 1	protein-coding
38.8-3	chr2	102994322	102994558	+	0.2	NA	Intergenic	L1MD3|LINE|L1	-10011	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
40.6	chr1	100311048	100311654	+	0.2	NA	Intergenic	L1ME3E|LINE|L1	30110	NR_030279	693138		NR_030279	ENSG00000207750	MIR553	MIRN553|hsa-mir-553	microRNA 553	ncRNA
29.8-8	chr6	134127472	134127756	+	0.2	NA	Intergenic	Intergenic	-9934	NR_037938	387065	Hs.571061	NR_037938		HMGA1P7	HMGA1L7	high mobility group AT-hook 1 pseudogene 7	pseudo
41.7	chr1	55074881	55075122	+	0.2	NA	intron (NM_015306, intron 63 of 67)	intron (NM_015306, intron 63 of 67)	34779	NR_110451	255738	Hs.18844	NM_174936	ENSG00000169174	PCSK9	FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9	proprotein convertase subtilisin/kexin type 9	protein-coding
47.8-6	chr8	122334019	122334450	+	0.2	NA	Intergenic	Intergenic	234410	NR_131202	105375734	Hs.628341	NR_131202		SMILR	-	smooth muscle induced lncRNA, enhancer of proliferation	ncRNA
55.1333-2	chr4	82331633	82332030	+	0.2	NA	Intergenic	Intergenic	42160	NM_031370	3184	Hs.480073	NM_002138	ENSG00000138668	HNRNPD	AUF1|AUF1A|HNRPD|P37|hnRNPD0	heterogeneous nuclear ribonucleoprotein D	protein-coding
25.5667-11	chr3	83830814	83831199	+	0.2	NA	Intergenic	L1MEh|LINE|L1	1038569	NR_033860	440970	Hs.411049	NR_033860	ENSG00000242641	LINC00971	-	long intergenic non-protein coding RNA 971	ncRNA
25.1333-11	chr5	144465734	144466122	+	0.2	NA	intron (NM_001370487, intron 2 of 2)	AluSq2|SINE|Alu	260537	NM_001370486	57528	Hs.7093	NM_020768	ENSG00000183775	KCTD16	-	potassium channel tetramerization domain containing 16	protein-coding
60.0665	chr8	119553354	119553792	+	0.2	NA	Intergenic	Intergenic	39435	NR_045555	5168	Hs.190977	NM_006209	ENSG00000136960	ENPP2	ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2	ectonucleotide pyrophosphatase/phosphodiesterase 2	protein-coding
39.6667-2	chr12	91816941	91817353	+	0.2	NA	Intergenic	Intergenic	324566	NR_046159	256021	Hs.651357	NM_001256373	ENSG00000257242	LINC01619	C12orf79	long intergenic non-protein coding RNA 1619	ncRNA
35.1333-3	chr16	4132839	4133170	+	0.2	NA	Intergenic	MIR3|SINE|MIR	-16562	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding
50.5001	chr11	5562421	5562701	+	0.2	NA	Intergenic	MIRc|SINE|MIR	-17038	NM_001005289	390067	Hs.554540	NM_001005289	ENSG00000181616	OR52H1	OR11-41|OR11-45	olfactory receptor family 52 subfamily H member 1	protein-coding
32-14	chr9	78996493	78996812	+	0.2	NA	Intergenic	L1MB7|LINE|L1	149014	NR_109771	101927450	Hs.738041	NR_109771	ENSG00000260995	LOC101927450	-	uncharacterized LOC101927450	ncRNA
42.3999	chr8	105414482	105414825	+	0.2	NA	intron (NM_001362837, intron 1 of 7)	Charlie4z|DNA|hAT-Charlie	95110	NM_001362837	23414	Hs.431009	NM_012082	ENSG00000169946	ZFPM2	DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2	zinc finger protein, FOG family member 2	protein-coding
28.6-2	chr10	79170240	79170447	+	0.2	NA	intron (NM_020338, intron 4 of 24)	intron (NM_020338, intron 4 of 24)	101377	NM_020338	57178	Hs.193118	NM_020338	ENSG00000108175	ZMIZ1	MIZ|RAI17|TRAFIP10|ZIMP10	zinc finger MIZ-type containing 1	protein-coding
26.2-13	chr2	196160131	196160621	+	0.2	NA	intron (NM_004226, intron 2 of 7)	intron (NM_004226, intron 2 of 7)	11202	NM_004226	9262	Hs.88297	NM_004226	ENSG00000081320	STK17B	DRAK2	serine/threonine kinase 17b	protein-coding
51-3	chr6	54755287	54755882	+	0.2	NA	Intergenic	Intergenic	-91187	NM_001010872	222584	Hs.152423	NM_001010872	ENSG00000168143	FAM83B	C6orf143	family with sequence similarity 83 member B	protein-coding
29.1667-12	chr6	75337423	75337815	+	0.2	NA	intron (NM_001300866, intron 4 of 6)	intron (NM_001300866, intron 4 of 6)	-45567	NR_125859	101928540	Hs.526972	NR_125859		LOC101928540	-	uncharacterized LOC101928540	ncRNA
29.2-10	chr5	42059148	42059497	+	0.2	NA	Intergenic	Intergenic	116023	NR_104635	101926960	Hs.365692	NR_104635		LOC101926960	-	uncharacterized LOC101926960	ncRNA
40.2-5	chr16	79775634	79775977	+	0.2	NA	intron (NR_104660, intron 1 of 3)	intron (NR_104660, intron 1 of 3)	-5273	NR_104663	102467146	Hs.657587	NR_104663	ENSG00000261390	MAFTRR	linc-MAF-4|lincMAF4	MAF transcriptional regulator RNA	ncRNA
40.1-2	chr3	39008302	39008683	+	0.2	NA	intron (NM_001349253, intron 2 of 29)	HAL1|LINE|L1	43452	NM_001349253	11280	Hs.591657	NM_014139	ENSG00000168356	SCN11A	FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2	sodium voltage-gated channel alpha subunit 11	protein-coding
30.7667-2	chr11	14490628	14490781	+	0.2	NA	intron (NM_016451, intron 4 of 21)	intron (NM_016451, intron 4 of 21)	9154	NM_016451	1315	Hs.339278	NM_016451	ENSG00000129083	COPB1	COPB	coatomer protein complex subunit beta 1	protein-coding
62.1333	chr7	70039644	70040072	+	0.2	NA	intron (NM_015570, intron 2 of 18)	L2c|LINE|L2	441383	NM_001127231	26053	Hs.21631	NM_015570	ENSG00000158321	AUTS2	FBRSL2|MRD26	activator of transcription and developmental regulator AUTS2	protein-coding
35.1333-9	chr7	90259607	90259807	+	0.2	NA	intron (NM_001039706, intron 3 of 22)	AluJr|SINE|Alu	14533	NM_001160138	79846	Hs.521014	NM_024788	ENSG00000105792	CFAP69	C7orf63|FAP69|SPGF24	cilia and flagella associated protein 69	protein-coding
14.4333-4	chr3	100810201	100810388	+	0.2	NA	intron (NM_001349332, intron 18 of 35)	intron (NM_001349332, intron 18 of 35)	100752	NM_001195478	10342	Hs.518123	NM_006070	ENSG00000114354	TFG	HMSNP|SPG57|TF6|TRKT3	trafficking from ER to golgi regulator	protein-coding
60.3999	chr18	78074333	78074786	+	0.2	NA	Intergenic	Intergenic	-80832	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA
44.0666	chr12	43778126	43778416	+	0.2	NA	exon (NM_001351342, exon 8 of 12)	exon (NM_001351342, exon 8 of 12)	19327	NM_001114182	51135	Hs.138499	NM_016123	ENSG00000198001	IRAK4	IPD1|IRAK-4|NY-REN-64|REN64	interleukin 1 receptor associated kinase 4	protein-coding
35.3333-3	chr11	6644890	6645149	+	0.2	NA	intron (NM_003737, intron 1 of 20)	MIRb|SINE|MIR	10790	NM_003737	8642	Hs.199850	NM_003737	ENSG00000166341	DCHS1	CDH19|CDH25|CDHR6|FIB1|MVP2|PCDH16|VMLDS1	dachsous cadherin-related 1	protein-coding
42-2	chr18	6085085	6085376	+	0.2	NA	intron (NM_001365766, intron 15 of 16)	L1ME3G|LINE|L1	-171514	NR_110765	101927150		NR_110765		L3MBTL4-AS1	-	L3MBTL4 antisense RNA 1	ncRNA
42.3-2	chr10	95867898	95868155	+	0.2	NA	3' UTR (NM_001312654, exon 10 of 10)	3' UTR (NM_001312654, exon 10 of 10)	-39939	NM_001349008	387707	Hs.652240	NM_001001732	ENSG00000188649	CC2D2B	C10orf130|C10orf131	coiled-coil and C2 domain containing 2B	protein-coding
31.1333-12	chr7	78199484	78199657	+	0.2	NA	intron (NM_001301128, intron 11 of 20)	MIR|SINE|MIR	-147672	NR_003680	399670	Hs.568045	NR_003680	ENSG00000231322	RPL13AP17	RPL13A_6_816	ribosomal protein L13a pseudogene 17	pseudo
44.7-6	chr8	66766135	66766557	+	0.2	NA	TTS (NR_002734)	TTS (NR_002734)	1688	NR_002734	26255	Hs.647156	NR_002734	ENSG00000213005	PTTG3P	PTTG3|rcPTTG1	pituitary tumor-transforming 3, pseudogene	pseudo
46.6666-3	chr18	22622547	22622957	+	0.2	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	164085	NR_110782	101927571	Hs.335020	NR_110782	ENSG00000266850	LOC101927571	-	uncharacterized LOC101927571	ncRNA
27.3333-8	chr4	141403819	141404056	+	0.2	NA	Intergenic	Intergenic	-71320	NR_121625	100507639	Hs.535010	NR_121625		LINC02432	-	long intergenic non-protein coding RNA 2432	ncRNA
67.1668	chr1	59267556	59268074	+	0.2	NA	Intergenic	Intergenic	-28998	NM_001350793	55277	Hs.444301	NM_018291	ENSG00000172456	FGGY	-	FGGY carbohydrate kinase domain containing	protein-coding
48.1333-2	chr10	115437427	115437729	+	0.2	NA	intron (NM_207303, intron 21 of 28)	intron (NM_207303, intron 21 of 28)	344213	NM_001276282	26033	Hs.501127	NM_207303	ENSG00000107518	ATRNL1	ALP|bA338L11.1|bA454H24.1	attractin like 1	protein-coding
37.4	chr1	45930802	45931172	+	0.2	NA	intron (NM_001324320, intron 4 of 29)	L1MC4|LINE|L1	66639	NM_001324321	23139	Hs.319481	NM_015112	ENSG00000086015	MAST2	MAST205|MTSSK	microtubule associated serine/threonine kinase 2	protein-coding
30.9333-10	chr9	103799986	103800214	+	0.2	NA	Intergenic	Intergenic	-199609	NR_109803	101928523		NR_109803	ENSG00000285483	LOC101928523	-	uncharacterized LOC101928523	ncRNA
46.9333-4	chr15	93555463	93555828	+	0.2	NA	Intergenic	Intergenic	-300915	NR_120321	101927153	Hs.371900	NR_120321		LINC02207	-	long intergenic non-protein coding RNA 2207	ncRNA
45.3999	chr1	244378083	244378420	+	0.2	NA	intron (NM_001276349, intron 3 of 3)	intron (NM_001276349, intron 3 of 3)	25616	NM_001012970	200159	Hs.442703	NM_001012970	ENSG00000173728	C1orf100	-	chromosome 1 open reading frame 100	protein-coding
62.8-3	chr7	25232876	25233341	+	0.2	NA	Intergenic	Intergenic	-4622	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding
35.1-4	chr2	62710644	62710901	+	0.2	NA	intron (NM_001142615, intron 2 of 22)	intron (NM_001142615, intron 2 of 22)	3875	NM_001354217	23301	Hs.271667	NM_015252	ENSG00000115504	EHBP1	HPC12|NACSIN	EH domain binding protein 1	protein-coding
30-16	chr9	135084746	135084985	+	0.2	NA	intron (NM_014279, intron 1 of 5)	intron (NM_014279, intron 1 of 5)	-2395	NM_001282612	10439	Hs.522484	NM_006334	ENSG00000130558	OLFM1	AMY|NOE1|NOELIN1|OlfA	olfactomedin 1	protein-coding
26.8667-3	chr12	120912769	120912939	+	0.2	NA	Intergenic	AluSq|SINE|Alu	8159	NR_131215	105500240	Hs.742757	NR_131215		XLOC_009911	-	uncharacterized LOC105500240	ncRNA
38.7-10	chr8	140015779	140016057	+	0.2	NA	intron (NM_001160372, intron 18 of 22)	intron (NM_001160372, intron 18 of 22)	84617	NR_144431	359809	Hs.26814	NR_144431	ENSG00000282164	PEG13	-	paternally expressed 13	ncRNA
69.6666-2	chr7	96151851	96152298	+	0.2	NA	intron (NM_001160210, intron 13 of 17)	MIR|SINE|MIR	67682	NR_030322	693176		NR_030322	ENSG00000208025	MIR591	MIRN591|hsa-mir-591	microRNA 591	ncRNA
37.6333-5	chr8	87112081	87112481	+	0.2	NA	intron (NM_173538, intron 4 of 10)	ERV3-16A3_I-int|LTR|ERVL	245866	NM_173538	168975	Hs.246284	NM_173538	ENSG00000176571	CNBD1	-	cyclic nucleotide binding domain containing 1	protein-coding
37.0333	chr11	29469653	29470213	+	0.2	NA	Intergenic	L1MA7|LINE|L1	-124480	NR_149107	105376606	Hs.577275	NR_149106	ENSG00000255117	LINC02546	-	long intergenic non-protein coding RNA 2546	ncRNA
25.9333-7	chr8	129621758	129622030	+	0.2	NA	intron (NR_130917, intron 1 of 3)	Tigger13a|DNA|TcMar-Tigger	-46876	NR_130919	137196	Hs.679457	NR_130917	ENSG00000229140	CCDC26	RAM	CCDC26 long non-coding RNA	ncRNA
26.3667-12	chr8	131471884	131472023	+	0.2	NA	Intergenic	THE1D-int|LTR|ERVL-MaLR	-431044	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
40.4-2	chr12	57160327	57160672	+	0.2	NA	intron (NM_002332, intron 12 of 88)	L2a|LINE|L2	-12880	NR_131939	105751187	Hs.609540	NR_131938	ENSG00000259125	LRP1-AS	-	LRP1 antisense RNA	ncRNA
52.9667	chr20	48782921	48783593	+	0.2	NA	intron (NM_020820, intron 1 of 39)	L2a|LINE|L2	44742	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1	protein-coding
37.4-5	chr3	110207313	110207631	+	0.2	NA	Intergenic	L1PREC2|LINE|L1	604644	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
50.0667-2	chr7	42677522	42678089	+	0.2	NA	intron (NR_110833, intron 1 of 2)	intron (NR_110833, intron 1 of 2)	28642	NR_110833	101928795	Hs.566753	NR_110833	ENSG00000238284	LINC01448	-	long intergenic non-protein coding RNA 1448	ncRNA
44.2334-2	chr17	75850928	75851439	+	0.2	NA	intron (NM_012478, intron 2 of 7)	intron (NM_012478, intron 2 of 7)	4152	NM_001330499	23558	Hs.514489	NM_012478	ENSG00000132471	WBP2	DFNB107|GRAMD6|WBP-2	WW domain binding protein 2	protein-coding
32.0667-3	chr2	140070168	140070348	+	0.2	NA	Intergenic	Intergenic	516427	NR_106979	102465692		NR_106979	ENSG00000283506	MIR7157	hsa-mir-7157	microRNA 7157	ncRNA
25.8-15	chr2	115756952	115757105	+	0.2	NA	intron (NM_001321907, intron 10 of 23)	MSTD|LTR|ERVL-MaLR	413213	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
55.9-5	chr8	119025612	119026223	+	0.2	NA	intron (NM_001324095, intron 1 of 7)	L2|LINE|L2	-41330	NM_006438	10584	Hs.176615	NM_006438	ENSG00000184374	COLEC10	3MC3|CL-34|CLL1	collectin subfamily member 10	protein-coding
35.5333-7	chr19	51850883	51851433	+	0.2	NA	intron (NR_163433, intron 6 of 11)	intron (NR_163433, intron 6 of 11)	36778	NM_001135590	84765	Hs.723015	NM_032679	ENSG00000161551	ZNF577	-	zinc finger protein 577	protein-coding
61.0666-2	chr14	55944277	55944812	+	0.2	NA	Intergenic	Intergenic	-147870	NR_026797	645687	Hs.569345	NR_026796	ENSG00000258791	LINC00520	C14orf34	long intergenic non-protein coding RNA 520	ncRNA
23.7-8	chr3	134877573	134877714	+	0.2	NA	intron (NM_004441, intron 1 of 15)	Chap1_Mam|DNA|hAT-Charlie	82383	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding
45.8-6	chr4	53734167	53734543	+	0.2	NA	TTS (NR_125918)	TTS (NR_125918)	38454	NR_125918	100506444	Hs.636176	NR_125918	ENSG00000249341	LOC100506444	-	uncharacterized LOC100506444	ncRNA
53.7333-2	chr3	59612266	59613036	+	0.2	NA	Intergenic	MIRb|SINE|MIR	45846	NR_149028	339902	Hs.132446	NR_149028		LOC339902	-	hCG1813818	ncRNA
35.6-3	chr12	13460768	13460979	+	0.2	NA	Intergenic	L1ME3B|LINE|L1	-84128	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA
63.1333	chr4	31410415	31410908	+	0.2	NA	Intergenic	Intergenic	-95883	NR_149122	105374565	Hs.112715	NR_149121		LINC02501	-	long intergenic non-protein coding RNA 2501	ncRNA
49.2666-2	chr10	64003272	64003634	+	0.2	NA	Intergenic	L1MC5a|LINE|L1	-481563	NM_001322258	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding
36.9667	chr12	63929375	63929688	+	0.2	NA	intron (NM_001346201, intron 1 of 21)	MER5B|DNA|hAT-Charlie	84831	NM_001346201	57522	Hs.210751	NM_020762	ENSG00000196935	SRGAP1	ARHGAP13|NMTC2	SLIT-ROBO Rho GTPase activating protein 1	protein-coding
28.6-14	chr2	193749263	193749485	+	0.2	NA	Intergenic	Intergenic	-594895	NR_110222	101927406	Hs.385793	NR_110222	ENSG00000225539	LINC01821	-	long intergenic non-protein coding RNA 1821	ncRNA
27.4-5	chr14	24640445	24640657	+	0.2	NA	Intergenic	Intergenic	-6361	NR_144343	3002	Hs.1051	NM_004131	ENSG00000100453	GZMB	C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT	granzyme B	protein-coding
33.2666-2	chr7	8179705	8179894	+	0.2	NA	intron (NM_001350836, intron 7 of 14)	intron (NM_001350836, intron 7 of 14)	82253	NM_001350825	3382	Hs.487561	NM_004968	ENSG00000003147	ICA1	ICA69|ICAp69	islet cell autoantigen 1	protein-coding
35.1333	chr1	247732298	247732592	+	0.2	NA	intron (NM_001355292, intron 4 of 4)	intron (NM_001355292, intron 4 of 4)	-6170	NM_001004732	343170		NM_001004732	ENSG00000153230	OR14K1	OR1-39|OR1.5.9|OR5AY1	olfactory receptor family 14 subfamily K member 1	protein-coding
42.7-6	chr8	121749546	121750186	+	0.2	NA	Intergenic	Intergenic	-108426	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
44.4	chr1	151233570	151233959	+	0.2	NA	intron (NM_001135637, intron 6 of 13)	intron (NM_001135637, intron 6 of 13)	-20970	NM_002810	5710	Hs.505059	NM_002810	ENSG00000159352	PSMD4	AF|AF-1|ASF|MCB1|Rpn10|S5A|pUB-R5	proteasome 26S subunit, non-ATPase 4	protein-coding
43.3-4	chr4	148656993	148657368	+	0.2	NA	Intergenic	Intergenic	-212482	NM_001354819	4306	Hs.163924	NM_000901	ENSG00000151623	NR3C2	MCR|MLR|MR|NR3C2VIT	nuclear receptor subfamily 3 group C member 2	protein-coding
33.3333-2	chr12	22058535	22058979	+	0.2	NA	intron (NR_135117, intron 4 of 6)	intron (NR_135117, intron 4 of 6)	12539	NM_018686	55907	Hs.311346	NM_018686	ENSG00000111726	CMAS	CSS	cytidine monophosphate N-acetylneuraminic acid synthetase	protein-coding
42.7-5	chr12	5913575	5914020	+	0.2	NA	intron (NM_001278596, intron 3 of 25)	MIRb|SINE|MIR	31462	NM_001364791	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding
48.6-3	chr13	34940194	34940617	+	0.2	NA	Intergenic	Intergenic	-1882	NM_015678	26960	Hs.491172	NM_015678	ENSG00000172915	NBEA	BCL8B|LYST2	neurobeachin	protein-coding
57.1334	chr2	240584022	240584369	+	0.2	NA	non-coding (NR_103792, exon 1 of 1)	non-coding (NR_103792, exon 1 of 1)	2121	NR_103792	101752400	Hs.585987	NR_103792	ENSG00000260942	CAPN10-DT	CAPN10-AS1|locus959	CAPN10 divergent transcript	ncRNA
49.6334	chr14	65765705	65766193	+	0.2	NA	Intergenic	MLT1J2|LTR|ERVL-MaLR	294847	NR_030355	693210		NR_030355	ENSG00000207781	MIR625	MIRN625|hsa-mir-625	microRNA 625	ncRNA
28.4666-3	chr17	61169531	61169812	+	0.2	NA	intron (NM_001330413, intron 23 of 25)	intron (NM_001330413, intron 23 of 25)	198033	NR_136397	101927855	Hs.662123	NR_136397	ENSG00000267131	LOC101927855	-	uncharacterized LOC101927855	ncRNA
43.4-4	chr6	65502200	65502503	+	0.2	NA	intron (NM_001292009, intron 2 of 43)	L1MC|LINE|L1	77453	NM_198283	346007	Hs.25067	NM_198283	ENSG00000188107	EYS	C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1	eyes shut homolog	protein-coding
48.1	chr1	110328202	110328613	+	0.2	NA	intron (NR_036595, intron 1 of 3)	MLT1J|LTR|ERVL-MaLR	10764	NR_036595	440600	Hs.649375	NR_036595	ENSG00000227963	RBM15-AS1	AS-RBM15	RBM15 antisense RNA 1	ncRNA
35.7333-5	chr14	99765838	99766053	+	0.2	NA	Intergenic	Intergenic	-27468	NM_004434	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	EMAP like 1	protein-coding
16.2-6	chr11	10759522	10759689	+	0.2	NA	intron (NM_014633, intron 5 of 24)	L2a|LINE|L2	8359	NM_014633	9646	Hs.725151	NM_014633	ENSG00000198730	CTR9	SH2BP1|TSBP|p150|p150TSP	CTR9 homolog, Paf1/RNA polymerase II complex component	protein-coding
18.7-8	chr3	9684766	9684883	+	0.2	NA	intron (NM_001077525, intron 11 of 18)	intron (NM_001077525, intron 11 of 18)	-19009	NM_001308388	151835	Hs.121335	NM_153635	ENSG00000144550	CPNE9	-	copine family member 9	protein-coding
51.5-2	chr17	71091520	71091918	+	0.2	NA	Intergenic	Intergenic	110460	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility 17	ncRNA
50.7667-4	chr3	81680750	81681220	+	0.2	NA	intron (NM_000158, intron 2 of 15)	MLT1A0|LTR|ERVL-MaLR	80660	NM_000158	2632	Hs.436062	NM_000158	ENSG00000114480	GBE1	APBD|GBE|GSD4	1,4-alpha-glucan branching enzyme 1	protein-coding
37.9-6	chr7	100981011	100981289	+	0.2	NA	intron (NM_001164462, intron 1 of 11)	L1ME4a|LINE|L1	11527	NM_001164462	10071	Hs.489355	NM_001164462	ENSG00000205277	MUC12	MUC-11|MUC-12|MUC11	mucin 12, cell surface associated	protein-coding
50.4-2	chr19	43577747	43578102	+	0.2	NA	intron (NM_001193621, intron 2 of 5)	intron (NM_001193621, intron 2 of 5)	1124	NM_001193621	390940	Hs.22049	NM_001193621	ENSG00000234465	PINLYP	-	phospholipase A2 inhibitor and LY6/PLAUR domain containing	protein-coding
62.6	chr11	97098809	97099383	+	0.2	NA	Intergenic	L1PA15-16|LINE|L1	590671	NR_135097	105369443	Hs.599377	NR_135097	ENSG00000256684	LINC02737	-	long intergenic non-protein coding RNA 2737	ncRNA
40.3667-3	chr7	87167523	87168046	+	0.2	NA	intron (NR_024550, intron 4 of 17)	intron (NR_024550, intron 4 of 17)	15230	NM_021145	9988	Hs.196129	NM_021145	ENSG00000135164	DMTF1	DMP1|DMTF|MRUL|hDMP1	cyclin D binding myb like transcription factor 1	protein-coding
54.2-3	chr11	107316335	107316731	+	0.2	NA	Intergenic	L1MC4|LINE|L1	141313	NM_152434	143884	Hs.212140	NM_152434	ENSG00000152404	CWF19L2	-	CWF19 like cell cycle control factor 2	protein-coding
25.1-12	chr6	37951534	37951744	+	0.2	NA	intron (NM_021943, intron 2 of 5)	L1PA15|LINE|L1	131912	NM_021943	60685	Hs.36959	NM_021943	ENSG00000156639	ZFAND3	TEX27	zinc finger AN1-type containing 3	protein-coding
44.7333-2	chr3	89537392	89537763	+	0.2	NA	Intergenic	(TCTCT)n|Simple_repeat|Simple_repeat	429956	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
101.1	chr1	211763762	211764559	+	0.2	NA	intron (NM_014873, intron 6 of 7)	AluSx|SINE|Alu	-65477	NR_135818	102723727	Hs.147656	NR_135818	ENSG00000229258	LPGAT1-AS1	-	LPGAT1 antisense RNA 1	ncRNA
22.3-6	chr2	96490158	96490299	+	0.2	NA	Intergenic	L1MA9|LINE|L1	15129	NM_001285486	93082	Hs.149219	NM_001080535	ENSG00000163121	NEURL3	LINCR|RNF132	neuralized E3 ubiquitin protein ligase 3	protein-coding
43.2-5	chr2	96887480	96887763	+	0.2	NA	intron (NM_001122646, intron 14 of 16)	intron (NM_001122646, intron 14 of 16)	7541	NM_001172667	51252	Hs.107922	NM_016490	ENSG00000168754	FAM178B	-	family with sequence similarity 178 member B	protein-coding
25.1-13	chr8	140965958	140966207	+	0.2	NA	intron (NM_001352719, intron 1 of 32)	intron (NM_001352719, intron 1 of 32)	34922	NM_001352710	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding
34.4667-3	chr2	217245370	217245718	+	0.2	NA	Intergenic	Charlie7a|DNA|hAT-Charlie	-37189	NR_133642	105373877		NR_133642		DIRC3-AS1	-	DIRC3 antisense RNA 1	ncRNA
56.8666	chr17	44929432	44929873	+	0.2	NA	intron (NM_001265577, intron 11 of 15)	MIR|SINE|MIR	5029	NR_106841	102466734		NR_106841	ENSG00000278223	MIR6783	hsa-mir-6783	microRNA 6783	ncRNA
34.8-9	chr5	133505635	133505968	+	0.2	NA	intron (NM_015082, intron 3 of 15)	intron (NM_015082, intron 3 of 15)	-78095	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA
63.6666	chr9	36874011	36874561	+	0.2	NA	intron (NM_001280549, intron 6 of 7)	intron (NM_001280549, intron 6 of 7)	-9978	NR_039766	100616278		NR_039766	ENSG00000264922	MIR4540	-	microRNA 4540	ncRNA
38.3333-5	chr3	47123595	47123930	+	0.2	NA	exon (NM_001349370, exon 2 of 20)	exon (NM_001349370, exon 2 of 20)	40215	NM_014159	29072	Hs.517941	NM_012271	ENSG00000181555	SETD2	HBP231|HIF-1|HIP-1|HSPC069|HYPB|KMT3A|LLS|SET2|p231HBP	SET domain containing 2, histone lysine methyltransferase	protein-coding
41-5	chr17	81876219	81876563	+	0.2	NA	Intergenic	AluSg|SINE|Alu	-5054	NM_001301240	396	Hs.159161	NM_004309	ENSG00000141522	ARHGDIA	GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1	Rho GDP dissociation inhibitor alpha	protein-coding
42.7333-4	chr7	140745249	140745724	+	0.2	NA	intron (NR_148928, intron 16 of 17)	intron (NR_148928, intron 16 of 17)	-48409	NR_024454	100134713	Hs.534141	NR_024454	ENSG00000240889	NDUFB2-AS1	-	NDUFB2 antisense RNA 1	ncRNA
46.4667	chr22	27203499	27203995	+	0.2	NA	Intergenic	Intergenic	16231	NM_001318392	105372977	Hs.743180	NM_001318392		LOC105372977	-	uncharacterized LOC105372977	protein-coding
28.3333-10	chr20	33384919	33385100	+	0.2	NA	intron (NM_001365728, intron 7 of 14)	intron (NM_001365728, intron 7 of 14)	16510	NM_016408	51654	Hs.435952	NM_016082	ENSG00000101391	CDK5RAP1	C20orf34|C42|CGI-05|HSPC167	CDK5 regulatory subunit associated protein 1	protein-coding
42.3999-2	chr8	118519657	118519960	+	0.2	NA	intron (NM_001101676, intron 2 of 4)	intron (NM_001101676, intron 2 of 4)	-101193	NR_038210	552860	Hs.571527	NR_038210	ENSG00000281641	SAMD12-AS1	C8orf26|NCRNA00252	SAMD12 antisense RNA 1	ncRNA
25.7667-4	chr19	21879820	21880023	+	0.2	NA	Intergenic	BSR/Beta|Satellite|Satellite	-27853	NM_001256653	7594	Hs.534365	NM_003423	ENSG00000198521	ZNF43	HTF6|KOX27|ZNF39L1	zinc finger protein 43	protein-coding
49.9001-2	chr7	145973410	145973692	+	0.2	NA	Intergenic	L1M1|LINE|L1	-800720	NM_014141	26047	Hs.655684	NM_014141	ENSG00000174469	CNTNAP2	AUTS15|CASPR2|CDFE|NRXN4|PTHSL1	contactin associated protein like 2	protein-coding
46.0666	chr7	109984396	109984792	+	0.2	NA	Intergenic	L1MEd|LINE|L1	-24381	NR_003024	442720	Hs.530096	NR_003024	ENSG00000237064	EIF3IP1	RG208K23	eukaryotic translation initiation factor 3 subunit I pseudogene 1	pseudo
32.9	chr1	182616211	182616433	+	0.2	NA	non-coding (NR_036490, exon 1 of 1)	non-coding (NR_036490, exon 1 of 1)	1182	NR_036490	284648	Hs.253475	NR_036490	ENSG00000261504	LINC01686	-	long intergenic non-protein coding RNA 1686	ncRNA
51.1-2	chr5	65424354	65424730	+	0.2	NA	intron (NR_135689, intron 7 of 25)	intron (NR_135689, intron 7 of 25)	57378	NM_197941	11174	Hs.482291	NM_197941	ENSG00000049192	ADAMTS6	ADAM-TS 6|ADAM-TS6|ADAMTS-6	ADAM metallopeptidase with thrombospondin type 1 motif 6	protein-coding
36.2667-9	chr8	84203712	84203924	+	0.2	NA	intron (NM_001354323, intron 1 of 7)	intron (NM_001354323, intron 1 of 7)	19152	NM_001354321	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
48.1-2	chr13	82821671	82821965	+	0.2	NA	Intergenic	Intergenic	1060575	NM_052910	114798	Hs.415478	NM_052910	ENSG00000178235	SLITRK1	LRRC12|TTM	SLIT and NTRK like family member 1	protein-coding
54.6667	chr1	18349734	18350020	+	0.2	NA	intron (NM_032880, intron 4 of 9)	FLAM_C|SINE|Alu	-131053	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding
24.7-3	chr11	11789623	11789752	+	0.2	NA	Intergenic	L1MC4a|LINE|L1	-6465	NR_107037	102465870		NR_107037	ENSG00000278529	MIR8070	hsa-mir-8070	microRNA 8070	ncRNA
47.2	chr10	45643336	45643772	+	0.2	NA	intron (NR_104256, intron 5 of 6)	AluSc8|SINE|Alu	29178	NM_001282905	93550	Hs.89029	NM_174890	ENSG00000172671	ZFAND4	ANUBL1	zinc finger AN1-type containing 4	protein-coding
56.7667	chr19	36795347	36795667	+	0.2	NA	Intergenic	Intergenic	-2043	NR_040027	284408	Hs.570010	NR_040027	ENSG00000267254	ZNF790-AS1	-	ZNF790 antisense RNA 1	ncRNA
23.1333-9	chr7	122199242	122199443	+	0.2	NA	Intergenic	MLT1J2|LTR|ERVL-MaLR	-55093	NM_005763	10157	Hs.156738	NM_005763	ENSG00000008311	AASS	LKR/SDH|LKRSDH|LORSDH	aminoadipate-semialdehyde synthase	protein-coding
23.0667-13	chr3	24341889	24342080	+	0.2	NA	intron (NM_001354708, intron 1 of 9)	MLT1H|LTR|ERVL-MaLR	-152103	NR_046244	644990	Hs.631912	NR_046244		THRB-AS1	-	THRB antisense RNA 1	ncRNA
24.7-12	chr6	26455832	26455967	+	0.2	NA	Intergenic	Intergenic	-2005	NM_001197233	11120	Hs.159028	NM_007049	ENSG00000112763	BTN2A1	BK14H9.1|BT2.1|BTF1|BTN2.1|DJ3E1.1	butyrophilin subfamily 2 member A1	protein-coding
37.2-3	chr14	54642213	54642482	+	0.2	NA	intron (NM_015589, intron 1 of 11)	intron (NM_015589, intron 1 of 11)	74735	NM_015589	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding
50.3333-3	chr5	118178268	118178645	+	0.2	NA	intron (NR_104997, intron 2 of 2)	intron (NR_104997, intron 2 of 2)	-104118	NR_104609	100505811	Hs.369776	NR_104609	ENSG00000250427	LINC02148	HNCAT21	long intergenic non-protein coding RNA 2148	ncRNA
36.8334	chr12	5595110	5595447	+	0.2	NA	intron (NM_001278596, intron 21 of 25)	AluJr|SINE|Alu	101146	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding
21.9333-17	chr5	81776811	81777014	+	0.2	NA	Intergenic	MIRb|SINE|MIR	-25659	NM_001256734	23635	Hs.102735	NM_012446	ENSG00000145687	SSBP2	HSPC116|SOSS-B2	single stranded DNA binding protein 2	protein-coding
44.7-5	chr5	173779506	173779904	+	0.2	NA	Intergenic	AluSx|SINE|Alu	11237	NR_108028	101928154	Hs.366725	NR_108028		LINC01485	-	long intergenic non-protein coding RNA 1485	ncRNA
56.2666	chr21	23383465	23383902	+	0.2	NA	intron (NR_040254, intron 1 of 4)	L1M4|LINE|L1	1152	NR_040254	266917	Hs.145622	NR_040254	ENSG00000228592	D21S2088E	-	D21S2088E	ncRNA
52-2	chr12	66420901	66421299	+	0.2	NA	intron (NM_001366722, intron 14 of 24)	intron (NM_001366722, intron 14 of 24)	118555	NM_033647	92797	Hs.505941	NM_033647	ENSG00000127311	HELB	DHB|hDHB	DNA helicase B	protein-coding
52.0001	chr1	98087429	98087912	+	0.2	NA	Intergenic	Intergenic	-37977	NR_046105	400765	Hs.451802	NM_001001688	ENSG00000225206	MIR137HG	-	MIR137 host gene	ncRNA
40.0334-2	chr8	131623426	131623677	+	0.2	NA	Intergenic	Intergenic	-280542	NR_136615	23167	Hs.204564	NM_015137	ENSG00000132294	EFR3A	-	EFR3 homolog A	protein-coding
34.3-2	chr18	5783650	5783930	+	0.2	NA	intron (NR_038839, intron 3 of 4)	LTR49-int|LTR|ERV1	34971	NR_038839	645355	Hs.632356	NR_038839	ENSG00000261738	MIR3976HG	LINC01469	MIR3976 host gene	ncRNA
70.1-2	chr7	89576992	89577477	+	0.2	NA	Intergenic	L1PREC2|LINE|L1	-542166	NR_003551	442523	Hs.406964	NR_003551	ENSG00000235436	DPY19L2P4	-	DPY19L2 pseudogene 4	pseudo
22.8334-2	chr2	56431658	56431812	+	0.2	NA	Intergenic	Intergenic	-245965	NR_125368	100129434	Hs.580330	NR_125368		LOC100129434	-	uncharacterized LOC100129434	ncRNA
46.2-5	chr3	195266041	195266480	+	0.2	NA	intron (NM_152531, intron 1 of 3)	AluSc|SINE|Alu	4899	NM_152531	152002	Hs.478741	NM_152531	ENSG00000173950	XXYLT1	C3orf21	xyloside xylosyltransferase 1	protein-coding
25.1333-12	chr5	146395899	146396058	+	0.2	NA	Intergenic	AluJb|SINE|Alu	-51355	NM_001040006	10915	Hs.443465	NM_006706	ENSG00000113649	TCERG1	CA150|TAF2S|Urn1	transcription elongation regulator 1	protein-coding
39.2667-5	chr5	165713814	165714301	+	0.2	NA	Intergenic	Intergenic	1212313	NR_108020	102557615		NR_108020	ENSG00000254130	LINC01947	CTB-7E3.1	long intergenic non-protein coding RNA 1947	ncRNA
15.3-15	chrX	99532773	99532865	+	0.2	NA	Intergenic	LTR78|LTR|ERV1	877454	NM_020766	57526	Hs.4993	NM_020766	ENSG00000165194	PCDH19	EFMR|EIEE9	protocadherin 19	protein-coding
49.0667	chr10	78597579	78597976	+	0.2	NA	Intergenic	Intergenic	330435	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA
36.7667-7	chr7	121201413	121201905	+	0.2	NA	intron (NM_001105533, intron 15 of 17)	intron (NM_001105533, intron 15 of 17)	-123708	NM_016087	51384	Hs.272375	NM_016087	ENSG00000002745	WNT16	-	Wnt family member 16	protein-coding
27.1333-12	chr5	28131282	28131506	+	0.2	NA	Intergenic	Intergenic	156271	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
61.8333	chr4	52608747	52609460	+	0.2	NA	intron (NM_001286768, intron 6 of 9)	intron (NM_001286768, intron 6 of 9)	47436	NM_001134223	64854	Hs.7966	NM_022832	ENSG00000109189	USP46	-	ubiquitin specific peptidase 46	protein-coding
34.0334	chr4	101210367	101210620	+	0.2	NA	intron (NM_001130691, intron 1 of 12)	MIR|SINE|MIR	30379	NR_107033	102465868		NR_107033	ENSG00000273882	MIR8066	hsa-mir-8066	microRNA 8066	ncRNA
45.8667	chr11	44357700	44358091	+	0.2	NA	Intergenic	Intergenic	-47756	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding
59.9	chr16	85793748	85794214	+	0.2	NA	intron (NM_006067, intron 1 of 4)	intron (NM_006067, intron 1 of 4)	1566	NR_135193	101928557	Hs.662217	NR_135193	ENSG00000270159	LOC101928557	-	uncharacterized LOC101928557	ncRNA
58.9999	chr13	78704430	78704949	+	0.2	NA	Intergenic	L1PA13|LINE|L1	-45534	NM_024546	79596	Hs.567576	NM_024546	ENSG00000152193	OBI1	C13orf7|RNF219	ORC ubiquitin ligase 1	protein-coding
30.0333-4	chr17	63591112	63591566	+	0.2	NA	3' UTR (NM_005828, exon 7 of 7)	3' UTR (NM_005828, exon 7 of 7)	-9556	NM_016360	51204	Hs.174134	NM_016360	ENSG00000136463	TACO1	CCDC44	translational activator of cytochrome c oxidase I	protein-coding
45.8666	chr8	110814481	110814805	+	0.2	NA	Intergenic	Intergenic	212790	NR_125417	101927459	Hs.575543	NR_125416	ENSG00000253877	LINC01608	-	long intergenic non-protein coding RNA 1608	ncRNA
69.2667	chr2	229207976	229208403	+	0.2	NA	intron (NM_001100818, intron 1 of 2)	intron (NM_001100818, intron 1 of 2)	23903	NM_001330156	55022	Hs.745038	NM_017933	ENSG00000153823	PID1	HMFN2073|NYGGF4|P-CLI1|PCLI1	phosphotyrosine interaction domain containing 1	protein-coding
28.8-16	chr9	34844145	34844409	+	0.2	NA	Intergenic	L1ME1|LINE|L1	-5691	NR_024481	389715	Hs.713965	NM_001126494		FAM205BP	C9orf144|C9orf144A|FAM205B	transmembrane protein C9orf144B pseudogene	pseudo
56.4	chr3	128617752	128618286	+	0.2	NA	Intergenic	CpG	32799	NM_002950	6184	Hs.518244	NM_002950	ENSG00000163902	RPN1	OST1|RBPH1	ribophorin I	protein-coding
39.1667-7	chrX	79914907	79915257	+	0.2	NA	Intergenic	L1MA5|LINE|L1	-99671	NM_001109879	50945	Hs.374253	NM_016954	ENSG00000122145	TBX22	ABERS|CLPA|CPX|TBXX|dJ795G23.1	T-box transcription factor 22	protein-coding
52.5	chr6	37198126	37198422	+	0.2	NA	Intergenic	L1PB4|LINE|L1	28122	NM_001243186	5292	Hs.81170	NM_002648	ENSG00000137193	PIM1	PIM	Pim-1 proto-oncogene, serine/threonine kinase	protein-coding
23.8667-3	chr12	49785210	49785354	+	0.2	NA	Intergenic	AluJr4|SINE|Alu	43131	NM_001368048	57701	Hs.143067	NM_001037806	ENSG00000167566	NCKAP5L	Cep169|FP1193|KIAA1602	NCK associated protein 5 like	protein-coding
30.5999-2	chr3	172065584	172065844	+	0.2	NA	intron (NM_001135095, intron 1 of 25)	intron (NM_001135095, intron 1 of 25)	25183	NM_001135095	64778	Hs.744888	NM_022763	ENSG00000075420	FNDC3B	FAD104|PRO4979|YVTM2421	fibronectin type III domain containing 3B	protein-coding
66.3333	chr9	105141257	105141691	+	0.2	NA	Intergenic	Intergenic	-103131	NM_001330731	23446	Hs.573495	NM_022109	ENSG00000070214	SLC44A1	CD92|CDW92|CHTL1|CTL1	solute carrier family 44 member 1	protein-coding
23.6666-2	chr3	15017291	15017495	+	0.2	NA	intron (NM_003298, intron 5 of 14)	intron (NM_003298, intron 5 of 14)	47922	NR_135247	64432	Hs.657764	NM_022497	ENSG00000131368	MRPS25	MRP-S25|RPMS25	mitochondrial ribosomal protein S25	protein-coding
48.0667-4	chr8	108687992	108688298	+	0.2	NA	intron (NR_136411, intron 1 of 3)	L1ME3G|LINE|L1	99449	NR_136411	157753	Hs.99439	NM_153015	ENSG00000164841	TMEM74	NET36	transmembrane protein 74	protein-coding
39.9333	chr10	72340092	72340624	+	0.2	NA	intron (NR_157570, intron 5 of 8)	AluSx|SINE|Alu	14561	NR_157570	54788	Hs.500013	NM_017626	ENSG00000148719	DNAJB12	DJ10	DnaJ heat shock protein family (Hsp40) member B12	protein-coding
51.3333-5	chr8	136127352	136127684	+	0.2	NA	Intergenic	Intergenic	-403280	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
29.3-8	chr7	11217438	11217623	+	0.2	NA	Intergenic	Intergenic	243658	NM_001007157	9678	Hs.655688	NM_014660	ENSG00000106443	PHF14	-	PHD finger protein 14	protein-coding
29-9	chr20	38590494	38590768	+	0.2	NA	Intergenic	Intergenic	9434	NR_130907	149685	Hs.368028	NM_174906	ENSG00000182035	ADIG	SMAF1	adipogenin	protein-coding
30.7-10	chrX	46621788	46622044	+	0.2	NA	intron (NM_001257291, intron 14 of 16)	intron (NM_001257291, intron 14 of 16)	48151	NM_019886	56548	Hs.129955	NM_019886	ENSG00000147119	CHST7	C6ST-2|GST-5	carbohydrate sulfotransferase 7	protein-coding
35.2666-3	chr22	24466355	24466591	+	0.2	NA	intron (NR_028483, intron 3 of 7)	intron (NR_028483, intron 3 of 7)	28601	NR_028483	646023	Hs.632761	NM_001039784	ENSG00000178803	ADORA2A-AS1	C22orf45	ADORA2A antisense RNA 1	ncRNA
25.5333-9	chr5	18018904	18019184	+	0.2	NA	Intergenic	Intergenic	211770	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
58.8668	chr1	18507580	18507957	+	0.2	NA	Intergenic	L1PA17|LINE|L1	26838	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding
38.8-5	chr8	117590442	117590664	+	0.2	NA	Intergenic	L1MD2|LINE|L1	69840	NM_080651	90390	Hs.492612	NM_080651	ENSG00000164758	MED30	MED30S|THRAP6|TRAP25	mediator complex subunit 30	protein-coding
29.1334-3	chr20	24527189	24527530	+	0.2	NA	intron (NM_001323606, intron 2 of 4)	L1MEd|LINE|L1	57398	NR_147606	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding
69.7-2	chr5	146180205	146180735	+	0.2	NA	intron (NM_016460, intron 1 of 30)	AluSz|SINE|Alu	2180	NM_020117	51520	Hs.432674	NM_016460	ENSG00000133706	LARS	HSPC192|ILFS1|LARS1|LEURS|LEUS|LFIS|LRS|PIG44|RNTLS|hr025Cl	leucyl-tRNA synthetase	protein-coding
71.1666	chr17	64104167	64104995	+	0.2	NA	intron (NM_001433, intron 1 of 21)	AluSx|SINE|Alu	25563	NM_001433	2081	Hs.133982	NM_001433	ENSG00000178607	ERN1	IRE1|IRE1P|IRE1a|hIRE1p	endoplasmic reticulum to nucleus signaling 1	protein-coding
50.7-2	chr15	96679824	96680224	+	0.2	NA	Intergenic	Intergenic	101630	NR_102754	100652749	Hs.303588	NR_102753	ENSG00000259282	SPATA8-AS1	-	SPATA8 antisense RNA 1 (head to head)	ncRNA
32.3333-4	chr15	56769641	56769945	+	0.2	NA	Intergenic	LTR84a|LTR|ERVL	-35707	NM_001288588	54816	Hs.511477	NM_017661	ENSG00000137871	ZNF280D	SUHW4|ZNF634	zinc finger protein 280D	protein-coding
41.2-3	chr16	25295725	25295964	+	0.2	NA	Intergenic	AluJr|SINE|Alu	-37999	NM_001012981	342357	Hs.513451	NM_001012981	ENSG00000155592	ZKSCAN2	ZNF694|ZSCAN31|ZSCAN34	zinc finger with KRAB and SCAN domains 2	protein-coding
40.4667	chr3	178504886	178505330	+	0.2	NA	Intergenic	Intergenic	-31328	NM_181361	10242	Hs.478368	NM_005832	ENSG00000197584	KCNMB2	-	potassium calcium-activated channel subfamily M regulatory beta subunit 2	protein-coding
21.2-12	chr17	34428837	34429023	+	0.2	NA	Intergenic	L1MB7|LINE|L1	-65697	NM_002981	6346	Hs.72918	NM_002981	ENSG00000108702	CCL1	I-309|P500|SCYA1|SISe|TCA3	C-C motif chemokine ligand 1	protein-coding
32.3333-12	chr8	138771544	138771735	+	0.2	NA	intron (NM_152888, intron 16 of 64)	intron (NM_152888, intron 16 of 64)	142402	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
27-14	chr2	43590664	43590820	+	0.2	NA	intron (NM_001083953, intron 4 of 37)	intron (NM_001083953, intron 4 of 37)	5232	NM_001083953	63892	Hs.369592	NM_022065	ENSG00000115970	THADA	ARMC13|GITA	THADA armadillo repeat containing	protein-coding
42.0666-2	chr14	72069477	72069759	+	0.2	NA	intron (NM_001370288, intron 2 of 16)	AluJb|SINE|Alu	136091	NM_001370293	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G protein signaling 6	protein-coding
44.2	chr13	84495957	84496267	+	0.2	NA	intron (NR_046871, intron 3 of 6)	L1PA8|LINE|L1	-287542	NR_132852	106635542		NR_132852		SNORA107	-	small nucleolar RNA, H/ACA box 107	snoRNA
76.5	chr1	30293153	30293549	+	0.2	NA	Intergenic	L1MC3|LINE|L1	-255739	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA
54.8	chr1	25727610	25727925	+	0.2	NA	intron (NM_020379, intron 2 of 11)	intron (NM_020379, intron 2 of 11)	-72426	NM_020451	57190	Hs.323396	NM_020451	ENSG00000162430	SELENON	CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1	selenoprotein N	protein-coding
32.7333-7	chr3	96973878	96974481	+	0.2	NA	intron (NM_001080448, intron 2 of 17)	intron (NM_001080448, intron 2 of 17)	159585	NM_001278301	285220	Hs.272208	NM_173655	ENSG00000080224	EPHA6	EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066	EPH receptor A6	protein-coding
40.6667-8	chr6	21490436	21490895	+	0.2	NA	intron (NR_103790, intron 2 of 3)	intron (NR_103790, intron 2 of 3)	21227	NR_103790	100874531	Hs.112750	NR_103790	ENSG00000280989	LINC00581	linc-MBOAT1-4	long intergenic non-protein coding RNA 581	ncRNA
30-5	chr11	99005626	99005896	+	0.2	NA	Intergenic	Intergenic	-15188	NM_014361	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
27.4-14	chr5	31245692	31245836	+	0.2	NA	intron (NM_001362435, intron 1 of 10)	intron (NM_001362435, intron 1 of 10)	52078	NM_001362435	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
44.0001	chr4	130252457	130252705	+	0.2	NA	Intergenic	Intergenic	-123780	NR_147186	105377420		NR_147186		LINC02479	-	long intergenic non-protein coding RNA 2479	ncRNA
38.0333-3	chr3	194339256	194339598	+	0.2	NA	TTS (NM_001291988)	TTS (NM_001291988)	11901	NM_001291988	1370	Hs.528368	NM_001309	ENSG00000178772	CPN2	ACBP	carboxypeptidase N subunit 2	protein-coding
32.7667-2	chr11	80311984	80312511	+	0.2	NA	Intergenic	Intergenic	450556	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
22.7333-8	chr7	12768537	12768735	+	0.2	NA	Intergenic	Intergenic	81003	NM_005738	10124	Hs.245540	NM_005738	ENSG00000122644	ARL4A	ARL4	ADP ribosylation factor like GTPase 4A	protein-coding
31.2333-6	chr3	130378872	130379178	+	0.2	NA	intron (NM_001278298, intron 3 of 40)	intron (NM_001278298, intron 3 of 40)	33509	NR_022012	256076	Hs.205403	NM_153264	ENSG00000172752	COL6A5	COL29A1|VWA4	collagen type VI alpha 5 chain	protein-coding
35.1333-4	chr2	160073531	160073753	+	0.2	NA	Intergenic	L1ME1|LINE|L1	-11027	NM_001007267	22925	Hs.410477	NM_007366	ENSG00000153246	PLA2R1	CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R	phospholipase A2 receptor 1	protein-coding
26.4333-14	chr4	86534342	86534474	+	0.2	NA	Intergenic	L1MD3|LINE|L1	8144	NR_039657	100616463		NR_039657	ENSG00000266515	MIR4452	-	microRNA 4452	ncRNA
35.7333	chr1	188049668	188050084	+	0.2	NA	Intergenic	L1MB7|LINE|L1	606248	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
44-5	chr3	66223668	66224019	+	0.2	NA	intron (NM_001350992, intron 1 of 8)	intron (NM_001350992, intron 1 of 8)	2840	NM_001350991	115286	Hs.379386	NM_173471	ENSG00000144741	SLC25A26	COXPD28|SAMC	solute carrier family 25 member 26	protein-coding
34.4334-2	chr11	82312370	82312636	+	0.2	NA	intron (NR_120571, intron 3 of 7)	MLT1D-int|LTR|ERVL-MaLR	91410	NR_120571	101928989	Hs.145117	NR_120571	ENSG00000245832	MIR4300HG	-	MIR4300 host gene	ncRNA
37.2667-7	chr6	22556856	22557114	+	0.2	NA	Intergenic	L1ME5|LINE|L1	-12581	NM_138574	154150	Hs.629246	NM_138574	ENSG00000112273	HDGFL1	HRP-1|Hdgfrp1|PWWP1|dJ309H15.1	HDGF like 1	protein-coding
27.6666-3	chr21	23470510	23470766	+	0.2	NA	Intergenic	Intergenic	-85803	NR_040254	266917	Hs.145622	NR_040254	ENSG00000228592	D21S2088E	-	D21S2088E	ncRNA
31.6667-6	chr2	102159026	102159194	+	0.2	NA	intron (NM_001320978, intron 3 of 11)	L2a|LINE|L2	5169	NM_001320983	3554	Hs.701982	NM_000877	ENSG00000115594	IL1R1	CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80	interleukin 1 receptor type 1	protein-coding
14.3667-6	chr18	32520810	32520931	+	0.2	NA	Intergenic	Intergenic	9207	NR_003558	441818	Hs.549773	NR_003558	ENSG00000260389	WBP11P1	HsT3017	WW domain binding protein 11 pseudogene 1	pseudo
38.7-7	chr3	189973918	189974145	+	0.2	NA	intron (NM_018192, intron 9 of 14)	intron (NM_018192, intron 9 of 14)	144109	NR_030642	100126340		NR_030642	ENSG00000216058	MIR944	MIRN944|hsa-mir-944|mir-944	microRNA 944	ncRNA
43.2	chr1	164695375	164695798	+	0.2	NA	intron (NM_001204963, intron 2 of 8)	L2c|LINE|L2	79055	NR_038072	100505795	Hs.661039	NR_038072	ENSG00000233693	LOC100505795	-	uncharacterized LOC100505795	ncRNA
35.2-3	chr15	46364962	46365243	+	0.2	NA	Intergenic	Charlie29a|DNA|hAT-Charlie	659907	NR_135680	105370802	Hs.447522	NR_135680	ENSG00000259200	LOC105370802	-	uncharacterized LOC105370802	ncRNA
42.1333-3	chr9	13960099	13960373	+	0.2	NA	Intergenic	Intergenic	32265	NR_038194	100113404	Hs.149786	NR_038194	ENSG00000205636	LINC00583	C9orf146	long intergenic non-protein coding RNA 583	ncRNA
40.3667	chr15	96828271	96828791	+	0.2	NA	Intergenic	AluSx|SINE|Alu	45096	NR_158221	145946	Hs.326528	NM_173499	ENSG00000185594	SPATA8	SRG8	spermatogenesis associated 8	ncRNA
51	chr1	74649200	74649678	+	0.2	NA	intron (NM_001002912, intron 1 of 14)	intron (NM_001002912, intron 1 of 14)	24353	NM_001002912	127254	Hs.531182	NM_001002912	ENSG00000178965	ERICH3	C1orf173	glutamate rich 3	protein-coding
62.5	chr11	20475484	20475933	+	0.2	NA	intron (NM_005788, intron 13 of 15)	AluSx|SINE|Alu	87992	NM_005788	10196	Hs.152337	NM_005788	ENSG00000185238	PRMT3	HRMT1L3	protein arginine methyltransferase 3	protein-coding
38.9667-6	chr4	94788222	94788633	+	0.2	NA	intron (NM_001203, intron 1 of 12)	ERV3-16A3_I-int|LTR|ERVL	30472	NM_001203	658	Hs.598475	NM_001203	ENSG00000138696	BMPR1B	ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293	bone morphogenetic protein receptor type 1B	protein-coding
74	chr12	62291475	62292073	+	0.2	NA	intron (NR_147080, intron 1 of 19)	L1PA15-16|LINE|L1	31370	NM_001351166	9958	Hs.434951	NM_006313	ENSG00000135655	USP15	UNPH-2|UNPH4	ubiquitin specific peptidase 15	protein-coding
43.4666	chr16	22966217	22966478	+	0.2	NA	Intergenic	Intergenic	152185	NM_006043	9956	Hs.115830	NM_006043	ENSG00000122254	HS3ST2	30ST2|3OST2	heparan sulfate-glucosamine 3-sulfotransferase 2	protein-coding
37.1-4	chr4	122615052	122615329	+	0.2	NA	intron (NM_001207006, intron 3 of 3)	intron (NM_001207006, intron 3 of 3)	-3793	NR_104126	100996941	Hs.439487	NR_104126	ENSG00000227145	IL21-AS1	-	IL21 antisense RNA 1	ncRNA
51.2	chr15	56675774	56676063	+	0.2	NA	intron (NM_001002843, intron 12 of 20)	intron (NM_001002843, intron 12 of 20)	58168	NM_001002844	54816	Hs.511477	NM_017661	ENSG00000137871	ZNF280D	SUHW4|ZNF634	zinc finger protein 280D	protein-coding
27.9-10	chrX	31366799	31367041	+	0.2	NA	intron (NM_000109, intron 60 of 78)	intron (NM_000109, intron 60 of 78)	-99966	NM_004019	1756	Hs.495912	NM_000109	ENSG00000198947	DMD	BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85	dystrophin	protein-coding
25.6667-7	chr3	54032248	54032395	+	0.2	NA	Intergenic	Intergenic	-90231	NM_018398	55799	Hs.656687	NM_018398	ENSG00000157445	CACNA2D3	HSA272268	calcium voltage-gated channel auxiliary subunit alpha2delta 3	protein-coding
48.1667	chr17	61228613	61229024	+	0.2	NA	intron (NM_001330413, intron 23 of 25)	Tigger1|DNA|TcMar-Tigger	138886	NR_136397	101927855	Hs.662123	NR_136397	ENSG00000267131	LOC101927855	-	uncharacterized LOC101927855	ncRNA
67.1	chr21	31851820	31852322	+	0.2	NA	Intergenic	AluSc|SINE|Alu	-20949	NM_014586	30811	Hs.109437	NM_014586	ENSG00000142149	HUNK	-	hormonally up-regulated Neu-associated kinase	protein-coding
26.3-10	chr9	20850646	20850866	+	0.2	NA	intron (NM_017794, intron 17 of 45)	intron (NM_017794, intron 17 of 45)	63829	NR_145762	109616992		NR_145762	ENSG00000202189	SNORA30B	-	small nucleolar RNA, H/ACA box 30B	snoRNA
32.8-9	chr5	74109821	74110066	+	0.2	NA	Intergenic	Intergenic	198382	NR_105009	102503429	Hs.519391	NR_105009	ENSG00000248942	LINC01335	-	long intergenic non-protein coding RNA 1335	ncRNA
49-3	chr10	68718164	68718568	+	0.2	NA	Intergenic	AluY|SINE|Alu	-2873	NR_104262	55749	Hs.49853	NM_018237	ENSG00000060339	CCAR1	-	cell division cycle and apoptosis regulator 1	protein-coding
29.1334-4	chr8	84712606	84712823	+	0.2	NA	intron (NM_001287244, intron 1 of 7)	intron (NM_001287244, intron 1 of 7)	6787	NM_001287244	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
52.5333	chr2	107743190	107743524	+	0.2	NA	Intergenic	Charlie1|DNA|hAT-Charlie	-10755	NR_126370	104326057	Hs.585967	NR_126369	ENSG00000232991	GACAT1	LINC00876	gastric cancer associated transcript 1	ncRNA
52.6666	chr12	5950479	5950914	+	0.2	NA	intron (NM_000552, intron 50 of 51)	intron (NM_000552, intron 50 of 51)	-4464	NM_001278597	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding
27.0667	chr1	213982234	213982503	+	0.2	NA	intron (NR_037850, intron 1 of 5)	intron (NR_037850, intron 1 of 5)	3785	NR_037850	100505832	Hs.664625	NR_037850		PROX1-AS1	-	PROX1 antisense RNA 1	ncRNA
22.8-15	chr6	23311251	23311430	+	0.2	NA	Intergenic	Intergenic	-593416	NR_134614	105374972	Hs.484889	NR_134613		LOC105374972	-	uncharacterized LOC105374972	ncRNA
38.7-2	chr11	86126088	86126528	+	0.2	NA	Intergenic	Intergenic	-56448	NM_001206947	8301	Hs.163893	NM_007166	ENSG00000073921	PICALM	CALM|CLTH|LAP	phosphatidylinositol binding clathrin assembly protein	protein-coding
24.3667-5	chr2	16278201	16278451	+	0.2	NA	Intergenic	MIR|SINE|MIR	227899	NR_126559	104797537	Hs.435748	NR_126559	ENSG00000236289	GACAT3	LINC01458|lncRNA-AC130710	gastric cancer associated transcript 3	ncRNA
17.9	chr1	66068371	66068466	+	0.2	NA	intron (NM_001037340, intron 1 of 14)	intron (NM_001037340, intron 1 of 14)	-17700	NR_123718	101927139	Hs.127908	NR_123718	ENSG00000227466	LOC101927139	-	uncharacterized LOC101927139	ncRNA
37	chr10	114643443	114643775	+	0.2	NA	intron (NM_001322886, intron 1 of 20)	AluJr|SINE|Alu	-11212	NM_001352440	3983	Hs.438236	NM_002313	ENSG00000099204	ABLIM1	ABLIM|LIMAB1|LIMATIN|abLIM-1	actin binding LIM protein 1	protein-coding
40.8-9	chr8	15705407	15705720	+	0.2	NA	intron (NM_001356429, intron 6 of 10)	intron (NM_001356429, intron 6 of 10)	165300	NM_006765	7991	Hs.426324	NM_006765	ENSG00000104723	TUSC3	D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2	tumor suppressor candidate 3	protein-coding
22.0667	chr10	36072364	36072510	+	0.2	NA	Intergenic	Intergenic	294135	NR_110138	102578074		NR_110138	ENSG00000280719	PCAT5	LINC01452|TPCAT-10-36067	prostate cancer associated transcript 5	ncRNA
53.5-3	chr7	16424211	16424686	+	0.2	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-2910	NR_160656	729920	Hs.636502	NM_001101417	ENSG00000214960	CRPPA	ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD	CDP-L-ribitol pyrophosphorylase A	protein-coding
31.1999-3	chr5	80918991	80919256	+	0.2	NA	Intergenic	Tigger16a|DNA|TcMar-Tigger	-41240	NM_006909	5924	Hs.162129	NM_006909	ENSG00000113319	RASGRF2	GRF2|RAS-GRF2	Ras protein specific guanine nucleotide releasing factor 2	protein-coding
18.4666	chr1	105155398	105155543	+	0.2	NA	Intergenic	L1MA8|LINE|L1	463465	NR_125954	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
36.1333-8	chr4	90257482	90257732	+	0.2	NA	intron (NM_207491, intron 1 of 7)	MLT2B1|LTR|ERVL	22576	NM_207491	401145	Hs.654735	NM_207491	ENSG00000184305	CCSER1	FAM190A	coiled-coil serine rich protein 1	protein-coding
68.3	chr10	117227183	117227719	+	0.2	NA	Intergenic	Intergenic	-13663	NM_003054	6571	Hs.596992	NM_003054	ENSG00000165646	SLC18A2	PKDYS2|SVAT|SVMT|VAT2|VMAT2	solute carrier family 18 member A2	protein-coding
86-2	chr2	52198715	52199253	+	0.2	NA	intron (NR_135237, intron 7 of 10)	L1ME2z|LINE|L1	-171664	NR_135239	105374596		NR_135239	ENSG00000225444	LINC01867	-	long intergenic non-protein coding RNA 1867	ncRNA
49.7334	chr15	91643990	91644666	+	0.2	NA	Intergenic	MLT1H1|LTR|ERVL-MaLR	180989	NR_110106	101926928	Hs.638788	NR_110106	ENSG00000258551	CRAT37	-	cervical cancer-associated transcript 37	ncRNA
30.4666-2	chr3	184075620	184075906	+	0.2	NA	Intergenic	Intergenic	-21301	NM_001256613	285242	Hs.449179	NM_182589	ENSG00000186038	HTR3E	5-HT3-E|5-HT3E|5-HT3c1	5-hydroxytryptamine receptor 3E	protein-coding
20.6333-6	chr18	4200861	4201032	+	0.2	NA	intron (NM_001242761, intron 1 of 11)	intron (NM_001242761, intron 1 of 11)	-63656	NR_036489	284215	Hs.647594	NR_036489	ENSG00000261520	DLGAP1-AS5	-	DLGAP1 antisense RNA 5	ncRNA
35-11	chr7	36415767	36416028	+	0.2	NA	intron (NM_001284302, intron 8 of 22)	L1M3|LINE|L1	-25540	NM_001100425	23366	Hs.6224	NM_015314	ENSG00000164542	KIAA0895	-	KIAA0895	protein-coding
29.7333-6	chr15	69224349	69224577	+	0.2	NA	intron (NM_001324092, intron 2 of 3)	L1MB3|LINE|L1	63828	NM_001324094	26035	Hs.183006	NM_015554	ENSG00000138604	GLCE	HSEPI	glucuronic acid epimerase	protein-coding
39.0333-3	chr21	19189624	19190109	+	0.2	NA	Intergenic	Intergenic	-430054	NR_109925	101927797	Hs.551743	NR_109925		MIR548XHG	-	MIR548X host gene	ncRNA
23.3333-13	chr7	20204738	20204986	+	0.2	NA	intron (NM_182762, intron 1 of 6)	intron (NM_182762, intron 1 of 6)	12522	NM_182762	346389	Hs.598388	NM_182762	ENSG00000183742	MACC1	7A5|SH3BP4L	MET transcriptional regulator MACC1	protein-coding
42.4-7	chr4	174933363	174933890	+	0.2	NA	intron (NM_001130703, intron 3 of 3)	L1PREC2|LINE|L1	15268	NM_001130703	11086	Hs.126838	NM_014269	ENSG00000168594	ADAM29	CT73|svph1	ADAM metallopeptidase domain 29	protein-coding
37.4667-5	chr3	73538351	73538674	+	0.2	NA	intron (NR_121660, intron 1 of 1)	intron (NR_121660, intron 1 of 1)	17190	NR_121660	101927296	Hs.662049	NR_121660		LOC101927296	-	uncharacterized LOC101927296	ncRNA
33.6-5	chr20	45957881	45958101	+	0.2	NA	intron (NM_022095, intron 15 of 27)	MIRb|SINE|MIR	14212	NM_022095	63925	Hs.174193	NM_022095	ENSG00000198026	ZNF335	MCPH10|NIF-1|NIF1|NIF2	zinc finger protein 335	protein-coding
62.9001	chr11	95217898	95218244	+	0.2	NA	intron (NM_001271594, intron 1 of 8)	intron (NM_001271594, intron 1 of 8)	-12115	NR_110295	100129203	Hs.191599	NR_110295		LOC100129203	-	uncharacterized LOC100129203	ncRNA
22.9667-8	chr3	134944354	134944577	+	0.2	NA	intron (NM_004441, intron 2 of 15)	MamGypLTR1b|LTR|Gypsy	149205	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding
53.1999	chr20	13726582	13727014	+	0.2	NA	intron (NM_001276380, intron 11 of 13)	intron (NM_001276380, intron 11 of 13)	58088	NM_016649	51575	Hs.369284	NM_016649	ENSG00000089048	ESF1	ABTAP|C20orf6|HDCMC28P|bA526K24.1	ESF1 nucleolar pre-rRNA processing protein homolog	protein-coding
29.5-8	chr8	130231531	130231818	+	0.2	NA	intron (NM_001362925, intron 4 of 29)	intron (NM_001362925, intron 4 of 29)	64859	NR_002765	29065	Hs.639318	NR_002765		ASAP1-IT1	ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050	ASAP1 intronic transcript 1	ncRNA
37.1334-2	chr2	161644802	161645250	+	0.2	NA	intron (NM_001354451, intron 1 of 25)	intron (NM_001354451, intron 1 of 25)	20610	NM_001354449	57282	Hs.333958	NM_022058	ENSG00000144290	SLC4A10	NBCn2|NCBE	solute carrier family 4 member 10	protein-coding
62.1999-2	chr3	109078131	109078542	+	0.2	NA	intron (NM_014429, intron 8 of 27)	L1MEi|LINE|L1	-23120	NR_144461	100506506	Hs.278908	NR_144461	ENSG00000239314	MORC1-AS1	-	MORC1 antisense RNA 1	ncRNA
36.7667-2	chr2	142856800	142857069	+	0.2	NA	Intergenic	Intergenic	-20730	NM_001199241	8942	Hs.470126	NM_003937	ENSG00000115919	KYNU	KYNUU|VCRL2	kynureninase	protein-coding
40.5333-2	chr10	47454421	47454770	+	0.2	NA	Intergenic	Intergenic	29520	NM_001040084	653145	Hs.535306	NM_001040084	ENSG00000265190	ANXA8	ANX8|CH17-360D5.2	annexin A8	protein-coding
34.7-5	chr12	122607740	122608139	+	0.2	NA	intron (NM_014708, intron 51 of 63)	intron (NM_014708, intron 51 of 63)	80690	NM_014708	9735	Hs.300559	NM_014708	ENSG00000184445	KNTC1	ROD	kinetochore associated 1	protein-coding
42.8666-5	chr3	42837832	42838148	+	0.2	NA	intron (NM_001296, intron 2 of 2)	LTR107_Mam|LTR|LTR	28545	NM_001296	1238	Hs.146346	NM_001296	ENSG00000144648	ACKR2	CCBP2|CCR10|CCR9|CMKBR9|D6|hD6	atypical chemokine receptor 2	protein-coding
37.9	chr16	2034104	2034313	+	0.2	NA	intron (NM_001252073, intron 1 of 5)	(TG)n|Simple_repeat|Simple_repeat	914	NM_001252073	9351	Hs.440896	NM_004785	ENSG00000065054	SLC9A3R2	E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1	SLC9A3 regulator 2	protein-coding
25.4666	chr1	241619521	241619718	+	0.2	NA	intron (NM_014322, intron 1 of 3)	intron (NM_014322, intron 1 of 3)	16311	NM_001821	1122	Hs.654545	NM_001821	ENSG00000203668	CHML	REP2	CHM like Rab escort protein	protein-coding
64.5333	chr8	121541642	121542133	+	0.2	NA	Intergenic	L1MC3|LINE|L1	-97459	NR_002835	594842	Hs.668686	NR_002835		HAS2-AS1	HAS2-AS|HAS2AS|HASNT|NCRNA00077	HAS2 antisense RNA 1	ncRNA
44-7	chr7	31384016	31384485	+	0.2	NA	Intergenic	Intergenic	-43524	NM_022728	63974	Hs.45152	NM_022728	ENSG00000164600	NEUROD6	Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2	neuronal differentiation 6	protein-coding
44.8-2	chr16	76117168	76117489	+	0.2	NA	Intergenic	L1MA7|LINE|L1	-160073	NM_001322189	85445	Hs.461389	NM_033401	ENSG00000152910	CNTNAP4	CASPR4	contactin associated protein like 4	protein-coding
60.3334-2	chr4	72576308	72576636	+	0.2	NA	Intergenic	Intergenic	-7251	NM_014243	9508	Hs.590919	NM_014243	ENSG00000156140	ADAMTS3	ADAMTS-4|HKLLS3	ADAM metallopeptidase with thrombospondin type 1 motif 3	protein-coding
46.5333-2	chr21	31463221	31463562	+	0.2	NA	intron (NM_001353691, intron 2 of 29)	L2|LINE|L2	95696	NM_001353688	7074	Hs.517228	NM_003253	ENSG00000156299	TIAM1	TIAM-1	T cell lymphoma invasion and metastasis 1	protein-coding
50.5	chr9	74946347	74946767	+	0.2	NA	TTS (NM_017998)	TTS (NM_017998)	6355	NM_017998	55071	Hs.532296	NM_017998	ENSG00000135045	C9orf40	-	chromosome 9 open reading frame 40	protein-coding
61.6	chr17	19737967	19738399	+	0.2	NA	3' UTR (NM_001135167, exon 11 of 11)	3' UTR (NM_001135167, exon 11 of 11)	7276	NM_001135168	218	Hs.531682	NM_000691	ENSG00000108602	ALDH3A1	ALDH3|ALDHIII	aldehyde dehydrogenase 3 family member A1	protein-coding
38.6-2	chr16	10264925	10265304	+	0.2	NA	Intergenic	L2a|LINE|L2	-82206	NM_000833	2903	Hs.411472	NM_000833	ENSG00000183454	GRIN2A	EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A	glutamate ionotropic receptor NMDA type subunit 2A	protein-coding
60.5667	chr11	24800652	24800993	+	0.2	NA	intron (NM_001252010, intron 5 of 9)	intron (NM_001252010, intron 5 of 9)	303769	NM_001252008	338645	Hs.144138	NM_001009909	ENSG00000187398	LUZP2	KFSP2566|PRO6246	leucine zipper protein 2	protein-coding
21.1334	chr2	228863821	228864088	+	0.2	NA	Intergenic	LTR81A|LTR|Gypsy	-252559	NR_151716	101928765	Hs.334040	NR_151716	ENSG00000232023	LINC01807	-	long intergenic non-protein coding RNA 1807	ncRNA
20.0666-5	chr6	83923432	83923575	+	0.2	NA	intron (NM_016230, intron 9 of 15)	intron (NM_016230, intron 9 of 15)	63814	NM_016230	51167	Hs.5741	NM_016230	ENSG00000065615	CYB5R4	NCB5OR|cb5/cb5R|dJ676J13.1	cytochrome b5 reductase 4	protein-coding
46.1333	chr11	63250162	63250478	+	0.2	NA	Intergenic	HERVL74-int|LTR|ERVL	-20668	NM_199352	387601	Hs.332119	NM_199352	ENSG00000196600	SLC22A25	HIMTP|UST6	solute carrier family 22 member 25	protein-coding
24.1333-4	chr15	66422180	66422330	+	0.2	NA	intron (NM_002755, intron 1 of 10)	intron (NM_002755, intron 1 of 10)	35382	NM_002755	5604	Hs.145442	NM_002755	ENSG00000169032	MAP2K1	CFC3|MAPKK1|MEK1|MKK1|PRKMK1	mitogen-activated protein kinase kinase 1	protein-coding
32.9-11	chr6	49078740	49079042	+	0.2	NA	Intergenic	L1M1|LINE|L1	384362	NM_000255	4594	Hs.485527	NM_000255	ENSG00000146085	MMUT	MCM|MUT	methylmalonyl-CoA mutase	protein-coding
19.7334	chr1	174315781	174315922	+	0.2	NA	intron (NM_001366445, intron 11 of 13)	L1MA1|LINE|L1	40751	NM_001366449	9910	Hs.585378	NM_014857	ENSG00000152061	RABGAP1L	HHL|TBC1D18	RAB GTPase activating protein 1 like	protein-coding
12.1667-3	chr19	3255143	3255203	+	0.2	NA	intron (NR_033342, intron 2 of 12)	intron (NR_033342, intron 2 of 12)	29895	NR_033342	60680	Hs.655747	NM_021938	ENSG00000161082	CELF5	BRUNOL-5|BRUNOL5|CELF-5	CUGBP Elav-like family member 5	protein-coding
44.2-5	chr9	94063293	94063647	+	0.2	NA	intron (NM_177995, intron 1 of 9)	intron (NM_177995, intron 1 of 9)	-20959	NM_152422	138639	Hs.437943	NM_152422	ENSG00000158079	PTPDC1	PTP9Q22	protein tyrosine phosphatase domain containing 1	protein-coding
33.4666-7	chr6	39722779	39722988	+	0.2	NA	intron (NM_001289020, intron 1 of 21)	intron (NM_001289020, intron 1 of 21)	2525	NM_001289020	221458	Hs.588202	NM_145027	ENSG00000164627	KIF6	C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1	kinesin family member 6	protein-coding
45.4	chr16	88675375	88675812	+	0.2	NA	TTS (NR_024402)	TTS (NR_024402)	10914	NM_178310	333929	Hs.673548	NM_178310	ENSG00000185669	SNAI3	SMUC|SNAIL3|ZNF293|Zfp293	snail family transcriptional repressor 3	protein-coding
13.2-11	chr22	32887950	32888061	+	0.2	NA	intron (NM_003490, intron 4 of 13)	L1ME2|LINE|L1	87189	NM_000362	7078	Hs.644633	NM_000362	ENSG00000100234	TIMP3	HSMRK222|K222|K222TA2|SFD	TIMP metallopeptidase inhibitor 3	protein-coding
32.5-10	chr7	20889608	20889862	+	0.2	NA	intron (NR_126381, intron 2 of 5)	intron (NR_126381, intron 2 of 5)	54304	NR_126381	104355138	Hs.650722	NR_126381	ENSG00000232790	LINC01162	-	long intergenic non-protein coding RNA 1162	ncRNA
44.3-5	chr9	137240264	137240497	+	0.2	NA	promoter-TSS (NM_006088)	promoter-TSS (NM_006088)	-907	NM_006088	10383	Hs.433615	NM_006088	ENSG00000188229	TUBB4B	Beta2|LCAEOD|TUBB2|TUBB2C	tubulin beta 4B class IVb	protein-coding
28.9-9	chr3	175954159	175954378	+	0.2	NA	Intergenic	Intergenic	-177935	NR_046714	100874245	Hs.614827	NR_046714		NAALADL2-AS1	-	NAALADL2 antisense RNA 1	ncRNA
9.99999-4	chr8	131599761	131599871	+	0.2	NA	Intergenic	Intergenic	-304277	NR_136615	23167	Hs.204564	NM_015137	ENSG00000132294	EFR3A	-	EFR3 homolog A	protein-coding
20.9333-8	chr18	64755142	64755332	+	0.2	NA	Intergenic	Intergenic	-495182	NR_033983	400654	Hs.434235	NR_033983	ENSG00000266952	LINC01538	-	long intergenic non-protein coding RNA 1538	ncRNA
30.8667-8	chr7	117592686	117592946	+	0.2	NA	intron (NM_000492, intron 14 of 26)	intron (NM_000492, intron 14 of 26)	-28140	NR_149084	111082987	Hs.583149	NR_149084	ENSG00000232661	CFTR-AS1	BGas	CFTR antisense RNA 1	ncRNA
71.1	chr8	134171388	134171954	+	0.2	NA	Intergenic	Intergenic	285175	NR_125424	101927822	Hs.129114	NR_125424	ENSG00000253593	LOC101927822	-	uncharacterized LOC101927822	ncRNA
28.3333-16	chr8	138627236	138627480	+	0.2	NA	intron (NM_152888, intron 50 of 64)	MER58A|DNA|hAT-Charlie	-129628	NM_001362965	51059	Hs.126024	NM_015912	ENSG00000147724	FAM135B	C8ORFK32	family with sequence similarity 135 member B	protein-coding
42.8333-3	chr2	45884871	45885326	+	0.2	NA	intron (NM_005400, intron 2 of 14)	intron (NM_005400, intron 2 of 14)	233423	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding
55.5	chr1	206957851	206958404	+	0.2	NA	3' UTR (NM_032029, exon 7 of 7)	3' UTR (NM_032029, exon 7 of 7)	-11661	NM_002644	5284	Hs.497589	NM_002644	ENSG00000162896	PIGR	-	polymeric immunoglobulin receptor	protein-coding
34.3-4	chr4	44450432	44450885	+	0.2	NA	Intergenic	Intergenic	-1849	NM_198353	386617	Hs.479644	NM_198353	ENSG00000183783	KCTD8	-	potassium channel tetramerization domain containing 8	protein-coding
30.8-6	chr2	237556427	237556694	+	0.2	NA	Intergenic	MLT2D|LTR|ERVL	-10014	NM_015893	51052	Hs.247710	NM_015893	ENSG00000071677	PRLH	PRH|PRRP	prolactin releasing hormone	protein-coding
40.3333-6	chr7	122889410	122889642	+	0.2	NA	Intergenic	Intergenic	-2767	NM_001009571	93664	Hs.649459	NM_017954	ENSG00000081803	CADPS2	CAPS2	calcium dependent secretion activator 2	protein-coding
25	chr1	119438127	119438300	+	0.2	NA	Intergenic	Intergenic	23063	NM_000198	3284	Hs.654399	NM_000198	ENSG00000203859	HSD3B2	HSD3B|HSDB|SDR11E2	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2	protein-coding
25-15	chr8	91231509	91231657	+	0.2	NA	intron (NM_001282357, intron 2 of 18)	(CTTTT)n|Simple_repeat|Simple_repeat	-17736	NM_134266	115111	Hs.354013	NM_052832	ENSG00000147606	SLC26A7	SUT2	solute carrier family 26 member 7	protein-coding
44.8	chr12	50351154	50351498	+	0.2	NA	exon (NM_001145475, exon 4 of 8)	exon (NM_001145475, exon 4 of 8)	45283	NM_001145475	121006	Hs.133187	NM_001145475	ENSG00000185958	FAM186A	-	family with sequence similarity 186 member A	protein-coding
34.1333-3	chr14	69348718	69349068	+	0.2	NA	intron (NM_020692, intron 14 of 15)	intron (NM_020692, intron 14 of 15)	49406	NM_004450	2079	Hs.509791	NM_004450	ENSG00000100632	ERH	DROER	ERH mRNA splicing and mitosis factor	protein-coding
33.9333-3	chr6	104972799	104972981	+	0.2	NA	intron (NM_001004317, intron 2 of 3)	AluSx1|SINE|Alu	15783	NM_001004317	389421	Hs.23616	NM_001004317	ENSG00000187772	LIN28B	CSDD2	lin-28 homolog B	protein-coding
33.8666-2	chr3	144476125	144476361	+	0.2	NA	Intergenic	Intergenic	503162	NM_001134470	205428	Hs.288954	NM_173552	ENSG00000181744	DIPK2A	C3orf58|DIA1|GoPro49|HASF	divergent protein kinase domain 2A	protein-coding
76.7	chr2	47988569	47989329	+	0.2	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	-83156	NM_001190274	80204	Hs.352677	NM_012167	ENSG00000138081	FBXO11	FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1	F-box protein 11	protein-coding
30.2667-3	chr3	57254348	57254536	+	0.2	NA	intron (NM_012096, intron 13 of 21)	intron (NM_012096, intron 13 of 21)	-15124	NR_135535	105377102	Hs.745243	NR_135535		LOC105377102	-	uncharacterized LOC105377102	ncRNA
36.5-6	chr17	65824290	65824565	+	0.2	NA	intron (NR_126542, intron 1 of 5)	L1MD3|LINE|L1	2024	NM_001037325	201134	Hs.408676	NM_145036	ENSG00000154240	CEP112	CCDC46|MACOCO	centrosomal protein 112	protein-coding
13.4667-4	chr2	101843361	101843478	+	0.2	NA	intron (NM_145686, intron 11 of 30)	intron (NM_145686, intron 11 of 30)	-140046	NR_103791	100506328	Hs.516245	NR_103791		LINC01127	-	long intergenic non-protein coding RNA 1127	ncRNA
44.6-5	chr4	155349916	155350183	+	0.2	NA	intron (NM_001039580, intron 13 of 13)	LTR83|LTR|ERVL	-4167	NR_125937	102724776	Hs.61271	NR_125937	ENSG00000250910	LOC102724776	-	uncharacterized LOC102724776	ncRNA
24.2667-9	chr5	19777891	19778090	+	0.2	NA	intron (NM_001349559, intron 3 of 12)	L1MEd|LINE|L1	108282	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
37.6-6	chr5	128712247	128712612	+	0.2	NA	Intergenic	Intergenic	-174184	NM_001999	2201	Hs.519294	NM_001999	ENSG00000138829	FBN2	CCA|DA9|EOMD	fibrillin 2	protein-coding
19.9-17	chrX	49628116	49628229	+	0.2	NA	Intergenic	Intergenic	29159	NM_001040663	2543	Hs.278606	NM_001468	ENSG00000205777	GAGE1	CT4.1|CT4.4|GAGE-1|GAGE-4|GAGE4	G antigen 1	protein-coding
50.2666	chr4	45392385	45392662	+	0.2	NA	Intergenic	Intergenic	-665889	NR_073095	132789	Hs.21398	NM_138335	ENSG00000163281	GNPDA2	GNP2|SB52	glucosamine-6-phosphate deaminase 2	protein-coding
55.2667-2	chr6	85412860	85413406	+	0.2	NA	Intergenic	L1MEf|LINE|L1	-8331	NR_134633	101928820	Hs.587370	NR_134633	ENSG00000234155	LINC02535	-	long intergenic non-protein coding RNA 2535	ncRNA
61.2334-2	chr1	227281571	227282367	+	0.2	NA	intron (NM_001366019, intron 1 of 36)	AluSp|SINE|Alu	36523	NM_014826	8476	Hs.35433	NM_003607	ENSG00000143776	CDC42BPA	MRCK|MRCKA|PK428	CDC42 binding protein kinase alpha	protein-coding
35.1-3	chr11	103735967	103736379	+	0.2	NA	Intergenic	Intergenic	-113733	NR_039842	100616457		NR_039842	ENSG00000264200	MIR4693	-	microRNA 4693	ncRNA
30.8-13	chr6	148500694	148500927	+	0.2	NA	intron (NM_001346506, intron 9 of 20)	(TTTG)n|Simple_repeat|Simple_repeat	-7689	NM_001346508	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	CAPOK|DUH1|SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding
40.5-4	chr13	66883137	66883465	+	0.2	NA	intron (NR_046527, intron 3 of 5)	intron (NR_046527, intron 3 of 5)	58132	NR_046527	100874064	Hs.569284	NR_046527	ENSG00000228842	PCDH9-AS2	-	PCDH9 antisense RNA 2	ncRNA
28.8-14	chr8	134418444	134418667	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	-179516	NR_002438	594840	Hs.626298	NR_002438	ENSG00000248492	ZFAT-AS1	NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS	ZFAT antisense RNA 1	ncRNA
64.3333	chr7	49170122	49170684	+	0.2	NA	Intergenic	Intergenic	245856	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
56.6001	chr2	178103522	178103952	+	0.2	NA	intron (NM_001077197, intron 2 of 20)	intron (NM_001077197, intron 2 of 20)	4602	NM_001077197	50940	Hs.570273	NM_016953	ENSG00000128655	PDE11A	PPNAD2	phosphodiesterase 11A	protein-coding
50.2	chr15	95066667	95067065	+	0.2	NA	Intergenic	Intergenic	211503	NR_077061	440311	Hs.745156	NR_077061	ENSG00000277654	LOC440311	-	NOP53 ribosome biogenesis factor pseudogene	pseudo
17.4-10	chr4	163190426	163190582	+	0.2	NA	Intergenic	HUERS-P3-int|LTR|ERV1	-23614	NM_001128931	92345	Hs.129095	NM_138386	ENSG00000145414	NAF1	-	nuclear assembly factor 1 ribonucleoprotein	protein-coding
50.7	chr14	92091795	92092189	+	0.2	NA	intron (NM_001164779, intron 1 of 6)	AluJo|SINE|Alu	14590	NR_028453	4287	Hs.532632	NM_004993	ENSG00000066427	ATXN3	AT3|ATX3|JOS|MJD|MJD1|SCA3	ataxin 3	protein-coding
43.8-4	chr5	6472477	6472832	+	0.2	NA	intron (NM_001145161, intron 1 of 1)	L1M5|LINE|L1	23795	NM_001145161	134111	Hs.126856	NM_001145161	ENSG00000215218	UBE2QL1	-	ubiquitin conjugating enzyme E2 Q family like 1	protein-coding
39.4667-2	chr2	103353406	103353735	+	0.2	NA	Intergenic	Intergenic	-369141	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
29.4-5	chr2	31409622	31409842	+	0.2	NA	intron (NM_000379, intron 1 of 35)	L1MB3|LINE|L1	5010	NM_000379	7498	Hs.250	NM_000379	ENSG00000158125	XDH	XAN1|XO|XOR	xanthine dehydrogenase	protein-coding
34.8-10	chr7	19561322	19561580	+	0.2	NA	Intergenic	Intergenic	143985	NR_036101	100422967		NR_036101	ENSG00000265932	MIR3146	mir-3146	microRNA 3146	ncRNA
65.4666	chr11	64140033	64140448	+	0.2	NA	intron (NM_014067, intron 3 of 10)	intron (NM_014067, intron 3 of 10)	25873	NM_014067	28992	Hs.602898	NM_014067	ENSG00000133315	MACROD1	LRP16	mono-ADP ribosylhydrolase 1	protein-coding
31.5-5	chr13	51037188	51037367	+	0.2	NA	intron (NR_003923, intron 3 of 16)	L1MC4|LINE|L1	28880	NR_003923	2974	Hs.411573	NM_004129	ENSG00000123201	GUCY1B2	GC-SB2	guanylate cyclase 1 soluble subunit beta 2 (pseudogene)	pseudo
41.8-4	chr9	28192908	28193288	+	0.2	NA	intron (NM_152570, intron 5 of 6)	intron (NM_152570, intron 5 of 6)	526207	NM_152570	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
25.8-24	chr8	121170635	121170817	+	0.2	NA	Intergenic	L2c|LINE|L2	-358680	NM_021021	6641	Hs.46701	NM_021021	ENSG00000172164	SNTB1	59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43	syntrophin beta 1	protein-coding
32.5667-6	chr4	57238805	57238967	+	0.2	NA	Intergenic	Intergenic	-128501	NM_001553	3490	Hs.479808	NM_001553	ENSG00000163453	IGFBP7	AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF	insulin like growth factor binding protein 7	protein-coding
54.7333-2	chr4	156580257	156580669	+	0.2	NA	Intergenic	Charlie7|DNA|hAT-Charlie	391336	NM_016205	56034	Hs.570855	NM_016205	ENSG00000145431	PDGFC	FALLOTEIN|SCDGF	platelet derived growth factor C	protein-coding
30.3334	chr4	61345849	61346098	+	0.2	NA	intron (NM_001371342, intron 1 of 20)	L3|LINE|CR1	143801	NM_001371342								
27.2667-12	chr2	193052355	193052511	+	0.2	NA	Intergenic	Intergenic	302588	NR_152587	64002	Hs.546994	NR_002769	ENSG00000227418	PCGEM1	LINC00071|NCRNA00071|PCAT9	PCGEM1 prostate-specific transcript	ncRNA
40.7333-2	chr10	21199898	21200241	+	0.2	NA	Intergenic	LTR16|LTR|ERVL	25767	NR_046284	100128511	Hs.635827	NR_046283	ENSG00000231920	NEBL-AS1	-	NEBL antisense RNA 1	ncRNA
29.5334	chr2	45375804	45376011	+	0.2	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-120966	NR_033831	400952	Hs.468368	NR_033831	ENSG00000205054	LINC01121	UNQ6975	long intergenic non-protein coding RNA 1121	ncRNA
30.8	chr1	171802987	171803339	+	0.2	NA	Intergenic	Intergenic	21503	NM_001007239	51603	Hs.494705	NM_014955	ENSG00000010165	EEF1AKNMT	5630401D24Rik|CGI-01|DFNB26|DFNB26M|KIAA0859|METTL13|feat	eEF1A lysine and N-terminal methyltransferase	protein-coding
27.6	chr10	114290181	114290487	+	0.2	NA	exon (NM_001320804, exon 13 of 14)	exon (NM_001320804, exon 13 of 14)	50720	NM_001320804	340706	Hs.197741	NM_198496	ENSG00000165816	VWA2	AMACO|CCSP-2|CCSP2|NET42	von Willebrand factor A domain containing 2	protein-coding
37.9334-3	chr19	35117339	35117652	+	0.2	NA	intron (NM_001136007, intron 3 of 10)	MIR|SINE|MIR	1667	NM_001136008	5349	Hs.301350	NM_005971	ENSG00000089356	FXYD3	MAT8|PLML	FXYD domain containing ion transport regulator 3	protein-coding
48.3333-4	chr16	8737021	8737376	+	0.2	NA	intron (NM_020686, intron 2 of 15)	AluSx1|SINE|Alu	16485	NM_001127448	18	Hs.336768	NM_000663	ENSG00000183044	ABAT	GABA-AT|GABAT|NPD009	4-aminobutyrate aminotransferase	protein-coding
36.0667-5	chr5	55051039	55051371	+	0.2	NA	Intergenic	Charlie8|DNA|hAT-Charlie	26949	NM_002104	3003	Hs.277937	NM_002104	ENSG00000113088	GZMK	TRYP2	granzyme K	protein-coding
40.0666-3	chr20	55378168	55378513	+	0.2	NA	Intergenic	Intergenic	-44703	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA
26.9333-15	chr4	42459462	42459622	+	0.2	NA	intron (NM_001105529, intron 26 of 35)	intron (NM_001105529, intron 26 of 35)	62054	NM_001080505	152573	Hs.370904	NM_001080505	ENSG00000178343	SHISA3	hShisa3	shisa family member 3	protein-coding
28.6-8	chr18	5439603	5439807	+	0.2	NA	intron (NM_001281535, intron 7 of 21)	intron (NM_001281535, intron 7 of 21)	100851	NM_001281533	23136	Hs.213394	NM_012307	ENSG00000082397	EPB41L3	4.1B|DAL-1|DAL1	erythrocyte membrane protein band 4.1 like 3	protein-coding
26.8-10	chr3	23646349	23646626	+	0.2	NA	Intergenic	Intergenic	-159468	NM_182666	7324	Hs.164853	NM_003341	ENSG00000170142	UBE2E1	UBCH6	ubiquitin conjugating enzyme E2 E1	protein-coding
30.1333-3	chr18	76147145	76147390	+	0.2	NA	Intergenic	Intergenic	24269	NR_040034	339298	Hs.151215	NR_040034	ENSG00000263547	LOC339298	-	uncharacterized LOC339298	ncRNA
35.3333-9	chr22	34432302	34432558	+	0.2	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-509542	NM_001362949	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding
73.6666	chr1	96012473	96013073	+	0.2	NA	intron (NR_125991, intron 4 of 4)	MER2|DNA|TcMar-Tigger	20705	NR_125991	102723661	Hs.143911	NR_125991	ENSG00000237435	LINC02790	-	long intergenic non-protein coding RNA 2790	ncRNA
55.4666-2	chr12	125983743	125984145	+	0.2	NA	promoter-TSS (NR_034132)	promoter-TSS (NR_034132)	-570	NR_034132	400084	Hs.156191	NR_034132	ENSG00000249267	LINC00939	-	long intergenic non-protein coding RNA 939	ncRNA
48.8	chr10	73444350	73444702	+	0.2	NA	3' UTR (NM_001289969, exon 13 of 13)	3' UTR (NM_001289969, exon 13 of 13)	-10965	NM_001024593	118490	Hs.631823	NM_001024593	ENSG00000166343	MSS51	ZMYND17	MSS51 mitochondrial translational activator	protein-coding
65.3668	chr3	180050213	180050830	+	0.2	NA	Intergenic	L2-3_Crp|LINE|L2	-13584	NM_001349401	51555	Hs.235331	NM_016559	ENSG00000114757	PEX5L	PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b	peroxisomal biogenesis factor 5 like	protein-coding
56.3334-2	chr9	79392153	79392730	+	0.2	NA	Intergenic	L1ME3Cz|LINE|L1	-179332	NM_001351562	7091	Hs.444213	NM_007005	ENSG00000106829	TLE4	BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4	TLE family member 4, transcriptional corepressor	protein-coding
23.1-12	chr3	87216459	87216659	+	0.2	NA	Intergenic	Plat_L3|LINE|CR1	9718	NR_039958	100616161		NR_039958	ENSG00000264119	MIR4795	-	microRNA 4795	ncRNA
69.6	chr5	51193754	51194213	+	0.2	NA	Intergenic	AluSp|SINE|Alu	189349	NR_046243	642366	Hs.544139	NR_046243		LOC642366	-	uncharacterized LOC642366	ncRNA
41.6333-2	chr18	14913140	14913623	+	0.2	NA	Intergenic	Intergenic	-32886	NR_104164	400644	Hs.514732	NR_104164	ENSG00000266554	LINC01443	-	long intergenic non-protein coding RNA 1443	ncRNA
25.8666-3	chr14	50005058	50005285	+	0.2	NA	non-coding (NR_126496, exon 1 of 5)	non-coding (NR_126496, exon 1 of 5)	1348	NR_126496	283551	Hs.292580	NM_001012706	ENSG00000214900	LINC01588	C14orf182	long intergenic non-protein coding RNA 1588	ncRNA
37.4-2	chr12	129663174	129663440	+	0.2	NA	intron (NM_133448, intron 2 of 8)	AluSp|SINE|Alu	240718	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding
39-8	chr3	161360178	161360493	+	0.2	NA	intron (NM_001040100, intron 1 of 2)	intron (NM_001040100, intron 1 of 2)	11748	NM_001040100	165679	Hs.369104	NM_145035	ENSG00000196542	SPTSSB	ADMP|C3orf57|SSSPTB	serine palmitoyltransferase small subunit B	protein-coding
36.7667-3	chr20	34827943	34828197	+	0.2	NA	Intergenic	AluJb|SINE|Alu	-2419	NM_014071	23054	Hs.368971	NM_014071	ENSG00000198646	NCOA6	AIB3|ASC2|NRC|PRIP|RAP250|TRBP	nuclear receptor coactivator 6	protein-coding
34.8-5	chr18	1103266	1103520	+	0.2	NA	Intergenic	Intergenic	-175400	NR_146724	388456	Hs.407666	NR_146724	ENSG00000259837	LINC01904	-	long intergenic non-protein coding RNA 1904	ncRNA
32.3333-9	chr7	11851948	11852235	+	0.2	NA	Intergenic	L1ME3G|LINE|L1	-19893	NM_015204	221981	Hs.120855	NM_015204	ENSG00000005108	THSD7A	-	thrombospondin type 1 domain containing 7A	protein-coding
24.4-12	chr2	41319925	41320366	+	0.2	NA	Intergenic	Intergenic	-557410	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA
36.2667-2	chr12	25151566	25152035	+	0.2	NA	intron (NR_147909, intron 5 of 14)	intron (NR_147909, intron 5 of 14)	43360	NM_001319978	55259	Hs.407771	NM_018272	ENSG00000118307	CASC1	LAS1|PPP1R54	cancer susceptibility 1	protein-coding
20.3333-8	chr12	104012649	104012805	+	0.2	NA	intron (NM_031302, intron 5 of 11)	MLT1B|LTR|ERVL-MaLR	46855	NM_003211	6996	Hs.584809	NM_003211	ENSG00000139372	TDG	hTDG	thymine DNA glycosylase	protein-coding
37.4333-8	chr18	45777150	45777572	+	0.2	NA	Intergenic	Intergenic	-48314	NM_213602	284266	Hs.287692	NM_213602	ENSG00000197046	SIGLEC15	CD33L3|HsT1361|SIGLEC-15	sialic acid binding Ig like lectin 15	protein-coding
29.8-9	chr7	26891010	26891493	+	0.2	NA	Intergenic	Intergenic	-26661	NM_003930	8935	Hs.200770	NM_003930	ENSG00000005020	SKAP2	PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R	src kinase associated phosphoprotein 2	protein-coding
23.8-12	chr6	43681213	43681449	+	0.2	NA	intron (NM_001193343, intron 1 of 4)	intron (NM_001193343, intron 1 of 4)	6481	NM_001193343	55168	Hs.520149	NM_018135	ENSG00000096080	MRPS18A	HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a	mitochondrial ribosomal protein S18A	protein-coding
64.5999	chr2	122278702	122279161	+	0.2	NA	Intergenic	Intergenic	523280	NM_004622	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding
44.2334	chr14	73661943	73662503	+	0.2	NA	intron (NM_001201366, intron 5 of 8)	intron (NM_001201366, intron 5 of 8)	17237	NM_001201366	83544	Hs.271270	NM_031427	ENSG00000119661	DNAL1	C14orf168|CILD16|LC1	dynein axonemal light chain 1	protein-coding
34.3	chr14	51723837	51724225	+	0.2	NA	intron (NM_001042481, intron 13 of 14)	intron (NM_001042481, intron 13 of 14)	6748	NM_001267047	122786	Hs.434914	NM_152330	ENSG00000139926	FRMD6	C14orf31|EX1|Willin|c14_5320	FERM domain containing 6	protein-coding
52.7-2	chr20	19560375	19560692	+	0.2	NA	intron (NM_020689, intron 3 of 16)	intron (NM_020689, intron 3 of 16)	-275937	NR_024564	100130264	Hs.683814	NR_024564	ENSG00000179447	LOC100130264	-	uncharacterized LOC100130264	ncRNA
53.2666	chr2	220965277	220965691	+	0.2	NA	Intergenic	A-rich|Low_complexity|Low_complexity	606820	NM_001304537	2043	Hs.371218	NM_004438	ENSG00000116106	EPHA4	EK8|HEK8|SEK|TYRO1	EPH receptor A4	protein-coding
48.7667	chr5	83877740	83878207	+	0.2	NA	Intergenic	Intergenic	-157118	NM_001884	1404	Hs.2799	NM_001884	ENSG00000145681	HAPLN1	CRT1|CRTL1	hyaluronan and proteoglycan link protein 1	protein-coding
26.3-6	chr5	10469953	10470166	+	0.2	NA	Intergenic	ORSL-2b|DNA|hAT-Tip100	-7978	NR_106747	102465138		NR_106747	ENSG00000277073	MIR6131	hsa-mir-6131	microRNA 6131	ncRNA
75.1999	chr1	168878726	168879263	+	0.2	NA	Intergenic	L2a|LINE|L2	92053	NR_024160	79100	Hs.250624	NR_024160	ENSG00000225826	LINC00626	-	long intergenic non-protein coding RNA 626	ncRNA
39.3333-9	chr9	73753521	73753832	+	0.2	NA	Intergenic	L1MA5|LINE|L1	601811	NM_000700	301	Hs.494173	NM_000700	ENSG00000135046	ANXA1	ANX1|LPC1	annexin A1	protein-coding
29.1-11	chr7	106918505	106918752	+	0.2	NA	Intergenic	Intergenic	53149	NM_002649	5294	Hs.32942	NM_002649	ENSG00000105851	PIK3CG	PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma	protein-coding
38.9333-3	chr13	50682358	50682762	+	0.2	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	-125295	NR_046551	100874074	Hs.734030	NR_046551	ENSG00000176124	DLEU7-AS1	-	DLEU7 antisense RNA 1	ncRNA
62.3333	chr2	161913139	161913588	+	0.2	NA	intron (NM_001354443, intron 15 of 25)	intron (NM_001354443, intron 15 of 25)	160852	NM_001935	1803	Hs.368912	NM_001935	ENSG00000197635	DPP4	ADABP|ADCP2|CD26|DPPIV|TP103	dipeptidyl peptidase 4	protein-coding
53.6001	chr1	239048798	239049282	+	0.2	NA	Intergenic	MER67B|LTR|ERV1	-337528	NM_001347716	1131	Hs.7138	NM_000740	ENSG00000133019	CHRM3	EGBRS|HM3|PBS	cholinergic receptor muscarinic 3	protein-coding
62.7667	chr7	4561000	4561332	+	0.2	NA	Intergenic	AluJr|SINE|Alu	-121129	NM_001037165	221937	Hs.487393	NM_001037165	ENSG00000164916	FOXK1	FOXK1L	forkhead box K1	protein-coding
54.4-2	chr21	42745498	42745828	+	0.2	NA	intron (NM_001001574, intron 6 of 17)	intron (NM_001001574, intron 6 of 17)	34331	NR_135517	101928311	Hs.570404	NR_135517	ENSG00000283051	LINC01668	-	long intergenic non-protein coding RNA 1668	ncRNA
27-8	chr13	31160294	31160633	+	0.2	NA	intron (NM_001286505, intron 1 of 15)	intron (NM_001286505, intron 1 of 15)	1441	NM_001349704	10808	Hs.743267	NM_006644	ENSG00000120694	HSPH1	HSP105|HSP105A|HSP105B|NY-CO-25	heat shock protein family H (Hsp110) member 1	protein-coding
44.6666-2	chr20	45424462	45424758	+	0.2	NA	promoter-TSS (NR_106870)	promoter-TSS (NR_106870)	-900	NR_106870	102465487		NR_106870	ENSG00000273555	MIR6812	hsa-mir-6812	microRNA 6812	ncRNA
66.4667	chr1	65091962	65092440	+	0.2	NA	Intergenic	Intergenic	-24455	NM_001321854	3716	Hs.207538	NM_002227	ENSG00000162434	JAK1	JAK1A|JAK1B|JTK3	Janus kinase 1	protein-coding
63.0334	chr14	45865341	45866212	+	0.2	NA	Intergenic	L2a|LINE|L2	-150174	NR_146547	105370479		NR_146546	ENSG00000258616	LINC02303	-	long intergenic non-protein coding RNA 2303	ncRNA
32.2666-3	chr17	79260789	79261021	+	0.2	NA	intron (NM_001082575, intron 3 of 14)	L2a|LINE|L2	185968	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding
24.3667-12	chr7	126660406	126660593	+	0.2	NA	intron (NM_001371085, intron 7 of 10)	intron (NM_001371085, intron 7 of 10)	397685	NR_030323	693177		NR_030323	ENSG00000207692	MIR592	MIRN592|hsa-mir-592|mir-592	microRNA 592	ncRNA
27.4-20	chr8	103824228	103824540	+	0.2	NA	intron (NR_145711, intron 1 of 21)	intron (NR_145711, intron 1 of 21)	5164	NM_001348508	9699	Hs.655271	NM_014677	ENSG00000176406	RIMS2	OBOE|RAB3IP3|RIM2	regulating synaptic membrane exocytosis 2	protein-coding
40.8334	chr6	149827411	149827635	+	0.2	NA	intron (NM_032832, intron 5 of 6)	intron (NM_032832, intron 5 of 6)	-35975	NR_045126	100652739	Hs.642734	NR_045126	ENSG00000223701	RAET1E-AS1	RAET1G-AS1	RAET1E antisense RNA 1	ncRNA
66.7332	chr14	84469194	84469682	+	0.2	NA	Intergenic	Intergenic	-802494	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
25.4	chr1	108892593	108892797	+	0.2	NA	intron (NM_013296, intron 2 of 14)	intron (NM_013296, intron 2 of 14)	15710	NM_001321039	29899	Hs.584901	NM_013296	ENSG00000121957	GPSM2	CMCS|DFNB82|LGN|PINS	G protein signaling modulator 2	protein-coding
37.9-4	chr3	48024405	48024666	+	0.2	NA	intron (NM_002375, intron 1 of 18)	intron (NM_002375, intron 1 of 18)	64313	NM_030885	4134	Hs.517949	NM_002375	ENSG00000047849	MAP4	-	microtubule associated protein 4	protein-coding
30.4333-3	chr20	13514523	13515018	+	0.2	NA	intron (NR_136631, intron 10 of 13)	intron (NR_136631, intron 10 of 13)	124162	NM_017714	55617	Hs.348297	NM_017714	ENSG00000089123	TASP1	C20orf13|dJ585I14.2	taspase 1	protein-coding
53-2	chr9	28247938	28248472	+	0.2	NA	intron (NM_152570, intron 5 of 6)	L1MA2|LINE|L1	471100	NM_152570	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
21.3-22	chrX	152100125	152100231	+	0.2	NA	Intergenic	L1MD2|LINE|L1	17761	NM_021049	4104	Hs.18048	NM_021049		MAGEA5	CT1.5|MAGE5|MAGEA4	MAGE family member A5	protein-coding
90.9001	chr4	78460504	78461220	+	0.2	NA	intron (NM_025074, intron 47 of 73)	Tigger3a|DNA|TcMar-Tigger	-90908	NM_005139	306	Hs.480042	NM_005139	ENSG00000138772	ANXA3	ANX3	annexin A3	protein-coding
46.6667	chr10	55340283	55340782	+	0.2	NA	intron (NM_001354404, intron 2 of 34)	intron (NM_001354404, intron 2 of 34)	-258510	NM_001190478	100463289		NM_001190478	ENSG00000249860	MTRNR2L5	HN5	MT-RNR2 like 5	protein-coding
63.8666	chr16	2889295	2889692	+	0.2	NA	intron (NM_138439, intron 1 of 3)	AluY|SINE|Alu	6278	NM_138439	114984	Hs.534525	NM_138439	ENSG00000162076	FLYWCH2	-	FLYWCH family member 2	protein-coding
29.6-12	chr5	32871834	32872021	+	0.2	NA	Intergenic	Intergenic	-75516	NR_033832	340113	Hs.434404	NR_033832	ENSG00000248279	LINC02120	-	long intergenic non-protein coding RNA 2120	ncRNA
28.4-13	chr5	66972111	66972502	+	0.2	NA	intron (NM_001290226, intron 1 of 26)	intron (NM_001290226, intron 1 of 26)	13233	NM_001290226	375449	Hs.595458	NM_015183	ENSG00000069020	MAST4	-	microtubule associated serine/threonine kinase family member 4	protein-coding
42.2-2	chr13	76174599	76175134	+	0.2	NA	Intergenic	THE1C-int|LTR|ERVL-MaLR	-239734	NR_047491	100861545	Hs.638962	NR_047491	ENSG00000261206	LINC00561	-	long intergenic non-protein coding RNA 561	ncRNA
40.4001-3	chr4	65425915	65426182	+	0.2	NA	intron (NM_001281767, intron 5 of 16)	L2a|LINE|L2	243440	NM_001318761	2044	Hs.654492	NM_004439	ENSG00000145242	EPHA5	CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4	EPH receptor A5	protein-coding
33.9-3	chr20	60181361	60181678	+	0.2	NA	intron (NR_046099, intron 3 of 4)	intron (NR_046099, intron 3 of 4)	43027	NR_046099	284757	Hs.542528	NM_001004305	ENSG00000228340	MIR646HG	-	MIR646 host gene	ncRNA
46.6333-2	chr14	55067736	55068035	+	0.2	NA	3' UTR (NM_144578, exon 4 of 4)	3' UTR (NM_144578, exon 4 of 4)	16238	NM_144578	93487	Hs.594338	NM_144578	ENSG00000168175	MAPK1IP1L	C14orf32|MISS|c14_5346	mitogen-activated protein kinase 1 interacting protein 1 like	protein-coding
41.3334	chr1	43051917	43052162	+	0.2	NA	Intergenic	Intergenic	92990	NR_033967	440584	Hs.260928	NR_033967	ENSG00000227533	SLC2A1-AS1	-	SLC2A1 antisense RNA 1	ncRNA
59.2334	chr8	127347044	127347530	+	0.2	NA	intron (NR_117099, intron 3 of 3)	L1MA7|LINE|L1	-53112	NR_109834	101805488	Hs.745578	NR_109834	ENSG00000280997	CCAT2	LINC00873|NCCP1	colon cancer associated transcript 2	ncRNA
60.8666	chr1	195968585	195968970	+	0.2	NA	Intergenic	AluSz6|SINE|Alu	119938	NR_146895	105371673		NR_146895		LINC01724	-	long intergenic non-protein coding RNA 1724	ncRNA
46.4-5	chr5	117766236	117766590	+	0.2	NA	intron (NR_104997, intron 1 of 2)	LTR78B|LTR|ERV1	36052	NR_104997	102467224	Hs.134230	NR_104997		LINC02147	-	long intergenic non-protein coding RNA 2147	ncRNA
37.4333-5	chr12	118781136	118781393	+	0.2	NA	Intergenic	Intergenic	-19585	NR_134998	105370014	Hs.550870	NR_134998	ENSG00000256750	LINC02423	-	long intergenic non-protein coding RNA 2423	ncRNA
55.6-3	chr20	53622244	53622784	+	0.2	NA	intron (NR_134576, intron 2 of 2)	MIRc|SINE|MIR	14160	NR_134576	105372672	Hs.259350	NR_134576	ENSG00000235415	LOC105372672	-	uncharacterized LOC105372672	ncRNA
36.3333	chr12	74237323	74237722	+	0.2	NA	intron (NR_038300, intron 3 of 6)	Tigger2|DNA|TcMar-Tigger	55109	NR_038300	100507377	Hs.455715	NR_038300	ENSG00000251138	LOC100507377	-	uncharacterized LOC100507377	ncRNA
47.6-3	chr2	26063548	26063845	+	0.2	NA	intron (NM_016131, intron 1 of 5)	L1MC4|LINE|L1	29612	NM_016131	10890	Hs.467960	NM_016131	ENSG00000084733	RAB10	-	RAB10, member RAS oncogene family	protein-coding
21.8666	chr11	72888488	72888722	+	0.2	NA	intron (NM_014824, intron 11 of 19)	intron (NM_014824, intron 11 of 19)	74194	NM_033388	89849	Hs.653186	NM_033388	ENSG00000168010	ATG16L2	ATG16B|WDR80	autophagy related 16 like 2	protein-coding
69.6666	chr12	4332745	4333410	+	0.2	NA	intron (NM_020375, intron 2 of 5)	L1MC4a|LINE|L1	11864	NM_020375	57103	Hs.504545	NM_020375	ENSG00000078237	TIGAR	C12orf5|FR2BP	TP53 induced glycolysis regulatory phosphatase	protein-coding
51.5333	chr16	25510860	25511193	+	0.2	NA	Intergenic	MLT1H1-int|LTR|ERVL-MaLR	-180933	NM_006040	9951	Hs.655275	NM_006040	ENSG00000182601	HS3ST4	3-OST-4|30ST4|3OST4|h3-OST-4	heparan sulfate-glucosamine 3-sulfotransferase 4	protein-coding
45-5	chr22	21592365	21592887	+	0.2	NA	intron (NR_046082, intron 1 of 3)	intron (NR_046082, intron 1 of 3)	24912	NM_003347	7332	Hs.108104	NM_003347	ENSG00000185651	UBE2L3	E2-F1|L-UBC|UBCH7|UbcM4	ubiquitin conjugating enzyme E2 L3	protein-coding
45.4667-3	chr20	31387480	31387764	+	0.2	NA	intron (NR_073153, intron 1 of 2)	MER115|DNA|hAT-Tip100	2968	NR_126440	245932	Hs.516998	NM_153289	ENSG00000180483	DEFB119	DEFB-19|DEFB-20|DEFB120|DEFB20|ESC42-RELA|ESC42-RELB	defensin beta 119	protein-coding
36.3667	chr14	63225392	63225592	+	0.2	NA	intron (NM_020663, intron 1 of 4)	intron (NM_020663, intron 1 of 4)	21049	NM_020663	57381	Hs.656339	NM_020663	ENSG00000126785	RHOJ	ARHJ|RASL7B|TC10B|TCL	ras homolog family member J	protein-coding
51.3667	chr8	87469992	87470351	+	0.2	NA	Intergenic	Intergenic	403844	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
24.4333-3	chr11	113859505	113859732	+	0.2	NA	intron (NM_020886, intron 1 of 24)	(TA)n|Simple_repeat|Simple_repeat	15954	NM_001346257	57646	Hs.503891	NM_020886	ENSG00000048028	USP28	-	ubiquitin specific peptidase 28	protein-coding
35.6-12	chr5	78380130	78380372	+	0.2	NA	intron (NM_001290229, intron 1 of 7)	L1MC5a|LINE|L1	19634	NM_001290229	9522	Hs.482587	NM_004866	ENSG00000085365	SCAMP1	SCAMP|SCAMP37	secretory carrier membrane protein 1	protein-coding
24-19	chr8	115276936	115277099	+	0.2	NA	Intergenic	L1MB1|LINE|L1	390996	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
57.1-2	chr22	45552521	45552893	+	0.2	NA	intron (NM_006486, intron 14 of 16)	intron (NM_006486, intron 14 of 16)	49824	NM_006486	2192	Hs.24601	NM_001996	ENSG00000077942	FBLN1	FBLN|FIBL1	fibulin 1	protein-coding
16.5-5	chr2	170085206	170085328	+	0.2	NA	Intergenic	Intergenic	-92880	NM_001083615	140469	Hs.671900	NM_138995	ENSG00000071909	MYO3B	-	myosin IIIB	protein-coding
17.7-10	chr22	25165224	25165378	+	0.2	NA	intron (NM_001145206, intron 4 of 10)	intron (NM_001145206, intron 4 of 10)	-34557	NM_004076	1417	Hs.533022	NM_004076	ENSG00000100053	CRYBB3	CATCN2|CRYB3|CTRCT22	crystallin beta B3	protein-coding
44.4-2	chr1	156799865	156800281	+	0.2	NA	intron (NM_005973, intron 6 of 6)	intron (NM_005973, intron 6 of 6)	-15677	NM_001007792	4914	Hs.406293	NM_002529	ENSG00000198400	NTRK1	MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA	neurotrophic receptor tyrosine kinase 1	protein-coding
34.9667	chr10	31559849	31560103	+	0.2	NA	Intergenic	L1MA7|LINE|L1	-160221	NM_001368169	100505502	Hs.730227	NM_001368169		LOC100505502	-	putative UPF0607 protein FLJ37424	protein-coding
33.3667-4	chr7	92954844	92955208	+	0.2	NA	Intergenic	Intergenic	-118399	NM_001145306	1021	Hs.119882	NM_001259	ENSG00000105810	CDK6	MCPH12|PLSTIRE	cyclin dependent kinase 6	protein-coding
26.8-7	chr19	51755027	51755255	+	0.2	NA	Intergenic	Intergenic	-3244	NM_002029	2357	Hs.753	NM_002029	ENSG00000171051	FPR1	FMLP|FPR	formyl peptide receptor 1	protein-coding
19.6-4	chr14	60712980	60713156	+	0.2	NA	3' UTR (NM_017420, exon 3 of 3)	3' UTR (NM_017420, exon 3 of 3)	11283	NM_017420	51804	Hs.97849	NM_017420	ENSG00000100625	SIX4	AREC3	SIX homeobox 4	protein-coding
36.1333	chr11	75870507	75870844	+	0.2	NA	intron (NM_003369, intron 3 of 14)	intron (NM_003369, intron 3 of 14)	55465	NM_003369	7405	Hs.202470	NM_003369	ENSG00000198382	UVRAG	DHTX|VPS38|p63	UV radiation resistance associated	protein-coding
31.6666-5	chr2	237815396	237815667	+	0.2	NA	intron (NM_001080504, intron 2 of 15)	MER112|DNA|hAT-Charlie	16786	NM_001080504	375316	Hs.607265	NM_198852	ENSG00000177483	RBM44	-	RNA binding motif protein 44	protein-coding
30.3333-4	chr16	66992037	66992188	+	0.2	NA	intron (NM_001364782, intron 1 of 13)	intron (NM_001364782, intron 1 of 13)	3523	NM_001364782	283848	Hs.346947	NM_173815	ENSG00000172824	CES4A	CES6|CES8	carboxylesterase 4A	protein-coding
47.2666-3	chr6	138605722	138606079	+	0.2	NA	Intergenic	MIRc|SINE|MIR	-33331	NM_020464	57224	Hs.652741	NM_020464	ENSG00000135540	NHSL1	C6orf63	NHS like 1	protein-coding
28.7333-4	chr10	79409251	79409397	+	0.2	NA	intron (NM_153367, intron 2 of 3)	intron (NM_153367, intron 2 of 3)	36300	NM_153367	219654	Hs.523080	NM_153367	ENSG00000165424	ZCCHC24	C10orf56|Z3CXXC8	zinc finger CCHC-type containing 24	protein-coding
28.7333-11	chr3	99838390	99838633	+	0.2	NA	intron (NM_001282794, intron 2 of 2)	intron (NM_001282794, intron 2 of 2)	-14646	NR_110821	101929357	Hs.741615	NR_110821		HP09053	-	uncharacterized LOC101929357	ncRNA
40.6334	chr1	115299675	115300116	+	0.2	NA	intron (NM_002506, intron 1 of 2)	intron (NM_002506, intron 1 of 2)	16861	NR_157569	112840934		NR_157569		NGF-AS1	-	NGF antisense RNA 1	ncRNA
56.1334-3	chr2	9024177	9024524	+	0.2	NA	Intergenic	L1PA17|LINE|L1	-20666	NR_135600	129642	Hs.467634	NM_138799	ENSG00000143797	MBOAT2	LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2	membrane bound O-acyltransferase domain containing 2	protein-coding
60.1999-2	chr13	88105391	88105847	+	0.2	NA	Intergenic	Intergenic	-37248	NR_131919	105370306	Hs.560133	NR_131919	ENSG00000231019	LINC00373	-	long intergenic non-protein coding RNA 373	ncRNA
15.3333	chr11	113417418	113417555	+	0.2	NA	intron (NM_016574, intron 3 of 6)	MIR|SINE|MIR	29707	NM_178510	255239	Hs.448473	NM_178510	ENSG00000170209	ANKK1	PKK2|sgK288	ankyrin repeat and kinase domain containing 1	protein-coding
51.3333-4	chr6	120649673	120649989	+	0.2	NA	Intergenic	L1PA16|LINE|L1	634652	NR_036098	100422951		NR_036098	ENSG00000265725	MIR3144	mir-3144	microRNA 3144	ncRNA
56.9667	chr4	98616624	98617434	+	0.2	NA	intron (NM_005723, intron 1 of 7)	AluJb|SINE|Alu	41582	NM_005723	10098	Hs.118118	NM_005723	ENSG00000168785	TSPAN5	NET-4|NET4|TM4SF9|TSPAN-5	tetraspanin 5	protein-coding
52-6	chr4	79103810	79104209	+	0.2	NA	intron (NR_038342, intron 3 of 5)	L1PA15|LINE|L1	132261	NR_038342	100505875	Hs.480055	NR_038342		LINC01088	-	long intergenic non-protein coding RNA 1088	ncRNA
27.9-2	chr2	44553627	44554118	+	0.2	NA	intron (NM_024766, intron 3 of 10)	intron (NM_024766, intron 3 of 10)	191925	NM_024766	79823	Hs.468349	NM_024766	ENSG00000143919	CAMKMT	C2orf34|CLNMT|CaM KMT|Cam|KMT	calmodulin-lysine N-methyltransferase	protein-coding
30.6667-6	chr20	46229613	46229951	+	0.2	NA	intron (NM_021248, intron 3 of 11)	intron (NM_021248, intron 3 of 11)	78716	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding
30.4-11	chr8	84461459	84461945	+	0.2	NA	intron (NM_001354308, intron 2 of 9)	intron (NM_001354308, intron 2 of 9)	46218	NM_001354308	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
33.9-2	chr11	72676537	72676745	+	0.2	NA	Intergenic	MIRb|SINE|MIR	-2219	NM_002599	5138	Hs.503163	NM_002599	ENSG00000186642	PDE2A	CGS-PDE|PDE2A1|PED2A4|cGSPDE	phosphodiesterase 2A	protein-coding
58.6667	chr11	74657890	74658237	+	0.2	NA	Intergenic	THE1A|LTR|ERVL-MaLR	53304	NM_001304417	25884	Hs.432379	NM_015424	ENSG00000054938	CHRDL2	BNF1|CHL2	chordin like 2	protein-coding
48.5333-7	chr9	33202609	33202868	+	0.2	NA	Intergenic	Intergenic	34879	NR_108108	101929639	Hs.545818	NR_108108	ENSG00000233554	B4GALT1-AS1	-	B4GALT1 antisense RNA 1	ncRNA
40.2	chr13	29596489	29596778	+	0.2	NA	promoter-TSS (NM_003045)	promoter-TSS (NM_003045)	-945	NM_003045	6541	Hs.14846	NM_003045	ENSG00000139514	SLC7A1	ATRC1|CAT-1|ERR|HCAT1|REC1L	solute carrier family 7 member 1	protein-coding
23.6-25	chr9	103637125	103637532	+	0.2	NA	Intergenic	Intergenic	-312295	NR_121578	101928496	Hs.410860	NR_121578	ENSG00000225564	LINC01492	-	long intergenic non-protein coding RNA 1492	ncRNA
28.2334-2	chr6	53473763	53473993	+	0.2	NA	Intergenic	L1MA3|LINE|L1	71223	NM_001197115	2729	Hs.654465	NM_001498	ENSG00000001084	GCLC	GCL|GCS|GLCL|GLCLC	glutamate-cysteine ligase catalytic subunit	protein-coding
30.2-15	chr7	38757039	38757264	+	0.2	NA	intron (NM_014396, intron 18 of 28)	intron (NM_014396, intron 18 of 28)	-70062	NR_028347	340286	Hs.144075	NM_001105282	ENSG00000164556	FAM183BP	FAM183B|THEG6	acyloxyacyl hydrolase (neutrophil)	pseudo
19.2-15	chr8	133612021	133612145	+	0.2	NA	Intergenic	Intergenic	-40196	NM_173344	6482	Hs.374257	NM_003033	ENSG00000008513	ST3GAL1	Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	protein-coding
36.8667	chr1	67423264	67423484	+	0.2	NA	intron (NM_001018068, intron 5 of 7)	AluSx1|SINE|Alu	7028	NM_001018067	26135	Hs.530412	NM_015640	ENSG00000142864	SERBP1	CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1	SERPINE1 mRNA binding protein 1	protein-coding
67.8666	chr22	23072026	23072765	+	0.2	NA	intron (NM_002073, intron 1 of 2)	intron (NM_002073, intron 1 of 2)	1876	NM_002073	2781	Hs.584760	NM_002073	ENSG00000128266	GNAZ	gz-alpha	G protein subunit alpha z	protein-coding
42.3-3	chr20	62564531	62564825	+	0.2	NA	promoter-TSS (NR_029676)	promoter-TSS (NR_029676)	-234	NR_029676	406923		NR_029676	ENSG00000284508	MIR133A2	MIRN133A2|mir-133a-2	microRNA 133a-2	ncRNA
20.1-2	chr12	10505207	10505399	+	0.2	NA	promoter-TSS (NM_001357734)	promoter-TSS (NM_001357734)	-590	NM_001357731	255308	Hs.547382	NM_001357731	ENSG00000180574	EIF2S3B	EIF2S3L|eIF-2gA|eIF2gA	eukaryotic translation initiation factor 2 subunit gamma B	protein-coding
42.4	chr1	173825324	173825627	+	0.2	NA	promoter-TSS (NM_001127181)	promoter-TSS (NM_001127181)	802	NM_001365213	55157	Hs.647707	NM_018122	ENSG00000117593	DARS2	ASPRS|LBSL|MT-ASPRS|mtAspRS	aspartyl-tRNA synthetase 2, mitochondrial	protein-coding
23.1333-6	chr3	141652161	141652355	+	0.2	NA	Intergenic	Intergenic	-10941	NR_136190	646730	Hs.570677	NR_136190		LINC02618	-	long intergenic non-protein coding RNA 2618	ncRNA
28.8-17	chr9	137659335	137659550	+	0.2	NA	intron (NM_001354612, intron 1 of 8)	FLAM_A|SINE|Alu	40437	NM_001354259	79813	Hs.495511	NM_024757	ENSG00000181090	EHMT1	EHMT1-IT1|EUHMTASE1|Eu-HMTase1|FP13812|GLP|GLP1|KLEFS1|KMT1D	euchromatic histone lysine methyltransferase 1	protein-coding
52.0666-2	chr6	47353255	47353749	+	0.2	NA	Intergenic	Intergenic	-43597	NM_014452	27242	Hs.443577	NM_014452	ENSG00000146072	TNFRSF21	BM-018|CD358|DR6	TNF receptor superfamily member 21	protein-coding
40.6-2	chr15	64236683	64236931	+	0.2	NA	intron (NM_001329607, intron 4 of 11)	L1PB4|LINE|L1	-73652	NM_000942	5479	Hs.434937	NM_000942	ENSG00000166794	PPIB	B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP	peptidylprolyl isomerase B	protein-coding
27.5334-4	chr6	121849263	121849601	+	0.2	NA	Intergenic	Intergenic	413786	NM_000165	2697	Hs.74471	NM_000165	ENSG00000152661	GJA1	AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA	gap junction protein alpha 1	protein-coding
58.8	chr1	44329326	44330015	+	0.2	NA	intron (NM_001301701, intron 2 of 7)	intron (NM_001301701, intron 2 of 7)	25587	NM_024066	79033	Hs.731413	NM_024066	ENSG00000117419	ERI3	PINT1|PRNPIP	ERI1 exoribonuclease family member 3	protein-coding
44.2667-2	chr3	97116424	97116785	+	0.2	NA	intron (NM_001080448, intron 3 of 17)	L1MA9|LINE|L1	302010	NM_001278301	285220	Hs.272208	NM_173655	ENSG00000080224	EPHA6	EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066	EPH receptor A6	protein-coding
48.6	chr1	32046627	32047076	+	0.2	NA	intron (NR_073499, intron 10 of 10)	intron (NR_073499, intron 10 of 10)	-25180	NM_001319677	55116	Hs.25544	NM_018056	ENSG00000121775	TMEM39B	-	transmembrane protein 39B	protein-coding
44.7333	chr10	99727832	99728213	+	0.2	NA	intron (NM_004376, intron 2 of 8)	intron (NM_004376, intron 2 of 8)	-4212	NM_015960	51076	Hs.16606	NM_015960	ENSG00000119929	CUTC	CGI-32	cutC copper transporter	protein-coding
26.7667-6	chr15	76060634	76061054	+	0.2	NA	intron (NM_152335, intron 1 of 10)	intron (NM_152335, intron 1 of 10)	859	NM_152335	123591	Hs.661411	NM_152335	ENSG00000169758	TMEM266	C15orf27|HVRP1|HsHVRP1|hTMEM266	transmembrane protein 266	protein-coding
26.9334-2	chr2	38174296	38174439	+	0.2	NA	intron (NR_027252, intron 2 of 2)	L1MA9|LINE|L1	43262	NR_027252	285154	Hs.353894	NM_173652	ENSG00000232973	CYP1B1-AS1	C2orf58	CYP1B1 antisense RNA 1	ncRNA
34.6-8	chr20	41545332	41545543	+	0.2	NA	intron (NM_032221, intron 2 of 36)	intron (NM_032221, intron 2 of 36)	72940	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding
22.6-22	chr8	97307498	97307674	+	0.2	NA	intron (NR_125390, intron 2 of 2)	intron (NR_125390, intron 2 of 2)	-29658	NM_033512	85453	Hs.173094	NM_033512	ENSG00000180543	TSPYL5	-	TSPY like 5	protein-coding
29.6-11	chr3	172085149	172085417	+	0.2	NA	intron (NM_001135095, intron 1 of 25)	Charlie8|DNA|hAT-Charlie	44752	NM_001135095	64778	Hs.744888	NM_022763	ENSG00000075420	FNDC3B	FAD104|PRO4979|YVTM2421	fibronectin type III domain containing 3B	protein-coding
63.6667-2	chr14	78043937	78044417	+	0.2	NA	Intergenic	Intergenic	-126196	NR_073547	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
26-9	chr6	91714080	91714243	+	0.2	NA	Intergenic	Intergenic	-23733	NR_104154	101929083	Hs.586238	NR_104154		CASC6	-	cancer susceptibility 6	ncRNA
62.6-3	chr20	42268297	42268664	+	0.2	NA	intron (NM_007050, intron 13 of 30)	intron (NM_007050, intron 13 of 30)	-417003	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA
31.0333-8	chr6	93301017	93301581	+	0.2	NA	intron (NM_004440, intron 5 of 16)	L1MA4|LINE|L1	118260	NM_001288629	2045	Hs.73962	NM_004440	ENSG00000135333	EPHA7	EHK-3|EHK3|EK11|HEK11	EPH receptor A7	protein-coding
24.7333-5	chr17	27385300	27385453	+	0.2	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	-32629	NR_033892	440419	Hs.385755	NR_033892	ENSG00000266433	TBC1D3P5	-	TBC1 domain family member 3 pseudogene 5	pseudo
31.1333-3	chr15	96472437	96472649	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	138778	NM_001145157	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding
16.6667-4	chr16	59273364	59273517	+	0.2	NA	Intergenic	Intergenic	481751	NR_028471	644649	Hs.250392	NR_028471		APOOP5	-	apolipoprotein O pseudogene 5	pseudo
46.4-6	chr9	123643008	123643263	+	0.2	NA	intron (NM_001352968, intron 8 of 18)	intron (NM_001352968, intron 8 of 18)	-157513	NR_106972	102465688		NR_106972	ENSG00000274932	MIR7150	hsa-mir-7150	microRNA 7150	ncRNA
44.6667-4	chr8	130196533	130196886	+	0.2	NA	intron (NM_001362925, intron 5 of 29)	intron (NM_001362925, intron 5 of 29)	99824	NR_002765	29065	Hs.639318	NR_002765		ASAP1-IT1	ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050	ASAP1 intronic transcript 1	ncRNA
52.5334	chr12	40086237	40086528	+	0.2	NA	intron (NM_052885, intron 1 of 9)	intron (NM_052885, intron 1 of 9)	19699	NM_052885	114134	Hs.558595	NM_052885	ENSG00000151229	SLC2A13	HMIT	solute carrier family 2 member 13	protein-coding
67.8001	chr2	115021455	115022091	+	0.2	NA	intron (NM_001321910, intron 2 of 26)	L1PB1|LINE|L1	-42800	NM_001178037	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
35.0666-4	chr14	104955337	104955674	+	0.2	NA	exon (NM_138420, exon 5 of 7)	exon (NM_138420, exon 5 of 7)	15002	NM_001350929	113146	Hs.441783	NM_138420	ENSG00000185567	AHNAK2	C14orf78	AHNAK nucleoprotein 2	protein-coding
45.7-2	chr14	94405362	94405812	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	-14895	NM_001127701	5265	Hs.525557	NM_000295	ENSG00000197249	SERPINA1	A1A|A1AT|AAT|PI|PI1|PRO2275|alpha1AT|nNIF	serpin family A member 1	protein-coding
42.2-6	chr7	90738640	90738983	+	0.2	NA	intron (NM_001287137, intron 2 of 12)	intron (NM_001287137, intron 2 of 12)	28995	NM_001287137	5218	Hs.258576	NM_012395	ENSG00000058091	CDK14	PFTAIRE1|PFTK1	cyclin dependent kinase 14	protein-coding
24.8-9	chr8	27589661	27589884	+	0.2	NA	Intergenic	Intergenic	20979	NR_106902	102465508		NR_106902	ENSG00000284280	MIR6843	hsa-mir-6843	microRNA 6843	ncRNA
54.7001-2	chr4	189286531	189286830	+	0.2	NA	Intergenic	Intergenic	-372926	NR_121679	101928971	Hs.519164	NR_121679	ENSG00000250739	LINC01262	TCONS_l2_00021807	long intergenic non-protein coding RNA 1262	ncRNA
54.5333-4	chr5	158022354	158022964	+	0.2	NA	Intergenic	Intergenic	-163514	NM_014666	9685	Hs.644000	NM_014666	ENSG00000113282	CLINT1	CLINT|ENTH|EPN4|EPNR	clathrin interactor 1	protein-coding
49-9	chr5	31642221	31642731	+	0.2	NA	intron (NM_178140, intron 1 of 24)	intron (NM_178140, intron 1 of 24)	3345	NM_178140	23037	Hs.481819	NM_015022	ENSG00000133401	PDZD2	AIPC|PAPIN|PDZK3|PIN1	PDZ domain containing 2	protein-coding
63.3999-2	chr12	26211562	26212063	+	0.2	NA	intron (NM_005086, intron 1 of 2)	intron (NM_005086, intron 1 of 2)	16239	NM_005086	8082	Hs.183428	NM_005086	ENSG00000123096	SSPN	DAGA5|KRAG|NSPN|SPN1|SPN2	sarcospan	protein-coding
30.5-10	chr20	21141381	21141585	+	0.2	NA	intron (NM_001352436, intron 4 of 13)	intron (NM_001352436, intron 4 of 13)	15401	NM_001163023	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding
31.2666-7	chr5	157820439	157820625	+	0.2	NA	intron (NM_001195556, intron 1 of 11)	intron (NM_001195556, intron 1 of 11)	38613	NM_001195556	9685	Hs.644000	NM_014666	ENSG00000113282	CLINT1	CLINT|ENTH|EPN4|EPNR	clathrin interactor 1	protein-coding
30.5-9	chr2	190938179	190938616	+	0.2	NA	intron (NM_014905, intron 14 of 17)	intron (NM_014905, intron 14 of 17)	57576	NM_001256310	2744	Hs.116448	NM_014905	ENSG00000115419	GLS	AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA	glutaminase	protein-coding
44.8-3	chr5	103012073	103012401	+	0.2	NA	intron (NM_001364590, intron 22 of 25)	L1MA2|LINE|L1	107901	NM_001317954	54826	Hs.24088	NM_017676	ENSG00000145723	GIN1	GIN-1|TGIN1|ZH2C2	gypsy retrotransposon integrase 1	protein-coding
33.7999	chr17	76143535	76143835	+	0.2	NA	3' UTR (NM_001330501, exon 18 of 18)	3' UTR (NM_001330501, exon 18 of 18)	-2440	NM_001454	2302	Hs.651204	NM_001454	ENSG00000129654	FOXJ1	FKHL13|HFH-4|HFH4	forkhead box J1	protein-coding
30.2-10	chr3	109882537	109882791	+	0.2	NA	Intergenic	Intergenic	279836	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
22.3333-17	chr9	93428898	93429015	+	0.2	NA	Intergenic	L1ME4a|LINE|L1	22652	NR_136232	158293	Hs.350364	NM_198841	ENSG00000188938	FAM120AOS	C9orf10OS	family with sequence similarity 120A opposite strand	protein-coding
46.1333-9	chr6	145143481	145144021	+	0.2	NA	Intergenic	MER2|DNA|TcMar-Tigger	543126	NM_001368132	7957	Hs.486696	NM_005670	ENSG00000112425	EPM2A	EPM2|MELF	EPM2A glucan phosphatase, laforin	protein-coding
18.8666-3	chr8	68371070	68371201	+	0.2	NA	intron (NR_146187, intron 1 of 13)	ERVL-E-int|LTR|ERVL	-39644	NR_038877	286189	Hs.593427	NR_038877	ENSG00000248801	C8orf34-AS1	-	C8orf34 antisense RNA 1	ncRNA
40.6667-7	chr4	97940562	97940897	+	0.2	NA	intron (NM_174952, intron 8 of 10)	HAL1ME|LINE|L1	202747	NM_174952	285555	Hs.680226	NM_174952	ENSG00000163116	STPG2	C4orf37	sperm tail PG-rich repeat containing 2	protein-coding
38.6667-3	chr3	159267511	159267740	+	0.2	NA	intron (NM_001197113, intron 4 of 10)	intron (NM_001197113, intron 4 of 10)	-5622	NM_001197108	29970	Hs.134665	NM_014575	ENSG00000151967	SCHIP1	SCHIP-1	schwannomin interacting protein 1	protein-coding
23.2-15	chr5	14365309	14365431	+	0.2	NA	intron (NM_007118, intron 15 of 56)	intron (NM_007118, intron 15 of 56)	-98613	NR_145815	109623458		NR_145815		SNORD170	-	small nucleolar RNA, C/D box 170	snoRNA
57.2666	chr18	9670467	9670870	+	0.2	NA	Intergenic	L1MC5a|LINE|L1	-37633	NM_006868	11031	Hs.99528	NM_006868	ENSG00000168461	RAB31	Rab22B	RAB31, member RAS oncogene family	protein-coding
59.4666-3	chr3	104498746	104499179	+	0.2	NA	Intergenic	Intergenic	-867751	NM_001243281	214	Hs.591293	NM_001627	ENSG00000170017	ALCAM	CD166|MEMD	activated leukocyte cell adhesion molecule	protein-coding
49.9333	chr14	69308352	69308675	+	0.2	NA	intron (NM_020692, intron 1 of 15)	L1ME4b|LINE|L1	48355	NM_001168368	57452	Hs.21035	NM_020692	ENSG00000100626	GALNT16	GALNACT16|GALNTL1|GalNAc-T16	polypeptide N-acetylgalactosaminyltransferase 16	protein-coding
16.2667-13	chr7	68533858	68533991	+	0.2	NA	Intergenic	THE1B|LTR|ERVL-MaLR	513671	NR_120514	102723427	Hs.583491	NR_120514	ENSG00000225209	LOC102723427	-	uncharacterized LOC102723427	ncRNA
45.5667	chr16	74654093	74654320	+	0.2	NA	intron (NM_001370540, intron 3 of 13)	L1M4|LINE|L1	12671	NM_001370542	55159	Hs.567525	NM_018124	ENSG00000168411	RFWD3	FANCW|RNF201	ring finger and WD repeat domain 3	protein-coding
24-12	chr3	185496911	185497149	+	0.2	NA	intron (NM_080652, intron 1 of 4)	intron (NM_080652, intron 1 of 4)	2005	NM_080652	90407	Hs.677570	NM_080652	ENSG00000163900	TMEM41A	2900010K02Rik	transmembrane protein 41A	protein-coding
46.5	chr1	28702387	28702800	+	0.2	NA	intron (NM_001319674, intron 7 of 9)	intron (NM_001319674, intron 7 of 9)	33809	NM_024482	10691	Hs.632373	NM_006582	ENSG00000162419	GMEB1	P96PIF|PIF96	glucocorticoid modulatory element binding protein 1	protein-coding
39.0334	chr2	122791953	122792281	+	0.2	NA	Intergenic	Intergenic	281364	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
39.9667	chr12	20628904	20629417	+	0.2	NA	intron (NM_000921, intron 5 of 15)	intron (NM_000921, intron 5 of 15)	57296	NM_001244683	5139	Hs.386791	NM_000921	ENSG00000172572	PDE3A	CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB	phosphodiesterase 3A	protein-coding
68.2-2	chr4	104551085	104551558	+	0.2	NA	intron (NR_125926, intron 1 of 9)	intron (NR_125926, intron 1 of 9)	-56427	NR_132741	80319	Hs.12248	NM_025212	ENSG00000168772	CXXC4	IDAX	CXXC finger protein 4	protein-coding
37.7-5	chr3	128569927	128570248	+	0.2	NA	Intergenic	AluJr|SINE|Alu	5999	NR_125802	23434	Hs.194283	NM_007354	ENSG00000198685	LINC01565	C3orf27|GR6	long intergenic non-protein coding RNA 1565	ncRNA
36.9	chr10	57209567	57209804	+	0.2	NA	Intergenic	Intergenic	94874	NR_037490	100500834		NR_037490	ENSG00000264747	MIR3924	-	microRNA 3924	ncRNA
25.3333-6	chr2	16648040	16648306	+	0.2	NA	intron (NM_030797, intron 1 of 11)	intron (NM_030797, intron 1 of 11)	17661	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding
40.8-7	chr5	82834518	82834907	+	0.2	NA	Intergenic	L1M1|LINE|L1	-5443	NR_039773	100616297		NR_039773	ENSG00000283359	MIR3977	-	microRNA 3977	ncRNA
36.8-3	chr14	46519752	46520044	+	0.2	NA	Intergenic	MER34|LTR|ERV1	48539	NR_102700	100506412	Hs.207545	NR_102699	ENSG00000258700	LINC00871	-	long intergenic non-protein coding RNA 871	ncRNA
59.7667	chr2	109100163	109100502	+	0.2	NA	Intergenic	MER1B|DNA|hAT-Charlie	-28873	NM_001099289	344558	Hs.171244	NM_001099289	ENSG00000172985	SH3RF3	POSH2|SH3MD4	SH3 domain containing ring finger 3	protein-coding
52.2-3	chr6	140438344	140438875	+	0.2	NA	Intergenic	Intergenic	233357	NR_037441	100500879		NR_037441	ENSG00000263514	MIR3668	-	microRNA 3668	ncRNA
35.8666-3	chr10	63527082	63527345	+	0.2	NA	intron (NM_001001330, intron 1 of 7)	L2a|LINE|L2	-5323	NM_001322258	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding
55.4-3	chr4	61224430	61224820	+	0.2	NA	intron (NM_001371342, intron 1 of 20)	intron (NM_001371342, intron 1 of 20)	22453	NM_001371342								
20.1-3	chr14	38614564	38614704	+	0.2	NA	Intergenic	Intergenic	-267962	NR_135256	105370457	Hs.128254	NR_135256		LOC105370457	-	uncharacterized LOC105370457	ncRNA
18.0667-2	chr12	64175094	64175258	+	0.2	NA	Intergenic	Intergenic	47120	NM_001300941	144577	Hs.444671	NM_152440	ENSG00000174206	C12orf66	-	chromosome 12 open reading frame 66	protein-coding
20.1334	chr10	48565220	48565333	+	0.2	NA	intron (NR_144642, intron 2 of 9)	MIRb|SINE|MIR	39797	NR_144642	58504	Hs.655672	NM_021226	ENSG00000128805	ARHGAP22	RhoGAP2|RhoGap22	Rho GTPase activating protein 22	protein-coding
19.7667-6	chr3	1461325	1461667	+	0.2	NA	Intergenic	L2b|LINE|L2	368472	NM_001349356	27255	Hs.387300	NM_014461	ENSG00000134115	CNTN6	NB3	contactin 6	protein-coding
24.0667-5	chr12	52722766	52722967	+	0.2	NA	Intergenic	Intergenic	-19342	NM_175078	374454	Hs.334989	NM_175078	ENSG00000189182	KRT77	K1B|KRT1B	keratin 77	protein-coding
25.6-2	chr10	98016627	98016810	+	0.2	NA	intron (NM_001206528, intron 1 of 14)	MER5B|DNA|hAT-Charlie	13903	NM_018058	55118	Hs.500736	NM_018058	ENSG00000095713	CRTAC1	ASPIC|ASPIC1|CEP-68|CEP68|LOTUS	cartilage acidic protein 1	protein-coding
49.5-3	chr4	70998373	70998862	+	0.2	NA	intron (NM_000788, intron 2 of 6)	MER2|DNA|TcMar-Tigger	4968	NM_000788	1633	Hs.709	NM_000788	ENSG00000156136	DCK	-	deoxycytidine kinase	protein-coding
38.9333-7	chr7	47146077	47146446	+	0.2	NA	Intergenic	L2|LINE|L2	318542	NR_145813	109623468		NR_145813		SNORD151	-	small nucleolar RNA, C/D box 151	snoRNA
22.0666	chr10	25486312	25486499	+	0.2	NA	intron (NM_020752, intron 5 of 10)	MIR|SINE|MIR	-165307	NR_108067	101929052	Hs.128298	NR_108067	ENSG00000280809	LINC00836	-	long intergenic non-protein coding RNA 836	ncRNA
62.8	chr11	13603940	13604321	+	0.2	NA	Intergenic	Intergenic	-64538	NM_032228	84188	Hs.501991	NM_032228	ENSG00000197601	FAR1	MLSTD2|PFCRD|SDR10E1	fatty acyl-CoA reductase 1	protein-coding
27.3667-3	chr11	115328326	115328597	+	0.2	NA	intron (NM_001098517, intron 1 of 8)	L2a|LINE|L2	-5116	NR_135108	105369509	Hs.736064	NR_135108		LOC105369509	-	uncharacterized LOC105369509	ncRNA
25.6666-5	chr4	28758809	28759003	+	0.2	NA	Intergenic	Intergenic	-60676	NR_036237	100422937		NR_036237	ENSG00000283275	MIR4275	-	microRNA 4275	ncRNA
74.0333	chr7	49590966	49591733	+	0.2	NA	Intergenic	Intergenic	-182289	NM_198570	375567	Hs.629302	NM_198570	ENSG00000188730	VWC2	PSST739|UNQ739	von Willebrand factor C domain containing 2	protein-coding
31.4333-9	chr9	70015832	70016258	+	0.2	NA	Intergenic	Intergenic	-27536	NR_125850	256691	Hs.547172	NM_153267	ENSG00000165072	MAMDC2	-	MAM domain containing 2	protein-coding
18.5-5	chr17	39689063	39689200	+	0.2	NA	intron (NM_001005862, intron 2 of 29)	intron (NM_001005862, intron 2 of 29)	1047	NM_001005862	2064	Hs.446352	NM_004448	ENSG00000141736	ERBB2	CD340|HER-2|HER-2/neu|HER2|MLN 19|NEU|NGL|TKR1	erb-b2 receptor tyrosine kinase 2	protein-coding
34.5-2	chr1	245993143	245993479	+	0.2	NA	intron (NM_022743, intron 5 of 11)	MIR|SINE|MIR	424101	NM_022743	64754	Hs.567571	NM_022743	ENSG00000185420	SMYD3	KMT3E|ZMYND1|ZNFN3A1|bA74P14.1	SET and MYND domain containing 3	protein-coding
45.7333-8	chr7	8505149	8505445	+	0.2	NA	intron (NM_152745, intron 2 of 2)	intron (NM_152745, intron 2 of 2)	71688	NM_152745	30010	Hs.487564	NM_152745	ENSG00000122584	NXPH1	NPH1|Nbla00697	neurexophilin 1	protein-coding
74.3335	chr5	29699916	29700401	+	0.2	NA	Intergenic	L1MC3|LINE|L1	-180402	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
38.7-3	chr2	66186784	66187012	+	0.2	NA	Intergenic	Intergenic	171430	NR_039938	100616464		NR_039938	ENSG00000264525	MIR4778	-	microRNA 4778	ncRNA
19.9-8	chr2	181286284	181286443	+	0.2	NA	intron (NR_130784, intron 3 of 4)	intron (NR_130784, intron 3 of 4)	19289	NR_039637	100616213		NR_039637	ENSG00000266705	MIR4437	mir-4437	microRNA 4437	ncRNA
49.8334-2	chr2	99917984	99918250	+	0.2	NA	intron (NM_001025108, intron 6 of 23)	intron (NM_001025108, intron 6 of 23)	187466	NM_001025108	3899	Hs.444414	NM_002285	ENSG00000144218	AFF3	LAF4|MLLT2-like	AF4/FMR2 family member 3	protein-coding
49.7333-2	chr2	28877595	28877996	+	0.2	NA	Intergenic	L2b|LINE|L2	-7486	NM_017910	55006	Hs.468026	NM_017910	ENSG00000171103	TRMT61B	-	tRNA methyltransferase 61B	protein-coding
41.8666-5	chr16	61572951	61573271	+	0.2	NA	Intergenic	L1PA14|LINE|L1	463327	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
43.1333-2	chr11	26644312	26644807	+	0.2	NA	intron (NM_031418, intron 23 of 26)	L1ME3G|LINE|L1	-72296	NM_001135091	143662	Hs.407152	NM_145650	ENSG00000169550	MUC15	MUC-15|PAS3|PASIII	mucin 15, cell surface associated	protein-coding
20.5333-9	chr3	62516925	62517092	+	0.2	NA	intron (NM_003716, intron 14 of 29)	intron (NM_003716, intron 14 of 29)	-143458	NM_018008	55079	Hs.241523	NM_018008	ENSG00000153266	FEZF2	FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312	FEZ family zinc finger 2	protein-coding
29.6-6	chr14	21441036	21441254	+	0.2	NA	intron (NM_001170629, intron 1 of 37)	intron (NM_001170629, intron 1 of 37)	-3870	NM_020920	57680	Hs.530698	NM_020920	ENSG00000100888	CHD8	AUTS18|HELSNF1	chromodomain helicase DNA binding protein 8	protein-coding
67.8	chr8	133819690	133820407	+	0.2	NA	Intergenic	Intergenic	-42696	NR_125422	101927798	Hs.615036	NR_125422	ENSG00000253165	LOC101927798	-	uncharacterized LOC101927798	ncRNA
60.1333-3	chr2	110200214	110200571	+	0.2	NA	intron (NM_207181, intron 2 of 19)	AluSz|SINE|Alu	4621	NM_001128178	4867	Hs.280388	NM_000272	ENSG00000144061	NPHP1	JBTS4|NPH1|SLSN1	nephrocystin 1	protein-coding
48.6001	chr5	30713747	30714167	+	0.2	NA	Intergenic	MLT1H|LTR|ERVL-MaLR	-479729	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
52.7333-3	chr5	95668966	95669746	+	0.2	NA	intron (NR_125330, intron 2 of 7)	intron (NR_125330, intron 2 of 7)	13635	NR_125329	83890	Hs.50499	NM_031952	ENSG00000145757	SPATA9	NYD-SP16	spermatogenesis associated 9	protein-coding
46.4-4	chr5	110314765	110315359	+	0.2	NA	Intergenic	L1MA4|LINE|L1	198853	NR_031644	100302159		NR_031644	ENSG00000221436	MIR548F3	MIR548F-3|MIRN548F3|hsa-mir-548f-3	microRNA 548f-3	ncRNA
18.3333-7	chr17	69584917	69585071	+	0.2	NA	Intergenic	L2a|LINE|L2	-8993	NR_109972	101928122	Hs.579342	NR_109971	ENSG00000227517	LINC01483	-	long intergenic non-protein coding RNA 1483	ncRNA
42.5333	chr17	59086896	59087302	+	0.2	NA	intron (NR_148346, intron 4 of 23)	AluSx1|SINE|Alu	19781	NM_001005207	4591	Hs.579079	NM_015294	ENSG00000108395	TRIM37	MUL|POB1|TEF3	tripartite motif containing 37	protein-coding
15.1333	chr1	30837902	30837977	+	0.2	NA	Intergenic	MER63A|DNA|hAT-Blackjack	13287	NR_146732	105378622	Hs.209284	NR_146732	ENSG00000223382	LINC01778	-	long intergenic non-protein coding RNA 1778	ncRNA
64.9332-2	chr22	39623935	39624464	+	0.2	NA	intron (NM_001003406, intron 4 of 35)	(TG)n|Simple_repeat|Simple_repeat	53446	NM_021096	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding
36.4666-2	chr6	65760004	65760297	+	0.2	NA	Intergenic	L1MA9|LINE|L1	-27729	NR_026540	442229	Hs.390414	NR_026540		SLC25A51P1	MCART3P|bA707M13.1	SLC25A51 pseudogene 1	pseudo
89.1667	chr6	107526511	107527384	+	0.2	NA	intron (NM_018013, intron 3 of 6)	intron (NM_018013, intron 3 of 6)	36830	NM_018013	55084	Hs.445244	NM_018013	ENSG00000112320	SOBP	JXC1|MRAMS	sine oculis binding protein homolog	protein-coding
48.2-2	chr11	13831794	13832163	+	0.2	NA	intron (NR_149108, intron 3 of 3)	MLT1G|LTR|ERVL-MaLR	38638	NR_149109	105376561	Hs.512244	NR_149109	ENSG00000254930	LINC02545	-	long intergenic non-protein coding RNA 2545	ncRNA
69.8667-3	chr5	127253652	127254175	+	0.2	NA	Intergenic	Intergenic	-36851	NM_001308121	84466	Hs.438709	NM_032446	ENSG00000145794	MEGF10	EMARDD	multiple EGF like domains 10	protein-coding
43.9667	chr14	75689770	75690021	+	0.2	NA	intron (NM_015072, intron 5 of 31)	L1ME1|LINE|L1	28649	NM_015072	23093	Hs.709609	NM_015072	ENSG00000119685	TTLL5	CORD19|KIAA0998|STAMP	tubulin tyrosine ligase like 5	protein-coding
39.4	chr1	93572427	93572678	+	0.2	NA	intron (NM_001308251, intron 4 of 7)	intron (NM_001308251, intron 4 of 7)	12610	NM_001308251	8412	Hs.36958	NM_003567	ENSG00000137936	BCAR3	AND-34|NSP2|SH2D3B	BCAR3 adaptor protein, NSP family member	protein-coding
48.3333-5	chr2	57771270	57771617	+	0.2	NA	Intergenic	L1ME4a|LINE|L1	-136208	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
28.9333-7	chr2	135021763	135021966	+	0.2	NA	intron (NM_001282883, intron 1 of 7)	intron (NM_001282883, intron 1 of 7)	1785	NM_001321177	80122	Hs.659395	NM_025052	ENSG00000176601	MAP3K19	RCK|YSK4	mitogen-activated protein kinase kinase kinase 19	protein-coding
32.8-5	chr18	45101408	45101622	+	0.2	NA	Intergenic	Intergenic	-66448	NM_001371319								
28.9999	chr3	17520682	17520920	+	0.2	NA	intron (NM_001349075, intron 1 of 22)	MER53|DNA|hAT	179219	NM_001134381	9779	Hs.475629	NM_014744	ENSG00000131374	TBC1D5	-	TBC1 domain family member 5	protein-coding
67.3334	chr17	69984182	69984762	+	0.2	NA	TTS (NR_110874)	TTS (NR_110874)	22765	NR_110875	102723487	Hs.451409	NR_110874	ENSG00000237560	LINC01497	-	long intergenic non-protein coding RNA 1497	ncRNA
58.2333-2	chr16	9605525	9605899	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	-150207	NR_126349	104266959	Hs.578888	NR_126349	ENSG00000261075	LINC01195	-	long intergenic non-protein coding RNA 1195	ncRNA
32.4-14	chr7	3990679	3990981	+	0.2	NA	intron (NM_152744, intron 14 of 44)	intron (NM_152744, intron 14 of 44)	-138855	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
50.4-3	chr2	120319870	120320364	+	0.2	NA	Intergenic	Intergenic	-26019	NM_002193	3625	Hs.1735	NM_002193	ENSG00000163083	INHBB	-	inhibin subunit beta B	protein-coding
45.7333-3	chr11	32674234	32674836	+	0.2	NA	intron (NM_001008391, intron 9 of 17)	MLT1L|LTR|ERVL-MaLR	90704	NM_001307929	10480	Hs.502244	NM_006360	ENSG00000149100	EIF3M	B5|GA17|PCID1|TANGO7|hfl-B5	eukaryotic translation initiation factor 3 subunit M	protein-coding
26.5-7	chr20	52505566	52505735	+	0.2	NA	Intergenic	L1MA3|LINE|L1	-115188	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA
35-3	chr12	96164844	96165046	+	0.2	NA	Intergenic	Intergenic	-29430	NM_005230	2004	Hs.46523	NM_005230	ENSG00000111145	ELK3	ERP|NET|SAP-2|SAP2	ETS transcription factor ELK3	protein-coding
30.2-5	chr19	50881844	50882119	+	0.2	NA	TTS (NR_002948)	TTS (NR_002948)	8542	NR_045762	3817	Hs.515560	NM_005551	ENSG00000167751	KLK2	KLK2A2|hGK-1|hK2	kallikrein related peptidase 2	protein-coding
45.2-3	chr6	74796990	74797438	+	0.2	NA	Intergenic	Intergenic	331568	NR_145788	109623475		NR_145788		SNORD156	-	small nucleolar RNA, C/D box 156	snoRNA
43.6666	chr2	237238092	237238419	+	0.2	NA	Intergenic	Intergenic	152366	NM_006710	10920	Hs.531713	NM_006710	ENSG00000198612	COPS8	COP9|CSN8|SGN8	COP9 signalosome subunit 8	protein-coding
27.7333-5	chr15	65796289	65796545	+	0.2	NA	Intergenic	L2a|LINE|L2	-4124	NM_001144823	10260	Hs.654567	NM_005848	ENSG00000174485	DENND4A	IRLB|MYCPBP	DENN domain containing 4A	protein-coding
34.5333-2	chr1	190046982	190047215	+	0.2	NA	Intergenic	Intergenic	428912	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
23.1-15	chr6	125220142	125220356	+	0.2	NA	intron (NM_003287, intron 2 of 6)	intron (NM_003287, intron 2 of 6)	16538	NM_001318907	7164	Hs.591347	NM_003287	ENSG00000111907	TPD52L1	D53	TPD52 like 1	protein-coding
28.8666	chr11	33757919	33758100	+	0.2	NA	intron (NM_012175, intron 4 of 10)	intron (NM_012175, intron 4 of 10)	16511	NM_033406	26273	Hs.406787	NM_012175	ENSG00000110429	FBXO3	FBA|FBX3	F-box protein 3	protein-coding
37.3333-5	chr4	69978128	69978387	+	0.2	NA	Intergenic	L1PA15|LINE|L1	-17246	NM_001302770	1447	Hs.2242	NM_001891	ENSG00000135222	CSN2	CASB	casein beta	protein-coding
47.6667	chr18	5262473	5262964	+	0.2	NA	Intergenic	L1PA13|LINE|L1	24618	NR_015389	339290	Hs.643553	NR_015389	ENSG00000263753	LINC00667	-	long intergenic non-protein coding RNA 667	ncRNA
13.8-6	chr8	135447643	135447781	+	0.2	NA	Intergenic	Intergenic	-9744	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	KH RNA binding domain containing, signal transduction associated 3	protein-coding
35.4-6	chr5	106149856	106150123	+	0.2	NA	Intergenic	Charlie1|DNA|hAT-Charlie	861025	NR_104671	102467213	Hs.570923	NR_104671	ENSG00000251027	LINC01950	-	long intergenic non-protein coding RNA 1950	ncRNA
72.7999	chr15	38978410	38979050	+	0.2	NA	Intergenic	L1PA17|LINE|L1	-271939	NR_144508	400360	Hs.376109	NM_207445	ENSG00000175746	C15orf54	-	chromosome 15 open reading frame 54 (putative)	ncRNA
34.8-7	chr20	31768123	31768300	+	0.2	NA	intron (NM_012112, intron 5 of 17)	AluJb|SINE|Alu	28921	NM_012112	22974	Hs.244580	NM_012112	ENSG00000088325	TPX2	C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100	TPX2 microtubule nucleation factor	protein-coding
57.4666	chr18	3687146	3687558	+	0.2	NA	intron (NM_001308390, intron 4 of 10)	Charlie7|DNA|hAT-Charlie	83615	NR_119377	84777	Hs.659053	NM_032691		DLGAP1-AS2	-	DLGAP1 antisense RNA 2	ncRNA
33.3333-6	chr3	116951005	116951265	+	0.2	NA	Intergenic	Intergenic	29704	NR_121607	100506724	Hs.125983	NR_121607	ENSG00000242385	LINC00901	LSAMP-AS4|TCONS_00005428	long intergenic non-protein coding RNA 901	ncRNA
46.3333-5	chr9	83186018	83186343	+	0.2	NA	Intergenic	MER58A|DNA|hAT-Charlie	81088	NM_001244962	257019	Hs.127535	NM_174938	ENSG00000172159	FRMD3	4.1O|EPB41L4O|EPB41LO|P410	FERM domain containing 3	protein-coding
38.7-8	chr4	83481617	83482157	+	0.2	NA	intron (NM_139076, intron 2 of 8)	AluSx|SINE|Alu	3213	NM_139076	84142	Hs.334772	NM_139076	ENSG00000163322	ABRAXAS1	ABRA1|CCDC98|FAM175A	abraxas 1, BRCA1 A complex subunit	protein-coding
39.2-5	chr22	33825307	33825649	+	0.2	NA	intron (NM_001362953, intron 1 of 14)	THE1C|LTR|ERVL-MaLR	94950	NM_004737	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding
42.1667	chr15	53214699	53215367	+	0.2	NA	Intergenic	L1MC4a|LINE|L1	98668	NR_147181	105370822	Hs.527821	NR_147181	ENSG00000259237	LINC02490	-	long intergenic non-protein coding RNA 2490	ncRNA
34.9999-2	chr6	148191653	148191985	+	0.2	NA	Intergenic	Intergenic	-80509	NM_001346505	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	CAPOK|DUH1|SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding
65.8-2	chr2	99734165	99734676	+	0.2	NA	intron (NM_001025108, intron 9 of 23)	L1ME3D|LINE|L1	-244403	NR_135650	51455	Hs.443077	NM_016316	ENSG00000135945	REV1	AIBP80|REV1L	REV1 DNA directed polymerase	protein-coding
41.7333-7	chrX	7236654	7236941	+	0.2	NA	intron (NM_000351, intron 1 of 9)	MER4-int|LTR|ERV1	-15447	NM_001320753	412	Hs.522578	NM_000351	ENSG00000101846	STS	ARSC|ARSC1|ASC|ES|SSDD|XLI	steroid sulfatase	protein-coding
28.1333-13	chr8	134119878	134120406	+	0.2	NA	Intergenic	MIRb|SINE|MIR	233646	NR_125424	101927822	Hs.129114	NR_125424	ENSG00000253593	LOC101927822	-	uncharacterized LOC101927822	ncRNA
33.2-2	chr10	110198673	110198894	+	0.2	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-8822	NM_130439	4601	Hs.602078	NM_005962	ENSG00000119950	MXI1	MAD2|MXD2|MXI|bHLHc11	MAX interactor 1, dimerization protein	protein-coding
37.4666-2	chr22	22659479	22659787	+	0.2	NA	Intergenic	AluY|SINE|Alu	13321	NM_199127	91227	Hs.450000	NM_080839	ENSG00000100121	GGTLC2	GGTL4	gamma-glutamyltransferase light chain 2	protein-coding
69.6666-3	chr9	75943446	75943828	+	0.2	NA	intron (NR_120409, intron 2 of 19)	intron (NR_120409, intron 2 of 19)	52964	NM_006200	5125	Hs.368542	NM_006200	ENSG00000099139	PCSK5	PC5|PC6|PC6A|SPC6	proprotein convertase subtilisin/kexin type 5	protein-coding
84.8333	chr6	162626953	162627751	+	0.2	NA	intron (NM_004562, intron 1 of 11)	intron (NM_004562, intron 1 of 11)	-99780	NM_152410	135138	Hs.25791	NM_152410	ENSG00000112530	PACRG	GLUP|HAK005771|PACRG2.1|PARK2CRG	parkin coregulated	protein-coding
47.8-2	chr3	160633125	160633387	+	0.2	NA	Intergenic	Intergenic	-43904	NM_025047	80117	Hs.287702	NM_025047	ENSG00000179674	ARL14	ARF7	ADP ribosylation factor like GTPase 14	protein-coding
36.7-6	chr2	238514908	238515245	+	0.2	NA	intron (NR_037809, intron 2 of 2)	L1MB7|LINE|L1	40423	NR_037809	151171	Hs.652076	NR_037809	ENSG00000225493	LINC01107	-	long intergenic non-protein coding RNA 1107	ncRNA
26.3333-5	chr2	212650129	212650275	+	0.2	NA	Intergenic	L2a|LINE|L2	-111400	NM_005235	2066	Hs.390729	NM_005235	ENSG00000178568	ERBB4	ALS19|HER4|p180erbB4	erb-b2 receptor tyrosine kinase 4	protein-coding
40-3	chr1	107104941	107105319	+	0.2	NA	Intergenic	Intergenic	-34958	NM_014917	22854	Hs.133046	NM_014917	ENSG00000162631	NTNG1	Lmnt1	netrin G1	protein-coding
28.6-15	chr2	208294942	208295184	+	0.2	NA	intron (NM_001178000, intron 7 of 11)	L1MC1|LINE|L1	28796	NM_152671	200576	Hs.744997	NM_015040	ENSG00000115020	PIKFYVE	CFD|FAB1|HEL37|PIP5K|PIP5K3|ZFYVE29	phosphoinositide kinase, FYVE-type zinc finger containing	protein-coding
32.9667-5	chr7	88028918	88029221	+	0.2	NA	intron (NM_001324421, intron 3 of 28)	L1MA3|LINE|L1	94818	NM_021722	53616	Hs.256398	NM_004194	ENSG00000008277	ADAM22	ADAM 22|EIEE61|MDC2	ADAM metallopeptidase domain 22	protein-coding
35.6-16	chr7	109118422	109118898	+	0.2	NA	Intergenic	AluY|SINE|Alu	-234073	NM_001024607	154907	Hs.276325	NM_001024607		C7orf66	-	chromosome 7 open reading frame 66	protein-coding
29.6-8	chr15	68203733	68203951	+	0.2	NA	intron (NM_001286694, intron 1 of 3)	L2a|LINE|L2	2268	NR_104583	91860	Hs.709550	NM_033429	ENSG00000129007	CALML4	NY-BR-20	calmodulin like 4	protein-coding
32.5667-7	chr4	67402880	67403209	+	0.2	NA	Intergenic	L2a|LINE|L2	18956	NR_110747	101927237	Hs.435644	NR_110747	ENSG00000250075	LOC101927237	-	uncharacterized LOC101927237	ncRNA
44.7	chr1	210437572	210438013	+	0.2	NA	intron (NM_001122834, intron 7 of 11)	ERVL-B4-int|LTR|ERVL	108426	NM_001170580	55733	Hs.58650	NM_018194	ENSG00000054392	HHAT	MART2|SKI1|Skn	hedgehog acyltransferase	protein-coding
47.3999	chr8	72113095	72113398	+	0.2	NA	Intergenic	Intergenic	-37662	NM_007332	8989	Hs.716816	NM_007332	ENSG00000104321	TRPA1	ANKTM1|FEPS|FEPS1	transient receptor potential cation channel subfamily A member 1	protein-coding
15.3-12	chr8	80039969	80040094	+	0.2	NA	intron (NM_001025253, intron 7 of 7)	L2b|LINE|L2	-9772	NM_014018	28957	Hs.521124	NM_014018	ENSG00000147586	MRPS28	HSPC007|MRP-S28|MRP-S35|MRPS35	mitochondrial ribosomal protein S28	protein-coding
25-16	chr8	113898665	113898804	+	0.2	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-461795	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
28.4667-6	chr15	75117734	75117981	+	0.2	NA	Intergenic	L1M4|LINE|L1	74571	NM_001301105	60490	Hs.458922	NM_021823	ENSG00000138621	PPCDC	MDS018|PPC-DC|coaC	phosphopantothenoylcysteine decarboxylase	protein-coding
44.8666-3	chr21	14989647	14989957	+	0.2	NA	intron (NM_003489, intron 3 of 3)	intron (NM_003489, intron 3 of 3)	-71134	NR_146322	107987295		NR_146322		LINC02246	-	long intergenic non-protein coding RNA 2246	ncRNA
29.6667	chr1	41835849	41836121	+	0.2	NA	intron (NM_024503, intron 1 of 8)	intron (NM_024503, intron 1 of 8)	82937	NM_001127714	59269	Hs.403972	NM_024503	ENSG00000127124	HIVEP3	KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C	human immunodeficiency virus type I enhancer binding protein 3	protein-coding
44.3-4	chr8	107149193	107149482	+	0.2	NA	Intergenic	Intergenic	187178	NM_001314051	284	Hs.369675	NM_001146	ENSG00000154188	ANGPT1	AGP1|AGPT|ANG1	angiopoietin 1	protein-coding
49.8667-2	chr20	1713560	1714018	+	0.2	NA	Intergenic	L1PBa|LINE|L1	-56010	NM_001039508	55423	Hs.590883	NM_018556	ENSG00000089012	SIRPG	CD172g|SIRP-B2|SIRPB2|SIRPgamma|bA77C3.1	signal regulatory protein gamma	protein-coding
24.3667-10	chr4	145123168	145123308	+	0.2	NA	exon (NM_001040876, exon 15 of 18)	exon (NM_001040876, exon 15 of 18)	-24697	NM_001256708	10393	Hs.480876	NM_014885	ENSG00000164162	ANAPC10	APC10|DOC1	anaphase promoting complex subunit 10	protein-coding
46.1333-8	chr6	123000832	123001262	+	0.2	NA	intron (NM_001010852, intron 2 of 5)	L2a|LINE|L2	4812	NM_001010852	134829	Hs.486361	NM_001010852	ENSG00000146352	CLVS2	C6orf212|C6orf213|RLBP1L2|bA160A10.4	clavesin 2	protein-coding
32.3-6	chr9	10435406	10435647	+	0.2	NA	intron (NM_002839, intron 2 of 45)	MIRc|SINE|MIR	177476	NM_002839	5789	Hs.446083	NM_002839	ENSG00000153707	PTPRD	HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA	protein tyrosine phosphatase receptor type D	protein-coding
38.2666-4	chr3	57350361	57350629	+	0.2	NA	intron (NM_001366028, intron 60 of 73)	L1ME3|LINE|L1	-57810	NM_001142733	142686	Hs.665154	NM_130387	ENSG00000239388	ASB14	-	ankyrin repeat and SOCS box containing 14	protein-coding
36.3-8	chr6	156862817	156863165	+	0.2	NA	intron (NM_017519, intron 2 of 18)	intron (NM_017519, intron 2 of 18)	-83260	NR_039676	100616154		NR_039676	ENSG00000271899	MIR4466	mir-4466	microRNA 4466	ncRNA
21.7333-10	chr5	7916008	7916218	+	0.2	NA	Intergenic	Intergenic	46965	NR_157171	4552	Hs.481551	NM_002454	ENSG00000124275	MTRR	MSR|cblE	5-methyltetrahydrofolate-homocysteine methyltransferase reductase	protein-coding
58.6667-2	chr5	96068505	96068950	+	0.2	NA	intron (NR_130776, intron 1 of 4)	(AT)n|Simple_repeat|Simple_repeat	-10411	NR_030309	693168		NR_030309	ENSG00000207578	MIR583	MIRN583|hsa-mir-583	microRNA 583	ncRNA
31.0667-7	chr3	194248328	194248849	+	0.2	NA	intron (NR_125402, intron 1 of 3)	MER103C|DNA|hAT-Charlie	940	NR_125402	101929337	Hs.548086	NR_125402	ENSG00000238097	LINC02037	-	long intergenic non-protein coding RNA 2037	ncRNA
41.2-6	chr8	99786281	99786969	+	0.2	NA	intron (NM_017890, intron 43 of 61)	intron (NM_017890, intron 43 of 61)	107082	NM_004374	1345	Hs.351875	NM_004374	ENSG00000164919	COX6C	-	cytochrome c oxidase subunit 6C	protein-coding
44.9-5	chr8	115376148	115376641	+	0.2	NA	Intergenic	L2c|LINE|L2	291619	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
55.3-3	chr3	75084481	75085017	+	0.2	NA	Intergenic	Intergenic	-129727	NR_049831	100846999		NR_049831	ENSG00000266780	MIR4444-2	-	microRNA 4444-2	ncRNA
17.3667-5	chr3	73507375	73507500	+	0.2	NA	intron (NM_015009, intron 3 of 9)	AluSq2|SINE|Alu	-13885	NR_121660	101927296	Hs.662049	NR_121660		LOC101927296	-	uncharacterized LOC101927296	ncRNA
21.3333-13	chr9	117545908	117546080	+	0.2	NA	Intergenic	L1MC4|LINE|L1	-102612	NR_109806	101928797	Hs.382317	NR_109806	ENSG00000233569	LOC101928797	-	uncharacterized LOC101928797	ncRNA
60.4001	chr1	187300898	187301260	+	0.2	NA	intron (NR_126347, intron 1 of 3)	L1ME3A|LINE|L1	-142549	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
41.7-5	chr3	54145732	54146023	+	0.2	NA	intron (NM_018398, intron 2 of 37)	L1ME4a|LINE|L1	23325	NM_018398	55799	Hs.656687	NM_018398	ENSG00000157445	CACNA2D3	HSA272268	calcium voltage-gated channel auxiliary subunit alpha2delta 3	protein-coding
26.9667-4	chr3	17259255	17259389	+	0.2	NA	intron (NM_014744, intron 15 of 21)	intron (NM_014744, intron 15 of 21)	326126	NR_037465	100500913		NR_037465	ENSG00000283885	MIR3714	-	microRNA 3714	ncRNA
19.4667-7	chrX	22522236	22522342	+	0.2	NA	intron (NR_073010, intron 4 of 11)	intron (NR_073010, intron 4 of 11)	249376	NM_152577	158506	Hs.132485	NM_152577	ENSG00000175809	CBLL2	CT138|HAKAIL|ZNF645	Cbl proto-oncogene like 2	protein-coding
27.2-6	chr13	97220303	97220553	+	0.2	NA	Intergenic	Intergenic	-1861	NM_001306070	10150	Hs.657347	NM_144778	ENSG00000139793	MBNL2	MBLL|MBLL39|PRO2032	muscleblind like splicing regulator 2	protein-coding
33.4333-2	chr10	65180355	65180762	+	0.2	NA	Intergenic	L1PA15|LINE|L1	-256040	NR_134456	101928887	Hs.463900	NR_134456	ENSG00000224714	LINC02671	-	long intergenic non-protein coding RNA 2671	ncRNA
17.5333-9	chr20	53434915	53435027	+	0.2	NA	intron (NM_173485, intron 2 of 2)	intron (NM_173485, intron 2 of 2)	-117799	NR_110051	101927770		NR_110051		LOC101927770	-	uncharacterized LOC101927770	ncRNA
47.2-6	chr6	61741715	61742019	+	0.2	NA	intron (NR_146874, intron 6 of 13)	intron (NR_146874, intron 6 of 13)	167737	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
29.2-5	chr21	24756152	24756419	+	0.2	NA	Intergenic	L1MEc|LINE|L1	-84265	NR_046198	339622	Hs.616316	NR_046198	ENSG00000226983	LINC01692	-	long intergenic non-protein coding RNA 1692	ncRNA
27.2	chr10	109412194	109412410	+	0.2	NA	Intergenic	Intergenic	510944	NM_001324136	7511	Hs.390623	NM_020383	ENSG00000108039	XPNPEP1	APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1	X-prolyl aminopeptidase 1	protein-coding
28.6667-3	chr10	124871460	124871731	+	0.2	NA	Intergenic	AluSx3|SINE|Alu	69776	NM_032182	23172	Hs.280695	NM_032182	ENSG00000165660	ABRAXAS2	ABRO1|FAM175B|KIAA0157	abraxas 2, BRISC complex subunit	protein-coding
54.7333	chr20	49089741	49090488	+	0.2	NA	intron (NM_001362762, intron 19 of 24)	AluJo|SINE|Alu	43802	NM_001316	1434	Hs.90073	NM_001316	ENSG00000124207	CSE1L	CAS|CSE1|XPO2	chromosome segregation 1 like	protein-coding
50.4001	chr10	56264904	56265341	+	0.2	NA	Intergenic	L1ME4b|LINE|L1	96137	NM_007057	11130	Hs.591363	NM_007057	ENSG00000122952	ZWINT	HZwint-1|KNTC2AP|SIP30|ZWINT1	ZW10 interacting kinetochore protein	protein-coding
53.5	chr12	110149846	110150245	+	0.2	NA	intron (NM_031473, intron 10 of 11)	LTR1A2|LTR|ERV1	25688	NR_144949	28981	Hs.528382	NM_014055	ENSG00000122970	IFT81	CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19	intraflagellar transport 81	protein-coding
25.3333-17	chrX	97024072	97024320	+	0.2	NA	intron (NM_007309, intron 17 of 26)	intron (NM_007309, intron 17 of 26)	140288	NM_013347	29935	Hs.659349	NM_013347	ENSG00000204086	RPA4	HSU24186	replication protein A4	protein-coding
31.3-10	chr5	89902996	89903293	+	0.2	NA	Intergenic	Intergenic	113576	NR_037433	100500825		NR_037433	ENSG00000264342	MIR3660	mir-3660	microRNA 3660	ncRNA
39-10	chr9	89208417	89208767	+	0.2	NA	Intergenic	THE1C|LTR|ERVL-MaLR	-29774	NM_016848	53358	Hs.292737	NM_016848	ENSG00000148082	SHC3	N-Shc|NSHC|RAI|SHCC	SHC adaptor protein 3	protein-coding
47.2-4	chr20	25237672	25237957	+	0.2	NA	Intergenic	Intergenic	-10271	NM_002862	5834	Hs.368157	NM_002862	ENSG00000100994	PYGB	GPBB	glycogen phosphorylase B	protein-coding
31.9667-4	chr9	119406511	119406711	+	0.2	NA	Intergenic	Intergenic	-37176	NM_014618	1620	Hs.532316	NM_014618	ENSG00000078725	BRINP1	DBC1|DBCCR1|FAM5A	BMP/retinoic acid inducible neural specific 1	protein-coding
21.3334	chr19	30563061	30563222	+	0.2	NA	intron (NM_001352260, intron 4 of 5)	intron (NM_001352260, intron 4 of 5)	190757	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding
32.8666	chr1	107908498	107908703	+	0.2	NA	intron (NM_006113, intron 1 of 26)	intron (NM_006113, intron 1 of 26)	11377	NR_107006	102465839		NR_107006	ENSG00000275455	MIR7852	hsa-mir-7852	microRNA 7852	ncRNA
52.8-4	chr7	141076939	141077310	+	0.2	NA	intron (NM_001195278, intron 1 of 3)	intron (NM_001195278, intron 1 of 3)	3060	NM_001195278	100507421	Hs.283851	NM_001195278	ENSG00000261115	TMEM178B	-	transmembrane protein 178B	protein-coding
44.1334	chr7	24973429	24973994	+	0.2	NA	intron (NM_015550, intron 1 of 22)	intron (NM_015550, intron 1 of 22)	6467	NM_015550	26031	Hs.520259	NM_015550	ENSG00000070882	OSBPL3	ORP-3|ORP3|OSBP3	oxysterol binding protein like 3	protein-coding
27-5	chr12	47284368	47284505	+	0.2	NA	Intergenic	MER4D1|LTR|ERV1	22963	NR_135024	105369747	Hs.88617	NR_135024		LOC105369747	-	uncharacterized LOC105369747	ncRNA
36.6-9	chr6	152741076	152741418	+	0.2	NA	Intergenic	Intergenic	-9550	NM_003381	7432	Hs.53973	NM_003381	ENSG00000146469	VIP	PHM27	vasoactive intestinal peptide	protein-coding
63.3-2	chr14	76195367	76195913	+	0.2	NA	intron (NM_001322028, intron 8 of 9)	intron (NM_001322028, intron 8 of 9)	41286	NM_017972	55668	Hs.410231	NM_017926	ENSG00000089916	GPATCH2L	C14orf118	G-patch domain containing 2 like	protein-coding
43.5-4	chr7	39285321	39285674	+	0.2	NA	intron (NM_001370959, intron 4 of 9)	intron (NM_001370959, intron 4 of 9)	43637	NR_145730	109616963		NR_145730	ENSG00000206947	SNORA20B	-	small nucleolar RNA, H/ACA box 20B	snoRNA
51.9667-2	chr12	128218239	128218883	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	-48842	NM_001136103	92293	Hs.49599	NM_001136103	ENSG00000181234	TMEM132C	PPP1R152	transmembrane protein 132C	protein-coding
27.5333-3	chr10	60201787	60202027	+	0.2	NA	intron (NM_001204403, intron 13 of 43)	AluSz6|SINE|Alu	-60891	NM_001149	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding
29.6-14	chr8	141199274	141199571	+	0.2	NA	Intergenic	L1MEc|LINE|L1	29152	NM_001286648	57210	Hs.372492	NM_001080431	ENSG00000022567	SLC45A4	-	solute carrier family 45 member 4	protein-coding
64.6332-2	chr6	135030293	135031079	+	0.2	NA	intron (NM_001363686, intron 4 of 18)	intron (NM_001363686, intron 4 of 18)	24136	NM_006620	10767	Hs.378532	NM_006620	ENSG00000112339	HBS1L	EF-1a|ERFS|HBS1|HSPC276|eRF3c	HBS1 like translational GTPase	protein-coding
30.4-13	chr9	34354806	34355292	+	0.2	NA	Intergenic	L1MB7|LINE|L1	21849	NM_020702	57462	Hs.522083	NM_020702	ENSG00000164976	MYORG	IBGC7|KIAA1161|NET37	myogenesis regulating glycosidase (putative)	protein-coding
46.7	chr7	114110799	114111202	+	0.2	NA	intron (NR_033766, intron 1 of 19)	intron (NR_033766, intron 1 of 19)	24673	NR_033766	93986	Hs.282787	NM_014491	ENSG00000128573	FOXP2	CAGH44|SPCH1|TNRC10	forkhead box P2	protein-coding
42.2666	chr12	60610091	60610353	+	0.2	NA	Intergenic	Intergenic	920852	NR_073056	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
44.9999	chr3	136596271	136596547	+	0.2	NA	intron (NM_005862, intron 4 of 33)	Tigger1|DNA|TcMar-Tigger	155969	NM_005862	10274	Hs.412586	NM_005862	ENSG00000118007	STAG1	MRD47|SA1|SCC3A	stromal antigen 1	protein-coding
34.8	chr1	43730839	43731142	+	0.2	NA	intron (NM_001270459, intron 1 of 11)	L1ME3G|LINE|L1	-3647	NR_125986	101929592		NR_125986	ENSG00000229444	LOC101929592	-	uncharacterized LOC101929592	ncRNA
49.9-2	chr2	64714562	64714811	+	0.2	NA	Intergenic	Intergenic	-60773	NM_014755	9792	Hs.591569	NM_014755	ENSG00000179833	SERTAD2	Sei-2|TRIP-Br2|TRIPBR2	SERTA domain containing 2	protein-coding
32.8-12	chr9	12496793	12497176	+	0.2	NA	Intergenic	L1ME1|LINE|L1	-196401	NM_000550	7306	Hs.270279	NM_000550	ENSG00000107165	TYRP1	CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN	tyrosinase related protein 1	protein-coding
57.9001	chr13	109596256	109596714	+	0.2	NA	Intergenic	L1MB7|LINE|L1	-131789	NR_103846	101409253	Hs.578072	NR_103846	ENSG00000234854	LINC00676	-	long intergenic non-protein coding RNA 676	ncRNA
26.5-9	chr7	7788973	7789184	+	0.2	NA	intron (NM_001302350, intron 3 of 4)	intron (NM_001302350, intron 3 of 4)	-70471	NM_002947	6119	Hs.487540	NM_002947	ENSG00000106399	RPA3	REPA3|RP-A p14	replication protein A3	protein-coding
37.5	chr1	171158956	171159236	+	0.2	NA	intron (NR_002601, intron 6 of 6)	MER41B|LTR|ERV1	21356	NR_002601	388714	Hs.448988	NR_002601	ENSG00000117507	FMO6P	FMO6	flavin containing dimethylaniline monoxygenase 6, pseudogene	pseudo
38.2-5	chr4	101870684	101871017	+	0.2	NA	intron (NM_017935, intron 5 of 16)	intron (NM_017935, intron 5 of 16)	57008	NM_001083907	55024	Hs.480400	NM_017935	ENSG00000153064	BANK1	BANK	B cell scaffold protein with ankyrin repeats 1	protein-coding
51.4666-2	chr10	96884074	96884491	+	0.2	NA	intron (NM_001170766, intron 2 of 8)	Charlie1a|DNA|hAT-Charlie	51337	NM_032440	84458	Hs.427927	NM_015652	ENSG00000196233	LCOR	C10orf12|MLR2	ligand dependent nuclear receptor corepressor	protein-coding
36.8667-5	chr2	96463141	96463571	+	0.2	NA	Intergenic	FLAM_C|SINE|Alu	42001	NM_001285486	93082	Hs.149219	NM_001080535	ENSG00000163121	NEURL3	LINCR|RNF132	neuralized E3 ubiquitin protein ligase 3	protein-coding
51.3333-2	chr20	32208175	32208625	+	0.2	NA	promoter-TSS (NM_002657)	promoter-TSS (NM_002657)	520	NM_015352	23509	Hs.472409	NM_015352	ENSG00000101346	POFUT1	DDD2|FUT12|O-FUT|O-Fuc-T|O-FucT-1|OFUCT1	protein O-fucosyltransferase 1	protein-coding
30-11	chr3	19547192	19547485	+	0.2	NA	Intergenic	Intergenic	-232407	NR_039954	100616291		NR_039954	ENSG00000271898	MIR4791	mir-4791	microRNA 4791	ncRNA
26.2-20	chr7	2408770	2409051	+	0.2	NA	intron (NM_018641, intron 1 of 1)	HAL1|LINE|L1	5299	NM_018641	55501	Hs.288853	NM_018641	ENSG00000136213	CHST12	C4S-2|C4ST-2|C4ST2	carbohydrate sulfotransferase 12	protein-coding
34.5333	chr1	168098904	168099217	+	0.2	NA	intron (NM_001267614, intron 1 of 4)	MIRb|SINE|MIR	37376	NM_001267612	23432	Hs.271809	NM_007369	ENSG00000143147	GPR161	RE2	G protein-coupled receptor 161	protein-coding
51.1666-2	chr8	129416541	129416943	+	0.2	NA	intron (NR_130920, intron 1 of 3)	intron (NR_130920, intron 1 of 3)	67400	NR_037457	100500839		NR_037457	ENSG00000263763	MIR3686	-	microRNA 3686	ncRNA
32.9334-3	chr14	64625106	64625301	+	0.2	NA	Intergenic	Intergenic	75242	NM_172365	145376	Hs.144696	NM_172365	ENSG00000165807	PPP1R36	C14orf50	protein phosphatase 1 regulatory subunit 36	protein-coding
30-13	chr4	87633255	87633417	+	0.2	NA	Intergenic	MIRb|SINE|MIR	-16944	NM_004407	1758	Hs.652366	NM_004407	ENSG00000152592	DMP1	ARHP|ARHR|DMP-1	dentin matrix acidic phosphoprotein 1	protein-coding
25.4-10	chr2	169554074	169554272	+	0.2	NA	intron (NM_024622, intron 7 of 14)	AluJo|SINE|Alu	19692	NM_024622	79675	Hs.529276	NM_024622	ENSG00000138399	FASTKD1	-	FAST kinase domains 1	protein-coding
20.6666-4	chr2	5083918	5084095	+	0.2	NA	Intergenic	Intergenic	-427784	NR_034134	727982	Hs.444391	NR_034134	ENSG00000231532	LINC01249	-	long intergenic non-protein coding RNA 1249	ncRNA
30.2667-8	chr8	138544827	138545063	+	0.2	NA	Intergenic	MIRb|SINE|MIR	-47215	NM_001362965	51059	Hs.126024	NM_015912	ENSG00000147724	FAM135B	C8ORFK32	family with sequence similarity 135 member B	protein-coding
30.6666	chr4	164629964	164630163	+	0.2	NA	Intergenic	Intergenic	-124068	NM_001352885	100505989	Hs.328236	NM_001352885	ENSG00000248771	SMIM31	LINC01207	small integral membrane protein 31	protein-coding
33.5-5	chr5	179253214	179253426	+	0.2	NA	intron (NM_014244, intron 3 of 21)	L1MEi|LINE|L1	92141	NM_014244	9509	Hs.23871	NM_014244	ENSG00000087116	ADAMTS2	ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI	ADAM metallopeptidase with thrombospondin type 1 motif 2	protein-coding
45.1333	chr15	61123837	61124363	+	0.2	NA	intron (NM_134261, intron 1 of 10)	intron (NM_134261, intron 1 of 10)	105202	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding
63.3	chr11	88374931	88375348	+	0.2	NA	Intergenic	L2|LINE|L2	-37403	NM_001814	1075	Hs.128065	NM_001814	ENSG00000109861	CTSC	CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS	cathepsin C	protein-coding
34.9-2	chr12	15678297	15678563	+	0.2	NA	intron (NM_004447, intron 3 of 20)	intron (NM_004447, intron 3 of 20)	110958	NM_004447	2059	Hs.591160	NM_004447	ENSG00000151491	EPS8	DFNB102	epidermal growth factor receptor pathway substrate 8	protein-coding
36.4-11	chr6	12259274	12259469	+	0.2	NA	Intergenic	(AATTAAT)n|Simple_repeat|Simple_repeat	-30990	NM_001955	1906	Hs.511899	NM_001955	ENSG00000078401	EDN1	ARCND3|ET1|HDLCQ7|PPET1|QME	endothelin 1	protein-coding
28.6-25	chr9	99972918	99973125	+	0.2	NA	3' UTR (NM_017919, exon 8 of 8)	3' UTR (NM_017919, exon 8 of 8)	66367	NM_017919	55014	Hs.704031	NM_017919	ENSG00000136874	STX17	-	syntaxin 17	protein-coding
55.5334-2	chr6	61739780	61740083	+	0.2	NA	intron (NR_146874, intron 6 of 13)	MER63D|DNA|hAT-Blackjack	165801	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
50.1333-4	chr4	156050721	156051264	+	0.2	NA	Intergenic	Intergenic	-97126	NM_001334	1519	Hs.75262	NM_001334	ENSG00000256043	CTSO	CTSO1	cathepsin O	protein-coding
56.2668	chr2	227161233	227161630	+	0.2	NA	intron (NM_000092, intron 1 of 47)	intron (NM_000092, intron 1 of 47)	3128	NM_000092	1286	Hs.591645	NM_000092	ENSG00000081052	COL4A4	ATS2|BFH|CA44	collagen type IV alpha 4 chain	protein-coding
36.3-4	chr14	29609971	29610274	+	0.2	NA	intron (NM_001330069, intron 14 of 18)	intron (NM_001330069, intron 14 of 18)	316974	NM_001348390	5587	Hs.508999	NM_002742	ENSG00000184304	PRKD1	CHDED|PKC-MU|PKCM|PKD|PRKCM	protein kinase D1	protein-coding
55.2-3	chr6	136322676	136322991	+	0.2	NA	Intergenic	AluJo|SINE|Alu	-32982	NM_001077440	9774	Hs.486542	NM_014739	ENSG00000029363	BCLAF1	BTF|bK211L9.1	BCL2 associated transcription factor 1	protein-coding
30.2-16	chr9	93393613	93393853	+	0.2	NA	Intergenic	HERVL18-int|LTR|ERVL	-47319	NM_001098808	445577	Hs.575636	NM_001098808	ENSG00000204352	C9orf129	bA165J3.3	chromosome 9 open reading frame 129	protein-coding
49.7999	chr1	182410673	182411135	+	0.2	NA	intron (NR_034131, intron 3 of 3)	MER3|DNA|hAT-Charlie	3283	NR_034131	388719	Hs.508989	NM_001010899	ENSG00000203729	LINC00272	C1orf120|NCRNA00272	long intergenic non-protein coding RNA 272	ncRNA
41.7334-2	chr3	96826696	96827067	+	0.2	NA	intron (NM_001080448, intron 1 of 17)	intron (NM_001080448, intron 1 of 17)	12287	NM_001278301	285220	Hs.272208	NM_173655	ENSG00000080224	EPHA6	EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066	EPH receptor A6	protein-coding
31.8-11	chr5	22794667	22794916	+	0.2	NA	intron (NM_004061, intron 1 of 14)	MLT1D|LTR|ERVL-MaLR	58553	NM_001364106	1010	Hs.113684	NM_004061	ENSG00000154162	CDH12	CDHB	cadherin 12	protein-coding
51.6667-2	chr8	118911081	118911475	+	0.2	NA	Intergenic	Intergenic	40607	NM_002546	4982	Hs.81791	NM_002546	ENSG00000164761	TNFRSF11B	OCIF|OPG|PDB5|TR1	TNF receptor superfamily member 11b	protein-coding
31.6667-5	chr16	19190914	19191422	+	0.2	NA	intron (NM_001308157, intron 5 of 7)	L1ME2z|LINE|L1	18833	NM_001308157	51760	Hs.258326	NM_016524	ENSG00000103528	SYT17	sytXVII	synaptotagmin 17	protein-coding
43.4-6	chr8	103320736	103321069	+	0.2	NA	intron (NM_003506, intron 3 of 6)	L2a|LINE|L2	11924	NR_145795	109623480		NR_145795		SNORD173	-	small nucleolar RNA, C/D box 173	snoRNA
30.3-2	chr17	69607598	69607888	+	0.2	NA	intron (NR_109972, intron 2 of 4)	intron (NR_109972, intron 2 of 4)	13756	NR_109971	101928122	Hs.579342	NR_109971	ENSG00000227517	LINC01483	-	long intergenic non-protein coding RNA 1483	ncRNA
45.7667-3	chr7	6477814	6478281	+	0.2	NA	intron (NM_001100603, intron 1 of 3)	L1ME3G|LINE|L1	6105	NM_006854	11014	Hs.654552	NM_006854	ENSG00000136240	KDELR2	ELP-1|ERD2.2	KDEL endoplasmic reticulum protein retention receptor 2	protein-coding
64.2001	chr3	56044203	56044805	+	0.2	NA	intron (NR_132749, intron 7 of 17)	intron (NR_132749, intron 7 of 17)	-191910	NR_037502	100500875		NR_037502	ENSG00000264013	MIR3938	-	microRNA 3938	ncRNA
46.5-3	chr17	35466567	35466986	+	0.2	NA	Intergenic	HERVL74-int|LTR|ERVL	-18010	NM_144682	146857	Hs.462833	NM_144682	ENSG00000154760	SLFN13	SLFN10|hSLFN13	schlafen family member 13	protein-coding
53.8666	chr3	175699962	175700309	+	0.2	NA	intron (NM_207015, intron 11 of 13)	intron (NM_207015, intron 11 of 13)	76198	NR_046714	100874245	Hs.614827	NR_046714		NAALADL2-AS1	-	NAALADL2 antisense RNA 1	ncRNA
51.3334-2	chr8	79181269	79181603	+	0.2	NA	Intergenic	THE1B-int|LTR|ERVL-MaLR	-150752	NR_162137	113219456		NR_162137		MIR12123	-	microRNA 12123	ncRNA
72.8	chr17	7346683	7347192	+	0.2	NA	intron (NM_014716, intron 13 of 21)	intron (NM_014716, intron 13 of 21)	-4952	NM_001002914	147040	Hs.592112	NM_001002914	ENSG00000213859	KCTD11	C17orf36|KCASH1|REN|REN/KCTD11	potassium channel tetramerization domain containing 11	protein-coding
105.733	chr8	83975111	83976058	+	0.2	NA	Intergenic	Intergenic	-207203	NM_001354325	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
61.6666	chr12	1097172	1097722	+	0.2	NA	intron (NR_027948, intron 3 of 19)	L1MEc|LINE|L1	69699	NM_001301248	23085	Hs.601216	NM_178039	ENSG00000082805	ERC1	Cast2|ELKS|ERC-1|RAB6IP2	ELKS/RAB6-interacting/CAST family member 1	protein-coding
56.6666	chr10	88150332	88150850	+	0.2	NA	Intergenic	Tigger7|DNA|TcMar-Tigger	286966	NM_000314	5728	Hs.500466	NM_000314	ENSG00000171862	PTEN	10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1	phosphatase and tensin homolog	protein-coding
38.7667-2	chr5	64334657	64334897	+	0.2	NA	3' UTR (NM_001323292, exon 7 of 7)	3' UTR (NM_001323292, exon 7 of 7)	168934	NM_001323291	285671	Hs.657843	NM_178532	ENSG00000164197	RNF180	RINES	ring finger protein 180	protein-coding
47.6-6	chr8	123029454	123029820	+	0.2	NA	intron (NM_001330601, intron 1 of 6)	intron (NM_001330601, intron 1 of 6)	-3865	NM_001363963	79139	Hs.241576	NM_024295	ENSG00000136986	DERL1	DER-1|DER1|derlin-1	derlin 1	protein-coding
29.3-4	chr16	73128437	73128705	+	0.2	NA	intron (NM_207385, intron 3 of 3)	intron (NM_207385, intron 3 of 3)	15876	NM_207385	388289	Hs.371893	NM_207385		C16orf47	-	chromosome 16 open reading frame 47	protein-coding
27.4-4	chr12	11535927	11536084	+	0.2	NA	Intergenic	Intergenic	-12025	NR_033890	338817	Hs.733066	NR_033890	ENSG00000247157	LINC01252	-	long intergenic non-protein coding RNA 1252	ncRNA
41.4-5	chr6	73651916	73652169	+	0.2	NA	intron (NM_012434, intron 1 of 10)	L1MC5|LINE|L1	1950	NM_012434	26503	Hs.597422	NM_012434	ENSG00000119899	SLC17A5	AST|ISSD|NSD|SD|SIALIN|SIASD|SLD	solute carrier family 17 member 5	protein-coding
28.3-4	chr22	35172209	35172430	+	0.2	NA	intron (NR_126356, intron 3 of 5)	intron (NR_126356, intron 3 of 5)	58737	NR_126356	104310353	Hs.581009	NR_126356	ENSG00000233080	LINC01399	-	long intergenic non-protein coding RNA 1399	ncRNA
40.2667-2	chr12	39062500	39062957	+	0.2	NA	Intergenic	MamRep38|DNA|hAT	-157137	NM_153634	144402	Hs.40910	NM_153634	ENSG00000139117	CPNE8	-	copine 8	protein-coding
63.7333-2	chr3	124958862	124959366	+	0.2	NA	Intergenic	HAL1b|LINE|L1	-24363	NM_033049	56667	Hs.5940	NM_033049	ENSG00000173702	MUC13	DRCC1|MUC-13	mucin 13, cell surface associated	protein-coding
46.1333-4	chr18	61400268	61400663	+	0.2	NA	intron (NM_031891, intron 1 of 11)	intron (NM_031891, intron 1 of 11)	67035	NM_031891	28316	Hs.671510	NM_031891	ENSG00000101542	CDH20	CDH7L3|Cdh7	cadherin 20	protein-coding
35.3333-5	chr14	31875977	31876258	+	0.2	NA	Intergenic	Intergenic	-68736	NR_146544	105370439		NR_146544	ENSG00000258474	LINC02313	-	long intergenic non-protein coding RNA 2313	ncRNA
54.9-3	chr2	190638475	190638885	+	0.2	NA	Intergenic	Intergenic	-10215	NM_001321313	4664	Hs.107474	NM_005966	ENSG00000138386	NAB1	-	NGFI-A binding protein 1	protein-coding
91.4001	chr3	109936246	109937169	+	0.2	NA	Intergenic	Intergenic	333879	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
40.8-6	chr4	34503986	34504312	+	0.2	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-234402	NR_147183	105374394	Hs.570782	NR_147183	ENSG00000248685	LINC02484	-	long intergenic non-protein coding RNA 2484	ncRNA
54.1999-2	chr5	23550268	23550618	+	0.2	NA	Intergenic	Intergenic	42788	NM_001310214	56979	Hs.283096	NM_020227	ENSG00000164256	PRDM9	KMT8B|MEISETZ|MSBP3|PFM6|ZNF899	PR/SET domain 9	protein-coding
19.3333-8	chr20	10359150	10359339	+	0.2	NA	Intergenic	L1PA7|LINE|L1	72681	NM_018848	8195	Hs.472119	NM_018848	ENSG00000125863	MKKS	BBS6|HMCS|KMS|MKS	McKusick-Kaufman syndrome	protein-coding
37.9667-7	chr5	24207137	24207530	+	0.2	NA	Intergenic	MER77|LTR|ERVL	255985	NR_131245	439936	Hs.638078	NR_131245	ENSG00000248874	C5orf17	-	chromosome 5 open reading frame 17 (putative)	ncRNA
28.4666-4	chr2	40282415	40282637	+	0.2	NA	intron (NM_001351483, intron 2 of 8)	intron (NM_001351483, intron 2 of 8)	147778	NM_001112800	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding
32.5667-8	chr4	104816867	104817110	+	0.2	NA	Intergenic	L1ME3|LINE|L1	-322094	NR_132741	80319	Hs.12248	NM_025212	ENSG00000168772	CXXC4	IDAX	CXXC finger protein 4	protein-coding
45.7333-5	chr17	35314252	35314635	+	0.2	NA	Intergenic	L1PA15-16|LINE|L1	59178	NM_152270	91607	Hs.745059	NM_152270	ENSG00000172716	SLFN11	SLFN8/9	schlafen family member 11	protein-coding
30.5-7	chr12	130105576	130105763	+	0.2	NA	Intergenic	L1MC5|LINE|L1	34334	NR_146538	105370078		NR_146538		LINC02419	-	long intergenic non-protein coding RNA 2419	ncRNA
57.5333-2	chr14	62463648	62464112	+	0.2	NA	Intergenic	Intergenic	-323907	NR_104063	101954204	Hs.607093	NR_104063	ENSG00000259142	LINC00644	-	long intergenic non-protein coding RNA 644	ncRNA
15.2667-5	chr16	1748540	1748636	+	0.2	NA	intron (NM_001040439, intron 7 of 30)	intron (NM_001040439, intron 7 of 30)	13603	NR_036138	100423012		NR_036138	ENSG00000265820	MIR3177	mir-3177	microRNA 3177	ncRNA
38.7333-6	chr2	88618313	88618649	+	0.2	NA	intron (NM_004836, intron 1 of 16)	intron (NM_004836, intron 1 of 16)	6448	NM_001313915	9451	Hs.591589	NM_004836	ENSG00000172071	EIF2AK3	PEK|PERK|WRS	eukaryotic translation initiation factor 2 alpha kinase 3	protein-coding
26.2667-6	chr8	88093778	88094074	+	0.2	NA	intron (NM_005941, intron 6 of 9)	intron (NM_005941, intron 6 of 9)	-219911	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
45.5	chr2	74140920	74141343	+	0.2	NA	intron (NM_001035505, intron 2 of 2)	intron (NM_001035505, intron 2 of 2)	6781	NM_001035505	388962	Hs.61472	NM_212552	ENSG00000163170	BOLA3	MMDS2	bolA family member 3	protein-coding
30.9-3	chr12	12185672	12185905	+	0.2	NA	intron (NM_002336, intron 4 of 22).2	intron (NM_002336, intron 4 of 22).2	73836	NR_036263	100422872		NR_036263	ENSG00000283429	MIR1244-3	-	microRNA 1244-3	ncRNA
68.3999	chr15	39398248	39398679	+	0.2	NA	Intergenic	Intergenic	147794	NR_144507	400360	Hs.376109	NM_207445	ENSG00000175746	C15orf54	-	chromosome 15 open reading frame 54 (putative)	ncRNA
39.3-2	chr14	45921918	45922279	+	0.2	NA	Intergenic	L1ME1|LINE|L1	-142061	NR_102702	100506412	Hs.207545	NR_102699	ENSG00000258700	LINC00871	-	long intergenic non-protein coding RNA 871	ncRNA
33.7-9	chr2	47096122	47096481	+	0.2	NA	intron (NM_001163561, intron 5 of 6)	L2c|LINE|L2	59007	NM_001163561	285051	Hs.531575	NM_173649	ENSG00000239605	STPG4	C2orf61|GSE	sperm-tail PG-rich repeat containing 4	protein-coding
26.2-18	chr5	9676685	9676855	+	0.2	NA	intron (NR_027112, intron 9 of 12)	L1MC3|LINE|L1	-46419	NM_019599	50834	Hs.567492	NM_019599	ENSG00000169777	TAS2R1	T2R1|TRB7	taste 2 receptor member 1	protein-coding
40.9333-2	chr16	60344222	60344450	+	0.2	NA	Intergenic	Intergenic	15457	NM_001282301	729159		NM_001282301		NPAP1L	-	nuclear pore associated protein 1 like	protein-coding
23.3-3	chr12	126964211	126964426	+	0.2	NA	intron (NR_104646, intron 4 of 6)	L1M3|LINE|L1	-89628	NR_033970	440117	Hs.127100	NR_033970	ENSG00000249873	LINC02372	-	long intergenic non-protein coding RNA 2372	ncRNA
62.2667	chr12	107603947	107604445	+	0.2	NA	intron (NM_001018072, intron 4 of 16)	L1MA8|LINE|L1	23322	NM_001017523	121551	Hs.271272	NM_152322	ENSG00000151136	BTBD11	ABTB2B	BTB domain containing 11	protein-coding
19.2-13	chr7	27919854	27919978	+	0.2	NA	intron (NM_175061, intron 2 of 4)	Tigger16b|DNA|TcMar-Tigger	179821	NM_001362795	8887	Hs.34576	NM_006024	ENSG00000106052	TAX1BP1	CALCOCO3|T6BP|TXBP151	Tax1 binding protein 1	protein-coding
39.6334	chr5	27956321	27956553	+	0.2	NA	Intergenic	Intergenic	331228	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
32.2667-7	chr9	90247770	90248143	+	0.2	NA	Intergenic	L1MEi|LINE|L1	185533	NR_109795	101927873	Hs.598482	NR_109795	ENSG00000231107	LINC01508	-	long intergenic non-protein coding RNA 1508	ncRNA
33.2334-4	chr4	143024144	143024407	+	0.2	NA	Intergenic	L1M1|LINE|L1	160586	NR_136203	105377623		NR_136203	ENSG00000250326	LOC105377623	-	uncharacterized LOC105377623	ncRNA
40.2-2	chr13	54900223	54900577	+	0.2	NA	Intergenic	Intergenic	-274054	NR_049804	100846996		NR_049804	ENSG00000264387	MIR5007	-	microRNA 5007	ncRNA
18.3-6	chr4	25168145	25168305	+	0.2	NA	intron (NR_037934, intron 1 of 1)	MER5A1|DNA|hAT-Charlie	7553	NR_037934	285540	Hs.732278	NR_037934		SEPSECS-AS1	-	SEPSECS antisense RNA 1 (head to head)	ncRNA
17.9333-14	chr6	16575118	16575225	+	0.2	NA	intron (NM_000332, intron 5 of 8)	L1MC4a|LINE|L1	185013	NR_152113	6310	Hs.434961	NM_000332	ENSG00000124788	ATXN1	ATX1|D6S504E|SCA1	ataxin 1	protein-coding
60.3	chr20	34416237	34416717	+	0.2	NA	intron (NM_031483, intron 6 of 24)	intron (NM_031483, intron 6 of 24)	-49848	NR_030374	693229		NR_030374	ENSG00000207997	MIR644A	MIR644|MIRN644|hsa-mir-644|hsa-mir-644a	microRNA 644a	ncRNA
25.9667-2	chr12	114530193	114530337	+	0.2	NA	Intergenic	Intergenic	-121823	NM_000192	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box transcription factor 5	protein-coding
30.5-3	chr1	171785866	171786167	+	0.2	NA	exon (NM_015935, exon 3 of 8)	exon (NM_015935, exon 3 of 8)	4356	NM_001007239	51603	Hs.494705	NM_014955	ENSG00000010165	EEF1AKNMT	5630401D24Rik|CGI-01|DFNB26|DFNB26M|KIAA0859|METTL13|feat	eEF1A lysine and N-terminal methyltransferase	protein-coding
71.3-2	chr2	196419526	196420140	+	0.2	NA	intron (NM_020760, intron 2 of 28)	MIRb|SINE|MIR	-57656	NM_001304840	57520	Hs.633212	NM_020760	ENSG00000138411	HECW2	NDHSAL|NEDL2	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	protein-coding
42.6666-2	chr16	12270695	12271102	+	0.2	NA	intron (NM_032167, intron 14 of 20)	AluSx|SINE|Alu	294164	NM_032167	92017	Hs.458401	NM_032167	ENSG00000048471	SNX29	A-388D4.1|RUNDC2A	sorting nexin 29	protein-coding
36.9667-3	chr3	19759012	19759508	+	0.2	NA	Intergenic	Intergenic	174957	NM_144715	151651	Hs.733920	NM_144715	ENSG00000163576	EFHB	CFAP21	EF-hand domain family member B	protein-coding
33.7333-5	chr2	30751537	30751983	+	0.2	NA	intron (NM_144575, intron 10 of 22)	intron (NM_144575, intron 10 of 22)	55686	NM_144575	92291	Hs.660911	NM_144575	ENSG00000162949	CAPN13	-	calpain 13	protein-coding
22.5333-2	chr10	8500122	8500234	+	0.2	NA	Intergenic	(CTCC)n|Simple_repeat|Simple_repeat	94213	NR_134492	105376398	Hs.63158	NR_134492		LOC105376398	-	uncharacterized LOC105376398	ncRNA
37.5-2	chr6	8759299	8759568	+	0.2	NA	intron (NR_038980, intron 3 of 4)	intron (NR_038980, intron 3 of 4)	107224	NR_004855	728655	Hs.214343	NR_004855		HULC	HCCAT1|LINC00078|NCRNA00078	hepatocellular carcinoma up-regulated long non-coding RNA	ncRNA
48-3	chr3	118525065	118525461	+	0.2	NA	intron (NR_135547, intron 3 of 3)	LTR1F1|LTR|ERV1	-116505	NR_135573	101926968	Hs.518185	NR_135573		LOC101926968	-	uncharacterized LOC101926968	ncRNA
29.8-10	chr7	93353743	93354193	+	0.2	NA	intron (NM_001257998, intron 27 of 28)	intron (NM_001257998, intron 27 of 28)	121602	NM_017667	55610	Hs.202424	NM_017667	ENSG00000004766	VPS50	CCDC132|VPS54L	VPS50 subunit of EARP/GARPII complex	protein-coding
21.9333-5	chr1	235669095	235669360	+	0.2	NA	intron (NM_000081, intron 50 of 52)	MER21C|LTR|ERVL	-18473	NM_001098721	2786	Hs.159711	NM_004485	ENSG00000168243	GNG4	-	G protein subunit gamma 4	protein-coding
37.8-2	chr12	12878088	12878404	+	0.2	NA	Intergenic	MIRc|SINE|MIR	2769	NR_003932	387841	Hs.631728	NR_003932	ENSG00000234498	RPL13AP20	RPL13A_9_1211	ribosomal protein L13a pseudogene 20	pseudo
64.1667	chr10	32733521	32733932	+	0.2	NA	intron (NM_001321115, intron 29 of 43)	L1M5|LINE|L1	167746	NR_132768	106633814		NR_132768		SNORA86	-	small nucleolar RNA, H/ACA box 86	snoRNA
24.8667-11	chr9	104051011	104051171	+	0.2	NA	Intergenic	Intergenic	41383	NR_121580	101928550	Hs.144722	NR_121580	ENSG00000270332	SMC2-AS1	-	SMC2 antisense RNA 1 (head to head)	ncRNA
48.1-3	chr2	186366894	186367256	+	0.2	NA	Intergenic	Intergenic	-119185	NM_018471	55854	Hs.741180	NM_018471	ENSG00000065548	ZC3H15	HT010|LEREPO4|MSTP012	zinc finger CCCH-type containing 15	protein-coding
31.1333-8	chr3	154789215	154789613	+	0.2	NA	Intergenic	L2|LINE|L2	-234710	NM_001354642	4311	Hs.307734	NM_000902	ENSG00000196549	MME	CALLA|CD10|CMT2T|NEP|SCA43|SFE	membrane metalloendopeptidase	protein-coding
38.4-3	chr18	6389348	6389828	+	0.2	NA	intron (NM_001365765, intron 1 of 18)	L1PB3|LINE|L1	-15163	NR_036205	100422840		NR_036205	ENSG00000283532	MIR4317	-	microRNA 4317	ncRNA
41.9667	chr20	45644132	45644621	+	0.2	NA	Intergenic	AluJb|SINE|Alu	-13092	NM_147198	259240	Hs.249828	NM_147198	ENSG00000180205	WFDC9	WAP9|dJ688G8.2	WAP four-disulfide core domain 9	protein-coding
48.5-2	chr21	16111165	16111580	+	0.2	NA	intron (NR_111005, intron 1 of 6)	MIRc|SINE|MIR	40258	NR_111005	388815	Hs.473394	NR_027790		MIR99AHG	C21orf34|C21orf35|LINC00478|MONC	mir-99a-let-7c cluster host gene	ncRNA
33.6666-3	chr16	9512137	9512377	+	0.2	NA	Intergenic	Intergenic	-56752	NR_126349	104266959	Hs.578888	NR_126349	ENSG00000261075	LINC01195	-	long intergenic non-protein coding RNA 1195	ncRNA
37.7	chr11	46645174	46645446	+	0.2	NA	intron (NM_001346358, intron 2 of 16)	intron (NM_001346358, intron 2 of 16)	28034	NR_144422	9776	Hs.127403	NM_014741	ENSG00000175224	ATG13	KIAA0652|PARATARG8	autophagy related 13	protein-coding
36.9-8	chr8	105634845	105635154	+	0.2	NA	intron (NM_001362837, intron 5 of 7)	intron (NM_001362837, intron 5 of 7)	315456	NM_001362837	23414	Hs.431009	NM_012082	ENSG00000169946	ZFPM2	DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2	zinc finger protein, FOG family member 2	protein-coding
78.7334	chr2	14663039	14663546	+	0.2	NA	Intergenic	Intergenic	30575	NR_144632	151354	Hs.260855	NM_145175	ENSG00000162981	LRATD1	FAM84A|NSE1|PP11517	LRAT domain containing 1	protein-coding
20.8667-5	chr12	16880561	16880676	+	0.2	NA	Intergenic	Intergenic	-108129	NR_036619	728622	Hs.741380	NR_036619		SKP1P2	SKP1B|p19B	S-phase kinase associated protein 1 pseudogene 2	pseudo
51.2-3	chr20	50579158	50579519	+	0.2	NA	intron (NM_002827, intron 7 of 9)	intron (NM_002827, intron 7 of 9)	-6448	NR_030375	693230		NR_030375	ENSG00000208018	MIR645	MIRN645|hsa-mir-645	microRNA 645	ncRNA
37.1334	chr10	9128728	9129266	+	0.2	NA	Intergenic	Intergenic	-146616	NR_108039	100507163	Hs.649223	NR_108039		LINC00709	-	long intergenic non-protein coding RNA 709	ncRNA
28.6-10	chr18	65251859	65252058	+	0.2	NA	Intergenic	Intergenic	-498294	NM_033646	1005	Hs.541003	NM_004361	ENSG00000081138	CDH7	CDH7L1	cadherin 7	protein-coding
44.6667-5	chrX	84404256	84404632	+	0.2	NA	intron (NM_001177478, intron 4 of 9)	intron (NM_001177478, intron 4 of 9)	98009	NM_001177478	139324	Hs.559546	NM_144657	ENSG00000165259	HDX	CXorf43|D030011N01Rik	highly divergent homeobox	protein-coding
25.4-17	chr8	71139985	71140219	+	0.2	NA	Intergenic	Intergenic	216604	NM_172058	2138	Hs.444971	NM_000503	ENSG00000104313	EYA1	BOP|BOR|BOS1|OFC1	EYA transcriptional coactivator and phosphatase 1	protein-coding
58.2666-2	chr11	55363805	55364308	+	0.2	NA	Intergenic	Intergenic	-3828	NM_001005275	81328	Hs.554529	NM_001005275	ENSG00000181958	OR4A15	OR11-118	olfactory receptor family 4 subfamily A member 15	protein-coding
41.7334-4	chr7	46846586	46847029	+	0.2	NA	Intergenic	Intergenic	-149685	NR_134575	730338	Hs.640207	NR_134575	ENSG00000233539	LOC730338	-	uncharacterized LOC730338	ncRNA
26.6667-4	chr13	112708707	112708877	+	0.2	NA	intron (NM_032189, intron 1 of 28)	intron (NM_032189, intron 1 of 28)	18463	NM_015205	23250	Hs.29189	NM_015205	ENSG00000068650	ATP11A	ATPIH|ATPIS	ATPase phospholipid transporting 11A	protein-coding
15.4667-11	chr2	24940467	24940610	+	0.2	NA	Intergenic	Charlie15b|DNA|hAT-Charlie	-20301	NM_001320613	109	Hs.467898	NM_004036	ENSG00000138031	ADCY3	AC-III|AC3|BMIQ19	adenylate cyclase 3	protein-coding
29.8333-3	chr20	9574105	9574254	+	0.2	NA	intron (NM_020341, intron 5 of 10)	intron (NM_020341, intron 5 of 10)	-59181	NR_109957	101929329	Hs.589878	NR_109957	ENSG00000225988	LAMP5-AS1	-	LAMP5 antisense RNA 1	ncRNA
48.4-3	chr4	71903237	71903658	+	0.2	NA	Intergenic	Intergenic	-97927	NM_001204306	2638	Hs.418497	NM_000583	ENSG00000145321	GC	DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP	GC vitamin D binding protein	protein-coding
21.1333-8	chr12	41559271	41559443	+	0.2	NA	intron (NM_001164595, intron 7 of 9)	intron (NM_001164595, intron 7 of 9)	121618	NM_013377	29951	Hs.380044	NM_013377	ENSG00000165966	PDZRN4	LNX4|SAMCAP3L	PDZ domain containing ring finger 4	protein-coding
32.5001	chr14	68124187	68124431	+	0.2	NA	intron (NM_133509, intron 7 of 10)	MIR1_Amn|SINE|MIR	300717	NM_001321815	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
30.2333-3	chr11	99011761	99012182	+	0.2	NA	Intergenic	L1MA9|LINE|L1	-8978	NM_014361	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
70.4001	chr22	48996824	48997232	+	0.2	NA	Intergenic	L1ME1|LINE|L1	130258	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA
33.9333	chr10	101654667	101654962	+	0.2	NA	intron (NR_136613, intron 4 of 7)	L1ME4a|LINE|L1	40356	NM_022039	6468	Hs.500822	NM_022039	ENSG00000107829	FBXW4	DAC|FBW4|FBWD4|SHFM3|SHSF3	F-box and WD repeat domain containing 4	protein-coding
53.0667-2	chr9	106333011	106333319	+	0.2	NA	Intergenic	Intergenic	-267763	NR_107048	102465995		NR_107048	ENSG00000277889	MIR8081	hsa-mir-8081	microRNA 8081	ncRNA
32-10	chr7	3636720	3636946	+	0.2	NA	intron (NM_152744, intron 2 of 44)	L1MA10|LINE|L1	335581	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
26.8-17	chr6	152590516	152590720	+	0.2	NA	intron (NM_182961, intron 3 of 145)	intron (NM_182961, intron 3 of 145)	46233	NM_033071	23345	Hs.12967	NM_015293	ENSG00000131018	SYNE1	8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2	spectrin repeat containing nuclear envelope protein 1	protein-coding
18.9333-10	chr5	2444731	2444977	+	0.2	NA	Intergenic	Intergenic	-132653	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA
55.2-2	chr20	54444701	54445238	+	0.2	NA	Intergenic	L1PA7|LINE|L1	-30624	NM_018431	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
36.2666-3	chr6	97299236	97299579	+	0.2	NA	Intergenic	L2a|LINE|L2	-6179	NR_110757	101927314	Hs.520283	NR_110757	ENSG00000271860	LOC101927314	-	uncharacterized LOC101927314	ncRNA
41.7999-5	chrX	78740372	78740811	+	0.2	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	-7118	NM_001278000	2846	Hs.522701	NM_005296	ENSG00000147145	LPAR4	GPR23|LPA4|P2RY9|P2Y5-LIKE|P2Y9	lysophosphatidic acid receptor 4	protein-coding
20.1667-9	chr3	1785705	1785805	+	0.2	NA	Intergenic	Intergenic	-313048	NM_001350095	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
32.7-9	chr4	56173853	56174031	+	0.2	NA	intron (NM_020722, intron 1 of 10)	L1M3|LINE|L1	3747	NM_020722	57482	Hs.596667	NM_020722	ENSG00000109265	KIAA1211	CRAD	KIAA1211	protein-coding
52.1333-2	chr2	143224529	143224899	+	0.2	NA	intron (NM_018460, intron 4 of 13)	intron (NM_018460, intron 4 of 13)	95295	NM_018460	55843	Hs.171011	NM_018460	ENSG00000075884	ARHGAP15	BM046	Rho GTPase activating protein 15	protein-coding
44.6-2	chr14	66137503	66137946	+	0.2	NA	Intergenic	Intergenic	-348647	NR_024338	440184	Hs.412138	NM_001004331	ENSG00000196553	CCDC196	C14orf53|LINC00238|NCRNA00238	coiled-coil domain containing 196	protein-coding
40-10	chr6	105589151	105589484	+	0.2	NA	Intergenic	AluSp|SINE|Alu	-186235	NM_002726	5550	Hs.436564	NM_002726	ENSG00000085377	PREP	PE|PEP	prolyl endopeptidase	protein-coding
30.7667-11	chr8	49480156	49480465	+	0.2	NA	Intergenic	Intergenic	31870	NR_134294	100507464	Hs.245745	NR_134294	ENSG00000253380	LOC100507464	-	uncharacterized LOC100507464	ncRNA
71.9333	chr6	70547207	70547830	+	0.2	NA	intron (NM_020819, intron 19 of 20)	MER20|DNA|hAT-Charlie	-19412	NM_145267	135154	Hs.418495	NM_145267	ENSG00000154079	SDHAF4	C6orf57|Sdh8	succinate dehydrogenase complex assembly factor 4	protein-coding
43.0334	chr17	64383475	64383952	+	0.2	NA	intron (NM_000442, intron 2 of 15)	intron (NM_000442, intron 2 of 15)	7147	NM_000442	5175	Hs.376675	NM_000442	ENSG00000261371	PECAM1	CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM	platelet and endothelial cell adhesion molecule 1	protein-coding
44.4-10	chr5	28401289	28401779	+	0.2	NA	Intergenic	Intergenic	-113869	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
47.8-4	chr5	127901222	127901618	+	0.2	NA	intron (NM_001317938, intron 6 of 6)	intron (NM_001317938, intron 6 of 6)	181755	NR_152807	644873	Hs.340623	NR_015360	ENSG00000245937	LINC01184	-	long intergenic non-protein coding RNA 1184	ncRNA
65.4	chr1	156031709	156032037	+	0.2	NA	Intergenic	L1MA10|LINE|L1	-10922	NM_003145	6746	Hs.74564	NM_003145	ENSG00000163479	SSR2	HSD25|TLAP|TRAP-BETA|TRAPB	signal sequence receptor subunit 2	protein-coding
50	chr2	41010350	41010835	+	0.2	NA	Intergenic	L1MD3|LINE|L1	-498157	NM_001112802	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding
47.3333-5	chr20	2009904	2010468	+	0.2	NA	Intergenic	L2b|LINE|L2	-15901	NM_001190899	5173	Hs.22584	NM_024411	ENSG00000101327	PDYN	ADCA|PENKB|SCA23	prodynorphin	protein-coding
30.6667-9	chr4	156706061	156706389	+	0.2	NA	Intergenic	Intergenic	265574	NM_016205	56034	Hs.570855	NM_016205	ENSG00000145431	PDGFC	FALLOTEIN|SCDGF	platelet derived growth factor C	protein-coding
55.0667-2	chr14	30423056	30423463	+	0.2	NA	Intergenic	Intergenic	-135864	NM_001308097	55632	Hs.509008	NM_017769	ENSG00000092140	G2E3	KIAA1333|PHF7B	G2/M-phase specific E3 ubiquitin protein ligase	protein-coding
17.8333-15	chr8	115882489	115882768	+	0.2	NA	Intergenic	L2a|LINE|L2	-213653	NM_014112	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
83.3999	chr3	167228543	167229296	+	0.2	NA	Intergenic	Intergenic	151364	NM_001199202	79740	Hs.478143	NM_024687	ENSG00000169064	ZBBX	-	zinc finger B-box domain containing	protein-coding
65.5	chr17	72224952	72225434	+	0.2	NA	Intergenic	L1MC4a|LINE|L1	104173	NM_000346	6662	Hs.647409	NM_000346	ENSG00000125398	SOX9	CMD1|CMPD1|SRA1|SRXX2|SRXY10	SRY-box transcription factor 9	protein-coding
47.8-3	chr3	185330113	185330549	+	0.2	NA	intron (NM_001242317, intron 2 of 12)	intron (NM_001242317, intron 2 of 12)	-32805	NM_004721	9175	Hs.591306	NM_004721	ENSG00000073803	MAP3K13	LZK|MEKK13|MLK	mitogen-activated protein kinase kinase kinase 13	protein-coding
61.4	chr1	56995011	56995541	+	0.2	NA	3' UTR (NM_001365792, exon 15 of 15)	3' UTR (NM_001365792, exon 15 of 15)	-29136	NM_001278543	732	Hs.391835	NM_000066	ENSG00000021852	C8B	C82	complement C8 beta chain	protein-coding
48.9	chr10	47400843	47401154	+	0.2	NA	Intergenic	Intergenic	-6167	NR_134500	107001062	Hs.576719	NR_134500		LOC107001062	-	uncharacterized LOC107001062	ncRNA
44.5333	chr1	154029485	154029823	+	0.2	NA	intron (NM_001159484, intron 28 of 37)	AluSp|SINE|Alu	38892	NM_001030	6232	Hs.546291	NM_001030	ENSG00000177954	RPS27	DBA17|MPS-1|MPS1|S27	ribosomal protein S27	protein-coding
29.7334-4	chrX	69338673	69338838	+	0.2	NA	Intergenic	L1M4|LINE|L1	159198	NR_103715	100996279		NR_103715	ENSG00000215162	LINC00269	CXorf62|NCRNA00269	long intergenic non-protein coding RNA 269	ncRNA
51.3333-3	chr3	37136318	37136787	+	0.2	NA	intron (NM_006309, intron 2 of 27)	A-rich|Low_complexity|Low_complexity	38030	NM_006309	9209	Hs.740522	NM_006309	ENSG00000093167	LRRFIP2	HUFI-2	LRR binding FLII interacting protein 2	protein-coding
20.6667-15	chr5	35705480	35705599	+	0.2	NA	intron (NM_024867, intron 17 of 36)	intron (NM_024867, intron 17 of 36)	87676	NM_144722	79925	Hs.298863	NM_024867	ENSG00000152582	SPEF2	CT122|KPL2	sperm flagellar 2	protein-coding
56.6665	chr6	5442491	5442962	+	0.2	NA	intron (NM_006567, intron 4 of 6)	intron (NM_006567, intron 4 of 6)	15349	NR_125846	101927972	Hs.668417	NR_125846	ENSG00000269985	LOC101927972	-	uncharacterized LOC101927972	ncRNA
30.4667	chr1	78607182	78607434	+	0.2	NA	Intergenic	Intergenic	-13140	NM_006820	10964	Hs.744918	NM_006820	ENSG00000137959	IFI44L	C1orf29|GS3686	interferon induced protein 44 like	protein-coding
37.9667	chr1	68905492	68905868	+	0.2	NA	Intergenic	Intergenic	-150218	NR_146608	105378785	Hs.127911	NR_146608	ENSG00000223883	LINC01707	-	long intergenic non-protein coding RNA 1707	ncRNA
35.9333-4	chr3	45454433	45454729	+	0.2	NA	intron (NM_001368263, intron 6 of 20)	intron (NM_001368263, intron 6 of 20)	54964	NR_048543	100885795	Hs.641094	NR_048543		LARS2-AS1	-	LARS2 antisense RNA 1	ncRNA
39.4-3	chr11	119369003	119369296	+	0.2	NA	intron (NM_001243759, intron 1 of 11)	intron (NM_001243759, intron 1 of 11)	-4941	NM_171997	9099	Hs.524085	NM_004205	ENSG00000036672	USP2	UBP41|USP9	ubiquitin specific peptidase 2	protein-coding
56.2665	chr20	58004058	58004532	+	0.2	NA	non-coding (NR_147083, exon 2 of 2)	non-coding (NR_147083, exon 2 of 2)	391	NR_147083	105376992	Hs.736662	NR_147083	ENSG00000275852	LINC01742	-	long intergenic non-protein coding RNA 1742	ncRNA
45.6667	chr1	84415127	84415611	+	0.2	NA	TTS (NM_058248)	TTS (NM_058248)	7018	NM_058248	58511	Hs.129142	NM_021233	ENSG00000137976	DNASE2B	DLAD	deoxyribonuclease 2 beta	protein-coding
55.3-2	chr11	8531020	8531445	+	0.2	NA	intron (NM_001352388, intron 1 of 14)	L1M5|LINE|L1	62744	NM_001289061	65975	Hs.501833	NM_030906	ENSG00000130413	STK33	-	serine/threonine kinase 33	protein-coding
62.3666	chr7	31908326	31909144	+	0.2	NA	intron (NM_001322059, intron 3 of 17)	MIR|SINE|MIR	161672	NM_001191057	5137	Hs.143821	NM_005020	ENSG00000154678	PDE1C	DFNA74|Hcam3|cam-PDE 1C|hCam-3	phosphodiesterase 1C	protein-coding
69.2	chr10	109898927	109899433	+	0.2	NA	intron (NM_001324131, intron 3 of 20)	MLT1J2|LTR|ERVL-MaLR	24066	NM_001324136	7511	Hs.390623	NM_020383	ENSG00000108039	XPNPEP1	APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1	X-prolyl aminopeptidase 1	protein-coding
20.6667-2	chr10	97844660	97844833	+	0.2	NA	intron (NR_108035, intron 1 of 2)	L2-3_Crp|LINE|L2	5052	NR_108035	100505561	Hs.351904	NR_108035	ENSG00000227356	LINC00866	-	long intergenic non-protein coding RNA 866	ncRNA
46.9333	chr12	4823459	4823951	+	0.2	NA	intron (NM_002235, intron 1 of 1)	AluSx1|SINE|Alu	14529	NM_002235	3742	Hs.306190	NM_002235	ENSG00000130035	KCNA6	HBK2|KV1.6|PPP1R96	potassium voltage-gated channel subfamily A member 6	protein-coding
18.6333-16	chr5	63292198	63292330	+	0.2	NA	Intergenic	L1MC4a|LINE|L1	670028	NM_000524	3350	Hs.247940	NM_000524	ENSG00000178394	HTR1A	5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD	5-hydroxytryptamine receptor 1A	protein-coding
54.4-5	chr4	79947578	79948037	+	0.2	NA	intron (NM_001286781, intron 16 of 16)	intron (NM_001286781, intron 16 of 16)	120336	NR_026555	118425	Hs.104215	NR_026555	ENSG00000251321	PCAT4	GDEP|PCA4|PCAN1	prostate cancer associated transcript 4	ncRNA
54.3-2	chr8	67119396	67119924	+	0.2	NA	intron (NM_001363133, intron 13 of 27)	L1MB3|LINE|L1	35812	NM_001291339	79848	Hs.370147	NM_024790	ENSG00000104218	CSPP1	CSPP|JBTS21	centrosome and spindle pole associated protein 1	protein-coding
70.0001	chr1	111406559	111407126	+	0.2	NA	Intergenic	Intergenic	-16991	NR_029429	441897	Hs.568387	NR_029429	ENSG00000227179	PGCP1	-	progastricsin pseudogene 1	pseudo
37.1333	chr1	119366788	119367082	+	0.2	NA	Intergenic	Intergenic	-1850	NM_001005783	51179	Hs.659767	NM_016527	ENSG00000116882	HAO2	GIG16|HAOX2	hydroxyacid oxidase 2	protein-coding
30.8667-3	chr17	26878598	26878792	+	0.2	NA	Intergenic	(TGGAA)n|Simple_repeat|Simple_repeat	210546	NR_135673	105371703	Hs.649918	NR_135673		LOC105371703	-	uncharacterized LOC105371703	ncRNA
60.6	chr7	12585423	12585811	+	0.2	NA	intron (NR_156701, intron 3 of 14)	L2|LINE|L2	-3906	NM_033128	85477	Hs.633359	NM_033128	ENSG00000006747	SCIN	-	scinderin	protein-coding
41.9-5	chr2	6302160	6302470	+	0.2	NA	Intergenic	Intergenic	73107	NR_110251	101929390	Hs.434407	NR_110251	ENSG00000227007	LINC01247	-	long intergenic non-protein coding RNA 1247	ncRNA
31.0667-9	chr4	97625514	97625758	+	0.2	NA	intron (NM_174952, intron 10 of 10)	MLT1J1|LTR|ERVL-MaLR	258710	NR_102713	101410545	Hs.628520	NR_102713	ENSG00000251620	STPG2-AS1	-	STPG2 antisense RNA 1	ncRNA
43.4	chr10	20467184	20467591	+	0.2	NA	Intergenic	(TCTTT)n|Simple_repeat|Simple_repeat	-84583	NR_039822	100616383		NR_039822	ENSG00000265372	MIR4675	-	microRNA 4675	ncRNA
20.9-23	chr8	66114915	66115091	+	0.2	NA	Intergenic	Intergenic	-12126	NM_033058	84675	Hs.85524	NM_033058	ENSG00000147573	TRIM55	MURF-2|RNF29|muRF2	tripartite motif containing 55	protein-coding
37-7	chr4	60212457	60212681	+	0.2	NA	Intergenic	L1M5|LINE|L1	-710050	NR_039652	100616450		NR_039652	ENSG00000265829	MIR548AG1	-	microRNA 548ag-1	ncRNA
30.1-5	chr20	46890996	46891428	+	0.2	NA	Intergenic	Intergenic	-3412	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding
38.8667	chr1	61747332	61747782	+	0.2	NA	intron (NM_001350145, intron 1 of 43)	intron (NM_001350145, intron 1 of 43)	5077	NM_001350145	10207	Hs.478125	NM_005799	ENSG00000132849	PATJ	Cipp|INADL|InaD-like|hINADL	PATJ crumbs cell polarity complex component	protein-coding
32.6334	chr18	7390658	7390879	+	0.2	NA	Intergenic	L2a|LINE|L2	70238	NM_001364581	112577592		NM_001364581		LOC112577592	-	uncharacterized LOC112577592	protein-coding
31.4667	chr10	17334865	17335330	+	0.2	NA	intron (NM_001004470, intron 4 of 7)	L3b|LINE|CR1	-51839	NR_034129	100128098	Hs.530588	NR_034129	ENSG00000204832	ST8SIA6-AS1	-	ST8SIA6 antisense RNA 1	ncRNA
54.4-7	chr7	27896078	27896715	+	0.2	NA	intron (NM_175061, intron 2 of 4)	intron (NM_175061, intron 2 of 4)	156301	NM_001362795	8887	Hs.34576	NM_006024	ENSG00000106052	TAX1BP1	CALCOCO3|T6BP|TXBP151	Tax1 binding protein 1	protein-coding
36.8667-2	chr1	109374523	109374873	+	0.2	NA	intron (NM_002959, intron 1 of 19)	AluSx|SINE|Alu	18659	NM_001205228	6272	Hs.485195	NM_002959	ENSG00000134243	SORT1	Gp95|LDLCQ6|NT3|NTR3	sortilin 1	protein-coding
39-5	chr22	26077208	26077485	+	0.2	NA	Intergenic	Intergenic	-92116	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding
34.9	chr11	81083090	81083545	+	0.2	NA	Intergenic	AluSx|SINE|Alu	-320514	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
75.8668	chr1	95636537	95637056	+	0.2	NA	Intergenic	Intergenic	126680	NR_110622	100996635	Hs.639548	NR_110621	ENSG00000228971	LINC02607	-	long intergenic non-protein coding RNA 2607	ncRNA
63.2334	chr14	67690000	67690463	+	0.2	NA	exon (NM_016026, exon 5 of 7)	exon (NM_016026, exon 5 of 7)	5533	NM_001252650	51109	Hs.719925	NM_016026	ENSG00000072042	RDH11	ARSDR1|CGI82|HCBP12|MDT1|PSDR1|RALR1|RDJCSS|SCALD|SDR7C1	retinol dehydrogenase 11	protein-coding
31.4	chr1	53652790	53653239	+	0.2	NA	intron (NM_001367484, intron 2 of 10)	intron (NM_001367484, intron 2 of 10)	81190	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding
69.5-2	chr8	82767047	82768050	+	0.2	NA	Intergenic	Intergenic	-144556	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
38.8-4	chr6	51932102	51932453	+	0.2	NA	intron (NM_138694, intron 37 of 66)	intron (NM_138694, intron 37 of 66)	155336	NM_138694	5314	Hs.662050	NM_138694	ENSG00000170927	PKHD1	ARPKD|FCYT|FPC|PKD4|TIGM1	PKHD1 ciliary IPT domain containing fibrocystin/polyductin	protein-coding
40.5334-4	chr5	98412499	98412724	+	0.2	NA	Intergenic	L2b|LINE|L2	-251372	NR_146477	105379098	Hs.566306	NR_146477		LINC01846	-	long intergenic non-protein coding RNA 1846	ncRNA
31.4-16	chr5	67300132	67300320	+	0.2	NA	Intergenic	Intergenic	-103427	NM_005582	4064	Hs.87205	NM_005582	ENSG00000134061	CD180	LY64|Ly78|RP105	CD180 molecule	protein-coding
23.4334	chr8	110048706	110048868	+	0.2	NA	Intergenic	Intergenic	-73016	NM_014379	27012	Hs.13285	NM_014379	ENSG00000164794	KCNV1	HNKA|KCNB3|KV2.3|KV8.1	potassium voltage-gated channel modifier subfamily V member 1	protein-coding
30.0667-8	chr4	119976533	119976959	+	0.2	NA	Intergenic	Intergenic	37206	NR_121639	100996694	Hs.119926	NR_121639	ENSG00000250392	LINC02502	-	long intergenic non-protein coding RNA 2502	ncRNA
93.3334	chr2	8877879	8878745	+	0.2	NA	intron (NR_135606, intron 6 of 12)	intron (NR_135606, intron 6 of 12)	-40699	NM_001348736	57498	Hs.9873	NM_020738	ENSG00000134313	KIDINS220	ARMS|SINO	kinase D interacting substrate 220	protein-coding
59.9333	chr8	113855016	113855397	+	0.2	NA	Intergenic	L2|LINE|L2	-418267	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
36.4	chr10	115020048	115020464	+	0.2	NA	Intergenic	Intergenic	25599	NR_120677	102724589		NR_120677	ENSG00000236799	LINC02626	-	long intergenic non-protein coding RNA 2626	ncRNA
19.8-10	chr20	60119987	60120111	+	0.2	NA	Intergenic	Intergenic	-18443	NR_046099	284757	Hs.542528	NM_001004305	ENSG00000228340	MIR646HG	-	MIR646 host gene	ncRNA
26.3333-2	chr12	114299676	114299896	+	0.2	NA	Intergenic	Intergenic	-58016	NR_146536	105369996	Hs.577438	NR_146536	ENSG00000257476	LINC02459	-	long intergenic non-protein coding RNA 2459	ncRNA
41.5333-5	chr16	9720960	9721219	+	0.2	NA	Intergenic	Intergenic	-265584	NR_126349	104266959	Hs.578888	NR_126349	ENSG00000261075	LINC01195	-	long intergenic non-protein coding RNA 1195	ncRNA
51.2667	chr20	56778243	56778704	+	0.2	NA	Intergenic	MIR|SINE|MIR	149167	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding
40.5-6	chr2	46839095	46839419	+	0.2	NA	intron (NR_024452, intron 1 of 2)	intron (NR_024452, intron 1 of 2)	11393	NR_024452	100134259	Hs.114449	NR_024452	ENSG00000239332	LINC01119	-	long intergenic non-protein coding RNA 1119	ncRNA
41-2	chr13	87639012	87639282	+	0.2	NA	intron (NR_033829, intron 1 of 5)	intron (NR_033829, intron 1 of 5)	-20407	NR_039722	100616182		NR_039722	ENSG00000266052	MIR4500	-	microRNA 4500	ncRNA
35.3333-6	chr14	70558700	70558939	+	0.2	NA	Intergenic	L2|LINE|L2	-23815	NM_003814	8748	Hs.177984	NM_003814	ENSG00000134007	ADAM20	-	ADAM metallopeptidase domain 20	protein-coding
30.2-12	chr5	33426784	33427099	+	0.2	NA	Intergenic	L1PA15|LINE|L1	-13755	NM_001258437	6897	Hs.481860	NM_152295	ENSG00000113407	TARS	ThrRS	threonyl-tRNA synthetase	protein-coding
15.3333-4	chr16	53903896	53903972	+	0.2	NA	intron (NM_001363894, intron 8 of 9)	(TA)n|Simple_repeat|Simple_repeat	-135459	NR_103838	100505692	Hs.664629	NR_103838		FTO-IT1	-	FTO intronic transcript 1	ncRNA
46.9333-2	chr14	58493218	58493538	+	0.2	NA	intron (NM_001329944, intron 26 of 31)	L2c|LINE|L2	53697	NM_001244193	9786	Hs.232532	NM_014749	ENSG00000100578	KIAA0586	JBTS23|SRTD14|Talpid3	KIAA0586	protein-coding
48.2332	chr3	96321143	96321537	+	0.2	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	-38624	NR_107027	102465864		NR_107027	ENSG00000278103	MIR8060	hsa-mir-8060	microRNA 8060	ncRNA
60-3	chr7	83220322	83220804	+	0.2	NA	Intergenic	L2c|LINE|L2	-57679	NM_033026	27445	Hs.12376	NM_014510	ENSG00000186472	PCLO	ACZ|PCH3	piccolo presynaptic cytomatrix protein	protein-coding
38.5999-3	chr22	33840094	33840345	+	0.2	NA	intron (NM_001362953, intron 1 of 14)	intron (NM_001362953, intron 1 of 14)	80209	NM_004737	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding
52.2-2	chr2	86439524	86439903	+	0.2	NA	Intergenic	Intergenic	-1658	NM_018433	55818	Hs.557425	NM_018433	ENSG00000115548	KDM3A	JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA	lysine demethylase 3A	protein-coding
45.5333-4	chr4	150074589	150075072	+	0.2	NA	Intergenic	L1PA8A|LINE|L1	-3615	NM_001040260	166614	Hs.591683	NM_152619	ENSG00000170390	DCLK2	CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2	doublecortin like kinase 2	protein-coding
13.1333-8	chr3	187543359	187543473	+	0.2	NA	Intergenic	Intergenic	96370	NR_146716	105374261	Hs.535726	NR_146716		LINC02041	-	long intergenic non-protein coding RNA 2041	ncRNA
52.8-2	chr16	79126928	79127316	+	0.2	NA	intron (NM_001291997, intron 7 of 7)	intron (NM_001291997, intron 7 of 7)	473615	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding
28.1-11	chr7	16669149	16669355	+	0.2	NA	intron (NM_001362717, intron 2 of 11)	AluSz6|SINE|Alu	8038	NM_001362717	28969	Hs.487635	NM_014038	ENSG00000136261	BZW2	HSPC028|MST017|MSTP017	basic leucine zipper and W2 domains 2	protein-coding
46.6-4	chr21	14589811	14590062	+	0.2	NA	intron (NR_046512, intron 2 of 4)	intron (NR_046512, intron 2 of 4)	-6534	NM_001256370	64092	Hs.473341	NM_022136	ENSG00000155307	SAMSN1	HACS1|NASH1|SASH2|SH3D6B|SLy2	SAM domain, SH3 domain and nuclear localization signals 1	protein-coding
57.0666-2	chr2	16306337	16306968	+	0.2	NA	Intergenic	Intergenic	256225	NR_126559	104797537	Hs.435748	NR_126559	ENSG00000236289	GACAT3	LINC01458|lncRNA-AC130710	gastric cancer associated transcript 3	ncRNA
50.1	chr9	26918891	26919216	+	0.2	NA	intron (NM_001031689, intron 9 of 13)	intron (NM_001031689, intron 9 of 13)	-26225	NM_001167575	79886	Hs.178357	NM_024828	ENSG00000120159	CAAP1	C9orf82|CAAP	caspase activity and apoptosis inhibitor 1	protein-coding
54.6334	chr7	119146264	119146606	+	0.2	NA	Intergenic	Intergenic	760940	NR_131962	105375475	Hs.566654	NR_131960	ENSG00000225546	LINC02476	LVCAT5	long intergenic non-protein coding RNA 2476	ncRNA
44.9333-7	chrX	108251401	108251786	+	0.2	NA	intron (NM_001287758, intron 3 of 45)	L2a|LINE|L2	159815	NM_052936	115201	Hs.8763	NM_052936	ENSG00000101844	ATG4A	APG4A|AUTL2	autophagy related 4A cysteine peptidase	protein-coding
34.3333-7	chr3	115369578	115369894	+	0.2	NA	Intergenic	L3b|LINE|CR1	-222448	NM_001348803	26137	Hs.202577	NM_015642	ENSG00000181722	ZBTB20	DPZF|HOF|ODA-8S|PRIMS|ZNF288	zinc finger and BTB domain containing 20	protein-coding
84.1667	chr8	102256962	102257625	+	0.2	NA	intron (NM_001282873, intron 58 of 58)	intron (NM_001282873, intron 58 of 58)	17842	NR_125415	101927221	Hs.492445	NR_125415	ENSG00000246263	UBR5-AS1	-	UBR5 antisense RNA 1	ncRNA
36.4666	chr1	160415534	160415838	+	0.2	NA	5' UTR (NM_020335, exon 2 of 8)	5' UTR (NM_020335, exon 2 of 8)	15122	NM_020335	57216	Hs.99477	NM_020335	ENSG00000162738	VANGL2	LPP1|LTAP|STB1|STBM|STBM1	VANGL planar cell polarity protein 2	protein-coding
39.2-11	chr9	90607858	90608267	+	0.2	NA	Intergenic	MIR|SINE|MIR	-25316	NR_034157	340515	Hs.522284	NM_001105317		LINC01501	-	long intergenic non-protein coding RNA 1501	ncRNA
25.6333-8	chr2	225374126	225374539	+	0.2	NA	Intergenic	Intergenic	-25378	NM_001371273								
31.3333-10	chr6	125104737	125104926	+	0.2	NA	Intergenic	Intergenic	-48942	NM_001003397	7164	Hs.591347	NM_003287	ENSG00000111907	TPD52L1	D53	TPD52 like 1	protein-coding
32.7333	chr1	191113645	191113942	+	0.2	NA	Intergenic	Intergenic	114705	NR_146892	105371660	Hs.127094	NR_146892	ENSG00000233882	LINC01680	-	long intergenic non-protein coding RNA 1680	ncRNA
30.6-2	chr10	12899579	12899821	+	0.2	NA	intron (NM_001282658, intron 6 of 6)	L1ME4b|LINE|L1	102013	NM_031455	83643	Hs.498720	NM_031455	ENSG00000151468	CCDC3	-	coiled-coil domain containing 3	protein-coding
23.6-16	chr4	71779893	71780060	+	0.2	NA	intron (NM_000583, intron 1 of 12)	intron (NM_000583, intron 1 of 12)	4103	NM_000583	2638	Hs.418497	NM_000583	ENSG00000145321	GC	DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP	GC vitamin D binding protein	protein-coding
41.5333-9	chr6	155489817	155490187	+	0.2	NA	Intergenic	MIR|SINE|MIR	-24842	NR_134597	105378068	Hs.131541	NR_134596		LOC105378068	-	uncharacterized LOC105378068	ncRNA
22.6-8	chr15	79527919	79528118	+	0.2	NA	Intergenic	Intergenic	95502	NM_015206	23251	Hs.301654	NM_015206	ENSG00000169330	MINAR1	KIAA1024|UBTOR	membrane integral NOTCH2 associated receptor 1	protein-coding
37.8-8	chr4	79134561	79134886	+	0.2	NA	intron (NR_038342, intron 3 of 5)	L1PA14|LINE|L1	162975	NR_038342	100505875	Hs.480055	NR_038342		LINC01088	-	long intergenic non-protein coding RNA 1088	ncRNA
28.0667-8	chr2	182842413	182842727	+	0.2	NA	intron (NM_001463, intron 2 of 5)	intron (NM_001463, intron 2 of 5)	24067	NM_001463	2487	Hs.128453	NM_001463	ENSG00000162998	FRZB	FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ	frizzled related protein	protein-coding
43.9001	chr1	89489895	89490266	+	0.2	NA	Intergenic	L1M1|LINE|L1	-34749	NM_001134476	23507	Hs.482017	NM_015350	ENSG00000197147	LRRC8B	TA-LRRP|TALRRP	leucine rich repeat containing 8 VRAC subunit B	protein-coding
39.1334	chr4	37174413	37174625	+	0.2	NA	Intergenic	Intergenic	67472	NR_039965	100616435		NR_039965	ENSG00000264319	MIR4801	-	microRNA 4801	ncRNA
30-7	chr17	62021711	62021866	+	0.2	NA	intron (NM_005121, intron 8 of 29)	L2a|LINE|L2	43490	NM_005121	9969	Hs.282678	NM_005121	ENSG00000108510	MED13	ARC250|DRIP250|HSPC221|THRAP1|TRAP240	mediator complex subunit 13	protein-coding
54.3	chr4	96271473	96271916	+	0.2	NA	Intergenic	AluSc|SINE|Alu	-39009	NR_147149	105377338		NR_147149		LINC02267	-	long intergenic non-protein coding RNA 2267	ncRNA
19.9-11	chr22	39918021	39918136	+	0.2	NA	intron (NM_004810, intron 1 of 7)	intron (NM_004810, intron 1 of 7)	-8526	NM_001291824	9402	Hs.517499	NM_004810	ENSG00000100351	GRAP2	GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38	GRB2 related adaptor protein 2	protein-coding
82.6	chr7	16334045	16334507	+	0.2	NA	intron (NM_001101417, intron 2 of 8)	intron (NM_001101417, intron 2 of 8)	87262	NM_001101426	729920	Hs.636502	NM_001101417	ENSG00000214960	CRPPA	ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD	CDP-L-ribitol pyrophosphorylase A	protein-coding
45.2	chr15	72106896	72107281	+	0.2	NA	intron (NM_006901, intron 1 of 41)	L1MC5a|LINE|L1	-7170	NM_001166340	123228	Hs.513002	NM_145204	ENSG00000166192	SENP8	DEN1|NEDP1|PRSC2	SUMO peptidase family member, NEDD8 specific	protein-coding
55.6-2	chr2	100798260	100798678	+	0.2	NA	Intergenic	Intergenic	-21670	NM_002518	4862	Hs.156832	NM_002518	ENSG00000170485	NPAS2	MOP4|PASD4|bHLHe9	neuronal PAS domain protein 2	protein-coding
31.3	chr1	69210143	69210388	+	0.2	NA	Intergenic	Tigger2a|DNA|TcMar-Tigger	154367	NR_146608	105378785	Hs.127911	NR_146608	ENSG00000223883	LINC01707	-	long intergenic non-protein coding RNA 1707	ncRNA
71.7333	chrX	42115447	42116059	+	0.2	NA	Intergenic	LTR16|LTR|ERVL	-192199	NM_001367721	8573	Hs.495984	NM_003688	ENSG00000147044	CASK	CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK	calcium/calmodulin dependent serine protein kinase	protein-coding
65.8	chr16	78590170	78590635	+	0.2	NA	intron (NM_001291997, intron 7 of 7)	intron (NM_001291997, intron 7 of 7)	490748	NM_001291997	51741	Hs.461453	NM_016373	ENSG00000186153	WWOX	D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1	WW domain containing oxidoreductase	protein-coding
52.9	chr1	219226426	219226935	+	0.2	NA	Intergenic	Intergenic	51711	NM_001300772	127018	Hs.657617	NM_138794	ENSG00000143353	LYPLAL1	Q96AV0	lysophospholipase like 1	protein-coding
38.4-12	chr8	123145119	123145451	+	0.2	NA	intron (NM_001363151, intron 19 of 19)	intron (NM_001363151, intron 19 of 19)	-33762	NM_207006	84985	Hs.379821	NM_032899	ENSG00000147689	FAM83A	BJ-TSA-9	family with sequence similarity 83 member A	protein-coding
45.2666-3	chr10	14927867	14928326	+	0.2	NA	non-coding (NR_146962, exon 10 of 15)	non-coding (NR_146962, exon 10 of 15)	26000	NM_001350966	64421	Hs.655932	NM_022487	ENSG00000152457	DCLRE1C	A-SCID|DCLREC1C|RS-SCID|SCIDA|SNM1C	DNA cross-link repair 1C	protein-coding
21.0667-13	chr9	7261174	7261302	+	0.2	NA	Intergenic	L1PB3|LINE|L1	503888	NM_001304341	23081	Hs.709425	NM_015061	ENSG00000107077	KDM4C	GASC1|JHDM3C|JMJD2C|TDRD14C	lysine demethylase 4C	protein-coding
47.3-2	chr1	185912438	185912827	+	0.2	NA	intron (NM_031935, intron 6 of 106)	LTR16C|LTR|ERVL	178241	NM_031935	83872	Hs.58877	NM_031935	ENSG00000143341	HMCN1	ARMD1|FBLN6|FIBL-6|FIBL6	hemicentin 1	protein-coding
24.9667-14	chr8	130168595	130168988	+	0.2	NA	intron (NM_001362925, intron 10 of 29)	intron (NM_001362925, intron 10 of 29)	-84023	NR_045385	100507117	Hs.106015	NR_045385	ENSG00000280543	ASAP1-IT2	-	ASAP1 intronic transcript 2	ncRNA
28.6667-8	chr4	42446911	42447077	+	0.2	NA	intron (NM_001105529, intron 29 of 35)	L4_A_Mam|LINE|RTE-X	49506	NM_001080505	152573	Hs.370904	NM_001080505	ENSG00000178343	SHISA3	hShisa3	shisa family member 3	protein-coding
73.4666	chr4	148942912	148943342	+	0.2	NA	promoter-TSS (NR_134681)	promoter-TSS (NR_134681)	-749	NR_134681	105377480	Hs.148699	NR_134681	ENSG00000249317	LOC105377480	-	uncharacterized LOC105377480	ncRNA
29.6667-8	chr8	78570667	78571211	+	0.2	NA	intron (NM_181839, intron 1 of 2)	intron (NM_181839, intron 1 of 2)	-12436	NR_125389	101927003	Hs.614849	NR_125389	ENSG00000254266	PKIA-AS1	-	PKIA antisense RNA 1	ncRNA
47.3333-2	chr12	48555533	48555915	+	0.2	NA	Intergenic	HUERS-P3b-int|LTR|ERV1	14322	NM_002289	3906	Hs.72938	NM_002289	ENSG00000167531	LALBA	LYZG	lactalbumin alpha	protein-coding
58.9	chr10	48444208	48444791	+	0.2	NA	Intergenic	Intergenic	42887	NM_001278548	5599	Hs.138211	NM_002750	ENSG00000107643	MAPK8	JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c	mitogen-activated protein kinase 8	protein-coding
40.5333-6	chr21	22780489	22780876	+	0.2	NA	Intergenic	L1MEf|LINE|L1	-298602	NR_106746	102466967		NR_106746	ENSG00000275469	MIR6130	hsa-mir-6130	microRNA 6130	ncRNA
17.7333-5	chr13	61850261	61850407	+	0.2	NA	Intergenic	L1ME3A|LINE|L1	179214	NR_046995	100874143	Hs.552684	NR_046995	ENSG00000229578	LINC00358	-	long intergenic non-protein coding RNA 358	ncRNA
48.9-2	chr10	71307026	71307342	+	0.2	NA	Intergenic	Intergenic	-12069	NM_001174098	55315	Hs.438419	NM_018344	ENSG00000198246	SLC29A3	ENT3|HCLAP|HJCD|PHID	solute carrier family 29 member 3	protein-coding
35.7667-2	chr10	49584197	49584588	+	0.2	NA	Intergenic	MLT1A1|LTR|ERVL-MaLR	-24703	NM_020984	1103	Hs.302002	NM_020549	ENSG00000070748	CHAT	CHOACTASE|CMS1A|CMS1A2|CMS6	choline O-acetyltransferase	protein-coding
54.2666	chr6	91758801	91759168	+	0.2	NA	Intergenic	MIR|SINE|MIR	-68556	NR_104154	101929083	Hs.586238	NR_104154		CASC6	-	cancer susceptibility 6	ncRNA
31.3667-3	chr15	71895201	71895679	+	0.2	NA	intron (NM_006901, intron 25 of 41)	intron (NM_006901, intron 25 of 41)	84886	NM_016346	10002	Hs.187354	NM_014249	ENSG00000278570	NR2E3	ESCS|PNR|RNR|RP37|rd7	nuclear receptor subfamily 2 group E member 3	protein-coding
34.6333	chr11	90336143	90336535	+	0.2	NA	intron (NR_104190, intron 1 of 6)	intron (NR_104190, intron 1 of 6)	85107	NR_104190	101929222	Hs.616763	NR_104190	ENSG00000261645	DISC1FP1	Boymaw	DISC1 fusion partner 1	ncRNA
52.6667-4	chr22	27685242	27685799	+	0.2	NA	Intergenic	Intergenic	116236	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	MN1 proto-oncogene, transcriptional regulator	protein-coding
26.5333-3	chr14	64641210	64641401	+	0.2	NA	Intergenic	Intergenic	-63119	NM_001308147	26030	Hs.509637	NM_015549	ENSG00000126822	PLEKHG3	ARHGEF43|KIAA0599	pleckstrin homology and RhoGEF domain containing G3	protein-coding
36.8	chr10	23230963	23231367	+	0.2	NA	intron (NM_001365862, intron 13 of 15)	AluJb|SINE|Alu	38853	NM_178161	256297	Hs.351503	NM_178161	ENSG00000168267	PTF1A	PACA|PAGEN2|PTF1-p48|bHLHa29|p48	pancreas associated transcription factor 1a	protein-coding
32.9-8	chr19	35313510	35313690	+	0.2	NA	3' UTR (NM_080600, exon 12 of 12)	3' UTR (NM_080600, exon 12 of 12)	-15569	NM_001185101	933	Hs.579691	NM_001771	ENSG00000012124	CD22	SIGLEC-2|SIGLEC2	CD22 molecule	protein-coding
45.6	chr8	128222423	128222923	+	0.2	NA	Intergenic	Intergenic	72557	NR_031613	100302281		NR_031613	ENSG00000221261	MIR1208	MIRN1208|hsa-mir-1208	microRNA 1208	ncRNA
28.4667-9	chr3	139860237	139860510	+	0.2	NA	Intergenic	MLT1J1|LTR|ERVL-MaLR	-74812	NM_022131	64084	Hs.158529	NM_022131	ENSG00000158258	CLSTN2	ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma	calsyntenin 2	protein-coding
31.3-4	chr18	21622398	21622643	+	0.2	NA	intron (NM_001291916, intron 1 of 3)	intron (NM_001291916, intron 1 of 3)	10206	NM_006938	6632	Hs.464734	NM_006938	ENSG00000167088	SNRPD1	HsT2456|SMD1|SNRPD|Sm-D1	small nuclear ribonucleoprotein D1 polypeptide	protein-coding
59.4667	chr1	75154165	75154683	+	0.2	NA	intron (NM_001001933, intron 8 of 9)	intron (NM_001001933, intron 8 of 9)	20036	NM_001256114	431707	Hs.403934	NM_001001933	ENSG00000162624	LHX8	LHX7	LIM homeobox 8	protein-coding
61.1	chr8	104047673	104048205	+	0.2	NA	intron (NM_001348499, intron 19 of 23)	MIRb|SINE|MIR	-175396	NM_001282882	9699	Hs.655271	NM_014677	ENSG00000176406	RIMS2	OBOE|RAB3IP3|RIM2	regulating synaptic membrane exocytosis 2	protein-coding
61.0001-2	chr8	122718458	122718929	+	0.2	NA	Intergenic	THE1A|LTR|ERVL-MaLR	-24587	NR_126348	104266958	Hs.575540	NR_126348	ENSG00000253819	LINC01151	-	long intergenic non-protein coding RNA 1151	ncRNA
53.5-2	chr15	25883719	25884218	+	0.2	NA	Intergenic	L1ME3B|LINE|L1	-18392	NR_040082	100128714	Hs.587854	NR_040082	ENSG00000206187	LINC02346	-	long intergenic non-protein coding RNA 2346	ncRNA
57.1666	chr2	117122888	117123614	+	0.2	NA	Intergenic	L1MC5|LINE|L1	-691440	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
33.1333-9	chr8	124396706	124397002	+	0.2	NA	Intergenic	Intergenic	-24155	NM_194291	157378	Hs.100691	NM_194291	ENSG00000164983	TMEM65	-	transmembrane protein 65	protein-coding
29.7333-13	chr4	82500619	82500898	+	0.2	NA	intron (NM_001080506, intron 5 of 7)	intron (NM_001080506, intron 5 of 7)	61230	NM_001353455	441027	Hs.507676	NM_001080506	ENSG00000249242	TMEM150C	TTN3	transmembrane protein 150C	protein-coding
51.5-3	chrX	122205333	122205653	+	0.2	NA	Intergenic	Intergenic	834521	NR_037444	100500869		NR_037444	ENSG00000265456	MIR3672	-	microRNA 3672	ncRNA
36	chr1	193850403	193850618	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	545765	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
36.2667-7	chr5	155935980	155936211	+	0.2	NA	Intergenic	MER52A|LTR|ERV1	-390662	NM_000337	6444	Hs.387207	NM_000337	ENSG00000170624	SGCD	35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD	sarcoglycan delta	protein-coding
37.1667	chr19	58187804	58188097	+	0.2	NA	intron (NM_133502, intron 4 of 7)	AluSz|SINE|Alu	4889	NM_133502	10782	Hs.83761	NM_016324	ENSG00000171606	ZNF274	HFB101|ZF2|ZKSCAN19|ZSCAN51	zinc finger protein 274	protein-coding
30.1333-5	chr2	185261934	185262290	+	0.2	NA	Intergenic	Intergenic	-95040	NR_136319	105373782	Hs.128285	NR_136319		LOC105373782	-	uncharacterized LOC105373782	ncRNA
42.2666-3	chr22	25471981	25472306	+	0.2	NA	Intergenic	Intergenic	16497	NR_106875	102466198		NR_106875	ENSG00000277872	MIR6817	hsa-mir-6817	microRNA 6817	ncRNA
47.6-2	chr11	112981502	112981985	+	0.2	NA	intron (NM_181351, intron 1 of 18)	intron (NM_181351, intron 1 of 18)	-18283	NR_120563	101928847	Hs.711235	NR_120563	ENSG00000247416	LOC101928847	-	uncharacterized LOC101928847	ncRNA
26.5667-9	chr8	119641197	119641329	+	0.2	NA	intron (NM_001330600, intron 1 of 25)	intron (NM_001330600, intron 1 of 25)	-2424	NM_001040092	5168	Hs.190977	NM_006209	ENSG00000136960	ENPP2	ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2	ectonucleotide pyrophosphatase/phosphodiesterase 2	protein-coding
45.8-9	chr8	88375035	88375421	+	0.2	NA	Intergenic	L2c|LINE|L2	-47745	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
50.4	chr18	35041298	35041634	+	0.2	NA	promoter-TSS (NR_046177)	promoter-TSS (NR_046177)	53	NM_014268	10982	Hs.532824	NM_014268	ENSG00000166974	MAPRE2	CSCSC2|EB1|EB2|RP1	microtubule associated protein RP/EB family member 2	protein-coding
36.1333-2	chr13	87611903	87612150	+	0.2	NA	intron (NR_033829, intron 1 of 5)	MIR3|SINE|MIR	6714	NR_039722	100616182		NR_039722	ENSG00000266052	MIR4500	-	microRNA 4500	ncRNA
45.1334	chr3	36620055	36620681	+	0.2	NA	Intergenic	Intergenic	119493	NM_033403	85443	Hs.631907	NM_033403	ENSG00000163673	DCLK3	CLR|DCAMKL3|DCDC3C|DCK3	doublecortin like kinase 3	protein-coding
36.6-2	chr11	27825388	27825736	+	0.2	NA	Intergenic	L1PB3|LINE|L1	-103532	NM_170731	627	Hs.502182	NM_001709	ENSG00000176697	BDNF	ANON2|BULN2	brain derived neurotrophic factor	protein-coding
58.3334	chr22	19569767	19570260	+	0.2	NA	Intergenic	MIR|SINE|MIR	-3174	NR_024381	150185	Hs.719752	NR_024381		LINC00895	-	long intergenic non-protein coding RNA 895	ncRNA
53.0666-2	chr18	63078465	63078771	+	0.2	NA	Intergenic	L1MB8|LINE|L1	240762	NM_000633	596	Hs.150749	NM_000633	ENSG00000171791	BCL2	Bcl-2|PPP1R50	BCL2 apoptosis regulator	protein-coding
42.4-8	chr7	38553323	38553713	+	0.2	NA	intron (NM_001635, intron 1 of 20)	intron (NM_001635, intron 1 of 20)	77855	NM_001635	273	Hs.592182	NM_001635	ENSG00000078053	AMPH	AMPH1	amphiphysin	protein-coding
49.8334-3	chrX	65507608	65508277	+	0.2	NA	TTS (NM_001010888)	TTS (NM_001010888)	19207	NM_001010888	340554	Hs.21249	NM_001010888	ENSG00000102053	ZC3H12B	CXorf32|MCPIP2	zinc finger CCCH-type containing 12B	protein-coding
35.7-8	chr9	131961745	131962028	+	0.2	NA	intron (NM_001253881, intron 3 of 6)	intron (NM_001253881, intron 3 of 6)	117981	NM_001253882	9442	Hs.374262	NM_004269	ENSG00000160563	MED27	CRAP34|CRSP34|CRSP8|MED3|TRAP37	mediator complex subunit 27	protein-coding
49.1999	chr2	140623214	140623530	+	0.2	NA	intron (NM_018557, intron 41 of 90)	intron (NM_018557, intron 41 of 90)	-36687	NR_106979	102465692		NR_106979	ENSG00000283506	MIR7157	hsa-mir-7157	microRNA 7157	ncRNA
33.2-10	chr3	58360136	58360477	+	0.2	NA	intron (NM_001349498, intron 1 of 17)	intron (NM_001349498, intron 1 of 17)	27000	NM_001349498	54899	Hs.190544	NM_017771	ENSG00000168297	PXK	MONAKA|SLOB	PX domain containing serine/threonine kinase like	protein-coding
31-5	chr16	74062366	74062867	+	0.2	NA	Intergenic	L1ME3E|LINE|L1	152905	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA
47.7334	chr8	75238293	75238656	+	0.2	NA	intron (NR_103849, intron 1 of 1)	intron (NR_103849, intron 1 of 1)	40007	NR_103850	101805492	Hs.571424	NR_103848		CASC9	ESCCAL-1|ESSCAL1|LINC00981|linc-JPH1	cancer susceptibility 9	ncRNA
40.6667-5	chr14	67360004	67360291	+	0.2	NA	promoter-TSS (NM_004094)	promoter-TSS (NM_004094)	-181	NM_004094	1965	Hs.151777	NM_004094	ENSG00000134001	EIF2S1	EIF-2|EIF-2A|EIF-2alpha|EIF2|EIF2A	eukaryotic translation initiation factor 2 subunit alpha	protein-coding
55.2	chr16	87441535	87441902	+	0.2	NA	intron (NM_015144, intron 2 of 12)	intron (NM_015144, intron 2 of 12)	49382	NM_022818	81631	Hs.356061	NM_022818	ENSG00000140941	MAP1LC3B	ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a	microtubule associated protein 1 light chain 3 beta	protein-coding
25.3333-11	chr4	79219284	79219480	+	0.2	NA	intron (NR_038342, intron 4 of 5)	intron (NR_038342, intron 4 of 5)	106679	NM_032693	84779	Hs.676048	NM_032693	ENSG00000156269	NAA11	ARD1B|ARD2|hARD2	N(alpha)-acetyltransferase 11, NatA catalytic subunit	protein-coding
45.6333-2	chr19	30063174	30063617	+	0.2	NA	Intergenic	Intergenic	121156	NM_003796	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	URI1 prefoldin like chaperone	protein-coding
41.3-4	chr2	222259212	222259639	+	0.2	NA	intron (NM_181457, intron 4 of 7)	intron (NM_181457, intron 4 of 7)	-38722	NR_161172	151278	Hs.350729	NM_153038	ENSG00000163081	CCDC140	-	coiled-coil domain containing 140	ncRNA
27-2	chr10	113517892	113518149	+	0.2	NA	Intergenic	Intergenic	-32811	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding
71.2665	chr10	8087888	8088481	+	0.2	NA	Intergenic	AluSc|SINE|Alu	33496	NM_002051	2625	Hs.524134	NM_002051	ENSG00000107485	GATA3	HDR|HDRS	GATA binding protein 3	protein-coding
24.3333	chr1	192539603	192539789	+	0.2	NA	Intergenic	Intergenic	-36077	NM_002922	5996	Hs.75256	NM_002922	ENSG00000090104	RGS1	1R20|BL34|HEL-S-87|IER1|IR20	regulator of G protein signaling 1	protein-coding
27.5333-9	chr20	18065513	18065730	+	0.2	NA	Intergenic	L1ME3D|LINE|L1	-6433	NM_001303461	58495	Hs.661013	NM_021220	ENSG00000125850	OVOL2	CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339	ovo like zinc finger 2	protein-coding
55.3333	chr18	12513990	12514547	+	0.2	NA	intron (NM_020148, intron 4 of 15)	L2a|LINE|L2	81494	NR_136514	105371998	Hs.515283	NR_136514		LOC105371998	-	uncharacterized LOC105371998	ncRNA
36.6667-3	chr2	17899178	17899515	+	0.2	NA	intron (NM_002252, intron 1 of 2)	MIR|SINE|MIR	20679	NM_002252	3790	Hs.414489	NM_002252	ENSG00000170745	KCNS3	KV9.3	potassium voltage-gated channel modifier subfamily S member 3	protein-coding
51.8-3	chr6	124103641	124104073	+	0.2	NA	intron (NM_001040214, intron 1 of 6)	AluY|SINE|Alu	-179148	NM_001300740	154215	Hs.656604	NM_153355	ENSG00000188580	NKAIN2	FAM77B|NKAIP2|TCBA|TCBA1	sodium/potassium transporting ATPase interacting 2	protein-coding
43.8334-3	chr7	55659579	55660001	+	0.2	NA	Intergenic	Intergenic	28242	NR_027340	360132	Hs.446691	NM_182827	ENSG00000176826	FKBP9P1	FKBP9L	FKBP prolyl isomerase 9 pseudogene 1	pseudo
49.7333-6	chr9	23998343	23998664	+	0.2	NA	Intergenic	L1MA1|LINE|L1	-147902	NM_001351466	1993	Hs.166109	NM_004432	ENSG00000107105	ELAVL2	HEL-N1|HELN1|HUB	ELAV like RNA binding protein 2	protein-coding
37.6666	chr11	110953262	110953611	+	0.2	NA	Intergenic	Intergenic	143882	NR_149131	105369490		NR_149131	ENSG00000271584	LINC02550	-	long intergenic non-protein coding RNA 2550	ncRNA
32.7-2	chr11	22105766	22105951	+	0.2	NA	Intergenic	L2a|LINE|L2	-87227	NM_001142649	203859	Hs.154329	NM_213599	ENSG00000171714	ANO5	GDD1|LGMD2L|LGMDR12|TMEM16E	anoctamin 5	protein-coding
38.8	chr2	35680233	35680440	+	0.2	NA	Intergenic	Intergenic	208931	NR_039629	100616475		NR_039629	ENSG00000265301	MIR548AD	-	microRNA 548ad	ncRNA
31.6667-10	chr5	53247019	53247373	+	0.2	NA	Intergenic	Intergenic	137354	NR_034107	257396	Hs.12326	NR_034107	ENSG00000247796	LOC257396	-	uncharacterized LOC257396	ncRNA
28.1333-5	chr14	81202410	81202613	+	0.2	NA	TTS (NR_003021)	TTS (NR_003021)	323	NR_003021	677845	Hs.693251	NR_003021	ENSG00000221303	SNORA79	ACA65|SNORA79A	small nucleolar RNA, H/ACA box 79	snoRNA
46.8001-2	chr2	223029316	223029702	+	0.2	NA	Intergenic	Intergenic	-22421	NM_080671	23704	Hs.348522	NM_080671	ENSG00000152049	KCNE4	MIRP3	potassium voltage-gated channel subfamily E regulatory subunit 4	protein-coding
30.2-14	chr7	17280339	17280545	+	0.2	NA	Intergenic	L2c|LINE|L2	-18210	NM_001621	196	Hs.171189	NM_001621	ENSG00000106546	AHR	RP85|bHLHe76	aryl hydrocarbon receptor	protein-coding
32.5334-2	chr3	120398018	120398227	+	0.2	NA	intron (NM_007085, intron 10 of 10)	L1MB7|LINE|L1	-2393	NR_029584	406975		NR_029584	ENSG00000284121	MIR198	MIRN198|miR-198	microRNA 198	ncRNA
26.8667	chr1	52586645	52586848	+	0.2	NA	Intergenic	Intergenic	-15625	NM_015696	2882	Hs.43728	NM_015696	ENSG00000116157	GPX7	CL683|GPX6|GPx-7|GSHPx-7|NPGPx	glutathione peroxidase 7	protein-coding
29.5333-5	chr4	35683405	35683711	+	0.2	NA	Intergenic	Intergenic	560381	NR_146893	116984	Hs.479451	NM_015230	ENSG00000047365	ARAP2	CENTD1|PARX	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	protein-coding
29.7667	chr10	972857	973219	+	0.2	NA	Intergenic	Intergenic	-15396	NM_012341	23560	Hs.215766	NM_012341	ENSG00000107937	GTPBP4	CRFG|NGB|NOG1	GTP binding protein 4	protein-coding
65.8-3	chr3	181381275	181381793	+	0.2	NA	intron (NR_075091, intron 3 of 7)	intron (NR_075091, intron 3 of 7)	60952	NR_125407	102724604	Hs.570524	NR_125407	ENSG00000241231	LOC102724604	-	uncharacterized LOC102724604	ncRNA
39.2667-8	chr8	143936320	143936836	+	0.2	NA	intron (NM_201379, intron 5 of 31)	intron (NM_201379, intron 5 of 31)	3019	NM_201384	5339	Hs.434248	NM_000445	ENSG00000178209	PLEC	EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN	plectin	protein-coding
62.6-2	chr2	9313847	9314259	+	0.2	NA	intron (NM_003887, intron 3 of 27)	AluSx|SINE|Alu	107241	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	protein-coding
55.3-5	chr8	68444730	68445241	+	0.2	NA	intron (NR_146187, intron 2 of 13)	intron (NR_146187, intron 2 of 13)	-113494	NR_038877	286189	Hs.593427	NR_038877	ENSG00000248801	C8orf34-AS1	-	C8orf34 antisense RNA 1	ncRNA
39-3	chr11	82263402	82263786	+	0.2	NA	intron (NR_120571, intron 3 of 7)	L1ME2|LINE|L1	140319	NR_120571	101928989	Hs.145117	NR_120571	ENSG00000245832	MIR4300HG	-	MIR4300 host gene	ncRNA
63.2	chr11	111111035	111111593	+	0.2	NA	Intergenic	Intergenic	-13996	NR_149131	105369490		NR_149131	ENSG00000271584	LINC02550	-	long intergenic non-protein coding RNA 2550	ncRNA
22.6-7	chr15	41180452	41180652	+	0.2	NA	Intergenic	Intergenic	50205	NM_001286441	161829	Hs.307999	NM_152596	ENSG00000178997	EXD1	EXDL1	exonuclease 3'-5' domain containing 1	protein-coding
77.9335	chr2	20862839	20863370	+	0.2	NA	Intergenic	L1MC4|LINE|L1	-39974	NM_001282719	60526	Hs.187823	NM_021925	ENSG00000118961	LDAH	C2orf43|hLDAH	lipid droplet associated hydrolase	protein-coding
54.9	chr13	27705601	27706048	+	0.2	NA	Intergenic	L1M4|LINE|L1	83932	NM_152705	51082	Hs.507584	NM_015972	ENSG00000186184	POLR1D	AC19|POLR1C|RPA16|RPA9|RPAC2|RPC16|RPO1-3|TCS2	RNA polymerase I and III subunit D	protein-coding
29.9333-6	chr19	33818378	33818602	+	0.2	NA	Intergenic	Intergenic	21620	NM_001129994	79047	Hs.221873	NM_024076	ENSG00000153885	KCTD15	-	potassium channel tetramerization domain containing 15	protein-coding
35.5334	chr12	125921297	125921558	+	0.2	NA	Intergenic	MIR|SINE|MIR	61947	NR_034132	400084	Hs.156191	NR_034132	ENSG00000249267	LINC00939	-	long intergenic non-protein coding RNA 939	ncRNA
29.1-7	chr21	33377570	33377772	+	0.2	NA	Intergenic	(AGC)n|Simple_repeat|Simple_repeat	-25225	NM_001329128	3460	Hs.634632	NM_005534	ENSG00000159128	IFNGR2	AF-1|IFGR2|IFNGT1|IMD28	interferon gamma receptor 2	protein-coding
48	chr1	157991648	157992018	+	0.2	NA	Intergenic	L2a|LINE|L2	-1440	NM_001286349	55243	Hs.272234	NM_018240	ENSG00000183853	KIRREL1	KIRREL|NEPH1	kirre like nephrin family adhesion molecule 1	protein-coding
14.8333-7	chr17	63745805	63745946	+	0.2	NA	3' UTR (NM_020198, exon 13 of 13)	3' UTR (NM_020198, exon 13 of 13)	-3889	NM_001363787	92335	Hs.514402	NM_153335	ENSG00000266173	STRADA	LYK5|NY-BR-96|PMSE|STRAD|STRAD alpha|Stlk	STE20 related adaptor alpha	protein-coding
47.8667	chr6	75376039	75376499	+	0.2	NA	intron (NM_001300866, intron 2 of 6)	MIRb|SINE|MIR	-6917	NR_125859	101928540	Hs.526972	NR_125859		LOC101928540	-	uncharacterized LOC101928540	ncRNA
41.3667	chr16	20874217	20874423	+	0.2	NA	intron (NM_173475, intron 1 of 2)	intron (NM_173475, intron 1 of 2)	-25562	NM_001369632	57149	Hs.745012	NM_020424	ENSG00000102897	LYRM1	A211C6.1	LYR motif containing 1	protein-coding
46.3333-3	chr8	76663582	76663915	+	0.2	NA	intron (NR_024360, intron 2 of 3)	intron (NR_024360, intron 2 of 3)	-17499	NM_024721	79776	Hs.458973	NM_024721	ENSG00000091656	ZFHX4	ZFH4|ZHF4	zinc finger homeobox 4	protein-coding
48.3	chr2	33864400	33864767	+	0.2	NA	intron (NR_126403, intron 2 of 5)	intron (NR_126403, intron 2 of 5)	-136366	NR_003143	151325	Hs.528847	NM_207329	ENSG00000239649	MYADML	-	myeloid associated differentiation marker like (pseudogene)	pseudo
27-4	chr11	45188441	45188689	+	0.2	NA	intron (NM_001256695, intron 4 of 7)	intron (NM_001256695, intron 4 of 7)	41222	NM_001256695	56981	Hs.178715	NM_001256695	ENSG00000019485	PRDM11	PFM8	PR/SET domain 11	protein-coding
33.7-10	chr3	36021659	36021947	+	0.2	NA	Intergenic	Intergenic	277327	NR_029824	406916		NR_029824	ENSG00000207625	MIR128-2	MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b	microRNA 128-2	ncRNA
17.4666	chr10	35738090	35738202	+	0.2	NA	Intergenic	MLT1A0-int|LTR|ERVL-MaLR	-40156	NR_110138	102578074		NR_110138	ENSG00000280719	PCAT5	LINC01452|TPCAT-10-36067	prostate cancer associated transcript 5	ncRNA
39.1-3	chr16	80841005	80841614	+	0.2	NA	intron (NR_131948, intron 1 of 2)	L1MEj|LINE|L1	-36711	NM_152342	124359	Hs.60257	NM_152342	ENSG00000166446	CDYL2	PCCP1	chromodomain Y like 2	protein-coding
52.6333-6	chrX	98172076	98172594	+	0.2	NA	Intergenic	MIRc|SINE|MIR	-607800	NR_125391	10824	Hs.654372	NR_125391	ENSG00000236256	DIAPH2-AS1	EPAG	DIAPH2 antisense RNA 1	ncRNA
57.1334-2	chr8	6631995	6632453	+	0.2	NA	intron (NR_125386, intron 1 of 4)	L1MB3|LINE|L1	-10004	NR_107022	102465861		NR_107022	ENSG00000276580	MIR8055	hsa-mir-8055	microRNA 8055	ncRNA
31.9-4	chr15	37209540	37209782	+	0.2	NA	Intergenic	Intergenic	-108350	NM_001220482	4212	Hs.510989	NM_002399	ENSG00000134138	MEIS2	CPCMR|HsT18361|MRG1	Meis homeobox 2	protein-coding
44.4-12	chr7	47004923	47005284	+	0.2	NA	Intergenic	L1MC2|LINE|L1	-307981	NR_134575	730338	Hs.640207	NR_134575	ENSG00000233539	LOC730338	-	uncharacterized LOC730338	ncRNA
18.9333-17	chr7	94222726	94222921	+	0.2	NA	Intergenic	MIR|SINE|MIR	169369	NR_147206	101927525	Hs.571263	NR_147206		COL1A2-AS1	TCONS_00013888|lncRNA8975-1	COL1A2 antisense RNA 1	ncRNA
44.8-5	chr7	24985732	24986282	+	0.2	NA	Intergenic	LTR67B|LTR|ERVL	-5829	NM_015550	26031	Hs.520259	NM_015550	ENSG00000070882	OSBPL3	ORP-3|ORP3|OSBP3	oxysterol binding protein like 3	protein-coding
41.9999	chr2	40016583	40016900	+	0.2	NA	intron (NR_038441, intron 2 of 4)	intron (NR_038441, intron 2 of 4)	99107	NR_038441	100128590	Hs.744988	NR_038441	ENSG00000227028	SLC8A1-AS1	-	SLC8A1 antisense RNA 1	ncRNA
41.5-2	chr14	91996575	91996899	+	0.2	NA	intron (NM_004239, intron 13 of 20)	L3|LINE|CR1	43322	NM_001321851	9321	Hs.632339	NM_004239	ENSG00000100815	TRIP11	ACG1A|CEV14|GMAP-210|GMAP210|ODCD|TRIP-11|TRIP230	thyroid hormone receptor interactor 11	protein-coding
83.7-2	chr8	91723824	91724419	+	0.2	NA	Intergenic	Intergenic	293559	NM_175636	862	Hs.368431	NM_004349	ENSG00000079102	RUNX1T1	AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2	RUNX1 partner transcriptional co-repressor 1	protein-coding
51.1	chr1	114846862	114847324	+	0.2	NA	Intergenic	AluJo|SINE|Alu	-7710	NM_001282542	6847	Hs.112743	NM_003176	ENSG00000198765	SYCP1	CT8|HOM-TES-14|SCP-1|SCP1	synaptonemal complex protein 1	protein-coding
26.9-13	chr5	146574203	146574557	+	0.2	NA	Intergenic	MIR|SINE|MIR	-58267	NM_194251	134391	Hs.483732	NM_194251	ENSG00000173250	GPR151	GALR4|GALRL|GPCR|GPCR-2037|PGR7	G protein-coupled receptor 151	protein-coding
28.0667-2	chr11	8265028	8265267	+	0.2	NA	intron (NM_001270428, intron 1 of 3)	MIRc|SINE|MIR	-1269	NM_002315	4004	Hs.654426	NM_002315	ENSG00000166407	LMO1	RBTN1|RHOM1|TTG1	LIM domain only 1	protein-coding
29.2-9	chr5	12841774	12841971	+	0.2	NA	Intergenic	Intergenic	174013	NR_039659	100616234		NR_039659	ENSG00000283468	MIR4454	-	microRNA 4454	ncRNA
32.2-5	chr20	44606916	44607167	+	0.2	NA	intron (NM_001281444, intron 4 of 5)	MLT1A1|LTR|ERVL-MaLR	24462	NM_001281445	11142	Hs.472831	NM_007066	ENSG00000168734	PKIG	PKI-gamma	cAMP-dependent protein kinase inhibitor gamma	protein-coding
31.0333-2	chr13	36677846	36678161	+	0.2	NA	intron (NM_203451, intron 1 of 1)	intron (NM_203451, intron 1 of 1)	3983	NM_203451	400120	Hs.422375	NM_203451	ENSG00000180440	SERTM1	C13orf36	serine rich and transmembrane domain containing 1	protein-coding
66.8	chr2	199704751	199705348	+	0.2	NA	Intergenic	Intergenic	96981	NR_110270	101927641	Hs.549598	NR_110270	ENSG00000238217	LINC01877	-	long intergenic non-protein coding RNA 1877	ncRNA
35.9-2	chr17	80686926	80687223	+	0.2	NA	intron (NM_020761, intron 3 of 33)	intron (NM_020761, intron 3 of 33)	118558	NR_110852	101928855	Hs.670692	NR_110852	ENSG00000262833	LOC101928855	-	uncharacterized LOC101928855	ncRNA
37.8667-4	chr2	103138665	103138867	+	0.2	NA	Intergenic	Intergenic	-154337	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
15.9667	chr10	33630694	33630773	+	0.2	NA	Intergenic	LTR33|LTR|ERVL	141947	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA
37.6-7	chr8	53202055	53202360	+	0.2	NA	Intergenic	Intergenic	49430	NM_001318497	4986	Hs.106795	NM_000912	ENSG00000082556	OPRK1	K-OR-1|KOR|KOR-1|OPRK	opioid receptor kappa 1	protein-coding
45.8-5	chr21	23439031	23439454	+	0.2	NA	Intergenic	Intergenic	-54407	NR_040254	266917	Hs.145622	NR_040254	ENSG00000228592	D21S2088E	-	D21S2088E	ncRNA
26.0666-3	chr11	112458646	112458803	+	0.2	NA	Intergenic	L1ME4a|LINE|L1	-23508	NR_120559	101928823	Hs.126118	NR_120559	ENSG00000254968	LINC02763	-	long intergenic non-protein coding RNA 2763	ncRNA
36.5-3	chr11	103290027	103290332	+	0.2	NA	intron (NM_001377, intron 75 of 88)	MLT1C|LTR|ERVL-MaLR	180753	NM_001080463	79659	Hs.503721	NM_001377	ENSG00000187240	DYNC2H1	ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11	dynein cytoplasmic 2 heavy chain 1	protein-coding
34.3333-8	chr4	23712248	23712618	+	0.2	NA	Intergenic	Intergenic	168859	NM_001330753	10891	Hs.527078	NM_013261	ENSG00000109819	PPARGC1A	LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1	PPARG coactivator 1 alpha	protein-coding
33.8666-5	chr8	104253630	104253943	+	0.2	NA	non-coding (NR_145710, exon 30 of 30)	non-coding (NR_145710, exon 30 of 30)	30451	NM_001282882	9699	Hs.655271	NM_014677	ENSG00000176406	RIMS2	OBOE|RAB3IP3|RIM2	regulating synaptic membrane exocytosis 2	protein-coding
47.9-2	chr6	5163901	5164358	+	0.2	NA	intron (NM_001164841, intron 2 of 3)	L1ME3A|LINE|L1	-15807	NR_037462	100500900		NR_037462	ENSG00000265083	MIR3691	mir-3691	microRNA 3691	ncRNA
36.2334	chr10	64555722	64555926	+	0.2	NA	Intergenic	MamGypLTR1b|LTR|Gypsy	-269704	NR_001446	305	Hs.591361	NR_001446		ANXA2P3	ANX2L3|ANX2P3|LIP2|LPC2C	annexin A2 pseudogene 3	pseudo
38.6-8	chr21	25564902	25565404	+	0.2	NA	intron (NR_001458, intron 1 of 2)	intron (NR_001458, intron 1 of 2)	3008	NR_001458	114614	Hs.697120	NR_001458	ENSG00000234883	MIR155HG	BIC|MIRHG2|NCRNA00172	MIR155 host gene	ncRNA
49.4666-2	chr17	76897680	76898135	+	0.2	NA	intron (NM_144677, intron 3 of 16)	AluSq2|SINE|Alu	25260	NM_198955	146664	Hs.144531	NM_144677	ENSG00000167889	MGAT5B	GnT-IX|GnT-VB	alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B	protein-coding
52.7333-2	chr4	45812402	45812804	+	0.2	NA	Intergenic	LTR79|LTR|ERVL	311451	NM_173536	2565	Hs.375051	NM_173536	ENSG00000163285	GABRG1	-	gamma-aminobutyric acid type A receptor gamma1 subunit	protein-coding
75.3334-2	chr2	129317445	129317866	+	0.2	NA	Intergenic	L1MDa|LINE|L1	-43764	NR_122040	151121	Hs.531687	NM_001033657	ENSG00000204460	LINC01854	-	long intergenic non-protein coding RNA 1854	ncRNA
45.4-2	chr2	23143655	23144159	+	0.2	NA	Intergenic	Intergenic	-241272	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding
39.5667-3	chr2	183148228	183148699	+	0.2	NA	intron (NR_109856, intron 4 of 7)	L1MA4A|LINE|L1	24020	NM_138285	129401	Hs.180591	NM_138285	ENSG00000163002	NUP35	MP-44|MP44|NP44|NUP53	nucleoporin 35	protein-coding
32.1667	chr1	6049827	6050229	+	0.2	NA	intron (NM_001199863, intron 1 of 13)	intron (NM_001199863, intron 1 of 13)	4140	NM_001199862	8514	Hs.440497	NM_003636	ENSG00000069424	KCNAB2	AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2	potassium voltage-gated channel subfamily A regulatory beta subunit 2	protein-coding
32.2-3	chr2	22841878	22842169	+	0.2	NA	Intergenic	Intergenic	305544	NR_110577	102723362	Hs.502887	NR_110577	ENSG00000233587	LINC01884	-	long intergenic non-protein coding RNA 1884	ncRNA
36.2-2	chr1	113583349	113583628	+	0.2	NA	intron (NM_001142782, intron 3 of 20)	intron (NM_001142782, intron 3 of 20)	175667	NM_006608	10745	Hs.655824	NM_006608	ENSG00000116793	PHTF1	PHTF	putative homeodomain transcription factor 1	protein-coding
46.5999-2	chr2	74541752	74542122	+	0.2	NA	intron (NM_032603, intron 4 of 13)	intron (NM_032603, intron 4 of 13)	-7083	NM_001197260	1796	Hs.103854	NM_001381	ENSG00000115325	DOK1	P62DOK|pp62	docking protein 1	protein-coding
38.3-3	chr3	67000820	67001203	+	0.2	NA	intron (NM_032505, intron 2 of 3)	intron (NM_032505, intron 2 of 3)	2704	NM_032505	84541	Hs.116665	NM_032505	ENSG00000163376	KBTBD8	TA-KRP|TAKRP	kelch repeat and BTB domain containing 8	protein-coding
33	chr1	203402894	203403218	+	0.2	NA	Intergenic	Intergenic	-51934	NR_103757	2331	Hs.519168	NM_002023	ENSG00000122176	FMOD	FM|SLRR2E	fibromodulin	protein-coding
52.1667-2	chr17	60305891	60306309	+	0.2	NA	intron (NM_032582, intron 2 of 33)	A-rich|Low_complexity|Low_complexity	-74455	NR_002999	677681		NR_002999	ENSG00000252577	SCARNA20	ACA66	small Cajal body-specific RNA 20	ncRNA
31.9333-2	chr11	100408120	100408517	+	0.2	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-278970	NM_152432	143872	Hs.44004	NM_032021	ENSG00000165895	ARHGAP42	AD031|GRAF3|TMEM133	Rho GTPase activating protein 42	protein-coding
47	chr10	119383066	119383480	+	0.2	NA	intron (NM_005308, intron 3 of 15)	L1MC5|LINE|L1	5301	NR_039829	100616398		NR_039829	ENSG00000265719	MIR4681	-	microRNA 4681	ncRNA
25.0667-8	chr4	94245715	94245860	+	0.2	NA	intron (NM_001128429, intron 6 of 23)	Tigger9b|DNA|TcMar-Tigger	-7522	NM_001254949	56916	Hs.410406	NM_020159	ENSG00000163104	SMARCAD1	ADERM|BASNS|ETL1|HEL1|HRZ	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	protein-coding
46.1	chr2	39931929	39932423	+	0.2	NA	intron (NR_038441, intron 2 of 4)	L2c|LINE|L2	14542	NR_038441	100128590	Hs.744988	NR_038441	ENSG00000227028	SLC8A1-AS1	-	SLC8A1 antisense RNA 1	ncRNA
44.2666	chr10	66569772	66570012	+	0.2	NA	intron (NM_001127384, intron 10 of 17)	intron (NM_001127384, intron 10 of 17)	-356144	NM_178011	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding
50.1333-2	chr20	51086209	51086682	+	0.2	NA	Intergenic	Intergenic	-63338	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding
23.8-4	chr14	76993642	76993798	+	0.2	NA	Intergenic	AluSz|SINE|Alu	34082	NR_133913	105370578	Hs.574184	NR_133913	ENSG00000258602	LINC01629	linc-KIAA1737-2	long intergenic non-protein coding RNA 1629	ncRNA
70.2666	chr9	76399897	76400483	+	0.2	NA	TTS (NR_026890)	TTS (NR_026890)	1591	NR_026890	653162	Hs.655646	NR_026890		RPSAP9	LAMR1P9|RPSA_20_986	ribosomal protein SA pseudogene 9	pseudo
60.4001-2	chr3	79497134	79497808	+	0.2	NA	intron (NM_002941, intron 2 of 30)	intron (NM_002941, intron 2 of 30)	-10416	NR_037488	100500877		NR_037488	ENSG00000265193	MIR3923	-	microRNA 3923	ncRNA
33.1-8	chr8	107758812	107759035	+	0.2	NA	Intergenic	L1MD|LINE|L1	-261005	NM_001146	284	Hs.369675	NM_001146	ENSG00000154188	ANGPT1	AGP1|AGPT|ANG1	angiopoietin 1	protein-coding
34.5-8	chr4	176379384	176379566	+	0.2	NA	Intergenic	AluSx1|SINE|Alu	59509	NM_021928	60559	Hs.42194	NM_021928	ENSG00000129128	SPCS3	PRO3567|SPC22/23|SPC3|YLR066W	signal peptidase complex subunit 3	protein-coding
26.5333-11	chr5	25260047	25260283	+	0.2	NA	intron (NR_136209, intron 1 of 3)	intron (NR_136209, intron 1 of 3)	69212	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
32.1999	chr5	27337729	27337988	+	0.2	NA	Intergenic	Intergenic	-134434	NR_038848	643401	Hs.533212	NR_038848	ENSG00000250337	PURPL	LINC01021	p53 upregulated regulator of p53 levels	ncRNA
24.3667-14	chr8	78587025	78587146	+	0.2	NA	intron (NM_006823, intron 2 of 3)	intron (NM_006823, intron 2 of 3)	-28582	NR_125389	101927003	Hs.614849	NR_125389	ENSG00000254266	PKIA-AS1	-	PKIA antisense RNA 1	ncRNA
64.7334-2	chr8	54022142	54022690	+	0.2	NA	promoter-TSS (NR_109902)	promoter-TSS (NR_109902)	32	NM_201437	6917	Hs.491745	NM_006756	ENSG00000187735	TCEA1	GTF2S|SII|TCEA|TF2S|TFIIS	transcription elongation factor A1	protein-coding
50.2-2	chr3	26571193	26571618	+	0.2	NA	Intergenic	AluJb|SINE|Alu	-51401	NM_052953	116135	Hs.517868	NM_052953	ENSG00000179796	LRRC3B	LRP15	leucine rich repeat containing 3B	protein-coding
61.9334	chr17	60841575	60842218	+	0.2	NA	intron (NM_001330413, intron 7 of 25)	intron (NM_001330413, intron 7 of 25)	164045	NM_001353144	54828	Hs.655028	NM_017679	ENSG00000141376	BCAS3	GAOB1|MAAB	BCAS3 microtubule associated cell migration factor	protein-coding
44.6334	chr6	71421772	71422425	+	0.2	NA	intron (NR_121615, intron 1 of 7)	intron (NR_121615, intron 1 of 7)	1071	NR_121615	102724000	Hs.145785	NR_121615		LINC01626	-	long intergenic non-protein coding RNA 1626	ncRNA
47.6666-5	chr7	135206094	135206367	+	0.2	NA	TTS (NR_106764)	TTS (NR_106764)	848	NR_106764	102465254		NR_106764	ENSG00000277138	MIR6509	hsa-mir-6509	microRNA 6509	ncRNA
54.8-2	chr16	49888215	49888742	+	0.2	NA	Intergenic	L1MA10|LINE|L1	-30559	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding
20.7-6	chr6	103688042	103688145	+	0.2	NA	Intergenic	Intergenic	1171453	NM_001321084	57531	Hs.434340	NM_020771	ENSG00000085382	HACE1	SPPRS	HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1	protein-coding
60.8666-3	chr5	119557051	119557590	+	0.2	NA	Intergenic	L1PB2|LINE|L1	-72238	NM_001367956	340069	Hs.713304	NM_182761	ENSG00000164334	FAM170A	ZNFD	family with sequence similarity 170 member A	protein-coding
36.3333-5	chr6	63613509	63614053	+	0.2	NA	Intergenic	L2c|LINE|L2	-22021	NM_001290259	23469	Hs.348921	NM_015153	ENSG00000118482	PHF3	-	PHD finger protein 3	protein-coding
54.6666-3	chr5	169086160	169086638	+	0.2	NA	intron (NM_003062, intron 4 of 35)	Tigger16b|DNA|TcMar-Tigger	73172	NR_109897	728095	Hs.145601	NR_109897		LOC728095	-	uncharacterized LOC728095	ncRNA
53.1333	chr14	67159130	67159488	+	0.2	NA	intron (NM_001024218, intron 17 of 21)	intron (NM_001024218, intron 17 of 21)	-30131	NM_173526	161142	Hs.412818	NM_173526	ENSG00000172717	FAM71D	C14orf54	family with sequence similarity 71 member D	protein-coding
41.5666-3	chr12	12815225	12815744	+	0.2	NA	intron (NM_201224, intron 2 of 10)	L2c|LINE|L2	2138	NM_201224	51202	Hs.719938	NM_016355	ENSG00000213782	DDX47	E4-DBP|HQ0256|MSTP162|RRP3	DEAD-box helicase 47	protein-coding
33.4333-12	chr8	123874218	123874590	+	0.2	NA	intron (NM_001039112, intron 1 of 40)	L2a|LINE|L2	22417	NM_001039112	654463	Hs.632058	NM_001039112	ENSG00000214814	FER1L6	C8ORFK23	fer-1 like family member 6	protein-coding
28.7-2	chr2	21728236	21728452	+	0.2	NA	Intergenic	Intergenic	-17692	NR_038837	645949	Hs.456782	NR_038837	ENSG00000229621	LINC01822	-	long intergenic non-protein coding RNA 1822	ncRNA
52.9334	chr3	70803758	70804459	+	0.2	NA	Intergenic	Intergenic	260816	NM_001244813	27086	Hs.59368	NM_032682	ENSG00000114861	FOXP1	12CC4|HSPC215|MFH|QRF1|hFKH1B	forkhead box P1	protein-coding
32-7	chr18	78118015	78118238	+	0.2	NA	Intergenic	L1MA6|LINE|L1	-124399	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA
55	chr5	2228627	2229029	+	0.2	NA	Intergenic	L1M8|LINE|L1	83373	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA
33.6667-7	chr3	47731367	47731830	+	0.2	NA	intron (NM_003074, intron 5 of 27)	Tigger1|DNA|TcMar-Tigger	50295	NM_003074	6599	Hs.476179	NM_003074	ENSG00000173473	SMARCC1	BAF155|CRACC1|Rsc8|SRG3|SWI3	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1	protein-coding
26.7333-9	chr5	32366827	32367042	+	0.2	NA	intron (NM_016107, intron 17 of 19)	AluJo|SINE|Alu	27541	NR_030305	693164		NR_030305	ENSG00000207956	MIR579	MIRN579|hsa-mir-579	microRNA 579	ncRNA
59.3333-3	chr7	34363718	34364129	+	0.2	NA	intron (NR_033665, intron 3 of 3)	L2c|LINE|L2	-294295	NM_001300933	387129	Hs.652373	NM_207172	ENSG00000187258	NPSR1	ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1	neuropeptide S receptor 1	protein-coding
55.3332	chr6	49955680	49956130	+	0.2	NA	Intergenic	L2|LINE|L2	-6461	NR_163261	403339	Hs.745543	NM_001166478	ENSG00000214643	DEFB133	-	defensin beta 133	pseudo
74.4	chr8	123126714	123127215	+	0.2	NA	intron (NM_001363153, intron 13 of 19)	AluSg|SINE|Alu	-52083	NM_207006	84985	Hs.379821	NM_032899	ENSG00000147689	FAM83A	BJ-TSA-9	family with sequence similarity 83 member A	protein-coding
42.7333-3	chr3	3117302	3117768	+	0.2	NA	Intergenic	Intergenic	-7161	NM_175727	3568	Hs.68876	NM_000564	ENSG00000091181	IL5RA	CD125|CDw125|HSIL5R3|IL5R	interleukin 5 receptor subunit alpha	protein-coding
39.3333-6	chr8	74531059	74531454	+	0.2	NA	Intergenic	L1MA8|LINE|L1	-17287	NR_049860	100847058		NR_049860	ENSG00000266502	MIR5681A	-	microRNA 5681a	ncRNA
43.5001	chr4	167158208	167158472	+	0.2	NA	intron (NM_001204352, intron 2 of 11)	intron (NM_001204352, intron 2 of 11)	76086	NM_001204353	50859	Hs.481133	NM_016950	ENSG00000196104	SPOCK3	HSAJ1454|TES-3|TICN3	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3	protein-coding
76.3332	chr21	45338613	45339099	+	0.2	NA	non-coding (NR_103811, exon 2 of 2)	non-coding (NR_103811, exon 2 of 2)	3134	NR_103811	388830	Hs.592162	NR_103811	ENSG00000237664	LINC00316	C21orf111|NCRNA00316|PRED59	long intergenic non-protein coding RNA 316	ncRNA
29.7333-2	chr1	226091208	226091442	+	0.2	NA	Intergenic	Intergenic	7750	NR_146920	105373113	Hs.149726	NR_146920		LINC01703	lncPARP1	long intergenic non-protein coding RNA 1703	ncRNA
46.6334	chr6	53839981	53840248	+	0.2	NA	intron (NM_018214, intron 1 of 13)	HAL1|LINE|L1	45109	NM_018214	55227	Hs.606493	NM_018214	ENSG00000137269	LRRC1	LANO|dJ523E19.1	leucine rich repeat containing 1	protein-coding
27.7-15	chr8	110043740	110043896	+	0.2	NA	Intergenic	Intergenic	-68047	NM_014379	27012	Hs.13285	NM_014379	ENSG00000164794	KCNV1	HNKA|KCNB3|KV2.3|KV8.1	potassium voltage-gated channel modifier subfamily V member 1	protein-coding
51.1999	chr2	16217364	16217779	+	0.2	NA	Intergenic	MIR3|SINE|MIR	167144	NR_126559	104797537	Hs.435748	NR_126559	ENSG00000236289	GACAT3	LINC01458|lncRNA-AC130710	gastric cancer associated transcript 3	ncRNA
18.5333-10	chr17	75259581	75259704	+	0.2	NA	intron (NM_001291641, intron 1 of 17)	intron (NM_001291641, intron 1 of 17)	1964	NM_001291641	23163	Hs.87726	NM_014001	ENSG00000125447	GGA3	-	golgi associated, gamma adaptin ear containing, ARF binding protein 3	protein-coding
30.2333-5	chr15	97037701	97037997	+	0.2	NA	Intergenic	L1ME1|LINE|L1	254414	NR_158221	145946	Hs.326528	NM_173499	ENSG00000185594	SPATA8	SRG8	spermatogenesis associated 8	ncRNA
53.4666	chr7	21905599	21906006	+	0.2	NA	intron (NM_001127371, intron 5 of 8)	intron (NM_001127371, intron 5 of 8)	40097	NM_018719	55536	Hs.744069	NM_018719	ENSG00000164649	CDCA7L	JPO2|R1|RAM2	cell division cycle associated 7 like	protein-coding
37.4667	chr2	47631483	47631906	+	0.2	NA	Intergenic	Intergenic	-61363	NM_022055	56660	Hs.591586	NM_022055	ENSG00000184261	KCNK12	K2p12.1|THIK-2|THIK2	potassium two pore domain channel subfamily K member 12	protein-coding
23.1-18	chr8	121575987	121576157	+	0.2	NA	Intergenic	Intergenic	-63274	NR_002835	594842	Hs.668686	NR_002835		HAS2-AS1	HAS2-AS|HAS2AS|HASNT|NCRNA00077	HAS2 antisense RNA 1	ncRNA
25.8666-7	chr8	105645646	105645801	+	0.2	NA	intron (NM_001362837, intron 5 of 7)	MER72|LTR|ERV1	326180	NM_001362837	23414	Hs.431009	NM_012082	ENSG00000169946	ZFPM2	DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2	zinc finger protein, FOG family member 2	protein-coding
38.4-8	chr3	85871818	85872163	+	0.2	NA	intron (NM_001256502, intron 3 of 10)	intron (NM_001256502, intron 3 of 10)	-43940	NR_046752	100874037	Hs.570566	NR_046752	ENSG00000241648	CADM2-AS2	-	CADM2 antisense RNA 2	ncRNA
68.2	chr2	143904267	143904721	+	0.2	NA	Intergenic	Intergenic	-32573	NR_110237	101928386	Hs.668251	NR_110237	ENSG00000232377	LOC101928386	-	uncharacterized LOC101928386	ncRNA
42.6666	chr1	171653687	171654072	+	0.2	NA	Intergenic	Intergenic	-1191	NM_000261	4653	Hs.436037	NM_000261	ENSG00000034971	MYOC	GLC1A|GPOA|JOAG|JOAG1|TIGR	myocilin	protein-coding
21.7-13	chr5	7408235	7408381	+	0.2	NA	intron (NM_020546, intron 1 of 24)	intron (NM_020546, intron 1 of 24)	12170	NM_020546	108	Hs.481545	NM_020546	ENSG00000078295	ADCY2	AC2|HBAC2	adenylate cyclase 2	protein-coding
52.3334-2	chr2	220229263	220229820	+	0.2	NA	Intergenic	Intergenic	-322976	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA
27.6-7	chr3	71701930	71702087	+	0.2	NA	intron (NM_173359, intron 3 of 7)	intron (NM_173359, intron 3 of 7)	23394	NM_001134651	317649	Hs.581355	NM_173359	ENSG00000163412	EIF4E3	eIF-4E3|eIF4E-3	eukaryotic translation initiation factor 4E family member 3	protein-coding
26.9-8	chr2	8504958	8505142	+	0.2	NA	Intergenic	Intergenic	78742	NR_110257	101929567	Hs.634706	NR_110257	ENSG00000236008	LINC01814	-	long intergenic non-protein coding RNA 1814	ncRNA
59.3333	chr2	42222648	42223019	+	0.2	NA	intron (NM_001145076, intron 1 of 21)	AluY|SINE|Alu	-52602	NR_110584	102723824	Hs.639826	NR_110584		LOC102723824	-	uncharacterized LOC102723824	ncRNA
54.6	chr5	30590126	30590526	+	0.2	NA	Intergenic	Intergenic	-603360	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
41.7333-4	chr20	37200188	37200556	+	0.2	NA	intron (NM_001135771, intron 3 of 16)	intron (NM_001135771, intron 3 of 16)	-20824	NM_152503	140699	Hs.349125	NM_152503	ENSG00000101353	MROH8	C20orf131|C20orf132	maestro heat like repeat family member 8	protein-coding
46.0667-2	chr3	7696556	7696916	+	0.2	NA	intron (NM_181874, intron 10 of 10)	intron (NM_181874, intron 10 of 10)	-161452	NR_046606	100873937	Hs.570608	NR_046606	ENSG00000236202	GRM7-AS1	-	GRM7 antisense RNA 1	ncRNA
37.3334	chr15	71853383	71853664	+	0.2	NA	intron (NM_006901, intron 35 of 41)	intron (NM_006901, intron 35 of 41)	42969	NM_016346	10002	Hs.187354	NM_014249	ENSG00000278570	NR2E3	ESCS|PNR|RNR|RP37|rd7	nuclear receptor subfamily 2 group E member 3	protein-coding
41.2-2	chr16	4103755	4104049	+	0.2	NA	intron (NM_001116, intron 2 of 10)	Charlie1a|DNA|hAT-Charlie	12540	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding
27.9333-8	chr9	21439819	21440071	+	0.2	NA	promoter-TSS (NM_024013)	promoter-TSS (NM_024013)	-494	NM_024013	3439	Hs.37026	NM_024013	ENSG00000197919	IFNA1	IFL|IFN|IFN-ALPHA|IFN-alphaD|IFNA13|IFNA@	interferon alpha 1	protein-coding
63.5999	chrX	85405418	85405874	+	0.2	NA	Intergenic	L1PA7|LINE|L1	-25981	NM_001307940	79983	Hs.267038	NM_024921	ENSG00000124429	POF1B	POF|POF2B	POF1B actin binding protein	protein-coding
49.8-2	chr12	10775346	10775752	+	0.2	NA	intron (NR_120463, intron 4 of 6)	intron (NR_120463, intron 4 of 6)	25315	NR_120463	101928162	Hs.112950	NR_120463	ENSG00000256888	LINC02366	-	long intergenic non-protein coding RNA 2366	ncRNA
54.3001	chr6	145023653	145023963	+	0.2	NA	Intergenic	Intergenic	618153	NR_132778	106635530		NR_132778		SNORA98	-	small nucleolar RNA, H/ACA box 98	snoRNA
35.7-4	chr17	74550206	74550411	+	0.2	NA	Intergenic	L2a|LINE|L2	-4193	NM_006678	10871	Hs.2605	NM_006678	ENSG00000167850	CD300C	CLM-6|CMRF-35|CMRF-35A|CMRF35|CMRF35-A1|CMRF35A|CMRF35A1|IGSF16|LIR	CD300c molecule	protein-coding
27.0667-7	chr2	224942420	224942631	+	0.2	NA	intron (NM_014689, intron 1 of 55)	intron (NM_014689, intron 1 of 55)	4524	NM_001290263	55619	Hs.46578	NM_014689	ENSG00000135905	DOCK10	DRIP2|Nbla10300|ZIZ3	dedicator of cytokinesis 10	protein-coding
17.2667-6	chr13	104329831	104330033	+	0.2	NA	Intergenic	L1PA7|LINE|L1	904732	NR_126374	104326190	Hs.334381	NR_126374	ENSG00000234551	LINC01309	TCONS_l2_00007459	long intergenic non-protein coding RNA 1309	ncRNA
34.2-5	chr15	68178203	68178459	+	0.2	NA	intron (NM_016166, intron 11 of 13)	intron (NM_016166, intron 11 of 13)	27779	NR_104583	91860	Hs.709550	NM_033429	ENSG00000129007	CALML4	NY-BR-20	calmodulin like 4	protein-coding
41.5333-7	chr5	26959339	26959672	+	0.2	NA	intron (NM_016279, intron 2 of 11)	L1MB5|LINE|L1	79081	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
34.8-2	chr11	47869213	47869456	+	0.2	NA	Intergenic	Intergenic	-20790	NM_001318399	23279	Hs.643526	NM_015231	ENSG00000030066	NUP160	NPHS19	nucleoporin 160	protein-coding
43.2-2	chr15	24895692	24896080	+	0.2	NA	intron (NM_001349456, intron 2 of 12)	intron (NM_001349456, intron 2 of 12)	39374	NM_001349461	6638	Hs.564847	NM_003097	ENSG00000128739	SNRPN	HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N	small nuclear ribonucleoprotein polypeptide N	protein-coding
36.3-2	chr12	118939149	118939398	+	0.2	NA	Intergenic	Charlie8|DNA|hAT-Charlie	-42268	NM_194286	84530	Hs.744964	NM_194286	ENSG00000139767	SRRM4	KIAA1853|MU-MB-2.76|nSR100	serine/arginine repetitive matrix 4	protein-coding
30.8-9	chr4	45424046	45424289	+	0.2	NA	Intergenic	L1PB1|LINE|L1	-697533	NR_073095	132789	Hs.21398	NM_138335	ENSG00000163281	GNPDA2	GNP2|SB52	glucosamine-6-phosphate deaminase 2	protein-coding
32.4667-3	chr2	63597558	63597987	+	0.2	NA	intron (NM_001316374, intron 4 of 8)	intron (NM_001316374, intron 4 of 8)	8621	NM_001199112	4190	Hs.526521	NM_005917	ENSG00000014641	MDH1	HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2	malate dehydrogenase 1	protein-coding
34.1	chr13	94493131	94493464	+	0.2	NA	intron (NM_001322184, intron 1 of 8)	L1ME1|LINE|L1	-13615	NM_001129889	1638	Hs.301865	NM_001922	ENSG00000080166	DCT	TRP-2|TYRP2	dopachrome tautomerase	protein-coding
43.5	chr12	37915683	37916061	+	0.2	NA	Intergenic	ALR/Alpha|Satellite|centr	-400902	NM_001013620	144245	Hs.259305	NM_001013620	ENSG00000175548	ALG10B	ALG10|KCR1	ALG10 alpha-1,2-glucosyltransferase B	protein-coding
35.8667-7	chr8	90286675	90286929	+	0.2	NA	intron (NR_051989, intron 2 of 3)	intron (NR_051989, intron 2 of 3)	65314	NR_051989	100874052	Hs.571514	NR_051989	ENSG00000253394	LINC00534	-	long intergenic non-protein coding RNA 534	ncRNA
56.0667	chr2	49911626	49912099	+	0.2	NA	Intergenic	Intergenic	62341	NM_001320156	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
41.4-3	chr2	102405590	102405839	+	0.2	NA	Intergenic	L1MA6|LINE|L1	-13076	NM_003853	8807	Hs.158315	NM_003853	ENSG00000115607	IL18RAP	ACPL|CD218b|CDw218b|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1R-7|IL-1R7|IL-1RAcPL|IL18RB	interleukin 18 receptor accessory protein	protein-coding
43.4-3	chr20	16680855	16681333	+	0.2	NA	Intergenic	AluSz|SINE|Alu	-48932	NM_003092	6629	Hs.280378	NM_003092	ENSG00000125870	SNRPB2	Msl1|U2B''	small nuclear ribonucleoprotein polypeptide B2	protein-coding
34-8	chr7	55642314	55642709	+	0.2	NA	Intergenic	Intergenic	45521	NR_027340	360132	Hs.446691	NM_182827	ENSG00000176826	FKBP9P1	FKBP9L	FKBP prolyl isomerase 9 pseudogene 1	pseudo
41.9334	chr10	67110921	67111421	+	0.2	NA	intron (NM_001127384, intron 7 of 17)	intron (NM_001127384, intron 7 of 17)	98905	NR_111909	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding
36.9333-7	chr2	75173484	75173774	+	0.2	NA	intron (NM_015727, intron 1 of 3)	intron (NM_015727, intron 1 of 3)	25891	NM_015727	6869	Hs.633301	NM_001058	ENSG00000115353	TACR1	NK1R|NKIR|SPR|TAC1R	tachykinin receptor 1	protein-coding
39.2-3	chr12	128164102	128164560	+	0.2	NA	Intergenic	(CACCAC)n|Simple_repeat|Simple_repeat	46114	NR_104648	101927694	Hs.524849	NR_104648	ENSG00000256659	LINC02368	-	long intergenic non-protein coding RNA 2368	ncRNA
54.5333-2	chr2	214630581	214631054	+	0.2	NA	Intergenic	Intergenic	120635	NR_047698	100885780	Hs.665982	NR_047698	ENSG00000224257	VWC2L-IT1	-	VWC2L intronic transcript 1	ncRNA
20.5-7	chr2	186078837	186079009	+	0.2	NA	intron (NR_110218, intron 3 of 5)	L1MB8|LINE|L1	7394	NR_110218	101927217	Hs.130011	NR_110218	ENSG00000237877	LINC01473	-	long intergenic non-protein coding RNA 1473	ncRNA
42.5	chr13	57137354	57137587	+	0.2	NA	Intergenic	Intergenic	-3448	NM_001130404	729233	Hs.723090	NM_001130404	ENSG00000204918	PRR20B	PRR20|PRR20A|PRR20C|PRR20D|PRR20E	proline rich 20B	protein-coding
20.5-9	chr5	36660179	36660285	+	0.2	NA	intron (NM_004172, intron 3 of 9)	intron (NM_004172, intron 3 of 9)	53626	NM_004172	6507	Hs.481918	NM_004172	ENSG00000079215	SLC1A3	EA6|EAAT1|GLAST|GLAST1	solute carrier family 1 member 3	protein-coding
24.5333-8	chr2	170194089	170194310	+	0.2	NA	intron (NM_001083615, intron 1 of 33)	HAL1b|LINE|L1	16052	NM_138995	140469	Hs.671900	NM_138995	ENSG00000071909	MYO3B	-	myosin IIIB	protein-coding
30.7333-2	chr1	39968121	39968375	+	0.2	NA	intron (NM_032793, intron 11 of 13)	intron (NM_032793, intron 11 of 13)	13103	NM_032793	84879	Hs.655177	NM_032793	ENSG00000168389	MFSD2A	MCPH15|MFSD2|NLS1	major facilitator superfamily domain containing 2A	protein-coding
31.1999-4	chr6	152419349	152419607	+	0.2	NA	intron (NM_182961, intron 40 of 145)	intron (NM_182961, intron 40 of 145)	38948	NR_120501	100505475	Hs.571203	NR_120501		SYNE1-AS1	-	SYNE1 antisense RNA 1	ncRNA
38.7-4	chr2	72796361	72796742	+	0.166667	NA	intron (NR_135774, intron 1 of 19)	L2c|LINE|L2	29482	NR_135774	23233	Hs.303454	NM_015189	ENSG00000144036	EXOC6B	SEC15B|SEC15L2|SEMDJL3	exocyst complex component 6B	protein-coding
16.1-10	chr7	43785834	43785998	+	0.166667	NA	intron (NM_001253823, intron 3 of 8)	L1MEc|LINE|L1	27236	NM_000712	644	Hs.488143	NM_000712	ENSG00000106605	BLVRA	BLVR|BVR|BVRA	biliverdin reductase A	protein-coding
51.0334-3	chr3	119755257	119755827	+	0.166667	NA	intron (NM_033364, intron 17 of 17)	MLT1B|LTR|ERVL-MaLR	-24942	NM_003889	8856	Hs.7303	NM_003889	ENSG00000144852	NR1I2	BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR	nuclear receptor subfamily 1 group I member 2	protein-coding
40.5-8	chr3	46075183	46075541	+	0.166667	NA	Intergenic	L1MD|LINE|L1	-47879	NM_005283	2829	Hs.128375	NM_005283	ENSG00000173578	XCR1	CCXCR1|GPR5	X-C motif chemokine receptor 1	protein-coding
21.2333-2	chr1	218422374	218422555	+	0.166667	NA	intron (NR_138148, intron 2 of 6)	AluJb|SINE|Alu	-15169	NR_031644	100302159		NR_031644	ENSG00000221436	MIR548F3	MIR548F-3|MIRN548F3|hsa-mir-548f-3	microRNA 548f-3	ncRNA
40.6334-2	chr10	57986414	57986790	+	0.166667	NA	Intergenic	AluJr|SINE|Alu	281292	NM_152230	253430	Hs.30280	NM_152230	ENSG00000151151	IPMK	-	inositol polyphosphate multikinase	protein-coding
17.5	chr10	63069368	63069536	+	0.166667	NA	Intergenic	Intergenic	-63795	NM_001282405	29982	Hs.449628	NM_030759	ENSG00000148572	NRBF2	COPR|COPR1|COPR2|NRBF-2	nuclear receptor binding factor 2	protein-coding
35.6-6	chr2	206944999	206945225	+	0.166667	NA	intron (NM_173077, intron 1 of 8)	MIR|SINE|MIR	5594	NM_173077	130749	Hs.684103	NM_173077	ENSG00000144410	CPO	-	carboxypeptidase O	protein-coding
33.8333	chr11	102613768	102614322	+	0.166667	NA	intron (NM_004771, intron 2 of 9)	MIR|SINE|MIR	11287	NM_004771	9313	Hs.591946	NM_004771	ENSG00000137674	MMP20	AI2A2|MMP-20	matrix metallopeptidase 20	protein-coding
23.0667-6	chr14	68624755	68624936	+	0.166667	NA	TTS (NR_135816)	TTS (NR_135816)	3942	NR_135816	100996664		NR_135816		LOC100996664	-	uncharacterized LOC100996664	ncRNA
42.6667-2	chr18	22849927	22850329	+	0.166667	NA	Intergenic	Intergenic	-63291	NR_110782	101927571	Hs.335020	NR_110782	ENSG00000266850	LOC101927571	-	uncharacterized LOC101927571	ncRNA
13.2-2	chr10	128944584	128944736	+	0.166667	NA	Intergenic	Intergenic	31827	NR_148990	728327	Hs.454452	NR_148990	ENSG00000224190	LINC02667	-	long intergenic non-protein coding RNA 2667	ncRNA
56.2666-2	chr4	47140401	47140894	+	0.166667	NA	intron (NM_000812, intron 3 of 8)	intron (NM_000812, intron 3 of 8)	109080	NM_000812	2560	Hs.27283	NM_000812	ENSG00000163288	GABRB1	EIEE45	gamma-aminobutyric acid type A receptor beta1 subunit	protein-coding
15.6667-6	chr5	52550273	52550402	+	0.166667	NA	Intergenic	(AC)n|Simple_repeat|Simple_repeat	-237579	NM_015946	53918	Hs.644352	NM_015946	ENSG00000152684	PELO	CGI-17|PRO1770	pelota mRNA surveillance and ribosome rescue factor	protein-coding
32.1001	chr2	238942321	238942593	+	0.166667	NA	Intergenic	Intergenic	-16188	NR_034162	401039	Hs.516791	NM_001001698	ENSG00000227744	LINC01940	-	long intergenic non-protein coding RNA 1940	ncRNA
31.8334-2	chr8	82404994	82405204	+	0.166667	NA	Intergenic	Intergenic	-507005	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
38.7667-4	chr9	129253177	129253569	+	0.166667	NA	Intergenic	Intergenic	-29043	NR_121587	101929331	Hs.522428	NR_121587	ENSG00000224307	LOC101929331	-	uncharacterized LOC101929331	ncRNA
29.6334	chr10	44305294	44305631	+	0.166667	NA	Intergenic	L1MA4|LINE|L1	12712	NM_001258000	100130539	Hs.694626	NM_001258000	ENSG00000277288	C10orf142	-	chromosome 10 open reading frame 142	protein-coding
34-10	chr9	28088103	28088487	+	0.166667	NA	intron (NM_152570, intron 5 of 6)	intron (NM_152570, intron 5 of 6)	-514429	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
28.7667-6	chr8	76675464	76675770	+	0.166667	NA	intron (NR_024360, intron 1 of 3)	intron (NR_024360, intron 1 of 3)	-5630	NM_024721	79776	Hs.458973	NM_024721	ENSG00000091656	ZFHX4	ZFH4|ZHF4	zinc finger homeobox 4	protein-coding
29.4667-10	chr9	36692601	36692943	+	0.166667	NA	Intergenic	L1MC2|LINE|L1	119877	NM_014791	9833	Hs.184339	NM_014791	ENSG00000165304	MELK	HPK38	maternal embryonic leucine zipper kinase	protein-coding
45.4001	chr9	132472528	132472950	+	0.166667	NA	intron (NM_001282957, intron 1 of 5)	AluJr|SINE|Alu	62528	NM_001282957	389799	Hs.201709	NM_207417	ENSG00000188523	CFAP77	C9orf171	cilia and flagella associated protein 77	protein-coding
27-23	chr8	86598104	86598568	+	0.166667	NA	intron (NM_019098, intron 15 of 17)	L2a|LINE|L2	83901	NM_003909	8895	Hs.191219	NM_003909	ENSG00000085719	CPNE3	CPN3|PRO1071	copine 3	protein-coding
28.5667-5	chr17	6941760	6942074	+	0.166667	NA	Intergenic	AluSp|SINE|Alu	48140	NR_120453	245	Hs.378695	NR_002710	ENSG00000262943	ALOX12P2	ALOX12E	arachidonate 12-lipoxygenase pseudogene 2	pseudo
29.7667-7	chr7	104309039	104309218	+	0.166667	NA	Intergenic	L1ME3A|LINE|L1	-19528	NM_199000	375612	Hs.659164	NM_199000	ENSG00000187416	LHFPL3	LHFPL4	LHFPL tetraspan subfamily member 3	protein-coding
26.9-14	chr5	160061608	160061833	+	0.166667	NA	intron (NM_003314, intron 7 of 7)	intron (NM_003314, intron 7 of 7)	52581	NM_003314	7265	Hs.519718	NM_003314	ENSG00000113312	TTC1	TPR1	tetratricopeptide repeat domain 1	protein-coding
65.9668	chr1	66366440	66366878	+	0.166667	NA	intron (NM_001037339, intron 6 of 9)	intron (NM_001037339, intron 6 of 9)	12124	NM_001297442	5142	Hs.198072	NM_002600	ENSG00000184588	PDE4B	DPDE4|PDEIVB	phosphodiesterase 4B	protein-coding
31.5333-4	chr20	62881173	62881397	+	0.166667	NA	exon (NM_001193369, exon 16 of 16)	exon (NM_001193369, exon 16 of 16)	1618	NR_145839	109623463		NR_145839		SNORA117	-	small nucleolar RNA, H/ACA box 117	snoRNA
39.2-8	chr5	119343714	119344035	+	0.166667	NA	intron (NM_001286814, intron 1 of 1)	Chap1_Mam|DNA|hAT-Charlie	10699	NM_001286814	25816	Hs.618488	NM_014350	ENSG00000145779	TNFAIP8	GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2	TNF alpha induced protein 8	protein-coding
56.6334	chr16	35939338	35939870	+	0.166667	NA	Intergenic	ALR/Alpha|Satellite|centr	193052	NR_033985	400533	Hs.499135	NR_033985	ENSG00000261122	LINC02167	-	long intergenic non-protein coding RNA 2167	ncRNA
30.7333-8	chr3	195550693	195550978	+	0.166667	NA	Intergenic	Intergenic	-7510	NR_133014	5504	Hs.535731	NM_006241	ENSG00000184203	PPP1R2	IPP-2|IPP2|PPP1R2A	protein phosphatase 1 regulatory inhibitor subunit 2	protein-coding
47.4667-2	chr6	1323689	1324082	+	0.166667	NA	Intergenic	Intergenic	11787	NM_033260	94234	Hs.591352	NM_033260	ENSG00000164379	FOXQ1	HFH1	forkhead box Q1	protein-coding
41.8666-8	chr5	106244586	106244871	+	0.166667	NA	Intergenic	Tigger19a|DNA|TcMar-Tigger	766286	NR_104671	102467213	Hs.570923	NR_104671	ENSG00000251027	LINC01950	-	long intergenic non-protein coding RNA 1950	ncRNA
38.9667-8	chr9	30842407	30842763	+	0.166667	NA	Intergenic	L1M4a2|LINE|L1	-434131	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
58.4667	chr21	24605240	24606121	+	0.166667	NA	Intergenic	L2a|LINE|L2	176940	NR_135520	105372751	Hs.652040	NR_135519	ENSG00000237484	LINC01684	lnc-JAM2-6	long intergenic non-protein coding RNA 1684	ncRNA
56.5-2	chr7	10692728	10693252	+	0.166667	NA	intron (NR_147499, intron 1 of 2)	intron (NR_147499, intron 1 of 2)	-9686	NR_149037	100131472	Hs.170681	NR_149037		LOC100131472	-	uncharacterized LOC100131472	ncRNA
35.6-4	chr13	98730416	98731005	+	0.166667	NA	intron (NM_005073, intron 1 of 22)	intron (NM_005073, intron 1 of 22)	21962	NM_005073	6564	Hs.436893	NM_005073	ENSG00000088386	SLC15A1	HPECT1|HPEPT1|PEPT1	solute carrier family 15 member 1	protein-coding
30.3667-5	chr2	72050357	72050685	+	0.166667	NA	Intergenic	L1M5|LINE|L1	97341	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
27.3333-3	chr15	97034549	97034792	+	0.166667	NA	Intergenic	L1MD1|LINE|L1	251235	NR_158221	145946	Hs.326528	NM_173499	ENSG00000185594	SPATA8	SRG8	spermatogenesis associated 8	ncRNA
64.0332	chr21	29761610	29762305	+	0.166667	NA	intron (NR_027021, intron 4 of 4)	AluSq2|SINE|Alu	13782	NR_027021	642976	Hs.473554	NR_027021		GRIK1-AS1	C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110	GRIK1 antisense RNA 1	ncRNA
52.8-3	chr20	62293198	62293613	+	0.166667	NA	intron (NM_001363878, intron 14 of 14)	intron (NM_001363878, intron 14 of 14)	-9491	NM_001281437	11047	Hs.90107	NM_007002	ENSG00000130706	ADRM1	ARM-1|ARM1|GP110	adhesion regulating molecule 1	protein-coding
32.8334-3	chr5	3237043	3237276	+	0.166667	NA	Intergenic	Intergenic	59324	NR_104617	102467074	Hs.575250	NR_104617	ENSG00000249808	LINC01377	-	long intergenic non-protein coding RNA 1377	ncRNA
28.9667-8	chr6	49837086	49837379	+	0.166667	NA	intron (NM_170609, intron 6 of 6)	intron (NM_170609, intron 6 of 6)	-12466	NR_110843	101927048	Hs.742154	NR_110843		LOC101927048	-	uncharacterized LOC101927048	ncRNA
34.7-7	chr3	38164126	38164503	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	-1223	NM_005109	9943	Hs.475970	NM_005109	ENSG00000172939	OXSR1	OSR1	oxidative stress responsive kinase 1	protein-coding
25.2	chr10	57052486	57052908	+	0.166667	NA	Intergenic	L1PA16|LINE|L1	251862	NR_037490	100500834		NR_037490	ENSG00000264747	MIR3924	-	microRNA 3924	ncRNA
23.7-13	chrUn_GL000216v2	66484	66752	+	0.166667	NA	NA	(TTCCATTCCA)n|Simple_repeat|Simple_repeat	NA	NA								
26.0334-2	chr4	57733703	57734019	+	0.166667	NA	Intergenic	Intergenic	307989	NR_125907	101928851	Hs.555072	NR_125907	ENSG00000248505	LINC02380	-	long intergenic non-protein coding RNA 2380	ncRNA
54.9666-4	chr2	188724977	188725707	+	0.166667	NA	Intergenic	Intergenic	64781	NR_161166	116093	Hs.470892	NM_052952	ENSG00000174325	DIRC1	-	disrupted in renal carcinoma 1	ncRNA
16.6667-16	chrX	78393036	78393200	+	0.166667	NA	Intergenic	L1MA2|LINE|L1	-65427	NM_001282186	10800	Hs.733809	NM_006639	ENSG00000173198	CYSLTR1	CYSLT1|CYSLT1R|CYSLTR|HMTMF81	cysteinyl leukotriene receptor 1	protein-coding
50.6667	chr13	82610830	82611282	+	0.166667	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	1271337	NM_052910	114798	Hs.415478	NM_052910	ENSG00000178235	SLITRK1	LRRC12|TTM	SLIT and NTRK like family member 1	protein-coding
20.7666	chr1	115854285	115854482	+	0.166667	NA	Intergenic	L1MA4|LINE|L1	-13257	NM_005599	4808	Hs.46296	NM_005599	ENSG00000177551	NHLH2	HEN2|NSCL2|bHLHa34	nescient helix-loop-helix 2	protein-coding
24.9667-8	chr2	184239642	184239936	+	0.166667	NA	Intergenic	Intergenic	-139186	NR_039638	100616305		NR_039638	ENSG00000266808	MIR548AE1	-	microRNA 548ae-1	ncRNA
36.6667-4	chr5	127330561	127330870	+	0.166667	NA	intron (NM_001308119, intron 2 of 14)	intron (NM_001308119, intron 2 of 14)	39919	NM_001256545	84466	Hs.438709	NM_032446	ENSG00000145794	MEGF10	EMARDD	multiple EGF like domains 10	protein-coding
47.8001	chr8	66759490	66759979	+	0.166667	NA	intron (NM_001033578, intron 1 of 16)	AluY|SINE|Alu	8300	NR_002734	26255	Hs.647156	NR_002734	ENSG00000213005	PTTG3P	PTTG3|rcPTTG1	pituitary tumor-transforming 3, pseudogene	pseudo
33.1-9	chr8	113538918	113539247	+	0.166667	NA	Intergenic	Intergenic	-102143	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
66.9001	chr9	36194989	36195579	+	0.166667	NA	intron (NM_001311204, intron 1 of 4)	intron (NM_001311204, intron 1 of 4)	4363	NM_001833	1211	Hs.522114	NM_001833	ENSG00000122705	CLTA	LCA	clathrin light chain A	protein-coding
30.9-7	chr15	92609037	92609430	+	0.166667	NA	Intergenic	Intergenic	-36970	NR_021493	100144604	Hs.245476	NR_021493	ENSG00000258647	LINC00930	-	long intergenic non-protein coding RNA 930	ncRNA
37.6667-2	chr15	60008399	60008821	+	0.166667	NA	Intergenic	Intergenic	4299	NM_012182	27023	Hs.734475	NM_012182	ENSG00000171956	FOXB1	FKH5|HFKH-5	forkhead box B1	protein-coding
34.4334-3	chr14	68113489	68113731	+	0.166667	NA	intron (NM_133509, intron 7 of 10)	intron (NM_133509, intron 7 of 10)	290018	NM_001321815	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
47.0333-2	chr4	87130511	87131132	+	0.166667	NA	intron (NM_005935, intron 15 of 19)	intron (NM_005935, intron 15 of 19)	89447	NM_001292003	57563	Hs.106601	NM_020803	ENSG00000145332	KLHL8	-	kelch like family member 8	protein-coding
27.8666-4	chr5	59349602	59350067	+	0.166667	NA	intron (NM_001165899, intron 3 of 16)	intron (NM_001165899, intron 3 of 16)	7136	NM_001197219	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
31.3-6	chr2	67390113	67390443	+	0.166667	NA	Intergenic	L3b|LINE|CR1	-7055	NM_019002	54465	Hs.353022	NM_019002	ENSG00000143971	ETAA1	ETAA16	ETAA1 activator of ATR kinase	protein-coding
43.5001-2	chr5	121332518	121332809	+	0.166667	NA	Intergenic	Intergenic	10113	NR_104999	102467226		NR_104999		LOC102467226	-	uncharacterized LOC102467226	ncRNA
43.1667	chr10	131561917	131562318	+	0.166667	NA	Intergenic	Intergenic	228082	NR_038365	399827	Hs.523353	NM_001001677	ENSG00000189275	LINC01164	-	long intergenic non-protein coding RNA 1164	ncRNA
22.9-10	chr3	34999651	35000013	+	0.166667	NA	intron (NR_110817, intron 2 of 3)	L1MDa|LINE|L1	394191	NR_110817	101928135	Hs.550715	NR_110817		LOC101928135	-	uncharacterized LOC101928135	ncRNA
20.5334-3	chr3	67420840	67421024	+	0.166667	NA	intron (NM_001177599, intron 9 of 10)	intron (NM_001177599, intron 9 of 10)	195468	NR_036234	100422941		NR_036234	ENSG00000283298	MIR4272	-	microRNA 4272	ncRNA
40.2667-4	chr20	62400598	62400976	+	0.166667	NA	intron (NM_031215, intron 1 of 9)	intron (NM_031215, intron 1 of 9)	6496	NM_031215	81928	Hs.301040	NM_031215	ENSG00000149679	CABLES2	C20orf150|dJ908M14.2|ik3-2	Cdk5 and Abl enzyme substrate 2	protein-coding
13.6667-8	chr8	81719707	81719843	+	0.166667	NA	intron (NR_033195, intron 1 of 6)	intron (NR_033195, intron 1 of 6)	1525	NM_024699	79752	Hs.655453	NM_024699	ENSG00000104231	ZFAND1	-	zinc finger AN1-type containing 1	protein-coding
20.8333-10	chr21	32026221	32026430	+	0.166667	NA	Intergenic	LTR102_Mam|LTR|ERVL	59970	NR_038033	100551499	Hs.224449	NR_038033		LINC00159	C21orf44|NCRNA00159	long intergenic non-protein coding RNA 159	ncRNA
21.7667-2	chr10	105062543	105062761	+	0.166667	NA	intron (NM_014978, intron 5 of 26)	intron (NM_014978, intron 5 of 26)	-396436	NR_104028	100505890	Hs.348526	NR_104028	ENSG00000226387	SORCS3-AS1	-	SORCS3 antisense RNA 1	ncRNA
25.7333-10	chr5	102225195	102225409	+	0.166667	NA	Intergenic	Intergenic	70982	NM_180991	353189	Hs.127648	NM_180991	ENSG00000173930	SLCO4C1	OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20	solute carrier organic anion transporter family member 4C1	protein-coding
14.3667-2	chr14	56257038	56257196	+	0.166667	NA	intron (NM_021255, intron 2 of 5)	intron (NM_021255, intron 2 of 5)	138706	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding
40.9	chr12	6563718	6564020	+	0.166667	NA	intron (NM_001033714, intron 6 of 15)	intron (NM_001033714, intron 6 of 15)	4422	NM_001258309	4839	Hs.534334	NM_006170	ENSG00000111641	NOP2	NOL1|NOP120|NSUN1|p120	NOP2 nucleolar protein	protein-coding
57.8666	chr16	79799529	79800072	+	0.166667	NA	TTS (NR_104661)	TTS (NR_104661)	4551	NR_104661	101928248	Hs.659802	NR_104660	ENSG00000260876	LINC01229	-	long intergenic non-protein coding RNA 1229	ncRNA
41.4001	chr5	19154781	19155246	+	0.166667	NA	Intergenic	L1M4|LINE|L1	731259	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
54.1-2	chr7	25008060	25008542	+	0.166667	NA	Intergenic	Intergenic	-28123	NM_015550	26031	Hs.520259	NM_015550	ENSG00000070882	OSBPL3	ORP-3|ORP3|OSBP3	oxysterol binding protein like 3	protein-coding
35.3333-7	chr17	20846977	20847229	+	0.166667	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-21424	NR_160710	440416	Hs.661076	NR_104185	ENSG00000233098	CCDC144NL-AS1	-	CCDC144NL antisense RNA 1	ncRNA
29.7333	chr1	68244941	68245310	+	0.166667	NA	Intergenic	MIR|SINE|MIR	-12579	NM_001193334	79971	Hs.647659	NM_024911	ENSG00000116729	WLS	C1orf139|EVI|GPR177|MRP|mig-14	Wnt ligand secretion mediator	protein-coding
28.6-17	chr20	24074113	24074443	+	0.166667	NA	Intergenic	Intergenic	-85499	NM_178311	92086	Hs.355394	NM_080920	ENSG00000149435	GGTLC1	GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2	gamma-glutamyltransferase light chain 1	protein-coding
29.9-5	chr4	159084628	159085213	+	0.166667	NA	Intergenic	MamTip1|DNA|hAT-Tip100	-19131	NM_001351724	9693	Hs.744884	NM_014247	ENSG00000109756	RAPGEF2	CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP	Rap guanine nucleotide exchange factor 2	protein-coding
64.0001	chr17	69725821	69726391	+	0.166667	NA	intron (NR_109972, intron 3 of 4)	intron (NR_109972, intron 3 of 4)	132119	NR_109971	101928122	Hs.579342	NR_109971	ENSG00000227517	LINC01483	-	long intergenic non-protein coding RNA 1483	ncRNA
54.9-2	chr13	50451436	50452021	+	0.166667	NA	intron (NR_109974, intron 4 of 6)	LTR67B|LTR|ERVL	75721	NR_125753	103689915	Hs.722230	NR_125753	ENSG00000186047	DLEU1-AS1	LINC01308	DLEU1 antisense RNA 1	ncRNA
54.8333	chr2	19998094	19998530	+	0.166667	NA	intron (NM_002381, intron 5 of 7)	intron (NM_002381, intron 5 of 7)	8108	NR_110235	101928222	Hs.6985	NR_110235		LOC101928222	-	uncharacterized LOC101928222	ncRNA
29.7667-2	chr11	82179603	82180125	+	0.166667	NA	intron (NR_120571, intron 3 of 7)	intron (NR_120571, intron 3 of 7)	224049	NR_120571	101928989	Hs.145117	NR_120571	ENSG00000245832	MIR4300HG	-	MIR4300 host gene	ncRNA
39.0666-3	chr6	94249583	94250130	+	0.166667	NA	Intergenic	Intergenic	531553	NR_152795	643432	Hs.509936	NR_015362		TSG1	-	tumor suppressor TSG1	ncRNA
23.5667-5	chr17	61666965	61667164	+	0.166667	NA	Intergenic	Intergenic	-75845	NM_199290	342538	Hs.591178	NM_199290	ENSG00000253506	NACA2	ANAC|NACAL	nascent polypeptide associated complex subunit alpha 2	protein-coding
41.4-7	chr8	47438766	47439279	+	0.166667	NA	intron (NM_001080394, intron 7 of 19)	intron (NM_001080394, intron 7 of 19)	178084	NM_001080394	23514	Hs.381058	NM_001080394	ENSG00000164808	SPIDR	KIAA0146	scaffold protein involved in DNA repair	protein-coding
32.1-6	chr2	131135815	131136080	+	0.166667	NA	intron (NM_001267064, intron 6 of 7)	intron (NM_001267064, intron 6 of 7)	31100	NM_001100623	55041	Hs.469944	NM_017958	ENSG00000115762	PLEKHB2	EVT2	pleckstrin homology domain containing B2	protein-coding
16.7667-5	chr22	27566994	27567183	+	0.166667	NA	Intergenic	Intergenic	234668	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	MN1 proto-oncogene, transcriptional regulator	protein-coding
13.2667-4	chr18	22595120	22595202	+	0.166667	NA	Intergenic	Intergenic	-177246	NM_172241	64693	Hs.406709	NM_022663	ENSG00000212710	CTAGE1	CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2	cutaneous T cell lymphoma-associated antigen 1	protein-coding
32.5667-3	chr13	77014128	77014370	+	0.166667	NA	intron (NM_012158, intron 4 of 4)	intron (NM_012158, intron 4 of 4)	12910	NM_012158	26224	Hs.508284	NM_012158	ENSG00000005812	FBXL3	FBL3|FBL3A|FBXL3A|IDDSFAS	F-box and leucine rich repeat protein 3	protein-coding
23.8333-7	chr5	9465093	9465368	+	0.166667	NA	intron (NM_003966, intron 1 of 22)	MER5A|DNA|hAT-Charlie	-46103	NR_109935	101929338	Hs.675861	NR_109935	ENSG00000251370	SEMA5A-AS1	CTD-2201E9.1	SEMA5A antisense RNA 1	ncRNA
45.0333-3	chr7	38615659	38616348	+	0.166667	NA	intron (NM_001635, intron 1 of 20)	intron (NM_001635, intron 1 of 20)	15370	NM_001635	273	Hs.592182	NM_001635	ENSG00000078053	AMPH	AMPH1	amphiphysin	protein-coding
24.9-11	chr6	70313696	70313890	+	0.166667	NA	Intergenic	L2b|LINE|L2	-10709	NM_001851	1297	Hs.590892	NM_001851	ENSG00000112280	COL9A1	DJ149L1.1.2|EDM6|MED|STL4	collagen type IX alpha 1 chain	protein-coding
48.4333-2	chr19	45149933	45150325	+	0.166667	NA	3' UTR (NM_198478, exon 4 of 4)	3' UTR (NM_198478, exon 4 of 4)	10021	NM_198478	284353	Hs.299256	NM_198478		NKPD1	-	NTPase KAP family P-loop domain containing 1	protein-coding
30.6-5	chr15	62970452	62971017	+	0.166667	NA	Intergenic	L1MC4a|LINE|L1	-72013	NM_001365777	7168	Hs.133892	NM_000366	ENSG00000140416	TPM1	C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA	tropomyosin 1	protein-coding
29.6666-2	chr12	22810310	22810643	+	0.166667	NA	Intergenic	Intergenic	185305	NM_001039481	55500	Hs.29464	NM_018638	ENSG00000139163	ETNK1	EKI|EKI 1|EKI1|Nbla10396	ethanolamine kinase 1	protein-coding
36.3667-5	chr9	70989938	70990240	+	0.166667	NA	intron (NM_001366143, intron 1 of 25)	MIR|SINE|MIR	-121037	NM_024971	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding
32.0667-6	chr8	115547781	115548059	+	0.166667	NA	intron (NM_001282902, intron 4 of 5)	intron (NM_001282902, intron 4 of 5)	120093	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
22.4667-13	chr9	88017193	88017622	+	0.166667	NA	Intergenic	HAL1|LINE|L1	-42627	NM_001039803	23552	Hs.522274	NM_012119	ENSG00000156345	CDK20	CCRK|CDCH|P42|PNQALRE	cyclin dependent kinase 20	protein-coding
37.7-8	chr8	21594912	21595160	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	193839	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding
60.1001	chr8	100569586	100570232	+	0.166667	NA	Intergenic	MER21-int|LTR|ERVL	-10150	NM_001270379	157567	Hs.530199	NM_198401	ENSG00000186106	ANKRD46	ANK-S|GENX-115279	ankyrin repeat domain 46	protein-coding
33.7667-8	chr8	77011006	77011315	+	0.166667	NA	Intergenic	Intergenic	-10116	NM_001172086	5828	Hs.437966	NM_000318	ENSG00000164751	PEX2	PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3	peroxisomal biogenesis factor 2	protein-coding
52.2333	chr10	105957735	105958091	+	0.166667	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-137580	NR_120625	101927549	Hs.556885	NR_120625		LINC02627	-	long intergenic non-protein coding RNA 2627	ncRNA
60.2668	chr9	3000032	3000473	+	0.166667	NA	Intergenic	Intergenic	-156157	NM_014878	9933	Hs.493309	NM_014878	ENSG00000080608	PUM3	HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5	pumilio RNA binding family member 3	protein-coding
27.6-18	chr9	2173334	2173525	+	0.166667	NA	intron (NM_003070, intron 29 of 33)	intron (NM_003070, intron 29 of 33)	14973	NM_001289400	6595	Hs.298990	NM_003070	ENSG00000080503	SMARCA2	BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
30.2-6	chr2	165555299	165555493	+	0.166667	NA	intron (NM_001172173, intron 3 of 6)	MIR|SINE|MIR	-16940	NM_024969	80034	Hs.470479	NM_024969	ENSG00000178662	CSRNP3	FAM130A2|PPP1R73|TAIP-2|TAIP2	cysteine and serine rich nuclear protein 3	protein-coding
19-14	chr3	185774544	185774702	+	0.166667	NA	intron (NR_138486, intron 2 of 15)	intron (NR_138486, intron 2 of 15)	-6719	NR_049838	100847078		NR_049838	ENSG00000265470	MIR548AQ	-	microRNA 548aq	ncRNA
65.7-2	chr18	59532169	59532767	+	0.166667	NA	intron (NM_133459, intron 2 of 10)	intron (NM_133459, intron 2 of 10)	164955	NM_133459	147372	Hs.34333	NM_133459	ENSG00000183287	CCBE1	HKLLS1	collagen and calcium binding EGF domains 1	protein-coding
41.9334-5	chr3	105400199	105400596	+	0.166667	NA	intron (NM_001243280, intron 1 of 14)	intron (NM_001243280, intron 1 of 14)	33488	NM_001627	214	Hs.591293	NM_001627	ENSG00000170017	ALCAM	CD166|MEMD	activated leukocyte cell adhesion molecule	protein-coding
26.7667	chr10	29060873	29061110	+	0.166667	NA	Intergenic	AluSz|SINE|Alu	214583	NM_001278522	283080		NM_001278522		C10orf126	bA492M23.1	chromosome 10 open reading frame 126	protein-coding
24.1-2	chr17	81364090	81364234	+	0.166667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	20963	NM_001347841	100130370	Hs.646594	NM_001272086		LOC100130370	-	uncharacterized LOC100130370	protein-coding
24.9667-5	chr14	33014852	33015046	+	0.166667	NA	intron (NM_001165893, intron 1 of 10)	L3|LINE|CR1	76070	NM_001164749	64067	Hs.657892	NM_022123	ENSG00000151322	NPAS3	MOP6|PASD6|bHLHe12	neuronal PAS domain protein 3	protein-coding
39.9334-2	chr8	107774487	107774968	+	0.166667	NA	Intergenic	Intergenic	-276809	NM_001146	284	Hs.369675	NM_001146	ENSG00000154188	ANGPT1	AGP1|AGPT|ANG1	angiopoietin 1	protein-coding
30.5-13	chr7	82576686	82576887	+	0.166667	NA	Intergenic	Intergenic	-132830	NM_001366867	781	Hs.282151	NM_000722	ENSG00000153956	CACNA2D1	CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3	calcium voltage-gated channel auxiliary subunit alpha2delta 1	protein-coding
44.5667-2	chr4	44980371	44981025	+	0.166667	NA	Intergenic	Intergenic	-254064	NR_073095	132789	Hs.21398	NM_138335	ENSG00000163281	GNPDA2	GNP2|SB52	glucosamine-6-phosphate deaminase 2	protein-coding
31.6666-4	chr2	138067000	138067308	+	0.166667	NA	Intergenic	L2a|LINE|L2	-34730	NR_135526	105373635		NR_135526	ENSG00000224231	LINC01832	-	long intergenic non-protein coding RNA 1832	ncRNA
21.4333-3	chr1	168698770	168698991	+	0.166667	NA	intron (NM_001937, intron 3 of 3)	intron (NM_001937, intron 3 of 3)	30326	NM_001937	1805	Hs.80552	NM_001937	ENSG00000143196	DPT	TRAMP	dermatopontin	protein-coding
39-7	chr3	119929755	119930087	+	0.166667	NA	intron (NM_002093, intron 3 of 11)	AluJb|SINE|Alu	147211	NM_022002	8856	Hs.7303	NM_003889	ENSG00000144852	NR1I2	BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR	nuclear receptor subfamily 1 group I member 2	protein-coding
40.5333-10	chr8	133178173	133178509	+	0.166667	NA	Intergenic	L1M5|LINE|L1	-12698	NM_001204869	8840	Hs.492974	NM_003882	ENSG00000104415	CCN4	WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc	cellular communication network factor 4	protein-coding
28.9667	chr10	61870231	61870539	+	0.166667	NA	Intergenic	Intergenic	-31314	NM_032199	84159	Hs.535297	NM_032199	ENSG00000150347	ARID5B	DESRT|MRF-2|MRF2	AT-rich interaction domain 5B	protein-coding
18.7333-20	chr7	43950151	43950291	+	0.166667	NA	intron (NM_015983, intron 5 of 6)	MIRc|SINE|MIR	23785	NM_015983	51619	Hs.19196	NM_015983	ENSG00000078967	UBE2D4	HBUCE1	ubiquitin conjugating enzyme E2 D4 (putative)	protein-coding
22.3333-2	chr10	99203278	99203516	+	0.166667	NA	intron (NM_021828, intron 2 of 11)	L1MA8|LINE|L1	32478	NM_001166244	60495	Hs.500750	NM_021828	ENSG00000172987	HPSE2	HPA2|HPR2|UFS|UFS1	heparanase 2 (inactive)	protein-coding
34-7	chr6	36767541	36767888	+	0.166667	NA	intron (NM_020939, intron 10 of 20)	intron (NM_020939, intron 10 of 20)	-10305	NM_001314018	57699	Hs.372129	NM_020939	ENSG00000124772	CPNE5	COPN5|CPN5	copine 5	protein-coding
26.2-23	chr8	33066843	33067088	+	0.166667	NA	Intergenic	L1PA13|LINE|L1	345130	NM_001322197	3084	Hs.453951	NM_004495	ENSG00000157168	NRG1	ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF	neuregulin 1	protein-coding
23.7334	chr2	43068791	43068967	+	0.166667	NA	Intergenic	L2a|LINE|L2	-29336	NR_110585	102723854	Hs.570165	NR_110585	ENSG00000231826	LINC01819	-	long intergenic non-protein coding RNA 1819	ncRNA
14.5334	chr6	55201769	55201888	+	0.166667	NA	intron (NM_001526, intron 2 of 7)	intron (NM_001526, intron 2 of 7)	95368	NM_001526	3062	Hs.151624	NM_001526	ENSG00000137252	HCRTR2	OX2R	hypocretin receptor 2	protein-coding
32.1-2	chr13	82181511	82181939	+	0.166667	NA	Intergenic	Intergenic	-954742	NR_047494	100861546	Hs.539621	NR_047494	ENSG00000260094	LINC00564	-	long intergenic non-protein coding RNA 564	ncRNA
32.4667-4	chr4	86619271	86619744	+	0.166667	NA	intron (NM_080685, intron 1 of 47)	intron (NM_080685, intron 1 of 47)	25192	NM_080685	5783	Hs.436142	NM_006264	ENSG00000163629	PTPN13	FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E	protein tyrosine phosphatase non-receptor type 13	protein-coding
58.2333	chr15	24704839	24705361	+	0.166667	NA	Intergenic	MER34-int|LTR|ERV1	29706	NM_018958	23742	Hs.649663	NM_018958	ENSG00000185823	NPAP1	C15orf2	nuclear pore associated protein 1	protein-coding
53.5333-2	chr5	158711761	158712196	+	0.166667	NA	intron (NM_001364155, intron 13 of 14)	intron (NM_001364155, intron 13 of 14)	-302205	NR_109888	101927697	Hs.483960	NR_109888	ENSG00000276778	LINC02227	-	long intergenic non-protein coding RNA 2227	ncRNA
25.3667-6	chr8	109632221	109632403	+	0.166667	NA	intron (NM_001099746, intron 1 of 5)	AluSq2|SINE|Alu	10878	NM_001099756	55638	Hs.390738	NM_017786	ENSG00000147642	SYBU	GOLSYN|OCSYN|SNPHL	syntabulin	protein-coding
43.6667-2	chr2	29740286	29740639	+	0.166667	NA	intron (NM_004304, intron 1 of 28)	(AGAC)n|Simple_repeat|Simple_repeat	181124	NM_004304	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	ALK receptor tyrosine kinase	protein-coding
20.2333	chr1	41848150	41848309	+	0.166667	NA	non-coding (NR_038260, exon 3 of 3)	non-coding (NR_038260, exon 3 of 3)	70693	NM_001127714	59269	Hs.403972	NM_024503	ENSG00000127124	HIVEP3	KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C	human immunodeficiency virus type I enhancer binding protein 3	protein-coding
9.43335	chr5	11824868	11824958	+	0.166667	NA	intron (NM_001288717, intron 1 of 20)	L1ME1|LINE|L1	79533	NR_109988	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
27.3667-7	chr5	101391575	101391793	+	0.166667	NA	Intergenic	L2a|LINE|L2	-488402	NM_175052	7903	Hs.308628	NM_005668	ENSG00000113532	ST8SIA4	PST|PST1|SIAT8D|ST8SIA-IV	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	protein-coding
28.7334	chr2	75180021	75180201	+	0.166667	NA	intron (NM_015727, intron 1 of 3)	L2a|LINE|L2	19409	NM_015727	6869	Hs.633301	NM_001058	ENSG00000115353	TACR1	NK1R|NKIR|SPR|TAC1R	tachykinin receptor 1	protein-coding
42.7999-2	chr9	32841462	32841855	+	0.166667	NA	Intergenic	L2b|LINE|L2	58118	NM_212558	401498	Hs.522063	NM_212558	ENSG00000188133	TMEM215	-	transmembrane protein 215	protein-coding
35.4-9	chr9	134484609	134484957	+	0.166667	NA	Intergenic	MLT1J1|LTR|ERVL-MaLR	78223	NM_001291921	6256	Hs.590886	NM_002957	ENSG00000186350	RXRA	NR2B1	retinoid X receptor alpha	protein-coding
26.3-3	chr10	99113123	99113316	+	0.166667	NA	intron (NM_021828, intron 3 of 11)	MIR|SINE|MIR	122656	NM_001166244	60495	Hs.500750	NM_021828	ENSG00000172987	HPSE2	HPA2|HPR2|UFS|UFS1	heparanase 2 (inactive)	protein-coding
26.1334	chr20	51705449	51705816	+	0.166667	NA	intron (NM_006045, intron 4 of 27)	intron (NM_006045, intron 4 of 27)	62758	NM_006045	10079	Hs.649234	NM_006045	ENSG00000054793	ATP9A	ATPIIA	ATPase phospholipid transporting 9A (putative)	protein-coding
29.6-10	chr2	186697604	186697911	+	0.166667	NA	intron (NM_177454, intron 1 of 7)	intron (NM_177454, intron 1 of 7)	3697	NM_177454	165215	Hs.28872	NM_177454	ENSG00000144369	FAM171B	KIAA1946	family with sequence similarity 171 member B	protein-coding
51.0334-2	chr2	83959066	83959484	+	0.166667	NA	Intergenic	L1ME4a|LINE|L1	-331407	NR_003663	388965	Hs.664098	NM_001013648		FUNDC2P2	-	FUN14 domain containing 2 pseudogene 2	pseudo
15.1333-6	chr12	110010354	110010552	+	0.166667	NA	intron (NM_033121, intron 1 of 14)	intron (NM_033121, intron 1 of 14)	11023	NM_033121	88455	Hs.528703	NM_033121	ENSG00000076513	ANKRD13A	ANKRD13|NY-REN-25	ankyrin repeat domain 13A	protein-coding
34.5-10	chr9	76006330	76006700	+	0.166667	NA	intron (NR_120409, intron 3 of 19)	L1MC4a|LINE|L1	115842	NM_006200	5125	Hs.368542	NM_006200	ENSG00000099139	PCSK5	PC5|PC6|PC6A|SPC6	proprotein convertase subtilisin/kexin type 5	protein-coding
52.9001	chr12	105557954	105558306	+	0.166667	NA	Intergenic	Intergenic	-146073	NR_110108	101929110	Hs.145944	NR_110108	ENSG00000257859	CASC18	-	cancer susceptibility 18	ncRNA
56.0668	chr2	18724141	18724577	+	0.166667	NA	Intergenic	Intergenic	-134779	NM_001199104	100526794	Hs.744358	NM_001199103	ENSG00000250741	NT5C1B-RDH14	AIRP|NT5C1B|cN-IB|cN1B	NT5C1B-RDH14 readthrough	protein-coding
49.7-3	chr7	2011025	2011491	+	0.166667	NA	intron (NM_001013837, intron 13 of 18)	intron (NM_001013837, intron 13 of 18)	-70687	NM_001304525	8379	Hs.654838	NM_003550	ENSG00000002822	MAD1L1	MAD1|PIG9|TP53I9|TXBP181	mitotic arrest deficient 1 like 1	protein-coding
47.4666	chr22	18730950	18731503	+	0.166667	NA	Intergenic	(TTATA)n|Simple_repeat|Simple_repeat	-2688	NR_136561	642643		NR_136561	ENSG00000182824	FAM230E	LINC01662	family with sequence similarity 230 member E	ncRNA
36.5-7	chr3	114478904	114479296	+	0.166667	NA	intron (NR_121661, intron 1 of 2)	intron (NR_121661, intron 1 of 2)	25507	NR_121661	101929754	Hs.614195	NR_121661	ENSG00000242290	ZBTB20-AS5	-	ZBTB20 antisense RNA 5	ncRNA
28.8667-2	chr2	154781981	154782229	+	0.166667	NA	intron (NM_002239, intron 2 of 2)	intron (NM_002239, intron 2 of 2)	83410	NM_002239	3760	Hs.591606	NM_002239	ENSG00000162989	KCNJ3	GIRK1|KGA|KIR3.1	potassium voltage-gated channel subfamily J member 3	protein-coding
28.5333-2	chr11	37302959	37303397	+	0.166667	NA	Intergenic	THE1B|LTR|ERVL-MaLR	-635423	NR_135110	105376633	Hs.135690	NR_135110	ENSG00000254516	LINC02760	-	long intergenic non-protein coding RNA 2760	ncRNA
46.7667	chr3	36116164	36116708	+	0.166667	NA	Intergenic	L1MA3|LINE|L1	-264051	NM_001292049	6769	Hs.56045	NM_003149	ENSG00000144681	STAC	STAC1	SH3 and cysteine rich domain	protein-coding
46.2334	chr8	120153048	120153518	+	0.166667	NA	intron (NM_021110, intron 2 of 47)	AluJb|SINE|Alu	28181	NM_021110	7373	Hs.409662	NM_021110	ENSG00000187955	COL14A1	UND	collagen type XIV alpha 1 chain	protein-coding
65.5-2	chr19	36448159	36448594	+	0.166667	NA	3' UTR (NM_001145343, exon 5 of 5)	3' UTR (NM_001145343, exon 5 of 5)	27202	NR_033748	644189	Hs.608412	NR_033748		LOC644189	-	acyl-CoA thioesterase 4 pseudogene	pseudo
21.9-5	chr2	31732854	31733058	+	0.166667	NA	Intergenic	L1MA4|LINE|L1	71024	NR_146994	105374449	Hs.580386	NR_146994	ENSG00000223647	LINC01946	-	long intergenic non-protein coding RNA 1946	ncRNA
12.1333-3	chr5	11412850	11412950	+	0.166667	NA	intron (NM_001288715, intron 2 of 20)	intron (NM_001288715, intron 2 of 20)	176017	NM_001288716	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
38.5999-4	chr5	154963528	154963966	+	0.166667	NA	intron (NM_001014990, intron 5 of 5)	intron (NM_001014990, intron 5 of 5)	22674	NM_001014990	29093	Hs.483924	NM_014180	ENSG00000082515	MRPL22	HSPC158|L22mt|MRP-L22|MRP-L25|RPML25	mitochondrial ribosomal protein L22	protein-coding
45.0334	chr1	40261231	40261675	+	0.166667	NA	intron (NM_005857, intron 2 of 9)	AluSc8|SINE|Alu	3217	NM_005857	10269	Hs.132642	NM_005857	ENSG00000084073	ZMPSTE24	FACE-1|FACE1|HGPS|PRO1|STE24|Ste24p	zinc metallopeptidase STE24	protein-coding
45.7999	chr17	30078140	30078494	+	0.166667	NA	exon (NM_198529, exon 15 of 23)	exon (NM_198529, exon 15 of 23)	-38490	NM_001261467	84081	Hs.462663	NM_032141	ENSG00000126653	NSRP1	CCDC55|HSPC095|NSrp70	nuclear speckle splicing regulatory protein 1	protein-coding
25.1667	chr12	84964620	84964817	+	0.166667	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-51889	NM_018057	55117	Hs.44424	NM_018057	ENSG00000072041	SLC6A15	NTT73|SBAT1|V7-3|hv7-3	solute carrier family 6 member 15	protein-coding
22.1334-2	chr2	134738637	134738900	+	0.166667	NA	Intergenic	Intergenic	-19768	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding
34.6334	chr6	135428358	135428812	+	0.166667	NA	intron (NM_017651, intron 18 of 27)	intron (NM_017651, intron 18 of 27)	69155	NM_001134831	54806	Hs.386684	NM_017651	ENSG00000135541	AHI1	AHI-1|JBTS3|ORF1|dJ71N10.1	Abelson helper integration site 1	protein-coding
35.7667	chr1	204568129	204568393	+	0.166667	NA	Intergenic	MER102c|DNA|hAT-Charlie	51855	NM_002393	4194	Hs.497492	NM_002393	ENSG00000198625	MDM4	HDMX|MDMX|MRP1	MDM4 regulator of p53	protein-coding
45.0333-2	chr2	200911711	200912115	+	0.166667	NA	intron (NR_033915, intron 16 of 16)	L2b|LINE|L2	19995	NM_001142356	60491	Hs.145284	NM_021824	ENSG00000196290	NIF3L1	ALS2CR1|CALS-7|MDS015	NGG1 interacting factor 3 like 1	protein-coding
52.1334	chr11	107636683	107637146	+	0.166667	NA	intron (NM_001308018, intron 7 of 12)	intron (NM_001308018, intron 7 of 12)	45767	NM_018712	55531	Hs.495779	NM_018712	ENSG00000110675	ELMOD1	-	ELMO domain containing 1	protein-coding
29.5333-6	chr5	5290057	5290574	+	0.166667	NA	intron (NM_139056, intron 18 of 22)	intron (NM_139056, intron 18 of 22)	-132362	NM_015325	23379	Hs.449296	NM_015325	ENSG00000164151	ICE1	KIAA0947	interactor of little elongation complex ELL subunit 1	protein-coding
47.9	chr2	62044640	62045160	+	0.166667	NA	intron (NM_001321781, intron 2 of 2)	intron (NM_001321781, intron 2 of 2)	139258	NM_152516	150684	Hs.468702	NM_152516	ENSG00000173163	COMMD1	C2orf5|MURR1	copper metabolism domain containing 1	protein-coding
33.3667-2	chr15	80670122	80670338	+	0.166667	NA	Intergenic	Intergenic	-25080	NM_021214	58489	Hs.459072	NM_021214	ENSG00000136379	ABHD17C	FAM108C1	abhydrolase domain containing 17C	protein-coding
33.1-5	chr6	68240100	68240463	+	0.166667	NA	intron (NR_125854, intron 3 of 3)	intron (NR_125854, intron 3 of 3)	89618	NR_125854	101928280	Hs.544560	NR_125854	ENSG00000226497	LINC02549	-	long intergenic non-protein coding RNA 2549	ncRNA
22.8334	chr1	64504318	64504506	+	0.166667	NA	intron (NM_020925, intron 1 of 26)	intron (NM_020925, intron 1 of 26)	-1502	NM_001293274	57685	Hs.443891	NM_020925	ENSG00000158966	CACHD1	-	cache domain containing 1	protein-coding
56.4667	chr5	110815230	110815799	+	0.166667	NA	Intergenic	L1MD2|LINE|L1	76507	NM_138773	91137	Hs.75639	NM_138773	ENSG00000164209	SLC25A46	HMSN6B	solute carrier family 25 member 46	protein-coding
43.5333-3	chr15	98230251	98230576	+	0.166667	NA	Intergenic	Intergenic	101145	NR_146566	105371011		NR_146566		LINC02351	-	long intergenic non-protein coding RNA 2351	ncRNA
29.4667-7	chr4	112845834	112846084	+	0.166667	NA	intron (NM_001354275, intron 1 of 43)	intron (NM_001354275, intron 1 of 43)	-15028	NM_001354267	287	Hs.620557	NM_001148	ENSG00000145362	ANK2	ANK-2|LQT4|brank-2	ankyrin 2	protein-coding
10.9333-12	chr5	22217970	22218061	+	0.166667	NA	intron (NM_001364104, intron 2 of 13)	(ATTA)n|Simple_repeat|Simple_repeat	-4165	NM_001364107	1010	Hs.113684	NM_004061	ENSG00000154162	CDH12	CDHB	cadherin 12	protein-coding
18-8	chr2	15602630	15602797	+	0.166667	NA	intron (NM_004939, intron 7 of 25)	AluSx1|SINE|Alu	10845	NM_004939	1653	Hs.440599	NM_004939	ENSG00000079785	DDX1	DBP-RB|UKVH5d	DEAD-box helicase 1	protein-coding
23.3-15	chr8	111907561	111907754	+	0.166667	NA	Intergenic	Intergenic	531018	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
27.6334-2	chr2	144819895	144820215	+	0.166667	NA	intron (NR_033870, intron 2 of 4)	L1MB8|LINE|L1	152088	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41	ncRNA
28.0667-9	chr20	33107599	33107818	+	0.166667	NA	intron (NM_182519, intron 14 of 15)	intron (NM_182519, intron 14 of 15)	26196	NM_182519	149954	Hs.38961	NM_182519	ENSG00000186191	BPIFB4	C20orf186|LPLUNC4|RY2G5|dJ726C3.5	BPI fold containing family B member 4	protein-coding
42.2667-4	chr3	181722632	181722915	+	0.166667	NA	intron (NR_075091, intron 7 of 7)	intron (NR_075091, intron 7 of 7)	10848	NM_003106	6657	Hs.518438	NM_003106	ENSG00000181449	SOX2	ANOP3|MCOPS3	SRY-box transcription factor 2	protein-coding
62.6001	chr10	99166492	99166952	+	0.166667	NA	intron (NM_021828, intron 2 of 11)	L1MC4|LINE|L1	69153	NM_001166244	60495	Hs.500750	NM_021828	ENSG00000172987	HPSE2	HPA2|HPR2|UFS|UFS1	heparanase 2 (inactive)	protein-coding
35.4667-9	chr4	31937936	31938215	+	0.166667	NA	Intergenic	L1ME2|LINE|L1	-59304	NR_125936	102723828	Hs.575118	NR_125936	ENSG00000251129	LINC02506	-	long intergenic non-protein coding RNA 2506	ncRNA
22.1-8	chr4	98856780	98857114	+	0.166667	NA	Intergenic	L1MC5a|LINE|L1	72186	NM_001130678	1977	Hs.13211	NM_001968	ENSG00000151247	EIF4E	AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E	eukaryotic translation initiation factor 4E	protein-coding
37-4	chr17	27020286	27020762	+	0.166667	NA	Intergenic	AluSx|SINE|Alu	68717	NR_135673	105371703	Hs.649918	NR_135673		LOC105371703	-	uncharacterized LOC105371703	ncRNA
19.2667-13	chr9	128177560	128177756	+	0.166667	NA	exon (NM_001131018, exon 10 of 17)	exon (NM_001131018, exon 10 of 17)	13914	NM_001131017	25792	Hs.212395	NM_012127	ENSG00000148337	CIZ1	LSFR1|NP94|ZNF356	CDKN1A interacting zinc finger protein 1	protein-coding
24.4-11	chr2	41149745	41149958	+	0.166667	NA	Intergenic	Intergenic	-637416	NM_001112802	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding
41.4666	chr12	95894115	95894827	+	0.166667	NA	intron (NM_182496, intron 8 of 15)	MSTB1|LTR|ERVL-MaLR	35519	NM_003095	6636	Hs.105465	NM_003095	ENSG00000139343	SNRPF	SMF|Sm-F|snRNP-F	small nuclear ribonucleoprotein polypeptide F	protein-coding
49.7667-2	chr4	35805980	35806418	+	0.166667	NA	Intergenic	Intergenic	437740	NR_146893	116984	Hs.479451	NM_015230	ENSG00000047365	ARAP2	CENTD1|PARX	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	protein-coding
55.0667	chr1	47294093	47294752	+	0.166667	NA	intron (NM_001282938, intron 9 of 18)	intron (NM_001282938, intron 9 of 18)	19725	NM_001282939	6491	Hs.525198	NM_003035	ENSG00000123473	STIL	MCPH7|SIL	STIL centriolar assembly protein	protein-coding
10.0333-5	chr3	65817550	65817641	+	0.166667	NA	intron (NM_001365904, intron 1 of 24)	intron (NM_001365904, intron 1 of 24)	-76221	NR_046575	100873983	Hs.663889	NR_046575	ENSG00000240175	MAGI1-AS1	-	MAGI1 antisense RNA 1	ncRNA
18.3667-8	chr3	36042258	36042435	+	0.166667	NA	Intergenic	L1MA2|LINE|L1	297870	NR_029824	406916		NR_029824	ENSG00000207625	MIR128-2	MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b	microRNA 128-2	ncRNA
48-4	chr4	58749394	58749727	+	0.166667	NA	Intergenic	LTR22A|LTR|ERVK	-213232	NR_133943	105377671	Hs.225045	NR_133943	ENSG00000250340	LINC02494	-	long intergenic non-protein coding RNA 2494	ncRNA
27.5999-3	chr7	22949757	22950212	+	0.166667	NA	intron (NM_001363467, intron 10 of 11)	intron (NM_001363467, intron 10 of 11)	64146	NM_001363466	84668	Hs.85603	NM_032581	ENSG00000122591	FAM126A	DRCTNNB1A|HCC|HLD5|HYCC1	family with sequence similarity 126 member A	protein-coding
23.2334	chr21	10655878	10656081	+	0.166667	NA	Intergenic	(TCCATTCCAT)n|Simple_repeat|Simple_repeat	134465	NM_199259	7179	Hs.122986	NM_199259	ENSG00000274391	TPTE	CT44|PTEN2	transmembrane phosphatase with tensin homology	protein-coding
51.5668	chr2	76522526	76522905	+	0.166667	NA	Intergenic	Intergenic	-463250	NR_110284	101927907	Hs.382185	NR_110284	ENSG00000234653	LOC101927907	-	uncharacterized LOC101927907	ncRNA
60.1667	chr20	48791157	48791686	+	0.166667	NA	intron (NM_020820, intron 1 of 39)	MIR|SINE|MIR	36578	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1	protein-coding
41.1333-5	chr16	22636418	22636814	+	0.166667	NA	Intergenic	AluSz|SINE|Alu	90918	NR_003676	653786	Hs.564945	NR_003676	ENSG00000257838	OTOAP1	-	OTOA pseudogene 1	pseudo
47.0001-2	chr5	121289903	121290468	+	0.166667	NA	Intergenic	Intergenic	-32365	NR_104999	102467226		NR_104999		LOC102467226	-	uncharacterized LOC102467226	ncRNA
54.5001-2	chr2	120910144	120910683	+	0.166667	NA	intron (NM_005270, intron 2 of 13)	intron (NM_005270, intron 2 of 13)	118132	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding
36.6334	chr6	71415456	71415810	+	0.166667	NA	non-coding (NR_121614, exon 3 of 3)	non-coding (NR_121614, exon 3 of 3)	5112	NR_121612	79940	Hs.368337	NR_026807	ENSG00000233237	LINC00472	C6orf155|P53RRA	long intergenic non-protein coding RNA 472	ncRNA
19-6	chr13	73385699	73385841	+	0.166667	NA	Intergenic	Intergenic	-178474	NR_047009	100874155	Hs.672679	NR_047009		LINC00392	-	long intergenic non-protein coding RNA 392	ncRNA
64.8334	chr5	84948987	84949478	+	0.166667	NA	Intergenic	Intergenic	-564352	NM_005711	10085	Hs.482730	NM_005711	ENSG00000164176	EDIL3	DEL1	EGF like repeats and discoidin domains 3	protein-coding
42.4-6	chr4	67934178	67934673	+	0.166667	NA	intron (NM_001114387, intron 3 of 9)	intron (NM_001114387, intron 3 of 9)	29068	NM_001114387	339967	Hs.450110	NM_182606	ENSG00000187054	TMPRSS11A	ECRG1	transmembrane serine protease 11A	protein-coding
27.9667-5	chr2	168395125	168395418	+	0.166667	NA	Intergenic	Intergenic	-61001	NM_203463	253782	Hs.506829	NM_203463	ENSG00000172292	CERS6	CERS5|LASS6	ceramide synthase 6	protein-coding
16.6333-14	chr8	136197116	136197350	+	0.166667	NA	Intergenic	Intergenic	-333565	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
51.1667-2	chr17	70645131	70645782	+	0.166667	NA	Intergenic	MIR|SINE|MIR	475921	NM_000891	3759	Hs.1547	NM_000891	ENSG00000123700	KCNJ2	ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3	potassium voltage-gated channel subfamily J member 2	protein-coding
37.2667-2	chr18	69191074	69191358	+	0.166667	NA	Intergenic	Intergenic	-209672	NM_152721	220164	Hs.278285	NM_152721	ENSG00000206052	DOK6	DOK5L|HsT3226	docking protein 6	protein-coding
44.5-4	chr5	168736312	168736800	+	0.166667	NA	intron (NM_003062, intron 20 of 35)	intron (NM_003062, intron 20 of 35)	29629	NR_130737	101927969	Hs.661903	NR_130737		LOC101927969	-	uncharacterized LOC101927969	ncRNA
33.8667-7	chr2	155960377	155960668	+	0.166667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	294409	NR_110249	101929378	Hs.171192	NR_110249	ENSG00000226383	LINC01876	-	long intergenic non-protein coding RNA 1876	ncRNA
29.4334-3	chr9	114829449	114829751	+	0.166667	NA	Intergenic	Intergenic	-23561	NM_005118	9966	Hs.23349	NM_005118	ENSG00000181634	TNFSF15	TL1|TL1A|TNLG1B|VEGI|VEGI192A	TNF superfamily member 15	protein-coding
44.5001-2	chr2	61422050	61422476	+	0.166667	NA	intron (NM_014709, intron 1 of 79)	intron (NM_014709, intron 1 of 79)	-4886	NR_003707	100124537	Hs.675825	NR_003707	ENSG00000206937	SNORA70B	-	small nucleolar RNA, H/ACA box 70B	snoRNA
28.5667-11	chr21	18685226	18685505	+	0.166667	NA	TTS (NR_036166)	TTS (NR_036166)	799	NR_036166	100422920		NR_036166	ENSG00000265841	MIR548X	-	microRNA 548x	ncRNA
28.5-5	chr2	104462320	104462611	+	0.166667	NA	intron (NR_015399, intron 1 of 3)	intron (NR_015399, intron 1 of 3)	28118	NR_015399	150568	Hs.107284	NR_015399	ENSG00000235597	LINC01102	-	long intergenic non-protein coding RNA 1102	ncRNA
25.9334-3	chr7	8901095	8901264	+	0.166667	NA	Intergenic	L2c|LINE|L2	467570	NM_152745	30010	Hs.487564	NM_152745	ENSG00000122584	NXPH1	NPH1|Nbla00697	neurexophilin 1	protein-coding
9.70001	chr2	45533151	45533244	+	0.166667	NA	intron (NM_018079, intron 14 of 20)	intron (NM_018079, intron 14 of 20)	78070	NM_018079	55133	Hs.14229	NM_018079	ENSG00000068784	SRBD1	-	S1 RNA binding domain 1	protein-coding
24.8334-3	chr7	22564797	22564964	+	0.166667	NA	intron (NR_038393, intron 1 of 3)	intron (NR_038393, intron 1 of 3)	1543	NR_038393	100506178	Hs.668122	NR_038393	ENSG00000232759	LOC100506178	-	uncharacterized LOC100506178	ncRNA
49.1334-2	chr1	183737427	183737730	+	0.166667	NA	intron (NM_001297669, intron 2 of 18)	FLAM_C|SINE|Alu	-67542	NM_001297671	23179	Hs.497148	NM_015149	ENSG00000143344	RGL1	RGL	ral guanine nucleotide dissociation stimulator like 1	protein-coding
18.5667-9	chr2	167230127	167230238	+	0.166667	NA	intron (NM_001199144, intron 3 of 8)	intron (NM_001199144, intron 3 of 8)	42810	NM_001199145	129446	Hs.73680	NM_152381	ENSG00000163092	XIRP2	CMYA3	xin actin binding repeat containing 2	protein-coding
26.1-2	chr10	24857876	24858455	+	0.166667	NA	intron (NM_020200, intron 5 of 8)	intron (NM_020200, intron 5 of 8)	94441	NM_020200	56952	Hs.405619	NM_020200	ENSG00000099256	PRTFDC1	HHGP	phosphoribosyl transferase domain containing 1	protein-coding
27.3334	chr12	88136404	88136716	+	0.166667	NA	intron (NM_025114, intron 6 of 53)	intron (NM_025114, intron 6 of 53)	5656	NM_025114	80184	Hs.150444	NM_025114	ENSG00000198707	CEP290	3H11Ag|BBS14|CT87|JBTS5|LCA10|MKS4|NPHP6|POC3|SLSN6|rd16	centrosomal protein 290	protein-coding
28.3334	chr10	43500556	43500843	+	0.166667	NA	Intergenic	AluJb|SINE|Alu	63588	NM_001355450	642819	Hs.719657	NM_001355444	ENSG00000243660	ZNF487	KRBO1|ZNF487P	zinc finger protein 487	protein-coding
40.4001-2	chr4	22911818	22912281	+	0.166667	NA	Intergenic	Intergenic	197960	NM_001277225	57733	Hs.653107	NM_020973	ENSG00000249948	GBA3	CBG|CBGL1|GLUC|KLRP	glucosylceramidase beta 3 (gene/pseudogene)	protein-coding
54.3667	chr3	77463586	77464204	+	0.166667	NA	intron (NM_001290039, intron 2 of 26)	intron (NM_001290039, intron 2 of 26)	365883	NM_001128929	6092	Hs.13305	NM_002942	ENSG00000185008	ROBO2	SAX3	roundabout guidance receptor 2	protein-coding
68.0668	chr5	119976449	119976995	+	0.166667	NA	Intergenic	Intergenic	347163	NM_001163991	340069	Hs.713304	NM_182761	ENSG00000164334	FAM170A	ZNFD	family with sequence similarity 170 member A	protein-coding
17.2333-10	chr6	51828012	51828197	+	0.166667	NA	intron (NM_138694, intron 52 of 66)	intron (NM_138694, intron 52 of 66)	206234	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
70.1667	chr20	45029933	45030581	+	0.166667	NA	intron (NM_006282, intron 10 of 10)	AluSg7|SINE|Alu	63745	NM_006282	6789	Hs.472838	NM_006282	ENSG00000101109	STK4	KRS2|MST1|YSK3	serine/threonine kinase 4	protein-coding
36.4333	chr12	85007426	85007775	+	0.166667	NA	Intergenic	L1PA16|LINE|L1	28677	NM_001100917	144448	Hs.156962	NM_001100917	ENSG00000231738	TSPAN19	-	tetraspanin 19	protein-coding
29.1667-8	chr2	148806205	148806481	+	0.166667	NA	Intergenic	L1M4|LINE|L1	-68884	NM_004522	3800	Hs.435557	NM_004522	ENSG00000168280	KIF5C	CDCBM2|KINN|NKHC|NKHC-2|NKHC2	kinesin family member 5C	protein-coding
66.5-2	chrX	78034929	78035702	+	0.166667	NA	intron (NM_001282224, intron 16 of 21)	intron (NM_001282224, intron 16 of 21)	-65677	NM_001029891	441531	Hs.632822	NM_001029891	ENSG00000226784	PGAM4	PGAM-B|PGAM1|PGAM3|dJ1000K24.1	phosphoglycerate mutase family member 4	protein-coding
22.5667-4	chr17	56816415	56816631	+	0.166667	NA	intron (NM_001085430, intron 4 of 7)	MIRc|SINE|MIR	17397	NM_001085430	339210	Hs.658949	NM_001085430	ENSG00000214226	C17orf67	-	chromosome 17 open reading frame 67	protein-coding
19.6666-2	chr3	138338732	138338952	+	0.166667	NA	Intergenic	Intergenic	-8806	NM_001252091	22808	Hs.527021	NM_012219	ENSG00000158186	MRAS	M-RAs|R-RAS3|RRAS3	muscle RAS oncogene homolog	protein-coding
32.9-9	chr2	15843250	15843508	+	0.166667	NA	Intergenic	Intergenic	-77020	NR_125783	103752554	Hs.269571	NR_125783	ENSG00000223850	MYCNUT	MYCNUN|lncUSMycN	MYCN upstream transcript	ncRNA
20.7334	chr10	76007341	76007484	+	0.166667	NA	intron (NR_131178, intron 3 of 7)	intron (NR_131178, intron 3 of 7)	224651	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	LRMDA	C10orf11|CDA017	leucine rich melanocyte differentiation associated	protein-coding
46.7333	chr12	33411906	33412295	+	0.166667	NA	intron (NM_198992, intron 2 of 6)	(TTAT)n|Simple_repeat|Simple_repeat	27719	NM_198992	341359	Hs.118703	NM_198992	ENSG00000110975	SYT10	-	synaptotagmin 10	protein-coding
48.8666	chr20	35460939	35461552	+	0.166667	NA	intron (NM_007186, intron 3 of 34)	intron (NM_007186, intron 3 of 34)	1262	NM_001318219	11190	Hs.443976	NM_007186	ENSG00000126001	CEP250	C-NAP1|CEP2|CNAP1|CRDHL2	centrosomal protein 250	protein-coding
20.7334-2	chr15	27565707	27565845	+	0.166667	NA	Intergenic	LTR78B|LTR|ERV1	-404457	NR_120343	101928869	Hs.585699	NR_120343	ENSG00000228740	GABRG3-AS1	-	GABRG3 antisense RNA 1	ncRNA
23.7667-5	chr13	111541454	111541826	+	0.166667	NA	Intergenic	Intergenic	-54369	NR_135814	105370369		NR_135814	ENSG00000215881	LINC02337	-	long intergenic non-protein coding RNA 2337	ncRNA
24-8	chr20	45879100	45879524	+	0.166667	NA	TTS (NM_080752)	TTS (NM_080752)	-1915	NM_080603	90204	Hs.517075	NM_080603	ENSG00000168612	ZSWIM1	C20orf162	zinc finger SWIM-type containing 1	protein-coding
30.2-9	chr22	28365500	28365771	+	0.166667	NA	intron (NM_001145418, intron 2 of 22)	intron (NM_001145418, intron 2 of 22)	-94234	NR_106713	102466081		NR_106713	ENSG00000276162	MIR5739	hsa-mir-5739	microRNA 5739	ncRNA
56.2667-2	chr3	117707794	117708423	+	0.166667	NA	Intergenic	Intergenic	-17183	NR_146652	105374057	Hs.518179	NR_146652	ENSG00000241213	LINC02024	-	long intergenic non-protein coding RNA 2024	ncRNA
31.6333-3	chr13	65902720	65902989	+	0.166667	NA	Intergenic	Intergenic	36807	NR_132362	105370242	Hs.578051	NR_132362		LINC01052	-	long intergenic non-protein coding RNA 1052	ncRNA
25.8667-4	chr17	82213554	82213719	+	0.166667	NA	promoter-TSS (NM_001316321)	promoter-TSS (NM_001316321)	-794	NM_001367828	284001	Hs.631724	NM_152675	ENSG00000176155	CCDC57	-	coiled-coil domain containing 57	protein-coding
32.0334	chr13	28134701	28134925	+	0.166667	NA	Intergenic	AluJb|SINE|Alu	-3732	NM_175854	255967	Hs.645015	NM_175854	ENSG00000152520	PAN3	-	poly(A) specific ribonuclease subunit PAN3	protein-coding
25.9333-3	chr17	50158565	50158843	+	0.166667	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	-7301	NM_000023	6442	Hs.463412	NM_000023	ENSG00000108823	SGCA	50DAG|ADL|DAG2|DMDA2|LGMD2D|LGMDR3|SCARMD1|adhalin	sarcoglycan alpha	protein-coding
41.2667	chr10	65606956	65607203	+	0.166667	NA	intron (NR_120647, intron 2 of 5)	intron (NR_120647, intron 2 of 5)	35654	NR_120647	101928913	Hs.568857	NR_120647		LINC01515	-	long intergenic non-protein coding RNA 1515	ncRNA
14.2-3	chr2	17271807	17271914	+	0.166667	NA	Intergenic	Intergenic	246580	NM_001099218	729475	Hs.515802	NM_001099218	ENSG00000214842	RAD51AP2	-	RAD51 associated protein 2	protein-coding
40.6334-4	chr4	183783615	183784059	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	-14185	NR_132761	56977	Hs.21958	NM_020225	ENSG00000173320	STOX2	-	storkhead box 2	protein-coding
42.7667-4	chrUn_KI270438v1	106574	107000	+	0.166667	NA	NA	(GGAATGGAAT)n|Simple_repeat|Simple_repeat	NA	NA								
37.7333-2	chr14	23816614	23817008	+	0.166667	NA	Intergenic	Intergenic	-136959	NM_001282988	10901	Hs.528385	NM_021004	ENSG00000157326	DHRS4	CR|NRDR|PHCR|PSCD|SCAD-SRL|SDR-SRL|SDR25C1|SDR25C2	dehydrogenase/reductase 4	protein-coding
25.9667-8	chr4	90633965	90634140	+	0.166667	NA	intron (NM_207491, intron 6 of 7)	intron (NM_207491, intron 6 of 7)	399021	NM_207491	401145	Hs.654735	NM_207491	ENSG00000184305	CCSER1	FAM190A	coiled-coil serine rich protein 1	protein-coding
40.7333-9	chr8	139029655	139030247	+	0.166667	NA	Intergenic	L1ME3A|LINE|L1	-115910	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
43.3-3	chr20	54856034	54856489	+	0.166667	NA	Intergenic	Intergenic	380668	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
48.9334	chr18	66668038	66668597	+	0.166667	NA	Intergenic	Intergenic	-64227	NM_001271028	28513	Hs.42771	NM_021153	ENSG00000071991	CDH19	CDH7|CDH7L2	cadherin 19	protein-coding
12.7334	chr2	159600949	159601027	+	0.166667	NA	intron (NM_001329857, intron 1 of 36)	intron (NM_001329857, intron 1 of 36)	-14306	NR_110587	643072	Hs.632541	NR_110587		LOC643072	-	uncharacterized LOC643072	ncRNA
28.5333-10	chr5	27932893	27933227	+	0.166667	NA	Intergenic	AluSg|SINE|Alu	354605	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
17.3666	chr8	87941387	87941536	+	0.166667	NA	Intergenic	Intergenic	-67446	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
19.3667-4	chr17	35673598	35673738	+	0.166667	NA	intron (NM_001030006, intron 16 of 21)	intron (NM_001030006, intron 16 of 21)	-57971	NM_033315	91608	Hs.744994	NM_033315	ENSG00000270885	RASL10B	RRP17|VTS58635	RAS like family 10 member B	protein-coding
30.4333-7	chr7	120466679	120466963	+	0.166667	NA	intron (NM_012281, intron 1 of 5)	MLT1D|LTR|ERVL-MaLR	193646	NM_012281	3751	Hs.654739	NM_012281	ENSG00000184408	KCND2	KV4.2|RK5	potassium voltage-gated channel subfamily D member 2	protein-coding
30.4334-4	chr2	41540684	41541204	+	0.166667	NA	Intergenic	Intergenic	-336611	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA
53.8-2	chr22	30296533	30297022	+	0.166667	NA	intron (NM_031937, intron 3 of 8)	L1ME2|LINE|L1	-7150	NM_001037666	652968	Hs.444950	NM_001037666	ENSG00000239282	CASTOR1	GATSL3	cytosolic arginine sensor for mTORC1 subunit 1	protein-coding
45.2667	chr17	44254141	44254644	+	0.166667	NA	intron (NM_000342, intron 16 of 19)	intron (NM_000342, intron 16 of 19)	13743	NM_000342	6521	Hs.210751	NM_000342	ENSG00000004939	SLC4A1	AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR	solute carrier family 4 member 1 (Diego blood group)	protein-coding
38.6-11	chr7	144570038	144570595	+	0.166667	NA	intron (NM_001042482, intron 6 of 7)	intron (NM_001042482, intron 6 of 7)	-160089	NM_001080413	135935	Hs.558628	NM_001080413	ENSG00000106410	NOBOX	OG-2|OG2|OG2X|POF5|TCAG_12042	NOBOX oogenesis homeobox	protein-coding
17.6666	chr14	20993017	20993271	+	0.166667	NA	exon (NM_001029991, exon 6 of 13)	exon (NM_001029991, exon 6 of 13)	3164	NM_022734	64745	Hs.512693	NM_022734	ENSG00000165792	METTL17	METT11D1	methyltransferase like 17	protein-coding
13.3667-4	chr13	109348459	109348539	+	0.166667	NA	Intergenic	Intergenic	-52197	NR_126361	104326054	Hs.569298	NR_126361	ENSG00000229792	LINC00399	TCONS_00021596	long intergenic non-protein coding RNA 399	ncRNA
36.0334-2	chr2	7328409	7328806	+	0.166667	NA	Intergenic	Intergenic	-92654	NR_038432	100506274	Hs.177930	NR_038432	ENSG00000229727	LOC100506274	-	uncharacterized LOC100506274	ncRNA
55.6334	chr12	5278069	5278551	+	0.166667	NA	Intergenic	Intergenic	-35159	NR_120476	101929584	Hs.436529	NR_120476	ENSG00000256115	LINC02443	-	long intergenic non-protein coding RNA 2443	ncRNA
27.3334-2	chr5	32612749	32612991	+	0.166667	NA	Intergenic	Intergenic	27313	NM_006713	10923	Hs.229641	NM_006713	ENSG00000113387	SUB1	P15|PC4|p14	SUB1 regulator of transcription	protein-coding
57.1-3	chr8	118484296	118484804	+	0.166667	NA	intron (NM_001101676, intron 2 of 4)	L1MA10|LINE|L1	-136451	NR_038210	552860	Hs.571527	NR_038210	ENSG00000281641	SAMD12-AS1	C8orf26|NCRNA00252	SAMD12 antisense RNA 1	ncRNA
32.0333-5	chr17	69119913	69120269	+	0.166667	NA	intron (NM_080284, intron 10 of 38)	L1ME3Cz|LINE|L1	-20459	NR_039750	100616316		NR_039750	ENSG00000283385	MIR4524A	MIR4524|hsa-mir-4524a|mir-4524a	microRNA 4524a	ncRNA
15.1-11	chr6	61922184	61922304	+	0.166667	NA	intron (NR_146874, intron 4 of 13)	L1MEc|LINE|L1	348114	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
24.8334-2	chr2	49645393	49645593	+	0.166667	NA	Intergenic	Intergenic	328710	NM_001320156	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
33.2667-3	chr12	19043804	19044173	+	0.166667	NA	Intergenic	Intergenic	-85745	NM_019012	54477	Hs.188614	NM_019012	ENSG00000052126	PLEKHA5	PEPP-2|PEPP2	pleckstrin homology domain containing A5	protein-coding
39.0666-4	chr7	135485041	135485450	+	0.166667	NA	intron (NM_013316, intron 1 of 10)	AluSc|SINE|Alu	24857	NM_001190849	4850	Hs.490224	NM_013316	ENSG00000080802	CNOT4	CLONE243|NOT4|NOT4H	CCR4-NOT transcription complex subunit 4	protein-coding
46.8334	chr5	74313524	74313866	+	0.166667	NA	Intergenic	Intergenic	-5370	NR_105009	102503429	Hs.519391	NR_105009	ENSG00000248942	LINC01335	-	long intergenic non-protein coding RNA 1335	ncRNA
43.3667-4	chr5	107069042	107069443	+	0.166667	NA	Intergenic	Intergenic	-58228	NR_104671	102467213	Hs.570923	NR_104671	ENSG00000251027	LINC01950	-	long intergenic non-protein coding RNA 1950	ncRNA
22.4667-5	chr2	10663913	10664114	+	0.166667	NA	intron (NR_048552, intron 7 of 19)	AluSx|SINE|Alu	25962	NM_024894	79954	Hs.222494	NM_024894	ENSG00000115761	NOL10	PQBP5	nucleolar protein 10	protein-coding
29.5334-2	chr3	130357176	130357422	+	0.166667	NA	intron (NM_001278298, intron 1 of 40)	L1M5|LINE|L1	11783	NR_022012	256076	Hs.205403	NM_153264	ENSG00000172752	COL6A5	COL29A1|VWA4	collagen type VI alpha 5 chain	protein-coding
34.6333-3	chr3	107078067	107078428	+	0.166667	NA	Intergenic	(TCTT)n|Simple_repeat|Simple_repeat	162391	NR_028303	100302640	Hs.648607	NR_028303	ENSG00000242759	LINC00882	-	long intergenic non-protein coding RNA 882	ncRNA
30.8-18	chrX	85658714	85659115	+	0.166667	NA	Intergenic	Intergenic	-176866	NR_031710	100302171		NR_031710	ENSG00000283435	MIR1321	MIRN1321|hsa-mir-1321	microRNA 1321	ncRNA
17.1-4	chr12	16109705	16109835	+	0.166667	NA	Intergenic	Intergenic	167915	NM_001170798	729025	Hs.692712	NM_001170798	ENSG00000188991	SLC15A5	-	solute carrier family 15 member 5	protein-coding
70.2334	chr2	168660067	168660677	+	0.166667	NA	intron (NM_001256126, intron 4 of 10)	intron (NM_001256126, intron 4 of 10)	77429	NR_039933	100616356		NR_039933	ENSG00000265694	MIR4774	-	microRNA 4774	ncRNA
31.5-11	chr2	59990483	59990745	+	0.166667	NA	Intergenic	Intergenic	392422	NR_132991	106660609	Hs.565545	NR_132991	ENSG00000228590	MIR4432HG	-	MIR4432 host gene	ncRNA
12.1333	chr14	52932727	52932889	+	0.166667	NA	intron (NM_006832, intron 2 of 14)	intron (NM_006832, intron 2 of 14)	18242	NM_006832	10979	Hs.509343	NM_006832	ENSG00000073712	FERMT2	KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2	fermitin family member 2	protein-coding
19.8-23	chr7	45221157	45221335	+	0.166667	NA	Intergenic	Intergenic	63455	NM_005856	10268	Hs.25691	NM_005856	ENSG00000122679	RAMP3	-	receptor activity modifying protein 3	protein-coding
20.5334-2	chr20	59329691	59329882	+	0.166667	NA	Intergenic	Intergenic	29175	NM_001302456	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding
49.9	chr1	112169712	112170203	+	0.166667	NA	Intergenic	MamTip2|DNA|hAT-Tip100	179421	NR_145438	643355	Hs.279714	NR_145438	ENSG00000231437	LINC01750	-	long intergenic non-protein coding RNA 1750	ncRNA
20.6334-2	chr3	52496614	52496751	+	0.166667	NA	intron (NM_015136, intron 1 of 68)	intron (NM_015136, intron 1 of 68)	1344	NM_015136	23166	Hs.301989	NM_015136	ENSG00000010327	STAB1	CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1	stabilin 1	protein-coding
27.4334-2	chr2	200002179	200002443	+	0.166667	NA	Intergenic	Intergenic	-46820	NM_001039693	129450	Hs.204619	NM_152382	ENSG00000162971	TYW5	C2orf60|hTYW5	tRNA-yW synthesizing protein 5	protein-coding
19.7334-2	chr11	62173114	62173240	+	0.166667	NA	Intergenic	Intergenic	-17039	NM_006552	10648	Hs.202686	NM_006552	ENSG00000168515	SCGB1D1	LIPA|LPHA|LPNA	secretoglobin family 1D member 1	protein-coding
13.9-4	chr17	62573772	62573885	+	0.166667	NA	intron (NM_001284363, intron 10 of 19)	intron (NM_001284363, intron 10 of 19)	-53842	NM_006039	9902	Hs.7835	NM_006039	ENSG00000011028	MRC2	CD280|CLEC13E|ENDO180|UPARAP	mannose receptor C type 2	protein-coding
29.7999-2	chr6	169648182	169648521	+	0.166667	NA	intron (NM_182552, intron 15 of 25)	intron (NM_182552, intron 15 of 25)	53678	NM_182552	253769	Hs.131903	NM_182552	ENSG00000184465	WDR27	-	WD repeat domain 27	protein-coding
28.1666-4	chr19	49995250	49995561	+	0.166667	NA	intron (NM_016440, intron 7 of 14)	intron (NM_016440, intron 7 of 14)	25741	NR_145574	400709	Hs.568076	NM_001348364		SIGLEC16	SIGLECP16|Siglec-P16	sialic acid binding Ig like lectin 16 (gene/pseudogene)	protein-coding
44.5001	chr1	48266261	48266752	+	0.166667	NA	Intergenic	MIRc|SINE|MIR	43790	NM_001011547	200010	Hs.37890	NM_001011547	ENSG00000117834	SLC5A9	SGLT4	solute carrier family 5 member 9	protein-coding
31.6	chr1	41516824	41517288	+	0.166667	NA	intron (NM_024503, intron 7 of 8)	L2a|LINE|L2	-32373	NM_001302269	1907	Hs.1407	NM_001956	ENSG00000127129	EDN2	ET-2|ET2|PPET2	endothelin 2	protein-coding
45.8-4	chr2	41053871	41054332	+	0.166667	NA	Intergenic	Intergenic	-541666	NM_001112802	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding
25.7-15	chr8	132693729	132694067	+	0.166667	NA	Intergenic	L2a|LINE|L2	-18353	NM_012472	23639	Hs.591865	NM_012472	ENSG00000129295	LRRC6	CILD19|LRTP|TSLRP	leucine rich repeat containing 6	protein-coding
25.2333-5	chr15	46216679	46217007	+	0.166667	NA	Intergenic	Charlie25|DNA|hAT-Charlie	511648	NR_135680	105370802	Hs.447522	NR_135680	ENSG00000259200	LOC105370802	-	uncharacterized LOC105370802	ncRNA
35.1334-2	chr13	62099579	62100080	+	0.166667	NA	Intergenic	LTR1D|LTR|ERV1	-70281	NR_046995	100874143	Hs.552684	NR_046995	ENSG00000229578	LINC00358	-	long intergenic non-protein coding RNA 358	ncRNA
23.4667-8	chr5	1933907	1934110	+	0.166667	NA	Intergenic	Intergenic	46677	NR_109912	101929081	Hs.519180	NR_109912	ENSG00000249326	CTD-2194D22.4	-	uncharacterized LOC101929081	ncRNA
34.5334	chr12	13479334	13479584	+	0.166667	NA	Intergenic	Intergenic	-102714	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA
40.2334	chr1	53744336	53744781	+	0.166667	NA	Intergenic	L1MB5|LINE|L1	-5394	NM_001367484	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding
22.5667-10	chr9	27976167	27976305	+	0.166667	NA	intron (NM_001354574, intron 5 of 5)	intron (NM_001354574, intron 5 of 5)	-402370	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
34.4333-6	chr14	68426434	68426797	+	0.166667	NA	intron (NM_133509, intron 9 of 10)	MSTD-int|LTR|ERVL-MaLR	202172	NR_135816	100996664		NR_135816		LOC100996664	-	uncharacterized LOC100996664	ncRNA
49.5333-3	chr7	87124726	87125086	+	0.166667	NA	Intergenic	Intergenic	27411	NR_136252	101927420	Hs.633960	NR_136252	ENSG00000224046	LOC101927420	-	uncharacterized LOC101927420	ncRNA
43.3667-2	chr3	169177738	169178287	+	0.166667	NA	intron (NM_001205194, intron 1 of 15)	L2b|LINE|L2	-30541	NM_001366470	2122	Hs.656395	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding
40.7334-4	chr7	53552940	53553316	+	0.166667	NA	Intergenic	Intergenic	258803	NR_038371	401337	Hs.531378	NM_001001707	ENSG00000205628	LINC01446	GS1-179L18.1	long intergenic non-protein coding RNA 1446	ncRNA
33.2001	chr16	58206943	58207150	+	0.166667	NA	Intergenic	Charlie4a|DNA|hAT-Charlie	-8940	NM_001896	1459	Hs.82201	NM_001896	ENSG00000070770	CSNK2A2	CK2A2|CK2alpha'|CSNK2A1	casein kinase 2 alpha 2	protein-coding
35.2333-4	chr3	60552096	60552450	+	0.166667	NA	intron (NM_001320900, intron 5 of 9)	L1MB7|LINE|L1	65597	NR_128708	103504735		NR_128708	ENSG00000281426	MIR548BB	MI0029321|hsa-mir-548bb	microRNA 548bb	ncRNA
45.7001	chr10	11376559	11376906	+	0.166667	NA	Intergenic	Intergenic	-32058	NR_126062	414196	Hs.729598	NM_001012713		CELF2-AS1	C10orf31	CELF2 antisense RNA 1	ncRNA
21.0667-5	chr16	81535487	81535734	+	0.166667	NA	intron (NM_030629, intron 1 of 20)	MIRb|SINE|MIR	1708	NR_107008	102465840		NR_107008	ENSG00000277255	MIR7854	hsa-mir-7854	microRNA 7854	ncRNA
39.7667-6	chr3	35440222	35440689	+	0.166667	NA	Intergenic	L1MCa|LINE|L1	-46432	NR_110817	101928135	Hs.550715	NR_110817		LOC101928135	-	uncharacterized LOC101928135	ncRNA
29.6-7	chr15	35819477	35819704	+	0.166667	NA	intron (NR_038251, intron 2 of 2)	L2|LINE|L2	-107266	NR_039735	100616293		NR_039735	ENSG00000265098	MIR4510	mir-4510	microRNA 4510	ncRNA
21.3-4	chr12	51911417	51911544	+	0.166667	NA	promoter-TSS (NM_001077401)	promoter-TSS (NM_001077401)	-903	NM_001077401	94	Hs.591026	NM_000020	ENSG00000139567	ACVRL1	ACVRLK1|ALK-1|ALK1|HHT|HHT2|ORW2|SKR3|TSR-I	activin A receptor like type 1	protein-coding
43.5667-4	chr5	76473899	76474286	+	0.166667	NA	intron (NM_006633, intron 2 of 35)	intron (NM_006633, intron 2 of 35)	70807	NM_006633	10788	Hs.291030	NM_006633	ENSG00000145703	IQGAP2	-	IQ motif containing GTPase activating protein 2	protein-coding
37.8667	chr10	20996795	20997208	+	0.166667	NA	intron (NM_001173484, intron 3 of 6)	intron (NM_001173484, intron 3 of 6)	-99399	NM_006393	10529	Hs.5025	NM_006393	ENSG00000078114	NEBL	LASP2|LNEBL	nebulette	protein-coding
43.5667-3	chr4	105994569	105994951	+	0.166667	NA	Intergenic	Intergenic	27718	NR_125928	101929577	Hs.631131	NR_125928	ENSG00000249635	LOC101929577	-	uncharacterized LOC101929577	ncRNA
29.6334-2	chr16	2395612	2395789	+	0.166667	NA	intron (NR_003574, intron 8 of 16)	MIRb|SINE|MIR	-33747	NM_001323538	899	Hs.1973	NM_001761	ENSG00000162063	CCNF	FBX1|FBXO1	cyclin F	protein-coding
26.6667-5	chr14	55131726	55131959	+	0.166667	NA	intron (NM_002306, intron 1 of 5)	intron (NM_002306, intron 1 of 5)	2590	NM_002306	3958	Hs.531081	NM_002306	ENSG00000131981	LGALS3	CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2	galectin 3	protein-coding
40.1333-8	chr5	167390398	167390948	+	0.166667	NA	intron (NM_001122679, intron 3 of 29)	intron (NM_001122679, intron 3 of 29)	-182986	NM_001368145	57451	Hs.631957	NM_001080428	ENSG00000145934	TENM2	ODZ2|TEN-M2|TNM2|ten-2	teneurin transmembrane protein 2	protein-coding
50.2667	chr10	8575490	8576084	+	0.166667	NA	intron (NR_134492, intron 1 of 1)	intron (NR_134492, intron 1 of 1)	18604	NR_134492	105376398	Hs.63158	NR_134492		LOC105376398	-	uncharacterized LOC105376398	ncRNA
22.9333-7	chr18	57221816	57221972	+	0.166667	NA	Intergenic	LTR33|LTR|ERVL	-50700	NR_149129	105372138	Hs.574448	NR_149129	ENSG00000267726	LINC02565	-	long intergenic non-protein coding RNA 2565	ncRNA
34.3333-6	chr22	28600837	28601262	+	0.166667	NA	intron (NM_001145418, intron 2 of 22)	intron (NM_001145418, intron 2 of 22)	78816	NM_001145418	23331	Hs.387856	NM_015281	ENSG00000100154	TTC28	TPRBK	tetratricopeptide repeat domain 28	protein-coding
58.3333	chr7	40711490	40712284	+	0.166667	NA	intron (NM_024728, intron 13 of 14)	intron (NM_024728, intron 13 of 14)	268052	NR_110831	101928744	Hs.639767	NR_110831	ENSG00000232458	LINC01450	-	long intergenic non-protein coding RNA 1450	ncRNA
18.0334	chr1	101969357	101969503	+	0.166667	NA	intron (NR_110210, intron 1 of 7)	AluJb|SINE|Alu	27804	NM_058170	118427	Hs.484475	NM_058170	ENSG00000118733	OLFM3	NOE3|NOELIN3|OPTIMEDIN	olfactomedin 3	protein-coding
25.9667-10	chr5	99697558	99697871	+	0.166667	NA	Intergenic	LOR1b|LTR|ERV1	163724	NR_110562	102724855	Hs.519477	NR_110562		LINC02113	CTD-2151A2.1	long intergenic non-protein coding RNA 2113	ncRNA
35.1334-3	chr2	98308516	98308811	+	0.166667	NA	intron (NM_001345864, intron 20 of 21)	intron (NM_001345864, intron 20 of 21)	-37492	NM_001298	1261	Hs.234785	NM_001298	ENSG00000144191	CNGA3	ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3	cyclic nucleotide gated channel alpha 3	protein-coding
31.9334-2	chr17	61637979	61638375	+	0.166667	NA	Intergenic	L1MA3|LINE|L1	-46958	NM_199290	342538	Hs.591178	NM_199290	ENSG00000253506	NACA2	ANAC|NACAL	nascent polypeptide associated complex subunit alpha 2	protein-coding
39.6667-4	chr17	80051855	80052272	+	0.166667	NA	intron (NM_001330508, intron 7 of 10)	intron (NM_001330508, intron 7 of 10)	15421	NM_001330508	55036	Hs.202542	NM_017950	ENSG00000141519	CCDC40	CILD15|FAP172	coiled-coil domain containing 40	protein-coding
45.8334	chr10	114945858	114946298	+	0.166667	NA	intron (NM_139169, intron 2 of 7)	intron (NM_139169, intron 2 of 7)	7883	NM_139169	142940	Hs.21187	NM_139169	ENSG00000165832	TRUB1	PUS4	TruB pseudouridine synthase family member 1	protein-coding
25.0667	chr1	193731361	193731671	+	0.166667	NA	Intergenic	Intergenic	426771	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
31.5667-3	chr2	83336912	83337374	+	0.166667	NA	Intergenic	Intergenic	-185671	NR_146482	101928031	Hs.547548	NR_146482	ENSG00000232548	LINC01809	-	long intergenic non-protein coding RNA 1809	ncRNA
25.6-9	chr8	56470498	56470675	+	0.166667	NA	intron (NR_125813, intron 1 of 3)	intron (NR_125813, intron 1 of 3)	-23945	NM_001135690	5179	Hs.339831	NM_006211	ENSG00000181195	PENK	PE|PENK-A	proenkephalin	protein-coding
62.4334	chr17_GL000205v2_random	30674	31537	+	0.166667	NA	Intergenic	CER|Satellite|Satellite	26861	NR_003682	403340	Hs.572501	NR_003682		MGC70870	-	C-terminal binding protein 2 pseudogene	pseudo
23.5666	chr3	105689068	105689463	+	0.166667	NA	intron (NR_135809, intron 14 of 18)	intron (NR_135809, intron 14 of 18)	178326	NM_001321813	868	Hs.430589	NM_170662	ENSG00000114423	CBLB	Cbl-b|Nbla00127|RNF56	Cbl proto-oncogene B	protein-coding
37.0334	chr5	24052730	24052952	+	0.166667	NA	intron (NR_131245, intron 4 of 4)	MSTA|LTR|ERVL-MaLR	101493	NR_131245	439936	Hs.638078	NR_131245	ENSG00000248874	C5orf17	-	chromosome 5 open reading frame 17 (putative)	ncRNA
34.3667	chr5	77128469	77128838	+	0.166667	NA	intron (NR_024398, intron 3 of 3)	LTR16E2|LTR|ERVL	-41368	NR_138050	84327	Hs.584988	NM_032367	ENSG00000132846	ZBED3	-	zinc finger BED-type containing 3	protein-coding
19.9333-10	chr2	58371958	58372319	+	0.166667	NA	Intergenic	L1MC5a|LINE|L1	96261	NR_147010	105374744	Hs.447687	NR_147010	ENSG00000225226	LINC01795	-	long intergenic non-protein coding RNA 1795	ncRNA
35.8-3	chr18	12828151	12828416	+	0.166667	NA	intron (NM_080423, intron 4 of 8)	HAL1M8|LINE|L1	12679	NM_001308287	5771	Hs.654527	NM_002828	ENSG00000175354	PTPN2	PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP	protein tyrosine phosphatase non-receptor type 2	protein-coding
27.6334-3	chr21	16224248	16224450	+	0.166667	NA	intron (NR_136543, intron 1 of 4)	L1PA7|LINE|L1	29970	NR_027791	388815	Hs.473394	NR_027790		MIR99AHG	C21orf34|C21orf35|LINC00478|MONC	mir-99a-let-7c cluster host gene	ncRNA
21.3333-9	chr7	30978188	30978604	+	0.166667	NA	intron (NM_000823, intron 12 of 12)	L3|LINE|CR1	14443	NM_000823	2692	Hs.767	NM_000823	ENSG00000106128	GHRHR	GHRFR|GRFR|IGHD1B|IGHD4	growth hormone releasing hormone receptor	protein-coding
34.4333-9	chr2	16527404	16527693	+	0.166667	NA	Intergenic	ERVL-E-int|LTR|ERVL	138286	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding
15-9	chr4	35040735	35040985	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	-771113	NR_147183	105374394	Hs.570782	NR_147183	ENSG00000248685	LINC02484	-	long intergenic non-protein coding RNA 2484	ncRNA
30.3001	chr4	96420207	96420428	+	0.166667	NA	intron (NR_147149, intron 1 of 3)	intron (NR_147149, intron 1 of 3)	109614	NR_147149	105377338		NR_147149		LINC02267	-	long intergenic non-protein coding RNA 2267	ncRNA
36.8667-7	chr6	55177278	55177743	+	0.166667	NA	intron (NM_001526, intron 2 of 7)	intron (NM_001526, intron 2 of 7)	71050	NM_001526	3062	Hs.151624	NM_001526	ENSG00000137252	HCRTR2	OX2R	hypocretin receptor 2	protein-coding
27.3-2	chr15	66977247	66977496	+	0.166667	NA	Intergenic	ERVL-E-int|LTR|ERVL	-20856	NR_135687	102723481	Hs.512978	NR_135687	ENSG00000259289	LINC02206	-	long intergenic non-protein coding RNA 2206	ncRNA
62.8-2	chr21	22629663	22630319	+	0.166667	NA	Intergenic	Intergenic	-449293	NR_106746	102466967		NR_106746	ENSG00000275469	MIR6130	hsa-mir-6130	microRNA 6130	ncRNA
44.0334	chr8	137319172	137319596	+	0.166667	NA	Intergenic	L1MDa|LINE|L1	94204	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
21.6334-3	chr17	66740577	66740761	+	0.166667	NA	intron (NM_002737, intron 11 of 16)	intron (NM_002737, intron 11 of 16)	-46403	NR_030364	693219		NR_030364	ENSG00000207943	MIR634	MIRN634|hsa-mir-634	microRNA 634	ncRNA
19.8333-7	chr2	41942703	41943014	+	0.166667	NA	intron (NR_161189, intron 3 of 3)	intron (NR_161189, intron 3 of 3)	-9135	NR_110262	101929723	Hs.369330	NR_110262	ENSG00000234362	LINC01914	-	long intergenic non-protein coding RNA 1914	ncRNA
27.1-11	chr6	64831950	64832261	+	0.166667	NA	intron (NM_001292009, intron 19 of 43)	intron (NM_001292009, intron 19 of 43)	-469313	NM_001271675	441155	Hs.546686	NM_001271675		LOC441155	-	zinc finger CCCH-type domain-containing-like	protein-coding
22.9334	chr14	23611373	23611584	+	0.166667	NA	Intergenic	Intergenic	-18637	NM_001318835	10202	Hs.272499	NM_005794	ENSG00000100867	DHRS2	HEP27|SDR25C1	dehydrogenase/reductase 2	protein-coding
42.8667	chr12	123335933	123336287	+	0.166667	NA	intron (NM_018183, intron 6 of 31)	intron (NM_018183, intron 6 of 31)	28733	NR_107039	102466877		NR_107039	ENSG00000284425	MIR8072	hsa-mir-8072	microRNA 8072	ncRNA
30.0334	chr5	13804790	13805073	+	0.166667	NA	intron (NM_001369, intron 47 of 78)	intron (NM_001369, intron 47 of 78)	139549	NM_001369	1767	Hs.212360	NM_001369	ENSG00000039139	DNAH5	CILD3|DNAHC5|HL1|KTGNR|PCD	dynein axonemal heavy chain 5	protein-coding
35.4667-8	chr3	103939896	103940366	+	0.166667	NA	Intergenic	L1MA5|LINE|L1	-416015	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
16.6334	chr10	37409344	37409443	+	0.166667	NA	Intergenic	AluJr|SINE|Alu	100207	NR_104061	101929520	Hs.144151	NR_104061	ENSG00000235687	LINC00993	-	long intergenic non-protein coding RNA 993	ncRNA
31.5334-4	chr6	101058338	101058628	+	0.166667	NA	Intergenic	MLT1E|LTR|ERVL-MaLR	-177111	NM_001284271	10973	Hs.486031	NM_006828	ENSG00000112249	ASCC3	ASC1p200|HELIC1|RNAH	activating signal cointegrator 1 complex subunit 3	protein-coding
32.5-3	chr12	62518149	62518391	+	0.166667	NA	intron (NM_001278469, intron 8 of 35)	MLT1A0|LTR|ERVL-MaLR	51444	NM_001278469	23041	Hs.389378	NM_015026	ENSG00000061987	MON2	-	MON2 homolog, regulator of endosome-to-Golgi trafficking	protein-coding
62.3667	chr7	122489409	122489992	+	0.166667	NA	intron (NM_001167940, intron 11 of 29)	intron (NM_001167940, intron 11 of 29)	-184950	NM_001024613	389549	Hs.553970	NM_001024613	ENSG00000128610	FEZF1	FEZ|HH22|ZNF312B	FEZ family zinc finger 1	protein-coding
25.2-7	chr18	41402787	41402997	+	0.166667	NA	Intergenic	Intergenic	117785	NR_002838	641516	Hs.116612	NR_002838	ENSG00000267313	KC6	-	keratoconus gene 6	ncRNA
74.4334	chr14	51049053	51049799	+	0.166667	NA	intron (NM_015163, intron 1 of 9)	intron (NM_015163, intron 1 of 9)	46278	NM_015163	114088	Hs.654750	NM_015163	ENSG00000100505	TRIM9	RNF91|SPRING	tripartite motif containing 9	protein-coding
26.8-11	chr3	125053265	125053489	+	0.166667	NA	intron (NM_020733, intron 1 of 16)	intron (NM_020733, intron 1 of 16)	2620	NM_020733	57493	Hs.477420	NM_020733	ENSG00000173706	HEG1	HEG|MST112|MSTP112	heart development protein with EGF like domains 1	protein-coding
34.2667-5	chr10	97827637	97827976	+	0.166667	NA	TTS (NR_108035)	TTS (NR_108035)	21992	NR_108035	100505561	Hs.351904	NR_108035	ENSG00000227356	LINC00866	-	long intergenic non-protein coding RNA 866	ncRNA
19.4333	chr10	108368434	108368624	+	0.166667	NA	Intergenic	Intergenic	-299236	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
27.0334-2	chr3	67467700	67467939	+	0.166667	NA	intron (NM_001177599, intron 9 of 10)	MIRb|SINE|MIR	186795	NM_003848	8801	Hs.644919	NM_003848	ENSG00000172340	SUCLG2	G-SCS|GBETA|GTPSCS	succinate-CoA ligase GDP-forming beta subunit	protein-coding
61.2334	chr1	88143508	88144100	+	0.166667	NA	Intergenic	Intergenic	-540340	NM_001320707	5586	Hs.440833	NM_006256	ENSG00000065243	PKN2	PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7	protein kinase N2	protein-coding
26.8-8	chr2	146419321	146419567	+	0.166667	NA	Intergenic	L1MEc|LINE|L1	-167613	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
47.4-3	chr6	99700263	99700745	+	0.166667	NA	Intergenic	AluJr|SINE|Alu	93730	NM_021620	59336	Hs.287386	NM_021620	ENSG00000112238	PRDM13	MU-MB-20.220|PFM10	PR/SET domain 13	protein-coding
46.5-5	chr8	67323995	67324458	+	0.166667	NA	intron (NM_006421, intron 1 of 38)	AluSc|SINE|Alu	19555	NM_006421	10565	Hs.656902	NM_006421	ENSG00000066777	ARFGEF1	ARFGEP1|BIG1|P200	ADP ribosylation factor guanine nucleotide exchange factor 1	protein-coding
47.6001	chr18	75268070	75268621	+	0.166667	NA	intron (NM_001308210, intron 1 of 1)	intron (NM_001308210, intron 1 of 1)	56816	NM_001308210	10194	Hs.284217	NM_005786	ENSG00000179981	TSHZ1	CAA|NY-CO-33|SDCCAG33|TSH1	teashirt zinc finger homeobox 1	protein-coding
33.4-4	chr2	88336439	88336846	+	0.166667	NA	Intergenic	AluSq2|SINE|Alu	116051	NM_001135649	344167	Hs.131262	NM_001135649	ENSG00000214336	FOXI3	-	forkhead box I3	protein-coding
26.0334	chr18	4081964	4082196	+	0.166667	NA	intron (NM_001242761, intron 2 of 11)	AluSx|SINE|Alu	119727	NR_102696	101410534	Hs.141055	NR_102696	ENSG00000263878	DLGAP1-AS4	-	DLGAP1 antisense RNA 4	ncRNA
17.7	chr10	103831778	103831904	+	0.166667	NA	intron (NM_014631, intron 1 of 13)	L1MB7|LINE|L1	23565	NM_014631	9644	Hs.678727	NM_014631	ENSG00000107957	SH3PXD2A	FISH|SH3MD1|TKS5	SH3 and PX domains 2A	protein-coding
33.2-4	chr11	31151101	31151342	+	0.166667	NA	intron (NM_001367979, intron 9 of 38)	MIRb|SINE|MIR	-158535	NM_020869	341019	Hs.127405	NM_020869	ENSG00000170959	DCDC1	DCDC5	doublecortin domain containing 1	protein-coding
30.5-11	chr3	104856773	104857045	+	0.166667	NA	Intergenic	Intergenic	-509804	NM_001243281	214	Hs.591293	NM_001627	ENSG00000170017	ALCAM	CD166|MEMD	activated leukocyte cell adhesion molecule	protein-coding
32.5-8	chr4	73919356	73919986	+	0.166667	NA	Intergenic	L2a|LINE|L2	50278	NR_046035	2919	Hs.789	NM_001511	ENSG00000163739	CXCL1	FSP|GRO1|GROa|MGSA|MGSA-a|NAP-3|SCYB1	C-X-C motif chemokine ligand 1	protein-coding
34.1667	chr10	4678612	4679009	+	0.166667	NA	promoter-TSS (NR_024475)	promoter-TSS (NR_024475)	-740	NR_024475	100216001	Hs.634869	NR_024475	ENSG00000231298	MANCR	LINC00704	mitotically associated long non coding RNA	ncRNA
49.6001	chr14	60388035	60388474	+	0.166667	NA	Intergenic	L1MD1|LINE|L1	65058	NR_146481	101927729		NR_146481	ENSG00000258556	LINC02322	-	long intergenic non-protein coding RNA 2322	ncRNA
37.9667-4	chr17	79427569	79427956	+	0.166667	NA	intron (NM_001082575, intron 2 of 14)	intron (NM_001082575, intron 2 of 14)	88386	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	RNA binding fox-1 homolog 3	protein-coding
22.7667-4	chr10	118323229	118323607	+	0.166667	NA	intron (NM_022063, intron 7 of 8)	intron (NM_022063, intron 7 of 8)	18906	NM_022063	63877	Hs.105575	NM_022063	ENSG00000165669	FAM204A	C10orf84|bA319I23.1	family with sequence similarity 204 member A	protein-coding
17.1667-2	chr10	55402495	55402674	+	0.166667	NA	intron (NM_001354404, intron 2 of 34)	L1MA4|LINE|L1	-196458	NM_001190478	100463289		NM_001190478	ENSG00000249860	MTRNR2L5	HN5	MT-RNR2 like 5	protein-coding
17.0667-12	chr3	33663289	33663487	+	0.166667	NA	intron (NM_001365634, intron 7 of 35)	intron (NM_001365634, intron 7 of 35)	-3709	NM_001207044	23122	Hs.108614	NM_015097	ENSG00000163539	CLASP2	-	cytoplasmic linker associated protein 2	protein-coding
19.7-10	chr4	134310580	134310715	+	0.166667	NA	Intergenic	Intergenic	-108858	NM_001363585	132430	Hs.49889	NM_001114734	ENSG00000254535	PABPC4L	-	poly(A) binding protein cytoplasmic 4 like	protein-coding
37.9667-2	chr1	115557056	115557336	+	0.166667	NA	Intergenic	AluJr|SINE|Alu	-84774	NM_001172411	81839	Hs.515130	NM_138959	ENSG00000173218	VANGL1	KITENIN|LPP2|STB2|STBM2	VANGL planar cell polarity protein 1	protein-coding
37.8-10	chr7	24135712	24135992	+	0.166667	NA	Intergenic	Intergenic	-148338	NM_000905	4852	Hs.1832	NM_000905	ENSG00000122585	NPY	PYY4	neuropeptide Y	protein-coding
38.5001	chr1	212283510	212283830	+	0.166667	NA	intron (NR_125984, intron 1 of 3)	intron (NR_125984, intron 1 of 3)	1351	NR_125984	101929541	Hs.632493	NR_125982	ENSG00000226251	LINC02608	-	long intergenic non-protein coding RNA 2608	ncRNA
51.9-2	chr3	120842552	120843109	+	0.166667	NA	Intergenic	Intergenic	-6473	NR_135571	101926983	Hs.553055	NR_135570	ENSG00000243593	LINC02049	-	long intergenic non-protein coding RNA 2049	ncRNA
20.9-21	chr6	51529380	51529550	+	0.166667	NA	Intergenic	LTR8|LTR|ERV1	-92405	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
54.8334-2	chr7	126333392	126333795	+	0.166667	NA	Intergenic	Intergenic	724591	NR_030323	693177		NR_030323	ENSG00000207692	MIR592	MIRN592|hsa-mir-592|mir-592	microRNA 592	ncRNA
19.2667-3	chr12	65909089	65909233	+	0.166667	NA	intron (NM_001300918, intron 3 of 4)	intron (NM_001300918, intron 3 of 4)	-26836	NR_158984	100129940	Hs.685856	NR_120478	ENSG00000197301	HMGA2-AS1	-	HMGA2 antisense RNA 1	ncRNA
23.1-6	chr17	80003432	80003570	+	0.166667	NA	intron (NM_019020, intron 3 of 11)	intron (NM_019020, intron 3 of 11)	32371	NM_019020	125058	Hs.369819	NM_019020	ENSG00000167291	TBC1D16	-	TBC1 domain family member 16	protein-coding
27.5667-6	chr8	128179451	128179753	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	29486	NR_031613	100302281		NR_031613	ENSG00000221261	MIR1208	MIRN1208|hsa-mir-1208	microRNA 1208	ncRNA
36.5333-3	chr3	40769093	40769528	+	0.166667	NA	Intergenic	Intergenic	244350	NM_001098414	285268	Hs.19977	NM_198484	ENSG00000172888	ZNF621	-	zinc finger protein 621	protein-coding
22.1334	chr15	69625525	69625657	+	0.166667	NA	intron (NR_126437, intron 2 of 5)	intron (NR_126437, intron 2 of 5)	33391	NR_126437	104472713	Hs.430824	NR_126437	ENSG00000245750	PCAT29	-	prostate cancer associated transcript 29	ncRNA
38.4667-5	chr7	130725287	130725517	+	0.166667	NA	Intergenic	L1M5|LINE|L1	8631	NM_138693	136259	Hs.125240	NM_138693	ENSG00000266265	KLF14	BTEB5	Kruppel like factor 14	protein-coding
19.0333-7	chr16	13543528	13543736	+	0.166667	NA	Intergenic	Intergenic	-376525	NM_005236	2072	Hs.567265	NM_005236	ENSG00000175595	ERCC4	ERCC11|FANCQ|RAD1|XFEPS|XPF	ERCC excision repair 4, endonuclease catalytic subunit	protein-coding
19.3-13	chr7	31431093	31431311	+	0.166667	NA	Intergenic	Intergenic	-82869	NM_001257967	223075	Hs.224269	NM_194300	ENSG00000180347	ITPRID1	CCDC129	ITPR interacting domain containing 1	protein-coding
35.6-15	chr6	146905668	146906099	+	0.166667	NA	intron (NR_034115, intron 7 of 10)	intron (NR_034115, intron 7 of 10)	-102059	NR_003954	729176	Hs.486708	NR_003954		KATNBL1P6	-	katanin regulatory subunit B1 like 1 pseudogene 6	pseudo
57.7334	chr1	84832391	84832914	+	0.166667	NA	intron (NM_012152, intron 2 of 2)	intron (NM_012152, intron 2 of 2)	60554	NM_012152	23566	Hs.527909	NM_012152	ENSG00000171517	LPAR3	EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3	lysophosphatidic acid receptor 3	protein-coding
25.6334	chr6	22090288	22090476	+	0.166667	NA	intron (NR_015410, intron 8 of 11)	L1ME1|LINE|L1	56811	NR_034143	729177	Hs.730673	NR_034143	ENSG00000260455	NBAT1	CASC14|NBAT-1	neuroblastoma associated transcript 1	ncRNA
40.5334	chr20	54875403	54875690	+	0.166667	NA	Intergenic	Intergenic	399953	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
21.1-12	chr7	80301223	80301433	+	0.166667	NA	Intergenic	Intergenic	73111	NR_110075	101927269	Hs.583232	NR_110075		LOC101927269	-	uncharacterized LOC101927269	ncRNA
43.2667-8	chr8	119263848	119264371	+	0.166667	NA	Intergenic	Intergenic	-17252	NR_149112	105375726	Hs.666095	NR_149111		MAL2-AS1	-	MAL2 antisense RNA 1	ncRNA
55.4666	chr10	78175881	78176636	+	0.166667	NA	Intergenic	MER102a|DNA|hAT-Charlie	-72367	NR_038985	100132987	Hs.55047	NR_038985	ENSG00000230417	LINC00856	-	long intergenic non-protein coding RNA 856	ncRNA
26.7334-3	chr6	82355667	82355949	+	0.166667	NA	Intergenic	Intergenic	-7398	NM_006670	7162	Hs.71947	NM_006670	ENSG00000146242	TPBG	5T4|5T4AG|M6P1|WAIF1	trophoblast glycoprotein	protein-coding
32.1334-2	chr2	172352210	172352519	+	0.166667	NA	Intergenic	Intergenic	-74972	NM_001316306	3655	Hs.133397	NM_000210	ENSG00000091409	ITGA6	CD49f|ITGA6B|VLA-6	integrin subunit alpha 6	protein-coding
34.8333-6	chr8	75907981	75908250	+	0.166667	NA	Intergenic	MER21B|LTR|ERVL	368147	NM_004133	3174	Hs.241529	NM_004133	ENSG00000164749	HNF4G	NR2A2|NR2A3	hepatocyte nuclear factor 4 gamma	protein-coding
30.6333	chr1	48995566	48995979	+	0.166667	NA	intron (NM_001323575, intron 5 of 12)	L2a|LINE|L2	-218803	NR_146232	79656	Hs.475348	NM_024603	ENSG00000162373	BEND5	C1orf165	BEN domain containing 5	protein-coding
19.2333-11	chr4	37961246	37961586	+	0.166667	NA	TTS (NM_006607)	TTS (NM_006607)	1018	NM_006607	10744	Hs.668806	NM_006607	ENSG00000250254	PTTG2	-	pituitary tumor-transforming 2	protein-coding
53.8668	chr5	102296423	102296830	+	0.166667	NA	promoter-TSS (NM_180991)	promoter-TSS (NM_180991)	-342	NM_180991	353189	Hs.127648	NM_180991	ENSG00000173930	SLCO4C1	OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20	solute carrier organic anion transporter family member 4C1	protein-coding
46.9334-2	chr2	117492162	117492595	+	0.166667	NA	Intergenic	Intergenic	-322313	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
33.7-8	chr15	101709152	101709403	+	0.166667	NA	intron (NM_152334, intron 5 of 18)	intron (NM_152334, intron 5 of 18)	15196	NM_152334	123283	Hs.657163	NM_152334	ENSG00000185418	TARSL2	-	threonyl-tRNA synthetase like 2	protein-coding
22.7333	chr12	52629748	52629985	+	0.166667	NA	Intergenic	Intergenic	-11307	NM_175068	319101	Hs.55410	NM_175068	ENSG00000186049	KRT73	IRT6IRS3|K6IRS3|KRT6IRS3	keratin 73	protein-coding
35.9-6	chr22	39365238	39365616	+	0.166667	NA	intron (NM_145738, intron 1 of 3)	MIRb|SINE|MIR	1257	NM_145738	9145	Hs.216226	NM_004711	ENSG00000100321	SYNGR1	-	synaptogyrin 1	protein-coding
31.2-12	chr22	26881535	26881914	+	0.166667	NA	TTS (NR_146604)	TTS (NR_146604)	21513	NR_146604	110091768	Hs.639900	NR_146604		LOC110091768	-	uncharacterized LOC110091768	ncRNA
41.1-3	chr8	122467627	122468180	+	0.166667	NA	intron (NR_131202, intron 2 of 3)	L1PREC2|LINE|L1	100741	NR_131202	105375734	Hs.628341	NR_131202		SMILR	-	smooth muscle induced lncRNA, enhancer of proliferation	ncRNA
43.2667-4	chr15	25782748	25783364	+	0.166667	NA	intron (NM_024490, intron 1 of 20)	AluJr|SINE|Alu	65769	NR_039865	100616474		NR_039865	ENSG00000266517	MIR4715	-	microRNA 4715	ncRNA
36.4334	chr10	81028294	81028759	+	0.166667	NA	Intergenic	L1PA16|LINE|L1	378729	NR_155749	105378386	Hs.531456	NR_155749		LINC02655	-	long intergenic non-protein coding RNA 2655	ncRNA
23.6334-5	chr5	41152794	41152968	+	0.166667	NA	intron (NM_000065, intron 15 of 17)	intron (NM_000065, intron 15 of 17)	60651	NM_000065	729	Hs.481992	NM_000065	ENSG00000039537	C6	-	complement C6	protein-coding
13.6334	chr16	63779816	63779944	+	0.166667	NA	Intergenic	Intergenic	1342183	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
62.4001	chr11	47116834	47117241	+	0.166667	NA	intron (NM_001003677, intron 3 of 8)	L1PA6|LINE|L1	59842	NM_032389	84364	Hs.436204	NM_032389	ENSG00000149182	ARFGAP2	IRZ|NBLA10535|ZFP289|ZNF289	ADP ribosylation factor GTPase activating protein 2	protein-coding
30.9001	chr11	18579239	18579424	+	0.166667	NA	intron (NM_001040697, intron 1 of 11)	MIRb|SINE|MIR	187	NM_001261385	55293	Hs.407991	NM_018314	ENSG00000151116	UEVLD	ATTP|UEV3	UEV and lactate/malate dehyrogenase domains	protein-coding
24.8667-7	chr4	166404058	166404415	+	0.166667	NA	Intergenic	L1MB3|LINE|L1	530999	NM_012464	7092	Hs.106513	NM_012464	ENSG00000038295	TLL1	ASD6|TLL	tolloid like 1	protein-coding
24.7667-2	chr13	30366240	30366434	+	0.166667	NA	intron (NR_024464, intron 3 of 4)	intron (NR_024464, intron 3 of 4)	7577	NR_024464	100188949	Hs.439791	NR_024464	ENSG00000238121	LINC00426	-	long intergenic non-protein coding RNA 426	ncRNA
42.2334-2	chr4	189009758	189010162	+	0.166667	NA	Intergenic	Intergenic	233303	NR_149102	105377610		NR_149102	ENSG00000251619	LINC02508	-	long intergenic non-protein coding RNA 2508	ncRNA
39.2-9	chr8	35306559	35306835	+	0.166667	NA	intron (NM_080872, intron 1 of 16)	intron (NM_080872, intron 1 of 16)	71222	NM_080872	137970	Hs.238889	NM_080872	ENSG00000156687	UNC5D	PRO34692|Unc5h4	unc-5 netrin receptor D	protein-coding
34.9667-2	chr3	77465595	77465877	+	0.166667	NA	intron (NM_001290039, intron 2 of 26)	intron (NM_001290039, intron 2 of 26)	367724	NM_001128929	6092	Hs.13305	NM_002942	ENSG00000185008	ROBO2	SAX3	roundabout guidance receptor 2	protein-coding
45.7001-2	chr13	60943601	60943935	+	0.166667	NA	Intergenic	Intergenic	256112	NR_036128	100422973		NR_036128	ENSG00000266663	MIR3169	-	microRNA 3169	ncRNA
60.2333	chr11	108802769	108803203	+	0.166667	NA	intron (NM_004398, intron 13 of 17)	intron (NM_004398, intron 13 of 17)	137917	NM_004398	1662	Hs.591931	NM_004398	ENSG00000178105	DDX10	Dbp4|HRH-J8	DEAD-box helicase 10	protein-coding
23.6-7	chr18	21157636	21157849	+	0.166667	NA	Intergenic	L1M2|LINE|L1	-45929	NM_005406	6093	Hs.306307	NM_005406	ENSG00000067900	ROCK1	P160ROCK|ROCK-I	Rho associated coiled-coil containing protein kinase 1	protein-coding
50.1667	chr6	23522142	23522574	+	0.166667	NA	Intergenic	Intergenic	-603857	NM_080723	140767	Hs.726270	NM_080723	ENSG00000152954	NRSN1	VMP|p24	neurensin 1	protein-coding
32.6667-4	chr14	61376331	61376677	+	0.166667	NA	intron (NM_006255, intron 1 of 13)	intron (NM_006255, intron 1 of 13)	55061	NM_006255	5583	Hs.333907	NM_006255	ENSG00000027075	PRKCH	PKC-L|PKCL|PRKCL|nPKC-eta	protein kinase C eta	protein-coding
20.2667-5	chr15	39797029	39797157	+	0.166667	NA	Intergenic	Intergenic	14187	NR_135665	105370941	Hs.587843	NR_135665	ENSG00000261136	LOC105370941	-	uncharacterized LOC105370941	ncRNA
26.0333-12	chr8	82727665	82727972	+	0.166667	NA	Intergenic	L1PA16|LINE|L1	-184286	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
68.2333	chr7	77433280	77434077	+	0.166667	NA	Intergenic	L2a|LINE|L2	-17329	NM_001350898	54103	Hs.186649	NM_017439	ENSG00000186088	GSAP	PION	gamma-secretase activating protein	protein-coding
23.1666	chr16	11520971	11521210	+	0.166667	NA	intron (NM_001370704, intron 3 of 66)	Tigger12c|DNA|TcMar-Tigger	6157	NM_001370704	400499	Hs.459937	NM_001370704	ENSG00000188897	LOC400499	-	putative uncharacterized protein LOC400499	protein-coding
38.2333	chr14	84277075	84277441	+	0.166667	NA	Intergenic	Intergenic	-994674	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
38.3-5	chr7	8279273	8279855	+	0.166667	NA	intron (NR_125740, intron 3 of 5)	intron (NR_125740, intron 3 of 5)	-16952	NM_004968	3382	Hs.487561	NM_004968	ENSG00000003147	ICA1	ICA69|ICAp69	islet cell autoantigen 1	protein-coding
53.6001-2	chr19	5732212	5732784	+	0.166667	NA	intron (NM_152784, intron 4 of 21)	AluY|SINE|Alu	11861	NM_152784	257062	Hs.631842	NM_152784	ENSG00000174898	CATSPERD	TMEM146	cation channel sperm associated auxiliary subunit delta	protein-coding
35.8001-2	chr21	19474895	19475109	+	0.166667	NA	Intergenic	Intergenic	424753	NR_146910	105372746	Hs.580899	NR_146910	ENSG00000233480	LINC01683	C21orf40	long intergenic non-protein coding RNA 1683	ncRNA
50.9334	chr14	43075829	43076318	+	0.166667	NA	Intergenic	Intergenic	1431210	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
26.0667	chr10	21797850	21798347	+	0.166667	NA	intron (NM_022365, intron 9 of 11)	intron (NM_022365, intron 9 of 11)	205632	NM_022365	64215	Hs.499000	NM_022365	ENSG00000136770	DNAJC1	DNAJL1|ERdj1|HTJ1|MTJ1	DnaJ heat shock protein family (Hsp40) member C1	protein-coding
39.9-4	chrX	108522228	108522762	+	0.166667	NA	intron (NM_033380, intron 1 of 50)	L1MB8|LINE|L1	82657	NM_000495	1287	Hs.369089	NM_000495	ENSG00000188153	COL4A5	ASLN|ATS|ATS1|CA54	collagen type IV alpha 5 chain	protein-coding
45.6999-2	chr6	28470019	28470345	+	0.166667	NA	Intergenic	Intergenic	-26691	NM_001012455	222696	Hs.721841	NM_001012455	ENSG00000187987	ZSCAN23	ZNF390|ZNF453|dJ29K1.3|dJ29K1.3.1	zinc finger and SCAN domain containing 23	protein-coding
33.2334	chr1	150868844	150869171	+	0.166667	NA	intron (NM_001350224, intron 1 of 22)	AluJr|SINE|Alu	7592	NM_001350224	405	Hs.632446	NM_001668	ENSG00000143437	ARNT	HIF-1-beta|HIF-1beta|HIF1-beta|HIF1B|HIF1BETA|TANGO|bHLHe2	aryl hydrocarbon receptor nuclear translocator	protein-coding
36.3333-8	chr7	106881071	106881601	+	0.166667	NA	intron (NM_001282426, intron 6 of 10)	MIRc|SINE|MIR	15857	NM_002649	5294	Hs.32942	NM_002649	ENSG00000105851	PIK3CG	PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma	protein-coding
24.7-15	chr7	29282415	29282646	+	0.166667	NA	intron (NM_001293072, intron 1 of 12)	intron (NM_001293072, intron 1 of 12)	-73560	NR_120522	102724484	Hs.638665	NR_120522		LOC102724484	-	uncharacterized LOC102724484	ncRNA
32.6666-3	chr3	179147518	179147879	+	0.166667	NA	promoter-TSS (NM_006218)	promoter-TSS (NM_006218)	275	NR_125401	101928739	Hs.434553	NR_125401	ENSG00000229102	LOC101928739	-	uncharacterized LOC101928739	ncRNA
21.2333-8	chr19	7838384	7838617	+	0.166667	NA	intron (NM_001159944, intron 1 of 19)	L1MC3|LINE|L1	8282	NM_145245	115704	Hs.26870	NM_145245	ENSG00000142459	EVI5L	-	ecotropic viral integration site 5 like	protein-coding
40.2-3	chr13	108555410	108555972	+	0.166667	NA	Intergenic	L1MA6|LINE|L1	-40214	NM_015011	23026	Hs.656587	NM_015011	ENSG00000041515	MYO16	MYAP3|MYR8|Myo16b|NYAP3|PPP1R107	myosin XVI	protein-coding
38.1999	chr4	118261429	118261924	+	0.166667	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-17086	NR_034010	100093630	Hs.535762	NR_003584	ENSG00000269893	SNHG8	LINC00060|NCRNA00060	small nucleolar RNA host gene 8	ncRNA
27.1666-2	chr14	80807682	80808115	+	0.166667	NA	intron (NM_152446, intron 13 of 24)	L1M2|LINE|L1	133840	NM_152446	145508	Hs.162889	NM_152446	ENSG00000100629	CEP128	C14orf145|C14orf61|LEDP/132	centrosomal protein 128	protein-coding
30.1333-10	chr7	934697	935058	+	0.166667	NA	intron (NM_006869, intron 2 of 10)	intron (NM_006869, intron 2 of 10)	-7661	NM_001284310	11033	Hs.602573	NM_006869	ENSG00000105963	ADAP1	CENTA1|GCS1L|p42IP4	ArfGAP with dual PH domains 1	protein-coding
19.2-12	chr5	139253757	139253872	+	0.166667	NA	Intergenic	MLT1F|LTR|ERVL-MaLR	-19938	NR_003141	724102	Hs.268939	NR_003141		SNHG4	NCRNA00059|U19H	small nucleolar RNA host gene 4	ncRNA
39.6334-3	chrX	88453836	88454243	+	0.166667	NA	Intergenic	AluY|SINE|Alu	-293186	NM_033048	53336	Hs.458292	NM_033048	ENSG00000147183	CPXCR1	CT77	CPX chromosome region candidate 1	protein-coding
30.1	chr1	65732554	65732856	+	0.166667	NA	Intergenic	Intergenic	-59805	NM_001297440	5142	Hs.198072	NM_002600	ENSG00000184588	PDE4B	DPDE4|PDEIVB	phosphodiesterase 4B	protein-coding
34.3334-2	chr2	63694482	63694877	+	0.166667	NA	Intergenic	Intergenic	105528	NM_001199112	4190	Hs.526521	NM_005917	ENSG00000014641	MDH1	HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2	malate dehydrogenase 1	protein-coding
67.6668	chr16	47432308	47432721	+	0.166667	NA	intron (NM_030790, intron 5 of 17)	intron (NM_030790, intron 5 of 17)	28549	NM_030790	81533	Hs.42217	NM_030790	ENSG00000129636	ITFG1	2310047C21Rik|CDA08|LNKN-1|TIP	integrin alpha FG-GAP repeat containing 1	protein-coding
59.1334	chr6	42957278	42957753	+	0.166667	NA	intron (NR_134890, intron 2 of 4)	AluSx|SINE|Alu	-3239	NM_001318865	27232	Hs.144914	NM_018960	ENSG00000124713	GNMT	HEL-S-182mP	glycine N-methyltransferase	protein-coding
15.4333-7	chr16	84883138	84883356	+	0.166667	NA	intron (NM_031476, intron 13 of 14)	intron (NM_031476, intron 13 of 14)	63262	NM_031476	83716	Hs.513779	NM_031476	ENSG00000103196	CRISPLD2	CRISP11|LCRISP2|LGL1	cysteine rich secretory protein LCCL domain containing 2	protein-coding
28.0334	chr10	95641643	95641929	+	0.166667	NA	intron (NM_001323412, intron 2 of 16)	AluJo|SINE|Alu	14925	NM_002860	5832	Hs.500645	NM_002860	ENSG00000059573	ALDH18A1	ADCL3|ARCL3A|GSAS|P5CS|PYCS|SPG9|SPG9A|SPG9B	aldehyde dehydrogenase 18 family member A1	protein-coding
27.5333-2	chr1	211061254	211061610	+	0.166667	NA	intron (NM_002238, intron 5 of 10)	L1MA3|LINE|L1	71942	NR_046784	100874296	Hs.737764	NR_046784		KCNH1-IT1	-	KCNH1 intronic transcript 1	ncRNA
26.2667-5	chr5	5559271	5559523	+	0.166667	NA	Intergenic	MER65D|LTR|ERV1	136720	NM_015325	23379	Hs.449296	NM_015325	ENSG00000164151	ICE1	KIAA0947	interactor of little elongation complex ELL subunit 1	protein-coding
24.1334	chr13	76647212	76647397	+	0.166667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	239101	NM_138444	115207	Hs.644125	NM_138444	ENSG00000178695	KCTD12	C13orf2|PFET1|PFETIN	potassium channel tetramerization domain containing 12	protein-coding
18.4667-2	chr10	107604867	107604977	+	0.166667	NA	Intergenic	L1MEc|LINE|L1	-440216	NM_001206570	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
50.6-2	chr3	155241595	155241972	+	0.166667	NA	intron (NR_125399, intron 2 of 2)	intron (NR_125399, intron 2 of 2)	838	NR_125399	101928190	Hs.121410	NR_125399	ENSG00000241336	LINC01487	-	long intergenic non-protein coding RNA 1487	ncRNA
24.7334-2	chr20	58130842	58131223	+	0.166667	NA	Intergenic	Intergenic	-19870	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding
33.7334-2	chr14	45827923	45828212	+	0.166667	NA	Intergenic	SATR1|Satellite|Satellite	-112465	NR_146547	105370479		NR_146546	ENSG00000258616	LINC02303	-	long intergenic non-protein coding RNA 2303	ncRNA
35.9999	chr1	78832107	78832632	+	0.166667	NA	Intergenic	Intergenic	174361	NM_022159	64123	Hs.132314	NM_022159	ENSG00000162618	ADGRL4	ELTD1|ETL|KPG_003	adhesion G protein-coupled receptor L4	protein-coding
72.3001	chr7	41220910	41221406	+	0.166667	NA	Intergenic	Intergenic	119554	NR_110832	101928773	Hs.382363	NR_110832	ENSG00000224017	LINC01449	-	long intergenic non-protein coding RNA 1449	ncRNA
54.5334	chr1	4837253	4837593	+	0.166667	NA	Intergenic	MLT1E|LTR|ERVL-MaLR	182814	NM_001042478	55966	Hs.12473	NM_018836	ENSG00000196581	AJAP1	MOT8|SHREW-1|SHREW1	adherens junctions associated protein 1	protein-coding
14	chr11	131197557	131197718	+	0.166667	NA	Intergenic	Intergenic	-172978	NM_001048209	50863	Hs.504352	NM_016522	ENSG00000182667	NTM	CEPU-1|HNT|IGLON2|NTRI	neurotrimin	protein-coding
26.2333-13	chr6	5770317	5770634	+	0.166667	NA	intron (NM_006567, intron 6 of 6)	MIR3|SINE|MIR	-75203	NR_110842	101927950	Hs.571136	NR_110842	ENSG00000270174	LOC101927950	-	uncharacterized LOC101927950	ncRNA
19.1-13	chrX	39233060	39233193	+	0.166667	NA	Intergenic	Intergenic	94236	NR_038968	286442	Hs.638478	NR_038968	ENSG00000235304	LINC01281	-	long intergenic non-protein coding RNA 1281	ncRNA
26.1333-4	chr13	80898689	80898999	+	0.166667	NA	Intergenic	L1MA9|LINE|L1	-119547	NR_125770	103724386	Hs.539622	NR_125770		LINC00377	TCONS_00021861	long intergenic non-protein coding RNA 377	ncRNA
44.7667	chr10	31982191	31982489	+	0.166667	NA	Intergenic	Intergenic	-53464	NM_001270695	94134	Hs.499264	NM_018287	ENSG00000165322	ARHGAP12	-	Rho GTPase activating protein 12	protein-coding
21.3-16	chr5	54173129	54173269	+	0.166667	NA	intron (NM_019087, intron 1 of 4)	AluSq2|SINE|Alu	137374	NM_019087	54622	Hs.659125	NM_019087	ENSG00000185305	ARL15	ARFRP2	ADP ribosylation factor like GTPase 15	protein-coding
26.1-17	chr9	89068688	89068919	+	0.166667	NA	intron (NM_016848, intron 5 of 11)	intron (NM_016848, intron 5 of 11)	77335	NM_005226	1903	Hs.585118	NM_005226	ENSG00000213694	S1PR3	EDG-3|EDG3|LPB3|S1P3	sphingosine-1-phosphate receptor 3	protein-coding
51.3001-3	chr3	25309327	25309644	+	0.166667	NA	intron (NM_001290216, intron 4 of 10)	intron (NM_001290216, intron 4 of 10)	-31317	NM_001290300	5915	Hs.543218	NM_000965	ENSG00000077092	RARB	HAP|MCOPS12|NR1B2|RARbeta1|RRB2	retinoic acid receptor beta	protein-coding
10.4667-2	chr1	172579725	172579875	+	0.166667	NA	intron (NM_001282751, intron 15 of 21)	intron (NM_001282751, intron 15 of 21)	46650	NM_014283	51430	Hs.204559	NM_014283	ENSG00000094975	SUCO	C1orf9|CH1|OPT|SLP1	SUN domain containing ossification factor	protein-coding
41.8666	chr11	29041868	29042251	+	0.166667	NA	Intergenic	MER45B|DNA|hAT-Tip100	-552354	NR_149107	105376606	Hs.577275	NR_149106	ENSG00000255117	LINC02546	-	long intergenic non-protein coding RNA 2546	ncRNA
14.8334	chr8	92726728	92726913	+	0.166667	NA	intron (NR_046114, intron 1 of 2)	intron (NR_046114, intron 1 of 2)	59240	NR_046114	441369	Hs.521683	NR_046114	ENSG00000248858	FLJ46284	-	uncharacterized LOC441369	ncRNA
27.2-4	chr12	124801311	124801538	+	0.166667	NA	intron (NR_160424, intron 7 of 11)	L1MB5|LINE|L1	38247	NM_001367982	949	Hs.731377	NM_005505	ENSG00000073060	SCARB1	CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1	scavenger receptor class B member 1	protein-coding
11.3333-5	chr4	93712500	93712623	+	0.166667	NA	intron (NM_001286838, intron 13 of 14)	L2c|LINE|L2	-116192	NM_005172	474	Hs.532680	NM_005172	ENSG00000172238	ATOH1	ATH1|HATH1|MATH-1|bHLHa14	atonal bHLH transcription factor 1	protein-coding
36.6667-5	chr7	126339638	126340045	+	0.166667	NA	Intergenic	MLT2D|LTR|ERVL	718343	NR_030323	693177		NR_030323	ENSG00000207692	MIR592	MIRN592|hsa-mir-592|mir-592	microRNA 592	ncRNA
22.3667-4	chr14	80868575	80868765	+	0.166667	NA	intron (NM_152446, intron 8 of 24)	L1M3e|LINE|L1	73068	NM_152446	145508	Hs.162889	NM_152446	ENSG00000100629	CEP128	C14orf145|C14orf61|LEDP/132	centrosomal protein 128	protein-coding
13.5667-3	chr2	66950029	66950163	+	0.166667	NA	intron (NR_110169, intron 4 of 4)	intron (NR_110169, intron 4 of 4)	-27606	NR_110600	102724321	Hs.146803	NR_110600	ENSG00000232688	LINC01628	-	long intergenic non-protein coding RNA 1628	ncRNA
34.9334	chr2	226886374	226886585	+	0.166667	NA	intron (NM_001349069, intron 5 of 8)	intron (NM_001349069, intron 5 of 8)	50425	NM_001167608	84236	Hs.471514	NM_032276	ENSG00000144468	RHBDD1	RHBDL4|RRP4	rhomboid domain containing 1	protein-coding
36.3667-4	chr9	2497048	2497315	+	0.166667	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	-124606	NM_001322225	7436	Hs.370422	NM_003383	ENSG00000147852	VLDLR	CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH	very low density lipoprotein receptor	protein-coding
21.1666	chr16	663007	663221	+	0.166667	NA	intron (NM_145294, intron 34 of 40)	(TTTTTTG)n|Simple_repeat|Simple_repeat	-4969	NM_001352287	89941	Hs.513242	NM_138769	ENSG00000140983	RHOT2	ARHT2|C16orf39|MIRO-2|MIRO2|RASL	ras homolog family member T2	protein-coding
24.2334-3	chr18	76849892	76850087	+	0.166667	NA	intron (NM_001306089, intron 2 of 30)	intron (NM_001306089, intron 2 of 30)	25829	NM_007345	7776	Hs.719137	NM_007345	ENSG00000130856	ZNF236	ZNF236A|ZNF236B	zinc finger protein 236	protein-coding
23.9667-12	chr8	33542771	33543002	+	0.166667	NA	Intergenic	L1MA4A|LINE|L1	24242	NM_024787	79845	Hs.151237	NM_024787	ENSG00000133874	RNF122	-	ring finger protein 122	protein-coding
34.7667-9	chr6	94611076	94611360	+	0.166667	NA	Intergenic	L1PA16|LINE|L1	892915	NR_152795	643432	Hs.509936	NR_015362		TSG1	-	tumor suppressor TSG1	ncRNA
24.0334-3	chr15	43027900	43028144	+	0.166667	NA	intron (NM_174916, intron 21 of 46)	intron (NM_174916, intron 21 of 46)	78016	NM_174916	197131	Hs.591121	NM_174916	ENSG00000159459	UBR1	JBS	ubiquitin protein ligase E3 component n-recognin 1	protein-coding
22.5-3	chr2	27230785	27231036	+	0.166667	NA	intron (NM_001306079, intron 14 of 42)	intron (NM_001306079, intron 14 of 42)	13520	NM_001306079	790	Hs.377010	NM_004341	ENSG00000084774	CAD	CDG1Z|EIEE50|GATD4	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	protein-coding
49-6	chr3	7578821	7579285	+	0.166667	NA	exon (NM_181874, exon 8 of 11)	exon (NM_181874, exon 8 of 11)	-43769	NR_046606	100873937	Hs.570608	NR_046606	ENSG00000236202	GRM7-AS1	-	GRM7 antisense RNA 1	ncRNA
18.6667-14	chr7	37658475	37658675	+	0.166667	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-25191	NM_001329994	353345	Hs.563492	NM_181791	ENSG00000187037	GPR141	PGR13	G protein-coupled receptor 141	protein-coding
39.7667-7	chr5	127733571	127733961	+	0.166667	NA	intron (NM_001317938, intron 2 of 6)	MLT1N2|LTR|ERVL-MaLR	30377	NM_001317938	728586	Hs.582532	NM_001317938	ENSG00000230561	CCDC192	LINC01183	coiled-coil domain containing 192	protein-coding
31.6334-5	chr2	143778171	143778635	+	0.166667	NA	Intergenic	Intergenic	-158664	NR_110237	101928386	Hs.668251	NR_110237	ENSG00000232377	LOC101928386	-	uncharacterized LOC101928386	ncRNA
50.6333	chr7	30595770	30596198	+	0.166667	NA	intron (NM_002047, intron 1 of 16)	intron (NM_002047, intron 1 of 16)	1106	NM_002047	2617	Hs.404321	NM_002047	ENSG00000106105	GARS	CMT2D|DSMAV|GlyRS|HMN5|SMAD1	glycyl-tRNA synthetase	protein-coding
37.7-4	chr2	122257448	122257882	+	0.166667	NA	Intergenic	Intergenic	502014	NM_004622	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding
18.1	chr1	68296553	68296795	+	0.166667	NA	Intergenic	Intergenic	-64128	NM_001193334	79971	Hs.647659	NM_024911	ENSG00000116729	WLS	C1orf139|EVI|GPR177|MRP|mig-14	Wnt ligand secretion mediator	protein-coding
28.9-3	chr11	73104902	73105096	+	0.166667	NA	intron (NM_014824, intron 2 of 19)	intron (NM_014824, intron 2 of 19)	37319	NM_014824	9873	Hs.744959	NM_014824	ENSG00000137478	FCHSD2	NWK|NWK1|SH3MD3	FCH and double SH3 domains 2	protein-coding
25.8667-5	chr19	6123961	6124165	+	0.166667	NA	Intergenic	Intergenic	-11570	NM_001289180	81616	Hs.465720	NM_030924	ENSG00000130377	ACSBG2	BGR|BRGL|PRTD-NY3|PRTDNY3	acyl-CoA synthetase bubblegum family member 2	protein-coding
42.2666-2	chr2	52928143	52928447	+	0.166667	NA	Intergenic	L1MB2|LINE|L1	-225680	NR_039630	100616431		NR_039630	ENSG00000264975	MIR4431	-	microRNA 4431	ncRNA
57.6666	chr1	10484567	10484983	+	0.166667	NA	intron (NM_004565, intron 1 of 8)	MLT1F2|LTR|ERVL-MaLR	9825	NM_004565	5195	Hs.149983	NM_004565	ENSG00000142655	PEX14	NAPP2|PBD13A|Pex14p|dJ734G22.2	peroxisomal biogenesis factor 14	protein-coding
25.5-6	chr5	127595107	127595314	+	0.166667	NA	Intergenic	Intergenic	-53811	NM_001048252	613212	Hs.66194	NM_001048252	ENSG00000205279	CTXN3	KABE	cortexin 3	protein-coding
23.9667-4	chr20	56951265	56951512	+	0.166667	NA	Intergenic	Intergenic	-262308	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA
46.2-7	chr8	127030731	127031162	+	0.166667	NA	Intergenic	L1MC1|LINE|L1	17792	NR_045262	100750225	Hs.571530	NR_045262	ENSG00000253438	PCAT1	PCA1|PCAT-1	prostate cancer associated transcript 1	ncRNA
18-9	chr2	37434419	37434666	+	0.166667	NA	Intergenic	L1PB1|LINE|L1	89912	NM_012413	25797	Hs.79033	NM_012413	ENSG00000115828	QPCT	GCT|QC|sQC	glutaminyl-peptide cyclotransferase	protein-coding
47.5334-3	chr7	125055742	125056279	+	0.166667	NA	intron (NR_125718, intron 4 of 10)	UCON55|DNA|TcMar-Tigger	-126027	NR_003102	25913	Hs.31968	NM_015450	ENSG00000128513	POT1	CMM10|GLM9|HPOT1	protection of telomeres 1	protein-coding
35.5333-5	chr16	9340930	9341373	+	0.166667	NA	Intergenic	Intergenic	-14437	NR_135195	101927009	Hs.537273	NR_135195	ENSG00000261617	LINC02177	-	long intergenic non-protein coding RNA 2177	ncRNA
54.8334	chr7	119457715	119458205	+	0.166667	NA	Intergenic	Charlie1a|DNA|hAT-Charlie	449415	NR_131962	105375475	Hs.566654	NR_131960	ENSG00000225546	LINC02476	LVCAT5	long intergenic non-protein coding RNA 2476	ncRNA
40.0334	chr1	54030680	54031012	+	0.166667	NA	3' UTR (NM_001305049, exon 8 of 8)	3' UTR (NM_001305049, exon 8 of 8)	-12660	NM_001276392	388633	Hs.439583	NM_001010978	ENSG00000203985	LDLRAD1	-	low density lipoprotein receptor class A domain containing 1	protein-coding
18.2667-19	chr9	27895221	27895428	+	0.166667	NA	Intergenic	Intergenic	-321458	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
36.5001-2	chr22	21776717	21777095	+	0.166667	NA	intron (NM_002745, intron 6 of 8)	intron (NM_002745, intron 6 of 8)	-41112	NR_130910	29799	Hs.517436	NM_013313	ENSG00000100027	YPEL1	FKSG3	yippee like 1	protein-coding
10.4-7	chr2	7019052	7019181	+	0.166667	NA	intron (NM_001349186, intron 4 of 7)	MER58A|DNA|hAT-Charlie	58764	NR_110252	101929452		NR_110252	ENSG00000223884	LOC101929452	-	uncharacterized LOC101929452	ncRNA
46.8667-2	chr14	61225296	61225836	+	0.166667	NA	Intergenic	Intergenic	55772	NM_001017970	161291	Hs.146180	NM_001017970	ENSG00000182107	TMEM30B	CDC50B	transmembrane protein 30B	protein-coding
21.9667-9	chr5	37646940	37647071	+	0.166667	NA	intron (NM_001345998, intron 10 of 17)	L1MA3|LINE|L1	187817	NM_001278098	2668	Hs.248114	NM_000514	ENSG00000168621	GDNF	ATF|ATF1|ATF2|HFB1-GDNF|HSCR3	glial cell derived neurotrophic factor	protein-coding
18.5667-4	chr14	30783260	30783371	+	0.166667	NA	Intergenic	L1MB7|LINE|L1	-91220	NM_001135058	1690	Hs.21016	NM_004086	ENSG00000100473	COCH	COCH-5B2|COCH5B2|DFNA9|DFNB110	cochlin	protein-coding
47.1334	chr19	40722423	40722964	+	0.166667	NA	intron (NM_025194, intron 1 of 6)	L2c|LINE|L2	5581	NM_025194	80271	Hs.515415	NM_025194	ENSG00000086544	ITPKC	IP3-3KC|IP3KC	inositol-trisphosphate 3-kinase C	protein-coding
26.0333-8	chr5	114384787	114384955	+	0.166667	NA	intron (NM_001278204, intron 2 of 6)	MER117|DNA|hAT-Charlie	22552	NM_001278204	3781	Hs.98280	NM_021614	ENSG00000080709	KCNN2	KCa2.2|SK2|SKCA2|SKCa 2|hSK2	potassium calcium-activated channel subfamily N member 2	protein-coding
16.3-2	chr13	86153314	86153411	+	0.166667	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	-353943	NM_032229	84189	Hs.525105	NM_032229	ENSG00000184564	SLITRK6	DFNMYP	SLIT and NTRK like family member 6	protein-coding
21.1334-2	chr20	35750774	35750940	+	0.166667	NA	Intergenic	Mam_R4|LINE|Dong-R4	-8521	NR_136587	9584	Hs.282901	NM_004902	ENSG00000131051	RBM39	CAPER|CAPERalpha|FSAP59|HCC1|RNPC2	RNA binding motif protein 39	protein-coding
29.7-6	chr11	129579305	129579554	+	0.166667	NA	Intergenic	Intergenic	37840	NR_120582	101929557	Hs.385785	NR_120582	ENSG00000281097	LINC01395	-	long intergenic non-protein coding RNA 1395	ncRNA
14.4-14	chr6	27677123	27677209	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	-16869	NR_038294	100507173	Hs.635987	NR_038292	ENSG00000281706	LINC01012	-	long intergenic non-protein coding RNA 1012	ncRNA
54.7334	chr10	55826480	55826881	+	0.166667	NA	Intergenic	Intergenic	-198738	NM_001354404	65217	Hs.280209	NM_033056	ENSG00000150275	PCDH15	CDHR15|DFNB23|USH1F	protocadherin related 15	protein-coding
53.0333-3	chr15	68524849	68525563	+	0.166667	NA	intron (NM_001324014, intron 1 of 12)	intron (NM_001324014, intron 1 of 12)	6833	NM_001324014	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding
56.9668	chr1	175673064	175673488	+	0.166667	NA	intron (NM_003285, intron 1 of 22)	intron (NM_003285, intron 1 of 22)	70319	NM_001328635	7143	Hs.659864	NM_003285	ENSG00000116147	TNR	TN-R	tenascin R	protein-coding
23.7-12	chr7	61914253	61914466	+	0.166667	NA	Intergenic	ALR/Alpha|Satellite|centr	1389697	NR_003952	643955	Hs.583308	NR_003952	ENSG00000185037	ZNF733P	ZNF733	zinc finger protein 733, pseudogene	pseudo
32.0667-7	chr9	137471270	137471463	+	0.166667	NA	intron (NM_001098537, intron 25 of 34)	AluSg7|SINE|Alu	-12032	NM_001130971	26012	Hs.455336	NM_015537	ENSG00000165802	NSMF	HH9|NELF	NMDA receptor synaptonuclear signaling and neuronal migration factor	protein-coding
35.4999	chr7	21763851	21764480	+	0.166667	NA	intron (NM_001277115, intron 54 of 81)	L1MB1|LINE|L1	181734	NM_018719	55536	Hs.744069	NM_018719	ENSG00000164649	CDCA7L	JPO2|R1|RAM2	cell division cycle associated 7 like	protein-coding
40.5999	chr2	232897625	232898220	+	0.166667	NA	intron (NM_001114090, intron 3 of 12)	intron (NM_001114090, intron 3 of 12)	22090	NR_144372	389084	Hs.657509	NM_206895	ENSG00000182600	SNORC	ASCL830|C2orf82|UNQ830	secondary ossification center associated regulator of chondrocyte maturation	protein-coding
69.1333	chr14	72853268	72854024	+	0.166667	NA	intron (NM_001280542, intron 1 of 10)	AluSx3|SINE|Alu	39003	NM_001280544	8110	Hs.162868	NM_012074	ENSG00000205683	DPF3	BAF45C|CERD4	double PHD fingers 3	protein-coding
49.6334-3	chr8	69200135	69200538	+	0.166667	NA	Intergenic	Intergenic	-96146	NR_039986	100505718	Hs.122386	NR_039986	ENSG00000253658	LINC01592	-	long intergenic non-protein coding RNA 1592	ncRNA
51.5334	chr8	115993503	115994128	+	0.166667	NA	intron (NR_046215, intron 7 of 13)	intron (NR_046215, intron 7 of 13)	-324840	NM_014112	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
23.6-2	chr11	75947163	75947326	+	0.166667	NA	intron (NM_003369, intron 6 of 14)	MLT1E3|LTR|ERVL-MaLR	132034	NM_003369	7405	Hs.202470	NM_003369	ENSG00000198382	UVRAG	DHTX|VPS38|p63	UV radiation resistance associated	protein-coding
42.8	chr15	57137142	57137738	+	0.166667	NA	intron (NM_207038, intron 5 of 19)	intron (NM_207038, intron 5 of 19)	-81990	NM_207040	6938	Hs.511504	NM_003205	ENSG00000140262	TCF12	CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64	transcription factor 12	protein-coding
46.8	chr1	105636618	105637127	+	0.166667	NA	Intergenic	Intergenic	-17937	NR_125955	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
47.5001-2	chr5	95580725	95581166	+	0.166667	NA	intron (NM_198150, intron 3 of 7)	intron (NM_198150, intron 3 of 7)	25844	NM_198150	153642	Hs.585051	NM_198150	ENSG00000164291	ARSK	TSULF	arylsulfatase family member K	protein-coding
30.1334	chr1	95856901	95857259	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	-134988	NR_125991	102723661	Hs.143911	NR_125991	ENSG00000237435	LINC02790	-	long intergenic non-protein coding RNA 2790	ncRNA
23.5-13	chr4	38417617	38417813	+	0.166667	NA	Intergenic	MER3|DNA|hAT-Charlie	50801	NR_149123	105374410		NR_149123	ENSG00000248227	LINC02513	-	long intergenic non-protein coding RNA 2513	ncRNA
42.7667-2	chr16	52631875	52632335	+	0.166667	NA	Intergenic	MER117|DNA|hAT-Charlie	-25130	NR_033920	643714	Hs.662199	NR_033920	ENSG00000249231	CASC16	LINC00918	cancer susceptibility 16	ncRNA
21.7-2	chr1	170772042	170772192	+	0.166667	NA	Intergenic	L2a|LINE|L2	107986	NM_006902	5396	Hs.283416	NM_006902	ENSG00000116132	PRRX1	AGOTC|PHOX1|PMX1|PRX-1|PRX1	paired related homeobox 1	protein-coding
29.3334-2	chr6	54989951	54990233	+	0.166667	NA	Intergenic	Intergenic	-116368	NM_001526	3062	Hs.151624	NM_001526	ENSG00000137252	HCRTR2	OX2R	hypocretin receptor 2	protein-coding
35.8001	chr14	42403431	42403655	+	0.166667	NA	Intergenic	Intergenic	796687	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
31.2334-2	chr6	42569788	42570232	+	0.166667	NA	intron (NM_015255, intron 1 of 46)	intron (NM_015255, intron 1 of 46)	5981	NM_001184801	23304	Hs.529925	NM_015255	ENSG00000024048	UBR2	C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3	ubiquitin protein ligase E3 component n-recognin 2	protein-coding
35.6-2	chr1	90040665	90040952	+	0.166667	NA	Intergenic	Intergenic	45698	NM_181781	284695	Hs.306221	NM_181781	ENSG00000162664	ZNF326	ZAN75|ZIRD|Zfp326|dJ871E2.1	zinc finger protein 326	protein-coding
38.2334-2	chr3	99676702	99677013	+	0.166667	NA	intron (NM_001850, intron 2 of 4)	L1M5|LINE|L1	38263	NM_001850	1295	Hs.654548	NM_001850	ENSG00000144810	COL8A1	C3orf7	collagen type VIII alpha 1 chain	protein-coding
50.3-3	chr8	90644256	90644600	+	0.166667	NA	intron (NM_001008495, intron 1 of 2)	intron (NM_001008495, intron 1 of 2)	1477	NM_001146273	169200	Hs.567759	NM_001008495	ENSG00000180694	TMEM64	-	transmembrane protein 64	protein-coding
57.6667	chr3	134281023	134281534	+	0.166667	NA	Intergenic	Intergenic	-30534	NM_001005861	6259	Hs.654562	NM_002958	ENSG00000163785	RYK	D3S3195|JTK5|JTK5A|RYK1	receptor like tyrosine kinase	protein-coding
24.1667-3	chr11	20064558	20064926	+	0.166667	NA	intron (NM_182964, intron 20 of 37)	intron (NM_182964, intron 20 of 37)	-15439	NR_046672	100874014	Hs.557916	NR_046672	ENSG00000254453	NAV2-AS2	-	NAV2 antisense RNA 2	ncRNA
23.2667-11	chr6	147506861	147507071	+	0.166667	NA	Intergenic	CpG	-1724	NM_001030060	389432	Hs.567973	NM_001030060	ENSG00000203727	SAMD5	dJ875H10.1	sterile alpha motif domain containing 5	protein-coding
37.1-3	chr4	63079155	63079406	+	0.166667	NA	Intergenic	L1M4c|LINE|L1	-917515	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
22.0334-2	chr18	543051	543279	+	0.166667	NA	Intergenic	Intergenic	-27871	NR_136505	105376854		NR_136505	ENSG00000264265	LINC01925	-	long intergenic non-protein coding RNA 1925	ncRNA
22.6	chr10	12584070	12584335	+	0.166667	NA	intron (NM_001351032, intron 4 of 11)	intron (NM_001351032, intron 4 of 11)	5449	NR_039700	100616151		NR_039700	ENSG00000263584	MIR4480	-	microRNA 4480	ncRNA
44.6333	chr11	15045388	15045687	+	0.166667	NA	Intergenic	Intergenic	-28056	NM_000728	797	Hs.534305	NM_000728	ENSG00000175868	CALCB	CALC2|CGRP-II|CGRP2	calcitonin related polypeptide beta	protein-coding
25.7667	chr1	163425992	163426313	+	0.166667	NA	Intergenic	Intergenic	-2961	NR_104294	100422212	Hs.556898	NR_104294		LOC100422212	-	eukaryotic translation initiation factor 3 subunit J pseudogene	pseudo
58.5999	chr12	67062634	67063211	+	0.166667	NA	Intergenic	Intergenic	33362	NR_120490	102724421	Hs.135774	NR_120490	ENSG00000257083	LOC102724421	-	uncharacterized LOC102724421	ncRNA
54.2334	chr20	19391751	19392140	+	0.166667	NA	intron (NM_020689, intron 2 of 16)	intron (NM_020689, intron 2 of 16)	-107349	NR_024564	100130264	Hs.683814	NR_024564	ENSG00000179447	LOC100130264	-	uncharacterized LOC100130264	ncRNA
47.6667-2	chr2	51631839	51632249	+	0.166667	NA	intron (NR_135237, intron 5 of 10)	MER67D|LTR|ERV1	599443	NR_135237	730100	Hs.640140	NR_135237	ENSG00000231918	LOC730100	-	uncharacterized LOC730100	ncRNA
27.9667-7	chr2	198747241	198747504	+	0.166667	NA	Intergenic	Intergenic	-372275	NR_110267	101927619	Hs.632942	NR_110267		LINC01923	-	long intergenic non-protein coding RNA 1923	ncRNA
50.6	chr2	209774522	209775093	+	0.166667	NA	intron (NM_032504, intron 2 of 63)	intron (NM_032504, intron 2 of 63)	2814	NM_032504	285175	Hs.396201	NM_032504	ENSG00000144406	UNC80	C2orf21|UNC-80	unc-80 homolog, NALCN channel complex subunit	protein-coding
39.3001	chr14	50591564	50591869	+	0.166667	NA	intron (NM_015915, intron 4 of 13)	intron (NM_015915, intron 4 of 13)	31691	NM_015915	51062	Hs.584905	NM_015915	ENSG00000198513	ATL1	AD-FSP|FSP1|GBP3|HSN1D|SPG3|SPG3A|atlastin1	atlastin GTPase 1	protein-coding
22.5334	chr12	121037365	121037549	+	0.166667	NA	intron (NM_198213, intron 1 of 4)	MIR3|SINE|MIR	1785	NM_198213	8638	Hs.118633	NM_003733	ENSG00000135114	OASL	OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL	2'-5'-oligoadenylate synthetase like	protein-coding
39.2666-2	chr12	2080827	2081102	+	0.166667	NA	intron (NM_199460, intron 1 of 49).2	L1MEd|LINE|L1	27679	NM_199460	775	Hs.118262	NM_000719	ENSG00000151067	CACNA1C	CACH2|CACN2|CACNL1A1|CCHL1A1|CaV1.2|LQT8|TS|TS. LQT8	calcium voltage-gated channel subunit alpha1 C	protein-coding
26.2-8	chr2	37463812	37464091	+	0.166667	NA	Intergenic	L1ME2|LINE|L1	119321	NM_012413	25797	Hs.79033	NM_012413	ENSG00000115828	QPCT	GCT|QC|sQC	glutaminyl-peptide cyclotransferase	protein-coding
28.4667-5	chr14	29409291	29409645	+	0.166667	NA	Intergenic	Intergenic	517628	NM_001348390	5587	Hs.508999	NM_002742	ENSG00000184304	PRKD1	CHDED|PKC-MU|PKCM|PKD|PRKCM	protein kinase D1	protein-coding
47.0334-2	chr2	61740362	61740845	+	0.166667	NA	Intergenic	LTR104_Mam|LTR|Gypsy	113457	NM_032180	84140	Hs.440466	NM_032180	ENSG00000170264	FAM161A	RP28	FAM161 centrosomal protein A	protein-coding
22.1667-3	chr20	13878418	13878730	+	0.166667	NA	intron (NM_001363752, intron 9 of 16)	intron (NM_001363752, intron 9 of 16)	93546	NR_147978	79133	Hs.472165	NM_024120	ENSG00000101247	NDUFAF5	C20orf7|MC1DN16|bA526K24.2|dJ842G6.1	NADH:ubiquinone oxidoreductase complex assembly factor 5	protein-coding
21.4-11	chr5	51903620	51903769	+	0.166667	NA	Intergenic	MER50B|LTR|ERV1	-104337	NR_147166	105378960	Hs.639310	NR_147166	ENSG00000248789	LINC02118	-	long intergenic non-protein coding RNA 2118	ncRNA
28.3333-12	chr8	32531167	32531492	+	0.166667	NA	intron (NM_013962, intron 1 of 4)	intron (NM_013962, intron 1 of 4)	-16881	NM_001160005	3084	Hs.453951	NM_004495	ENSG00000157168	NRG1	ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF	neuregulin 1	protein-coding
69.6334	chr1	211242713	211243496	+	0.166667	NA	Intergenic	Intergenic	-16173	NM_001136224	55758	Hs.356399	NM_018254	ENSG00000117625	RCOR3	-	REST corepressor 3	protein-coding
35.2666	chr14	51197865	51198367	+	0.166667	NA	Intergenic	MER5C1|DNA|hAT-Charlie	-42131	NM_030755	81542	Hs.125221	NM_030755	ENSG00000139921	TMX1	PDIA11|TMX|TXNDC|TXNDC1	thioredoxin related transmembrane protein 1	protein-coding
65.6334	chr11	109464360	109465066	+	0.166667	NA	Intergenic	L1MC4a|LINE|L1	42523	NM_207645	399947	Hs.172982	NM_207645	ENSG00000185742	C11orf87	LOH11CR1A|NEURIM1	chromosome 11 open reading frame 87	protein-coding
17.2-2	chr15	85446154	85446339	+	0.166667	NA	intron (NM_007200, intron 1 of 36)	intron (NM_007200, intron 1 of 36)	65643	NM_006738	11214	Hs.459211	NM_006738	ENSG00000170776	AKAP13	AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47	A-kinase anchoring protein 13	protein-coding
14.8-11	chr22	36495377	36495545	+	0.166667	NA	intron (NM_024955, intron 7 of 8)	MIRb|SINE|MIR	11579	NM_001363041	80020	Hs.387601	NM_024955	ENSG00000100350	FOXRED2	ERFAD	FAD dependent oxidoreductase domain containing 2	protein-coding
33.1667-2	chr10	92508810	92509128	+	0.166667	NA	intron (NR_136399, intron 6 of 25)	intron (NR_136399, intron 6 of 25)	-11208	NM_001165946	3416	Hs.500546	NM_004969	ENSG00000119912	IDE	INSULYSIN	insulin degrading enzyme	protein-coding
42.3	chr10	84718424	84718869	+	0.166667	NA	Intergenic	Intergenic	293477	NM_001284242	54462	Hs.461988	NM_018999	ENSG00000107771	CCSER2	FAM190B|Gcap14|KIAA1128|bA486O22.1	coiled-coil serine rich protein 2	protein-coding
36.2	chr1	18286260	18286655	+	0.166667	NA	intron (NM_032880, intron 2 of 9)	intron (NM_032880, intron 2 of 9)	178659	NM_032880	84966	Hs.212511	NM_032880	ENSG00000117154	IGSF21	-	immunoglobin superfamily member 21	protein-coding
26.3667-8	chr4	93603844	93604018	+	0.166667	NA	intron (NM_001286838, intron 12 of 14)	Tigger1|DNA|TcMar-Tigger	-224822	NM_005172	474	Hs.532680	NM_005172	ENSG00000172238	ATOH1	ATH1|HATH1|MATH-1|bHLHa14	atonal bHLH transcription factor 1	protein-coding
22.4-16	chr4	56591838	56592068	+	0.166667	NA	intron (NM_001256475, intron 6 of 8)	intron (NM_001256475, intron 6 of 8)	61347	NM_001256475	100506564	Hs.573073	NM_001256475	ENSG00000249693	THEGL	-	theg spermatid protein like	protein-coding
18.7334-2	chr22	35281632	35281838	+	0.166667	NA	intron (NM_001003681, intron 5 of 10)	intron (NM_001003681, intron 5 of 10)	-17540	NM_001135729	10043	Hs.474705	NM_005488	ENSG00000100284	TOM1	-	target of myb1 membrane trafficking protein	protein-coding
31.1334	chr5	122126806	122127074	+	0.166667	NA	Intergenic	MER121|DNA|hAT?	-2606	NM_207317	133923	Hs.729673	NM_207317	ENSG00000164185	ZNF474	-	zinc finger protein 474	protein-coding
39.4334-2	chr4	109257487	109257835	+	0.166667	NA	intron (NM_198721, intron 3 of 36)	MIR|SINE|MIR	44997	NM_198721	84570	Hs.658842	NM_032518	ENSG00000188517	COL25A1	AMY|CFEOM5|CLAC|CLAC-P|CLACP	collagen type XXV alpha 1 chain	protein-coding
19.8667	chr1	42777437	42777622	+	0.166667	NA	non-coding (NR_040733, exon 4 of 4)	non-coding (NR_040733, exon 4 of 4)	7366	NR_133055	105378683	Hs.656494	NR_133055		LOC105378683	-	uncharacterized LOC105378683	ncRNA
20.0333-9	chr2	83949854	83950222	+	0.166667	NA	Intergenic	Intergenic	-340644	NR_003663	388965	Hs.664098	NM_001013648		FUNDC2P2	-	FUN14 domain containing 2 pseudogene 2	pseudo
25.4667	chr1	47185880	47186124	+	0.166667	NA	intron (NM_005764, intron 2 of 3)	intron (NM_005764, intron 2 of 3)	4034	NM_005764	10158	Hs.431099	NM_005764	ENSG00000162366	PDZK1IP1	DD96|MAP17|SPAP	PDZK1 interacting protein 1	protein-coding
55.1332	chr6	99332329	99333008	+	0.166667	NA	intron (NM_001346533, intron 3 of 5)	intron (NM_001346533, intron 3 of 5)	17006	NM_032511	84553	Hs.573245	NM_032511	ENSG00000146267	FAXC	C6orf168|dJ273F20	failed axon connections homolog, metaxin like GST domain containing	protein-coding
21.8667	chr1	8149645	8149892	+	0.166667	NA	Intergenic	Intergenic	-58904	NR_125998	102724539	Hs.516816	NR_125998	ENSG00000227634	LINC01714	-	long intergenic non-protein coding RNA 1714	ncRNA
65.1334	chr4	184879443	184880071	+	0.166667	NA	Intergenic	Intergenic	19704	NR_039977	100506229	Hs.378150	NR_039975		LINC01093	-	long intergenic non-protein coding RNA 1093	ncRNA
18.2667-6	chr15	26693157	26693350	+	0.166667	NA	intron (NM_001278631, intron 3 of 9)	MIRc|SINE|MIR	23512	NM_001191320	2562	Hs.302352	NM_000814	ENSG00000166206	GABRB3	ECA5|EIEE43	gamma-aminobutyric acid type A receptor beta3 subunit	protein-coding
24.6-5	chr2	80534815	80534986	+	0.166667	NA	intron (NM_001282599, intron 3 of 11)	L1ME4c|LINE|L1	221521	NM_001282599	1496	Hs.167368	NM_004389	ENSG00000066032	CTNNA2	CAP-R|CAPR|CDCBM9|CT114|CTNR	catenin alpha 2	protein-coding
63.9333	chr3	178164760	178165199	+	0.166667	NA	Intergenic	L1MC2|LINE|L1	-254222	NR_046786	100874330	Hs.201902	NR_046786	ENSG00000223941	LINC01014	KCNMB2-IT1	long intergenic non-protein coding RNA 1014	ncRNA
12.6667-10	chr8	70009267	70009411	+	0.166667	NA	Intergenic	Intergenic	61913	NM_024504	63978	Hs.736037	NM_024504	ENSG00000147596	PRDM14	PFM11	PR/SET domain 14	protein-coding
22.7-9	chr7	107535586	107535756	+	0.166667	NA	intron (NM_181733, intron 5 of 20)	L1PA7|LINE|L1	-28286	NR_073005	11062	Hs.97627	NM_181581	ENSG00000105865	DUS4L	DUS4|PP35	dihydrouridine synthase 4 like	protein-coding
32.8667	chr11	101949473	101949746	+	0.166667	NA	intron (NM_020802, intron 4 of 10)	intron (NM_020802, intron 4 of 10)	-33087	NM_178127	253935	Hs.318370	NM_178127	ENSG00000187151	ANGPTL5	-	angiopoietin like 5	protein-coding
33.8667	chr1	113678351	113678563	+	0.166667	NA	intron (NM_001142782, intron 19 of 20)	intron (NM_001142782, intron 19 of 20)	80698	NM_006608	10745	Hs.655824	NM_006608	ENSG00000116793	PHTF1	PHTF	putative homeodomain transcription factor 1	protein-coding
24.0334-2	chr13	29980805	29981061	+	0.166667	NA	Intergenic	Intergenic	44402	NR_033889	440131	Hs.132371	NM_001010918		LINC00544	-	long intergenic non-protein coding RNA 544	ncRNA
20.9333-16	chr8	76019002	76019413	+	0.166667	NA	Intergenic	Intergenic	-387447	NR_105006	101926978	Hs.615028	NR_105006	ENSG00000254300	LINC01111	-	long intergenic non-protein coding RNA 1111	ncRNA
26.1-16	chr9	70298397	70298618	+	0.166667	NA	intron (NM_015110, intron 9 of 24)	intron (NM_015110, intron 9 of 24)	39529	NM_015110	23137	Hs.534189	NM_015110	ENSG00000198887	SMC5	SMC5L1	structural maintenance of chromosomes 5	protein-coding
34.7334	chr10	78398963	78399392	+	0.166667	NA	Intergenic	Intergenic	131835	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA
55.0667-3	chr3	105632747	105633233	+	0.166667	NA	Intergenic	Intergenic	234601	NM_001321813	868	Hs.430589	NM_170662	ENSG00000114423	CBLB	Cbl-b|Nbla00127|RNF56	Cbl proto-oncogene B	protein-coding
17.9-3	chr14	46233641	46233809	+	0.166667	NA	intron (NR_102702, intron 3 of 3)	intron (NR_102702, intron 3 of 3)	169566	NR_102701	100506412	Hs.207545	NR_102699	ENSG00000258700	LINC00871	-	long intergenic non-protein coding RNA 871	ncRNA
44.1999-2	chr2	121626662	121627080	+	0.166667	NA	intron (NM_015282, intron 1 of 38)	intron (NM_015282, intron 1 of 38)	22591	NM_015282	23332	Hs.469840	NM_015282	ENSG00000074054	CLASP1	MAST1	cytoplasmic linker associated protein 1	protein-coding
40.9333	chr10	78077084	78077507	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	43432	NM_001142285	6229	Hs.280130	NM_001026	ENSG00000138326	RPS24	DBA3|S24|eS24	ribosomal protein S24	protein-coding
15.5-11	chr7	72103758	72103900	+	0.166667	NA	intron (NM_001363460, intron 3 of 5)	intron (NM_001363460, intron 3 of 5)	233562	NM_001017440	83698	Hs.592750	NM_031468	ENSG00000183166	CALN1	CABP8	calneuron 1	protein-coding
17.7667-15	chrX	33998560	33998708	+	0.166667	NA	Intergenic	Intergenic	133696	NM_203408	158724	Hs.143268	NM_203408	ENSG00000185448	FAM47A	-	family with sequence similarity 47 member A	protein-coding
18.8334	chr6	8998320	8998472	+	0.166667	NA	Intergenic	Intergenic	346187	NR_004855	728655	Hs.214343	NR_004855		HULC	HCCAT1|LINC00078|NCRNA00078	hepatocellular carcinoma up-regulated long non-coding RNA	ncRNA
25.4-3	chr11	34426452	34426745	+	0.166667	NA	Intergenic	Intergenic	-12336	NM_001752	847	Hs.502302	NM_001752	ENSG00000121691	CAT	-	catalase	protein-coding
20.9666	chr14	25006507	25006818	+	0.166667	NA	intron (NM_001351940, intron 1 of 6)	Tigger12A|DNA|TcMar-Tigger	42338	NM_001304477	29091	Hs.508958	NM_014178	ENSG00000168952	STXBP6	HSPC156|amisyn	syntaxin binding protein 6	protein-coding
35.2	chr10	49476993	49477249	+	0.166667	NA	intron (NM_001346440, intron 11 of 20)	intron (NM_001346440, intron 11 of 20)	47160	NM_170753	267004	Hs.49063	NM_170753	ENSG00000225830	PGBD3	-	piggyBac transposable element derived 3	protein-coding
21.5667-5	chr18	71567848	71568004	+	0.166667	NA	intron (NR_038326, intron 1 of 4)	intron (NR_038326, intron 1 of 4)	11030	NR_038325	100505776	Hs.202072	NR_038325	ENSG00000260676	LINC01541	UTAT39	long intergenic non-protein coding RNA 1541	ncRNA
51.8334-2	chr12	115805974	115806395	+	0.166667	NA	Intergenic	MER103C|DNA|hAT-Charlie	342470	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA
31.9-3	chr14	51474950	51475236	+	0.166667	NA	intron (NR_051990, intron 2 of 2)	intron (NR_051990, intron 2 of 2)	-14035	NM_001042481	122786	Hs.434914	NM_152330	ENSG00000139926	FRMD6	C14orf31|EX1|Willin|c14_5320	FERM domain containing 6	protein-coding
18.5667-10	chr2	223120327	223120447	+	0.166667	NA	Intergenic	L1MA8|LINE|L1	68457	NM_080671	23704	Hs.348522	NM_080671	ENSG00000152049	KCNE4	MIRP3	potassium voltage-gated channel subfamily E regulatory subunit 4	protein-coding
27.1334-2	chr8	77827430	77827635	+	0.166667	NA	Intergenic	L1MA4A|LINE|L1	376835	NR_125830	102724874	Hs.571511	NR_125830		LOC102724874	-	uncharacterized LOC102724874	ncRNA
26.4-5	chr12	32637659	32637919	+	0.166667	NA	intron (NM_001370297, intron 13 of 14)	THE1D|LTR|ERVL-MaLR	-41411	NM_001278463	10059	Hs.556296	NM_005690	ENSG00000087470	DNM1L	DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5	dynamin 1 like	protein-coding
24.2667-7	chr2	169147163	169147522	+	0.166667	NA	intron (NM_004525, intron 68 of 78)	L2a|LINE|L2	66235	NM_001142271	10170	Hs.179608	NM_005771	ENSG00000073737	DHRS9	3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4	dehydrogenase/reductase 9	protein-coding
56.1333	chr5	43483864	43484257	+	0.166667	NA	promoter-TSS (NM_022483)	promoter-TSS (NM_022483)	-195	NM_022483	64417	Hs.732093	NM_022483	ENSG00000151881	TMEM267	C5orf28	transmembrane protein 267	protein-coding
34.8667-4	chr5	113172210	113172446	+	0.166667	NA	intron (NM_001085377, intron 3 of 18)	intron (NM_001085377, intron 3 of 18)	122610	NM_002387	4163	Hs.593171	NM_002387	ENSG00000171444	MCC	MCC1	MCC regulator of WNT signaling pathway	protein-coding
46.3333-2	chr1	151465530	151466079	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	-6310	NM_145796	23126	Hs.489873	NM_015100	ENSG00000143442	POGZ	MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m	pogo transposable element derived with ZNF domain	protein-coding
40.3667-2	chr20	41291043	41291501	+	0.166667	NA	intron (NM_015035, intron 1 of 3)	intron (NM_015035, intron 1 of 3)	8848	NM_015035	23051	Hs.380133	NM_015035	ENSG00000174306	ZHX3	TIX1	zinc fingers and homeoboxes 3	protein-coding
47.7667	chr1	36260106	36260499	+	0.166667	NA	intron (NM_001321471, intron 3 of 12)	intron (NM_001321471, intron 3 of 12)	35859	NM_001321473	9967	Hs.744057	NM_005119	ENSG00000054118	THRAP3	BCLAF2|TRAP150	thyroid hormone receptor associated protein 3	protein-coding
34.7667-2	chr10	88361745	88362085	+	0.166667	NA	intron (NM_018363, intron 5 of 6)	intron (NM_018363, intron 5 of 6)	221403	NM_001031709	55328	Hs.149849	NM_018363	ENSG00000184719	RNLS	C10orf59|RENALASE	renalase, FAD dependent amine oxidase	protein-coding
58.0334	chr13	37820641	37821030	+	0.166667	NA	intron (NM_003306, intron 1 of 10)	L1PA15|LINE|L1	49590	NM_001135957	7223	Hs.262960	NM_003306	ENSG00000133107	TRPC4	HTRP-4|HTRP4|TRP4	transient receptor potential cation channel subfamily C member 4	protein-coding
63.7334-2	chr4	42125865	42126566	+	0.166667	NA	intron (NM_207406, intron 3 of 5)	intron (NM_207406, intron 3 of 5)	26440	NM_207406	389206	Hs.120591	NM_207406	ENSG00000188848	BEND4	CCDC4	BEN domain containing 4	protein-coding
30.0667-6	chr19	28462845	28463418	+	0.166667	NA	intron (NR_110759, intron 6 of 9)	Charlie4a|DNA|hAT-Charlie	-143557	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA
17.7-2	chr11	70321081	70321248	+	0.166667	NA	intron (NR_045286, intron 2 of 28)	MLT1A0|LTR|ERVL-MaLR	37209	NR_031624	100313770		NR_031624	ENSG00000221333	MIR548K	MIRN548K	microRNA 548k	ncRNA
18.9-12	chr4	158239112	158239325	+	0.166667	NA	intron (NM_018342, intron 9 of 12)	intron (NM_018342, intron 9 of 12)	28732	NM_018342	55314	Hs.176227	NM_018342	ENSG00000164124	TMEM144	-	transmembrane protein 144	protein-coding
36.5001	chr2	219248507	219248747	+	0.166667	NA	3' UTR (NM_001330213, exon 8 of 8)	3' UTR (NM_001330213, exon 8 of 8)	2731	NM_001330214	8576	Hs.153003	NM_003691	ENSG00000115661	STK16	KRCT|MPSK|PKL12|PSK|TSF1|hPSK	serine/threonine kinase 16	protein-coding
33.0334-2	chr16	18806166	18806536	+	0.166667	NA	3' UTR (NM_015092, exon 63 of 63)	3' UTR (NM_015092, exon 63 of 63)	-4802	NM_015161	23204	Hs.634882	NM_015161	ENSG00000170540	ARL6IP1	AIP1|ARL6IP|ARMER|SPG61	ADP ribosylation factor like GTPase 6 interacting protein 1	protein-coding
53.7	chr6	169193231	169193796	+	0.166667	NA	Intergenic	Intergenic	-10773	NR_125863	101929504	Hs.147721	NR_125863	ENSG00000261039	LINC02544	-	long intergenic non-protein coding RNA 2544	ncRNA
26.2333	chr1	60484951	60485279	+	0.166667	NA	Intergenic	Intergenic	137570	NR_146508	105378763	Hs.551175	NR_146508	ENSG00000226476	LINC01748	-	long intergenic non-protein coding RNA 1748	ncRNA
29.6-2	chr10	118222426	118222766	+	0.166667	NA	Intergenic	MIRc|SINE|MIR	119728	NM_022063	63877	Hs.105575	NM_022063	ENSG00000165669	FAM204A	C10orf84|bA319I23.1	family with sequence similarity 204 member A	protein-coding
27.1667-3	chr17	62064183	62064389	+	0.166667	NA	intron (NM_005121, intron 1 of 29)	intron (NM_005121, intron 1 of 29)	992	NM_005121	9969	Hs.282678	NM_005121	ENSG00000108510	MED13	ARC250|DRIP250|HSPC221|THRAP1|TRAP240	mediator complex subunit 13	protein-coding
14.4334	chr8	107754072	107754185	+	0.166667	NA	Intergenic	Intergenic	-256210	NM_001146	284	Hs.369675	NM_001146	ENSG00000154188	ANGPT1	AGP1|AGPT|ANG1	angiopoietin 1	protein-coding
33.7334	chr1	233710092	233710384	+	0.166667	NA	Intergenic	Intergenic	86086	NR_039625	100616390		NR_039625	ENSG00000265744	MIR4427	-	microRNA 4427	ncRNA
19.4-10	chr2	204928511	204928695	+	0.166667	NA	intron (NM_205863, intron 2 of 21)	intron (NM_205863, intron 2 of 21)	383128	NM_205863	117583	Hs.657382	NM_057177	ENSG00000116117	PARD3B	ALS2CR19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding
30.9667-5	chr7	98777120	98777492	+	0.166667	NA	Intergenic	MER70C|LTR|ERVL	92708	NM_001134450	222865	Hs.270753	NM_152913	ENSG00000166448	TMEM130	-	transmembrane protein 130	protein-coding
35.9334	chr6	86721320	86721647	+	0.166667	NA	Intergenic	Intergenic	-216045	NM_000865	3354	Hs.1611	NM_000865	ENSG00000168830	HTR1E	5-HT1E	5-hydroxytryptamine receptor 1E	protein-coding
23.5334-2	chr3	183151056	183151271	+	0.166667	NA	intron (NM_014398, intron 3 of 5)	MIRb|SINE|MIR	11571	NM_014398	27074	Hs.518448	NM_014398	ENSG00000078081	LAMP3	CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403	lysosomal associated membrane protein 3	protein-coding
45.1667-4	chr22	35130876	35131202	+	0.166667	NA	intron (NR_126356, intron 4 of 5)	L2b|LINE|L2	64881	NM_001303508	91464	Hs.567637	NM_001008494	ENSG00000175329	ISX	Pix-1|RAXLX	intestine specific homeobox	protein-coding
28.3667-2	chr19	14754318	14754488	+	0.166667	NA	intron (NM_001271052, intron 12 of 18)	MLT2A1|LTR|ERVL	22524	NM_001271052	30817	Hs.531619	NM_013447	ENSG00000127507	ADGRE2	CD312|CD97|EMR2|VBU	adhesion G protein-coupled receptor E2	protein-coding
26.3-11	chr9	130677974	130678287	+	0.166667	NA	intron (NM_021619, intron 3 of 4)	intron (NM_021619, intron 3 of 4)	13536	NM_021619	59335	Hs.495311	NM_021619	ENSG00000130711	PRDM12	HSAN8|PFM9	PR/SET domain 12	protein-coding
30.6-4	chr14	82706174	82706398	+	0.166667	NA	intron (NR_146650, intron 5 of 5)	intron (NR_146650, intron 5 of 5)	63654	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
42.2667-6	chr6	39393347	39393643	+	0.166667	NA	intron (NM_001289024, intron 2 of 9)	MIR|SINE|MIR	37895	NM_001289024	221458	Hs.588202	NM_145027	ENSG00000164627	KIF6	C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1	kinesin family member 6	protein-coding
23.3333-16	chr7	121408799	121409024	+	0.166667	NA	Intergenic	LTR82A|LTR|ERVL	-12543	NM_001040020	10447	Hs.434053	NM_014888	ENSG00000196937	FAM3C	GS3786|ILEI	family with sequence similarity 3 member C	protein-coding
51.8334	chr12	53511154	53511506	+	0.166667	NA	TTS (NM_001366561)	TTS (NM_001366561)	-2654	NR_046221	100652999	Hs.633602	NR_046221	ENSG00000257550	LOC100652999	-	uncharacterized LOC100652999	ncRNA
31.2667-5	chr2	152101936	152102249	+	0.166667	NA	Intergenic	MER1A|DNA|hAT-Charlie	-2925	NM_000726	785	Hs.120725	NM_000726	ENSG00000182389	CACNB4	CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6	calcium voltage-gated channel auxiliary subunit beta 4	protein-coding
19.6334	chr5	4384991	4385136	+	0.166667	NA	Intergenic	Intergenic	-388418	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA
25.7667-2	chr11	40124763	40124959	+	0.166667	NA	intron (NR_047674, intron 1 of 1)	L1MA3|LINE|L1	168269	NR_047674	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
30.6667-5	chr20	21898145	21898428	+	0.166667	NA	Intergenic	Intergenic	-155804	NR_038394	100270679	Hs.385748	NR_038394	ENSG00000234435	LINC01432	-	long intergenic non-protein coding RNA 1432	ncRNA
32.4334	chr10	76385613	76385869	+	0.166667	NA	intron (NM_001305581, intron 6 of 6)	L2c|LINE|L2	-502303	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA
25.0333-10	chr5	51983730	51984031	+	0.166667	NA	Intergenic	Intergenic	-24151	NR_147166	105378960	Hs.639310	NR_147166	ENSG00000248789	LINC02118	-	long intergenic non-protein coding RNA 2118	ncRNA
18.2-10	chr17	57855753	57855902	+	0.166667	NA	Intergenic	Intergenic	-5783	NM_016070	51649	Hs.5836	NM_016070	ENSG00000181610	MRPS23	CGI-138|HSPC329|MRP-S23	mitochondrial ribosomal protein S23	protein-coding
38.3	chr1	116281000	116281434	+	0.166667	NA	Intergenic	L1M1|LINE|L1	-92027	NM_000701	476	Hs.371889	NM_000701	ENSG00000163399	ATP1A1	CMT2DD|HOMGSMR2	ATPase Na+/K+ transporting subunit alpha 1	protein-coding
17.0667-14	chr5	30259680	30259890	+	0.166667	NA	Intergenic	Intergenic	379225	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
37.2667-4	chr3	126315503	126315807	+	0.166667	NA	Intergenic	Intergenic	41753	NM_014079	28999	Hs.272215	NM_014079	ENSG00000163884	KLF15	KKLF	Kruppel like factor 15	protein-coding
19.4334	chr6	50615839	50616042	+	0.166667	NA	Intergenic	L1MDa|LINE|L1	-97604	NM_172238	83741	Hs.434107	NM_172238	ENSG00000008197	TFAP2D	TFAP2BL1	transcription factor AP-2 delta	protein-coding
30.1-8	chr4	92239894	92240312	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	37199	NR_125920	101929194	Hs.626389	NR_125920		LNCPRESS2	-	lncRNA p53 regulated and ESC associated 2	ncRNA
23.9-9	chr5	100150567	100150975	+	0.166667	NA	Intergenic	Intergenic	237483	NR_027503	100133050	Hs.534796	NR_027503		LOC100133050	-	glucuronidase beta pseudogene	pseudo
49.7667-3	chr8	86203666	86204146	+	0.166667	NA	Intergenic	Intergenic	26475	NM_138817	157724	Hs.149095	NM_138817	ENSG00000164893	SLC7A13	AGT-1|AGT1|XAT2	solute carrier family 7 member 13	protein-coding
55.3667-2	chr8	143208324	143208750	+	0.166667	NA	Intergenic	Intergenic	-4681	NM_001301772	338328	Hs.426410	NM_178172	ENSG00000277494	GPIHBP1	GPI-HBP1|HYPL1D	glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	protein-coding
26.4-6	chr15	63405723	63406167	+	0.166667	NA	intron (NR_120375, intron 4 of 6)	intron (NR_120375, intron 4 of 6)	15715	NR_120375	102723344	Hs.569500	NR_120375		LINC02568	-	long intergenic non-protein coding RNA 2568	ncRNA
22.8333-4	chr15	47534220	47534419	+	0.166667	NA	intron (NM_001198999, intron 3 of 19)	AluSz6|SINE|Alu	-183186	NM_001358351	80031	Hs.511265	NM_020858	ENSG00000137872	SEMA6D	-	semaphorin 6D	protein-coding
12.1333-2	chr22	34450913	34451015	+	0.166667	NA	Intergenic	Intergenic	-528076	NM_001362949	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding
32.5333-11	chr8	84704997	84705292	+	0.166667	NA	promoter-TSS (NM_001287244)	promoter-TSS (NM_001287244)	-783	NM_001287244	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
32.3667-6	chr6	43824122	43824427	+	0.166667	NA	Intergenic	Intergenic	28059	NR_149142	285857	Hs.582798	NR_149142	ENSG00000283215	LINC02537	-	long intergenic non-protein coding RNA 2537	ncRNA
54.0334	chr1	81361335	81361746	+	0.166667	NA	intron (NM_001366003, intron 2 of 27)	L2c|LINE|L2	55145	NM_001366008	23266	Hs.24212	NM_012302	ENSG00000117114	ADGRL2	CIRL2|CL2|LEC1|LPHH1|LPHN2	adhesion G protein-coupled receptor L2	protein-coding
31.5333-7	chr5	12907006	12907453	+	0.166667	NA	intron (NR_147005, intron 3 of 4)	THE1D|LTR|ERVL-MaLR	125657	NR_147005	105374658		NR_147005		LINC02220	-	long intergenic non-protein coding RNA 2220	ncRNA
27.8-10	chr4	58623176	58623454	+	0.166667	NA	Intergenic	L1PA12|LINE|L1	-86987	NR_133943	105377671	Hs.225045	NR_133943	ENSG00000250340	LINC02494	-	long intergenic non-protein coding RNA 2494	ncRNA
34-6	chr3	147319679	147320018	+	0.166667	NA	Intergenic	Intergenic	72582	NR_033118	84107	Hs.415766	NM_032153	ENSG00000174963	ZIC4	-	Zic family member 4	protein-coding
22.3667-5	chr2	128890794	128891020	+	0.166667	NA	Intergenic	L1MEg|LINE|L1	26307	NR_110278	101927881	Hs.570247	NR_110278		LOC101927881	-	uncharacterized LOC101927881	ncRNA
26.3667-7	chr21	14706896	14707151	+	0.166667	NA	Intergenic	Intergenic	-63916	NM_001256579	388813	Hs.334177	NM_001256579		LOC388813	-	uncharacterized protein ENSP00000383407-like	protein-coding
35.3-4	chr3	156070047	156070370	+	0.166667	NA	Intergenic	L1ME3G|LINE|L1	-50340	NM_172160	7881	Hs.654519	NM_003471	ENSG00000169282	KCNAB1	AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3	potassium voltage-gated channel subfamily A member regulatory beta subunit 1	protein-coding
27.5667-5	chr6	63530668	63531154	+	0.166667	NA	Intergenic	Intergenic	-41101	NM_003463	7803	Hs.227777	NM_003463	ENSG00000112245	PTP4A1	HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1	protein tyrosine phosphatase 4A1	protein-coding
31.5-12	chr4	130757876	130758137	+	0.166667	NA	Intergenic	ERVL-B4-int|LTR|ERVL	381645	NR_147186	105377420		NR_147186		LINC02479	-	long intergenic non-protein coding RNA 2479	ncRNA
41.1334-2	chr2	162184645	162185041	+	0.166667	NA	intron (NM_004460, intron 20 of 25)	intron (NM_004460, intron 20 of 25)	-32596	NM_002054	2641	Hs.516494	NM_002054	ENSG00000115263	GCG	GLP-1|GLP1|GLP2|GRPP	glucagon	protein-coding
60.4334	chr6	86946409	86946945	+	0.166667	NA	intron (NM_000865, intron 1 of 1)	intron (NM_000865, intron 1 of 1)	9149	NM_000865	3354	Hs.1611	NM_000865	ENSG00000168830	HTR1E	5-HT1E	5-hydroxytryptamine receptor 1E	protein-coding
24.8-7	chr4	173294601	173295013	+	0.166667	NA	intron (NM_017423, intron 3 of 11)	(ATAT)n|Simple_repeat|Simple_repeat	26647	NR_036093	100422849		NR_036093	ENSG00000221296	MIR548T	-	microRNA 548t	ncRNA
23.5333-8	chr3	17173150	17173325	+	0.166667	NA	intron (NM_014744, intron 19 of 21)	MIRb|SINE|MIR	240041	NR_037465	100500913		NR_037465	ENSG00000283885	MIR3714	-	microRNA 3714	ncRNA
49.1	chr20	56012399	56013054	+	0.166667	NA	Intergenic	MamRep137|DNA|TcMar-Tigger	-7207	NM_080617	140689	Hs.126141	NM_080617	ENSG00000054803	CBLN4	CBLNL1	cerebellin 4 precursor	protein-coding
29.2667-5	chr17	69747120	69747450	+	0.166667	NA	intron (NR_109972, intron 3 of 4)	MER3|DNA|hAT-Charlie	153298	NR_109971	101928122	Hs.579342	NR_109971	ENSG00000227517	LINC01483	-	long intergenic non-protein coding RNA 1483	ncRNA
16.4333-3	chr3	88774294	88774491	+	0.166667	NA	Intergenic	L1M1|LINE|L1	-333229	NM_005233	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
28.9667-4	chr3	100390000	100390307	+	0.166667	NA	intron (NM_014820, intron 1 of 11)	intron (NM_014820, intron 1 of 11)	10936	NM_014820	9868	Hs.227253	NM_014820	ENSG00000154174	TOMM70	TOMM70A|Tom70	translocase of outer mitochondrial membrane 70	protein-coding
21.0667-11	chr8	128333388	128333529	+	0.166667	NA	Intergenic	L2c|LINE|L2	183342	NR_031613	100302281		NR_031613	ENSG00000221261	MIR1208	MIRN1208|hsa-mir-1208	microRNA 1208	ncRNA
46.9001-2	chr9	132656846	132657226	+	0.166667	NA	intron (NR_136309, intron 6 of 18)	L1ME4a|LINE|L1	6290	NM_001322343	64794	Hs.660767	NM_022779	ENSG00000125485	DDX31	PPP1R25	DEAD-box helicase 31	protein-coding
48.1333-3	chr17	6597014	6597376	+	0.166667	NA	intron (NR_147088, intron 13 of 17)	MIRb|SINE|MIR	-40640	NM_031220	83394	Hs.183983	NM_031220	ENSG00000091622	PITPNM3	ACKR6|CORD5|NIR1|RDGBA3	PITPNM family member 3	protein-coding
30.3-4	chr22	34718541	34718730	+	0.166667	NA	Intergenic	L1PREC2|LINE|L1	279281	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
43.5333	chr1	151550213	151550827	+	0.166667	NA	intron (NM_001126337, intron 1 of 11)	AluSz|SINE|Alu	4724	NR_030280	693139		NR_030280	ENSG00000207606	MIR554	MIRN554|hsa-mir-554	microRNA 554	ncRNA
47.2-2	chr18	2016832	2017348	+	0.166667	NA	Intergenic	Kanga11a|DNA|TcMar-Tc2	554415	NM_022840	64863	Hs.126888	NM_022840	ENSG00000101574	METTL4	HsT661	methyltransferase like 4	protein-coding
16.2667-11	chr5	113747287	113747468	+	0.166667	NA	Intergenic	MER94|DNA|hAT-Blackjack	233683	NM_022828	64848	Hs.231942	NM_022828	ENSG00000047188	YTHDC2	CAHL|hYTHDC2	YTH domain containing 2	protein-coding
37.4667-2	chr2	60163131	60163542	+	0.166667	NA	Intergenic	Intergenic	219700	NR_132991	106660609	Hs.565545	NR_132991	ENSG00000228590	MIR4432HG	-	MIR4432 host gene	ncRNA
39.5334	chr16	59397225	59397598	+	0.166667	NA	Intergenic	MLT2B3|LTR|ERVL	357780	NR_028471	644649	Hs.250392	NR_028471		APOOP5	-	apolipoprotein O pseudogene 5	pseudo
23.7666	chr14	78184317	78184640	+	0.166667	NA	intron (NR_073547, intron 1 of 20)	intron (NR_073547, intron 1 of 20)	14105	NM_001366426	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
24.7334	chr1	182864478	182864711	+	0.166667	NA	intron (NM_001357, intron 12 of 27)	intron (NM_001357, intron 12 of 27)	-25003	NR_148933	647070	Hs.191518	NR_148933		LOC647070	-	uncharacterized LOC647070	ncRNA
33.6-4	chr18	65477245	65477488	+	0.166667	NA	Intergenic	Intergenic	-272886	NM_033646	1005	Hs.541003	NM_004361	ENSG00000081138	CDH7	CDH7L1	cadherin 7	protein-coding
32.2666-7	chr8	123173651	123174070	+	0.166667	NA	Intergenic	Intergenic	-5187	NM_207006	84985	Hs.379821	NM_032899	ENSG00000147689	FAM83A	BJ-TSA-9	family with sequence similarity 83 member A	protein-coding
26.5-5	chr2	60334218	60334396	+	0.166667	NA	Intergenic	AluJo|SINE|Alu	48729	NR_132991	106660609	Hs.565545	NR_132991	ENSG00000228590	MIR4432HG	-	MIR4432 host gene	ncRNA
32.0666	chr14	48994678	48995225	+	0.166667	NA	Intergenic	Intergenic	591429	NM_001030001	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29|uS14	ribosomal protein S29	protein-coding
37.1001	chr22	20257161	20257549	+	0.166667	NA	intron (NM_023004, intron 1 of 1)	MLT1A|LTR|ERVL-MaLR	-8144	NR_031618	100302118		NR_031618	ENSG00000221039	MIR1286	MIRN1286|hsa-mir-1286|mir-1286	microRNA 1286	ncRNA
57.2001	chr2	21529057	21529458	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	181395	NR_038837	645949	Hs.456782	NR_038837	ENSG00000229621	LINC01822	-	long intergenic non-protein coding RNA 1822	ncRNA
56.2999	chr1	72926775	72927215	+	0.166667	NA	Intergenic	L2a|LINE|L2	-379175	NR_110677	101927295	Hs.436589	NR_110676	ENSG00000233973	LINC01360	-	long intergenic non-protein coding RNA 1360	ncRNA
60.6001	chr11	55048323	55048693	+	0.166667	NA	Intergenic	ALR/Alpha|Satellite|centr	-213647	NM_024114	79097	Hs.195715	NM_024114	ENSG00000150244	TRIM48	RNF101	tripartite motif containing 48	protein-coding
51.0334	chr13	90132481	90132978	+	0.166667	NA	Intergenic	L1M1|LINE|L1	-13012	NR_047489	100874187	Hs.564526	NR_047489	ENSG00000261446	LINC00559	-	long intergenic non-protein coding RNA 559	ncRNA
21.8333-14	chr9	7028473	7028667	+	0.166667	NA	intron (NR_148680, intron 16 of 21)	L1M1|LINE|L1	271220	NM_001304341	23081	Hs.709425	NM_015061	ENSG00000107077	KDM4C	GASC1|JHDM3C|JMJD2C|TDRD14C	lysine demethylase 4C	protein-coding
29.5667-8	chr4	64611306	64611654	+	0.166667	NA	Intergenic	Intergenic	-202020	NM_001363796	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
39.3-7	chr6	16923501	16923793	+	0.166667	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	-162157	NM_001128164	6310	Hs.434961	NM_000332	ENSG00000124788	ATXN1	ATX1|D6S504E|SCA1	ataxin 1	protein-coding
43.6334-2	chr15	62186962	62187414	+	0.166667	NA	Intergenic	Intergenic	16130	NR_148210	107984784	Hs.591131	NR_148210	ENSG00000259697	LOC107984784	-	uncharacterized LOC107984784	ncRNA
40.6667-6	chr3	192346546	192346823	+	0.166667	NA	intron (NM_004113, intron 3 of 5)	intron (NM_004113, intron 3 of 5)	62365	NM_021032	2257	Hs.390250	NM_004113	ENSG00000114279	FGF12	EIEE47|FGF12B|FHF1	fibroblast growth factor 12	protein-coding
28.5-3	chr18	34372491	34372913	+	0.166667	NA	Intergenic	Intergenic	-120588	NM_032975	1837	Hs.643454	NM_001390	ENSG00000134769	DTNA	D18S892E|DRP3|DTN|DTN-A|LVNC1	dystrobrevin alpha	protein-coding
44.7667-2	chr13	107780143	107780578	+	0.166667	NA	intron (NM_001080396, intron 1 of 2)	intron (NM_001080396, intron 1 of 2)	55098	NR_046848	100874375	Hs.653972	NR_046848		FAM155A-IT1	-	FAM155A intronic transcript 1	ncRNA
18.6667-3	chr11	75399177	75399556	+	0.166667	NA	promoter-TSS (NM_001260506)	promoter-TSS (NM_001260506)	-125	NM_001260507	6188	Hs.546286	NM_001005	ENSG00000149273	RPS3	S3	ribosomal protein S3	protein-coding
35.9-3	chr2	7123886	7124503	+	0.166667	NA	Intergenic	Intergenic	-46314	NR_110252	101929452		NR_110252	ENSG00000223884	LOC101929452	-	uncharacterized LOC101929452	ncRNA
47.2666	chr1	50335514	50335855	+	0.166667	NA	Intergenic	Intergenic	87759	NM_032110	63950	Hs.334481	NM_032110	ENSG00000142700	DMRTA2	-	DMRT like family A2	protein-coding
57.1999	chr20	45502187	45502906	+	0.166667	NA	Intergenic	Intergenic	13076	NM_006652	10816	Hs.370724	NM_006652	ENSG00000101446	SPINT3	HKIB9	serine peptidase inhibitor, Kunitz type 3	protein-coding
37-2	chr11	112319783	112320208	+	0.166667	NA	intron (NR_126004, intron 2 of 3)	intron (NR_126004, intron 2 of 3)	49246	NR_126004	283140	Hs.651827	NR_126004	ENSG00000250303	LINC02762	-	long intergenic non-protein coding RNA 2762	ncRNA
58.9001	chr22	35054860	35055260	+	0.166667	NA	Intergenic	L4_A_Mam|LINE|RTE-X	-11098	NM_001303508	91464	Hs.567637	NM_001008494	ENSG00000175329	ISX	Pix-1|RAXLX	intestine specific homeobox	protein-coding
57.3668	chr12	99783022	99783431	+	0.166667	NA	intron (NM_152788, intron 4 of 25)	MER47A|DNA|TcMar-Tigger	135473	NM_153364	196472	Hs.591011	NM_153364	ENSG00000180219	FAM71C	-	family with sequence similarity 71 member C	protein-coding
29.6333-2	chr10	87580826	87581108	+	0.166667	NA	Intergenic	Intergenic	73134	NM_001178118	9562	Hs.121260	NM_004897	ENSG00000107789	MINPP1	HIPER1|MINPP2|MIPP	multiple inositol-polyphosphate phosphatase 1	protein-coding
36.0001	chr2	170798375	170798682	+	0.166667	NA	intron (NM_001289947, intron 4 of 4)	intron (NM_001289947, intron 4 of 4)	14737	NM_001289947	285141	Hs.443729	NM_001289947	ENSG00000204334	ERICH2	-	glutamate rich 2	protein-coding
62.6334	chr5	104822077	104822620	+	0.166667	NA	Intergenic	Intergenic	-277126	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
36.0999-2	chr2	165270173	165270762	+	0.166667	NA	intron (NM_001040143, intron 2 of 27)	intron (NM_001040143, intron 2 of 27)	-23588	NM_021007	6326	Hs.93485	NM_021007	ENSG00000136531	SCN2A	BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2	sodium voltage-gated channel alpha subunit 2	protein-coding
30.6-13	chr8	48293299	48293729	+	0.166667	NA	Intergenic	L1MD1|LINE|L1	-258053	NR_105002	101929268	Hs.683934	NR_105002	ENSG00000253608	LOC101929268	-	uncharacterized LOC101929268	ncRNA
54.7666-4	chr7	43069359	43070068	+	0.166667	NA	Intergenic	L1ME3F|LINE|L1	-42934	NM_001287059	23072	Hs.164453	NM_015052	ENSG00000002746	HECW1	NEDL1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding
30.0333	chr11	64941978	64942323	+	0.166667	NA	intron (NM_001037225, intron 8 of 10)	intron (NM_001037225, intron 8 of 10)	-6257	NM_130769	170589	Hs.436119	NM_130769	ENSG00000149735	GPHA2	A2|GPA2|ZSIG51	glycoprotein hormone subunit alpha 2	protein-coding
44.4-4	chr14	29993974	29994496	+	0.166667	NA	Intergenic	Intergenic	-66388	NM_001330069	5587	Hs.508999	NM_002742	ENSG00000184304	PRKD1	CHDED|PKC-MU|PKCM|PKD|PRKCM	protein kinase D1	protein-coding
44.6-6	chr5	80600738	80601298	+	0.166667	NA	Intergenic	Charlie4z|DNA|hAT-Charlie	21506	NR_125754	103689917	Hs.740035	NR_125754	ENSG00000251221	LINC01337	TCONS_00009713	long intergenic non-protein coding RNA 1337	ncRNA
39.9667-4	chr3	33908116	33908611	+	0.166667	NA	Intergenic	Intergenic	109733	NM_013374	10015	Hs.475896	NM_013374	ENSG00000170248	PDCD6IP	AIP1|ALIX|DRIP4|HP95	programmed cell death 6 interacting protein	protein-coding
32.0333-2	chr1	245003483	245003957	+	0.166667	NA	intron (NM_001290327, intron 2 of 7)	AluJr|SINE|Alu	-32851	NR_111907	101928068	Hs.134857	NR_111907		LOC101928068	-	uncharacterized LOC101928068	ncRNA
37.4-4	chr22	46575538	46575792	+	0.166667	NA	Intergenic	Intergenic	-1423	NM_001366660	23151	Hs.475150	NM_015124	ENSG00000075240	GRAMD4	DIP	GRAM domain containing 4	protein-coding
14.9334	chr10	69608821	69608944	+	0.166667	NA	Intergenic	L1MD1|LINE|L1	-21365	NM_145306	219738	Hs.522992	NM_145306	ENSG00000171224	FAM241B	C10orf35	family with sequence similarity 241 member B	protein-coding
39.8-2	chr12	39859349	39859880	+	0.166667	NA	intron (NM_052885, intron 6 of 9)	AluSq2|SINE|Alu	233431	NM_001031748	283461	Hs.648205	NM_001031748	ENSG00000180116	C12orf40	HEL-206|HEL-S-94	chromosome 12 open reading frame 40	protein-coding
25.7666-3	chr20	41839351	41839575	+	0.166667	NA	Intergenic	MLT2B1|LTR|ERVL	-221086	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding
44.4-9	chr4	153299717	153300183	+	0.166667	NA	intron (NM_001351057, intron 7 of 12)	LTR10A|LTR|ERV1	8861	NR_001562	303	Hs.546235	NR_001562		ANXA2P1	ANX2L1|ANX2P1|LPC2A	annexin A2 pseudogene 1	pseudo
34.0667-10	chrX	89091502	89091775	+	0.166667	NA	Intergenic	L1M4|LINE|L1	344413	NM_001184771	53336	Hs.458292	NM_033048	ENSG00000147183	CPXCR1	CT77	CPX chromosome region candidate 1	protein-coding
39.4334	chr11	22340425	22340760	+	0.166667	NA	intron (NM_020346, intron 1 of 11)	intron (NM_020346, intron 1 of 11)	2211	NM_020346	57084	Hs.242821	NM_020346	ENSG00000091664	SLC17A6	DNPI|VGLUT2	solute carrier family 17 member 6	protein-coding
57.4668	chr3	166916233	166916616	+	0.166667	NA	intron (NR_135545, intron 2 of 2)	L1PA14|LINE|L1	17741	NR_135545	105374194		NR_135545		LOC105374194	inv3q26.1	uncharacterized LOC105374194	ncRNA
40.8666	chr14	56919225	56919814	+	0.166667	NA	intron (NR_029385, intron 3 of 3)	intron (NR_029385, intron 3 of 3)	106361	NR_029385	100309464	Hs.637962	NR_029385	ENSG00000248550	OTX2-AS1	OTX2OS1	OTX2 antisense RNA 1 (head to head)	ncRNA
28.8-3	chr10	90781961	90782261	+	0.166667	NA	intron (NM_019860, intron 1 of 2)	intron (NM_019860, intron 1 of 2)	75928	NM_019860	3363	Hs.73739	NM_000872	ENSG00000148680	HTR7	5-HT7	5-hydroxytryptamine receptor 7	protein-coding
35.6334	chr2	132510047	132510323	+	0.166667	NA	intron (NM_001508, intron 1 of 1)	intron (NM_001508, intron 1 of 1)	76474	NR_162099	113218485		NR_162099		MIR9986	-	microRNA 9986	ncRNA
44.3667-2	chr9	29899190	29899488	+	0.166667	NA	Intergenic	L1MB1|LINE|L1	509115	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
24.5333-14	chr7	4460969	4461215	+	0.166667	NA	Intergenic	L1M5|LINE|L1	-221203	NM_001037165	221937	Hs.487393	NM_001037165	ENSG00000164916	FOXK1	FOXK1L	forkhead box K1	protein-coding
27.2-9	chr2	230208581	230208900	+	0.166667	NA	intron (NM_080424, intron 7 of 18)	intron (NM_080424, intron 7 of 18)	11244	NM_004510	3431	Hs.145150	NM_004509	ENSG00000135899	SP110	IFI41|IFI75|IPR1|VODI	SP110 nuclear body protein	protein-coding
22.6-18	chr6	5266579	5266828	+	0.166667	NA	intron (NM_006567, intron 1 of 6)	intron (NM_006567, intron 1 of 6)	5190	NM_006567	10667	Hs.484547	NM_006567	ENSG00000145982	FARS2	COXPD14|FARS1|HSPC320|PheRS|SPG77|mtPheRS	phenylalanyl-tRNA synthetase 2, mitochondrial	protein-coding
42.9999	chr2	110180185	110180705	+	0.166667	NA	intron (NM_207181, intron 2 of 19)	intron (NM_207181, intron 2 of 19)	24568	NM_001128178	4867	Hs.280388	NM_000272	ENSG00000144061	NPHP1	JBTS4|NPH1|SLSN1	nephrocystin 1	protein-coding
49.4001	chr3	999498	999982	+	0.166667	NA	Intergenic	L1M4|LINE|L1	-93284	NM_001349361	27255	Hs.387300	NM_014461	ENSG00000134115	CNTN6	NB3	contactin 6	protein-coding
54.7999	chr11	121432164	121432552	+	0.166667	NA	Intergenic	Intergenic	-19956	NM_003105	6653	Hs.368592	NM_003105	ENSG00000137642	SORL1	C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250	sortilin related receptor 1	protein-coding
37.0667-4	chr2	56290291	56290640	+	0.166667	NA	intron (NM_001348516, intron 2 of 2)	intron (NM_001348516, intron 2 of 2)	-104695	NR_125368	100129434	Hs.580330	NR_125368		LOC100129434	-	uncharacterized LOC100129434	ncRNA
48.8667	chr10	82230744	82231072	+	0.166667	NA	intron (NR_120666, intron 2 of 3)	intron (NR_120666, intron 2 of 3)	2012	NR_120666	101929590	Hs.733268	NR_120666	ENSG00000225738	NRG3-AS1	C10orf100|Em:AC010157.1	NRG3 antisense RNA 1	ncRNA
47.1334-2	chr5	124582413	124582782	+	0.166667	NA	Intergenic	Intergenic	-144077	NR_125774	103724389	Hs.582211	NR_125774		LINC01170	-	long intergenic non-protein coding RNA 1170	ncRNA
18.5-2	chr10	50834670	50834805	+	0.166667	NA	intron (NM_001370131, intron 5 of 11)	intron (NM_001370131, intron 5 of 11)	50890	NM_001370131	29974	Hs.282795	NM_014576	ENSG00000148584	A1CF	ACF|ACF64|ACF65|APOBEC1CF|ASP	APOBEC1 complementation factor	protein-coding
35.6-17	chr9	31847127	31847428	+	0.166667	NA	Intergenic	L1ME4a|LINE|L1	-465787	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
29.1-3	chr15	69784854	69785340	+	0.166667	NA	Intergenic	LTR67B|LTR|ERVL	-50137	NR_026764	414926	Hs.569502	NR_026764	ENSG00000245750	LINC00593	C15orf50	long intergenic non-protein coding RNA 593	ncRNA
20.4-7	chr2	127145536	127145713	+	0.166667	NA	Intergenic	Intergenic	-38470	NM_001320633	274	Hs.193163	NM_004305	ENSG00000136717	BIN1	AMPH2|AMPHL|CNM2|SH3P9	bridging integrator 1	protein-coding
28.8-4	chr13	45204331	45204642	+	0.166667	NA	intron (NM_004128, intron 4 of 7)	intron (NM_004128, intron 4 of 7)	-3441	NM_198404	386618	Hs.23406	NM_198404	ENSG00000180332	KCTD4	bA321C24.3	potassium channel tetramerization domain containing 4	protein-coding
19.3-2	chr11	35261701	35261987	+	0.166667	NA	intron (NM_001252652, intron 11 of 11)	intron (NM_001252652, intron 11 of 11)	98894	NR_145794	109623487		NR_145794		SNORD164	-	small nucleolar RNA, C/D box 164	snoRNA
40.8-2	chr12	52330806	52331086	+	0.166667	NA	Intergenic	Intergenic	-9548	NM_002282	3889	Hs.720768	NM_002282	ENSG00000170523	KRT83	EKVP5|HB3|Hb-3|KRTHB3|MNLIX	keratin 83	protein-coding
38.4-2	chr17	55815302	55815648	+	0.166667	NA	intron (NM_001330378, intron 5 of 5)	intron (NM_001330378, intron 5 of 5)	64370	NM_001102402	58488	Hs.285218	NM_021213	ENSG00000141179	PCTP	PC-TP|STARD2	phosphatidylcholine transfer protein	protein-coding
54.9001	chr12	87467381	87467730	+	0.166667	NA	Intergenic	Intergenic	136816	NR_135020	105369879	Hs.552351	NR_135020		LOC105369879	-	uncharacterized LOC105369879	ncRNA
41.8001-2	chr5	100027175	100027480	+	0.166667	NA	Intergenic	Intergenic	360927	NR_027503	100133050	Hs.534796	NR_027503		LOC100133050	-	glucuronidase beta pseudogene	pseudo
28.2667-7	chr5	68313715	68314003	+	0.166667	NA	Intergenic	Intergenic	21282	NM_001242466	5295	Hs.132225	NM_181504	ENSG00000145675	PIK3R1	AGM7|GRB1|IMD36|p85|p85-ALPHA	phosphoinositide-3-kinase regulatory subunit 1	protein-coding
24.3667-2	chr10	120576859	120577051	+	0.166667	NA	intron (NR_134516, intron 4 of 4)	intron (NR_134516, intron 4 of 4)	-20994	NR_103717	404216	Hs.196578	NM_001012711	ENSG00000177234	LINC01561	C10orf85	long intergenic non-protein coding RNA 1561	ncRNA
13.7667-2	chr12	103754447	103754548	+	0.166667	NA	intron (NM_017564, intron 61 of 68)	MIR|SINE|MIR	86737	NM_001031701	51559	Hs.48428	NM_016575	ENSG00000111696	NT5DC3	TU12B1-TY|TU12B1TY	5'-nucleotidase domain containing 3	protein-coding
32.2667-2	chr14	69194072	69194375	+	0.166667	NA	intron (NM_001193363, intron 1 of 8)	AluYf1|SINE|Alu	2457	NR_034165	55218	Hs.533878	NM_018199	ENSG00000081177	EXD2	C14orf114|EXDL2	exonuclease 3'-5' domain containing 2	protein-coding
27.4334	chr17	65358489	65358694	+	0.166667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-98950	NR_131984	105827617		NR_131984	ENSG00000263520	LINC02563	CRAT40	long intergenic non-protein coding RNA 2563	ncRNA
37.9667-6	chr20	47041272	47041583	+	0.166667	NA	intron (NM_172110, intron 5 of 13)	L1ME4b|LINE|L1	-125540	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA
18.7334	chr13	46183129	46183286	+	0.166667	NA	Intergenic	Intergenic	-1030	NM_002298	3936	Hs.381099	NM_002298	ENSG00000136167	LCP1	CP64|HEL-S-37|L-PLASTIN|LC64P|LPL|PLS2	lymphocyte cytosolic protein 1	protein-coding
43.6667	chr12	50163686	50164085	+	0.166667	NA	intron (NM_001331069, intron 1 of 11)	AluJb|SINE|Alu	3484	NM_147190	91012	Hs.270525	NM_147190	ENSG00000139624	CERS5	LASS5|Trh4	ceramide synthase 5	protein-coding
21.3334-2	chr5	119715507	119715650	+	0.166667	NA	Intergenic	L1ME5|LINE|L1	86019	NM_001163991	340069	Hs.713304	NM_182761	ENSG00000164334	FAM170A	ZNFD	family with sequence similarity 170 member A	protein-coding
29.9333-10	chr3	134291348	134291689	+	0.166667	NA	Intergenic	MLT1I|LTR|ERVL-MaLR	-22058	NR_146711	105374119		NR_146711	ENSG00000240006	LINC02004	-	long intergenic non-protein coding RNA 2004	ncRNA
21.7-5	chr2	101926543	101926699	+	0.166667	NA	Intergenic	THE1D|LTR|ERVL-MaLR	-56844	NR_103791	100506328	Hs.516245	NR_103791		LINC01127	-	long intergenic non-protein coding RNA 1127	ncRNA
32.6999-3	chr9	36291274	36291616	+	0.166667	NA	Intergenic	Intergenic	-14389	NM_001190388	10020	Hs.5920	NM_005476	ENSG00000159921	GNE	DMRV|GLCNE|IBM2|NM|Uae1	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	protein-coding
17.2334	chr7	12725491	12725619	+	0.166667	NA	Intergenic	Intergenic	37922	NM_005738	10124	Hs.245540	NM_005738	ENSG00000122644	ARL4A	ARL4	ADP ribosylation factor like GTPase 4A	protein-coding
24.7-10	chr21	29205764	29205948	+	0.166667	NA	intron (NR_027072, intron 1 of 1)	intron (NR_027072, intron 1 of 1)	12362	NR_027072	193629	Hs.720711	NM_138968	ENSG00000215533	LINC00189	C21orf109|NCRNA00189	long intergenic non-protein coding RNA 189	ncRNA
28.5666-4	chr5	95313801	95314127	+	0.166667	NA	Intergenic	Intergenic	-29389	NM_024717	79772	Hs.591248	NM_024717	ENSG00000175471	MCTP1	-	multiple C2 and transmembrane domain containing 1	protein-coding
19.6334-2	chr5	75950052	75950173	+	0.166667	NA	Intergenic	L2a|LINE|L2	-133271	NM_001297716	22987	Hs.646953	NM_014979	ENSG00000122012	SV2C	-	synaptic vesicle glycoprotein 2C	protein-coding
47.5	chr11	82686074	82686516	+	0.166667	NA	Intergenic	L1ME4c|LINE|L1	47569	NM_175885	220382	Hs.448218	NM_175885	ENSG00000182103	FAM181B	-	family with sequence similarity 181 member B	protein-coding
20.7667-9	chr5	50889559	50889973	+	0.166667	NA	Intergenic	Tigger2b_Pri|DNA|TcMar-Tigger	80421	NR_104653	100287592	Hs.519298	NR_104653	ENSG00000251573	LINC02106	-	long intergenic non-protein coding RNA 2106	ncRNA
43.1334	chr8	123275749	123276126	+	0.166667	NA	promoter-TSS (NR_037873)	promoter-TSS (NR_037873)	-396	NR_037873	11244	Hs.521800	NM_007222	ENSG00000165156	ZHX1	-	zinc fingers and homeoboxes 1	protein-coding
38.2-2	chr10	118700057	118700391	+	0.166667	NA	intron (NM_153810, intron 5 of 8)	intron (NM_153810, intron 5 of 8)	54746	NM_153810	143384	Hs.420024	NM_153810	ENSG00000151893	CACUL1	C10orf46|CAC1	CDK2 associated cullin domain 1	protein-coding
31.5334-2	chr2	65764896	65765155	+	0.166667	NA	Intergenic	LTR33|LTR|ERVL	-332426	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding
34.2	chr12	111568355	111568735	+	0.166667	NA	intron (NM_001310121, intron 1 of 25)	intron (NM_001310121, intron 1 of 25)	30770	NM_002973	6311	Hs.76253	NM_002973	ENSG00000204842	ATXN2	ATX2|SCA2|TNRC13	ataxin 2	protein-coding
35.6333-4	chr4	55064369	55064619	+	0.166667	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	61101	NM_002253	3791	Hs.479756	NM_002253	ENSG00000128052	KDR	CD309|FLK1|VEGFR|VEGFR2	kinase insert domain receptor	protein-coding
27.5334-3	chr4	101074038	101074244	+	0.166667	NA	intron (NM_001130691, intron 8 of 12)	intron (NM_001130691, intron 8 of 12)	166731	NR_107033	102465868		NR_107033	ENSG00000273882	MIR8066	hsa-mir-8066	microRNA 8066	ncRNA
39.9-3	chr8	127113082	127113528	+	0.166667	NA	Intergenic	L2b|LINE|L2	-31084	NR_119373	103164619	Hs.571401	NR_119373	ENSG00000254166	PCAT2	CARLO4|CARLo-4|PCA2|TCONS_00015167	prostate cancer associated transcript 2	ncRNA
22.7	chr1	224463357	224463539	+	0.166667	NA	intron (NM_001322302, intron 2 of 6)	AluSp|SINE|Alu	28599	NR_136294	149111	Hs.731723	NM_152495	ENSG00000143786	CNIH3	CNIH-3	cornichon family AMPA receptor auxiliary protein 3	protein-coding
32.1667-7	chr2	226552274	226552562	+	0.166667	NA	Intergenic	Intergenic	106375	NR_049887	100847053		NR_049887	ENSG00000263363	MIR5702	-	microRNA 5702	ncRNA
29.8334	chr10	11797414	11797663	+	0.166667	NA	Intergenic	Intergenic	-25818	NM_153256	254427	Hs.435775	NM_153256	ENSG00000148426	PROSER2	C10orf47	proline and serine rich 2	protein-coding
23.1667-3	chr8	93235318	93235652	+	0.166667	NA	Intergenic	Intergenic	-68635	NR_161372	389676	Hs.386711	NR_161372		C8orf87	-	chromosome 8 open reading frame 87	ncRNA
33.3-4	chr4	48753193	48753514	+	0.166667	NA	intron (NM_015030, intron 1 of 63)	intron (NM_015030, intron 1 of 63)	26946	NM_015030	285527	Hs.595553	NM_015030	ENSG00000075539	FRYL	AF4p12|KIAA0826|MOR2	FRY like transcription coactivator	protein-coding
28.1333-6	chr14	85266655	85266930	+	0.166667	NA	Intergenic	Intergenic	-5140	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
30.5666-3	chr6	145248098	145248524	+	0.166667	NA	Intergenic	Intergenic	438566	NM_001368132	7957	Hs.486696	NM_005670	ENSG00000112425	EPM2A	EPM2|MELF	EPM2A glucan phosphatase, laforin	protein-coding
36.3001	chr3	196083477	196083746	+	0.166667	NA	Intergenic	AluSx|SINE|Alu	-1521	NM_001313965	7037	Hs.529618	NM_003234	ENSG00000072274	TFRC	CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90	transferrin receptor	protein-coding
36.2334-2	chr22	43767052	43767398	+	0.166667	NA	intron (NM_198856, intron 2 of 29)	intron (NM_198856, intron 2 of 29)	45080	NM_022785	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding
13.9667-8	chr8	135089002	135089134	+	0.166667	NA	Intergenic	L2a|LINE|L2	-145063	NR_120396	286094	Hs.440978	NR_026706	ENSG00000254083	LINC01591	-	long intergenic non-protein coding RNA 1591	ncRNA
33.9334-2	chr2	125148189	125148394	+	0.166667	NA	Intergenic	HERV16-int|LTR|ERVL	969694	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
31.9334-3	chr4	83363230	83363588	+	0.166667	NA	Intergenic	LTR67B|LTR|ERVL	-28256	NM_001166498	10855	Hs.44227	NM_006665	ENSG00000173083	HPSE	HPA|HPA1|HPR1|HPSE1|HSE1	heparanase	protein-coding
19.2-3	chr12	106085227	106085430	+	0.166667	NA	intron (NM_014840, intron 3 of 6)	intron (NM_014840, intron 3 of 6)	54705	NM_014840	9891	Hs.524692	NM_014840	ENSG00000074590	NUAK1	ARK5	NUAK family kinase 1	protein-coding
33.8334-3	chr4	35324047	35324425	+	0.166667	NA	Intergenic	Intergenic	919703	NR_146893	116984	Hs.479451	NM_015230	ENSG00000047365	ARAP2	CENTD1|PARX	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	protein-coding
30.5-8	chr2	57280234	57280555	+	0.166667	NA	Intergenic	L1MA4|LINE|L1	-627257	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
6.66667-2	chr1	108140728	108140789	+	0.166667	NA	intron (NM_013386, intron 8 of 9).2	L1MB2|LINE|L1	52077	NM_213651	29957	Hs.656870	NM_013386	ENSG00000085491	SLC25A24	APC1|SCAMC-1|SCAMC1	solute carrier family 25 member 24	protein-coding
40.6666	chr12	54399562	54399871	+	0.166667	NA	exon (NM_002205, exon 27 of 30)	exon (NM_002205, exon 27 of 30)	-8418	NM_001130967	25946	Hs.505653	NM_015481	ENSG00000161642	ZNF385A	HZF|RZF|ZFP385|ZNF385	zinc finger protein 385A	protein-coding
59.7332	chr12	40412052	40412478	+	0.166667	NA	intron (NM_173600, intron 6 of 173)	intron (NM_173600, intron 6 of 173)	18871	NM_173600	283463	Hs.632712	NM_173600		MUC19	MUC-19	mucin 19, oligomeric	protein-coding
34.2667-2	chr1	227252596	227252866	+	0.166667	NA	intron (NM_001366019, intron 2 of 36)	L1MEg|LINE|L1	65761	NM_014826	8476	Hs.35433	NM_003607	ENSG00000143776	CDC42BPA	MRCK|MRCKA|PK428	CDC42 binding protein kinase alpha	protein-coding
33.5-6	chr9	18664841	18665184	+	0.166667	NA	intron (NM_052866, intron 9 of 12)	intron (NM_052866, intron 9 of 12)	91706	NR_036107	100422869		NR_036107	ENSG00000264638	MIR3152	-	microRNA 3152	ncRNA
21.9-2	chr1	62938004	62938139	+	0.166667	NA	Intergenic	Intergenic	72854	NR_146607	105378769	Hs.435002	NR_146605	ENSG00000229537	LINC01739	-	long intergenic non-protein coding RNA 1739	ncRNA
41.0334	chr10	71363064	71363350	+	0.166667	NA	non-coding (NR_033413, exon 5 of 5)	non-coding (NR_033413, exon 5 of 5)	-33713	NM_001171931	64072	Hs.656032	NM_022124	ENSG00000107736	CDH23	CDHR23|PITA5|USH1D	cadherin related 23	protein-coding
41.2666	chr10	74425307	74425698	+	0.166667	NA	intron (NM_001369124, intron 6 of 9)	MER63A|DNA|hAT-Blackjack	103822	NR_120673	102723439		NR_120673		LOC102723439	-	uncharacterized LOC102723439	ncRNA
26.8666-3	chr12	93458715	93459260	+	0.166667	NA	Intergenic	AluJb|SINE|Alu	-8527	NR_038161	28977	Hs.199579	NM_014050	ENSG00000198015	MRPL42	HSPC204|L31MT|L42MT|MRP-L31|MRP-L42|MRP-S32|MRPL31|MRPS32|PTD007|RPML31|S32MT	mitochondrial ribosomal protein L42	protein-coding
31.6667	chr1	52393281	52393686	+	0.166667	NA	exon (NM_001190819, exon 6 of 17)	exon (NM_001190819, exon 6 of 17)	10940	NM_004153	4998	Hs.17908	NM_004153	ENSG00000085840	ORC1	HSORC1|ORC1L|PARC1	origin recognition complex subunit 1	protein-coding
35.8667-5	chr6	41903762	41904196	+	0.166667	NA	Intergenic	AluY|SINE|Alu	-8604	NM_018561	25862	Hs.593575	NM_018561	ENSG00000164663	USP49	-	ubiquitin specific peptidase 49	protein-coding
39.7334-3	chr3	115001460	115002070	+	0.166667	NA	intron (NM_015642, intron 1 of 9)	L1MC2|LINE|L1	69649	NM_001164343	26137	Hs.202577	NM_015642	ENSG00000181722	ZBTB20	DPZF|HOF|ODA-8S|PRIMS|ZNF288	zinc finger and BTB domain containing 20	protein-coding
15.9667-3	chr10	66442493	66442681	+	0.166667	NA	intron (NM_001127384, intron 11 of 17)	intron (NM_001127384, intron 11 of 17)	-483449	NM_178011	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding
31.7-4	chr6	41726883	41727348	+	0.166667	NA	intron (NM_001167827, intron 1 of 8)	intron (NM_001167827, intron 1 of 8)	6495	NR_162107	113218489		NR_162107		MIR10398	-	microRNA 10398	ncRNA
25.1333-4	chr10	77721011	77721188	+	0.166667	NA	Intergenic	L1MEg|LINE|L1	-83291	NM_001271518	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding
29.7334-2	chr14	79822755	79823150	+	0.166667	NA	intron (NM_138970, intron 5 of 5)	intron (NM_138970, intron 5 of 5)	-388467	NR_038355	100628307	Hs.623865	NR_038355	ENSG00000258766	DIO2-AS1	-	DIO2 antisense RNA 1	ncRNA
22.0667-7	chr5	134030242	134030427	+	0.166667	NA	Intergenic	AluSp|SINE|Alu	-25359	NM_003374	7416	Hs.519320	NM_003374	ENSG00000213585	VDAC1	PORIN|VDAC-1	voltage dependent anion channel 1	protein-coding
25.4333	chr12	70694961	70695427	+	0.166667	NA	intron (NM_130846, intron 4 of 9)	intron (NM_130846, intron 4 of 9)	-57765	NM_001109754	5787	Hs.201030	NM_002837	ENSG00000127329	PTPRB	HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP	protein tyrosine phosphatase receptor type B	protein-coding
24.3-14	chr5	74447813	74447974	+	0.166667	NA	intron (NR_126354, intron 2 of 2)	intron (NR_126354, intron 2 of 2)	89083	NR_126354	104310351	Hs.582291	NR_126354	ENSG00000248673	LINC01331	-	long intergenic non-protein coding RNA 1331	ncRNA
24.7333-13	chr8	81180304	81180630	+	0.166667	NA	Intergenic	Intergenic	-68399	NM_018440	55824	Hs.266175	NM_018440	ENSG00000076641	PAG1	CBP|PAG	phosphoprotein membrane anchor with glycosphingolipid microdomains 1	protein-coding
29.9-7	chr9	30305359	30305679	+	0.166667	NA	Intergenic	ERVL-B4-int|LTR|ERVL	102935	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
35.0334-3	chr22	43429067	43429505	+	0.166667	NA	intron (NM_001362786, intron 2 of 6)	intron (NM_001362786, intron 2 of 6)	12734	NM_001362786	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding
45.7667	chr12	29563369	29563719	+	0.166667	NA	intron (NM_001367875, intron 11 of 19)	MER20B|DNA|hAT-Charlie	-63851	NM_001353179	341350	Hs.674588	NM_183378	ENSG00000187950	OVCH1	OVCH	ovochymase 1	protein-coding
21.6-16	chr5	151070165	151070341	+	0.166667	NA	intron (NM_001252390, intron 1 of 17)	intron (NM_001252390, intron 1 of 17)	-5122	NM_001258456	10318	Hs.355141	NM_006058	ENSG00000145901	TNIP1	ABIN-1|NAF1|VAN|nip40-1	TNFAIP3 interacting protein 1	protein-coding
26.5334	chr21	7923582	7923745	+	0.166667	NA	Intergenic	(ATTCCATTCC)n|Simple_repeat|Simple_repeat	-94031	NM_001330065	102723475		NM_001330065	ENSG00000276289	KCNE1B	-	potassium voltage-gated channel subfamily E regulatory subunit 1B	protein-coding
38.5334	chr6	129446005	129446440	+	0.166667	NA	intron (NM_000426, intron 45 of 64)	intron (NM_000426, intron 45 of 64)	263955	NM_033515	93663	Hs.486458	NM_033515	ENSG00000146376	ARHGAP18	MacGAP|SENEX|bA307O14.2	Rho GTPase activating protein 18	protein-coding
21.8-3	chr11	41037096	41037266	+	0.166667	NA	intron (NM_001258419, intron 1 of 6)	intron (NM_001258419, intron 1 of 6)	422455	NM_020929	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
20.9334	chr7	36568569	36568768	+	0.166667	NA	intron (NM_001177507, intron 12 of 19)	intron (NM_001177507, intron 12 of 19)	31452	NR_046764	100874264	Hs.690994	NR_046764	ENSG00000230539	AOAH-IT1	-	AOAH intronic transcript 1	ncRNA
76.2667-2	chr5	42160634	42161547	+	0.166667	NA	intron (NR_104636, intron 1 of 3)	AluSc|SINE|Alu	14255	NR_104635	101926960	Hs.365692	NR_104635		LOC101926960	-	uncharacterized LOC101926960	ncRNA
47.0667	chr1	45015004	45015404	+	0.166667	NA	intron (NR_036510, intron 9 of 9)	L2a|LINE|L2	2950	NM_000374	7389	Hs.78601	NM_000374	ENSG00000126088	UROD	PCT|UPD	uroporphyrinogen decarboxylase	protein-coding
26.1-7	chr2	33438872	33439226	+	0.166667	NA	intron (NM_170672, intron 1 of 18)	intron (NM_170672, intron 1 of 18)	2701	NM_001349975	25780	Hs.143674	NM_015376	ENSG00000152689	RASGRP3	GRP3	RAS guanyl releasing protein 3	protein-coding
28.4333	chr10	47245736	47246011	+	0.166667	NA	Intergenic	Intergenic	-54324	NM_004962	2662	Hs.2171	NM_004962	ENSG00000266524	GDF10	BIP|BMP-3b|BMP3B	growth differentiation factor 10	protein-coding
28.6-4	chr12	3962459	3962794	+	0.166667	NA	Intergenic	Intergenic	-89178	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding
23.8667-10	chr8	131348910	131349249	+	0.166667	NA	Intergenic	Intergenic	-308170	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
17.1-18	chr6	138072282	138072414	+	0.166667	NA	Intergenic	Intergenic	35071	NM_022121	64065	Hs.201446	NM_022121	ENSG00000112378	PERP	KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1	p53 apoptosis effector related to PMP22	protein-coding
26.6334-2	chr13	29564383	29564629	+	0.166667	NA	intron (NM_003045, intron 1 of 12)	intron (NM_003045, intron 1 of 12)	31182	NM_003045	6541	Hs.14846	NM_003045	ENSG00000139514	SLC7A1	ATRC1|CAT-1|ERR|HCAT1|REC1L	solute carrier family 7 member 1	protein-coding
21.5667-2	chr10	5483629	5483847	+	0.166667	NA	Intergenic	Intergenic	15832	NM_017422	51806	Hs.180142	NM_017422	ENSG00000178372	CALML5	CLSP	calmodulin like 5	protein-coding
26.5667	chr1	202782466	202782686	+	0.166667	NA	intron (NM_001314042, intron 1 of 27)	intron (NM_001314042, intron 1 of 27)	26894	NM_001347591	10765	Hs.18891	NM_006618	ENSG00000117139	KDM5B	CT31|JARID1B|MRT65|PLU-1|PLU1|PPP1R98|PUT1|RBBP2H1A|RBP2-H1	lysine demethylase 5B	protein-coding
27.7666-2	chr1	35470774	35470996	+	0.166667	NA	exon (NM_024874, exon 6 of 21)	exon (NM_024874, exon 6 of 21)	86518	NM_024874	79932	Hs.456507	NM_024874	ENSG00000142687	KIAA0319L	AAVR|AAVRL	KIAA0319 like	protein-coding
31.0667-5	chr16	62134476	62134738	+	0.166667	NA	Intergenic	MSTB-int|LTR|ERVL-MaLR	-98169	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
73.2001	chr22	28950625	28951193	+	0.166667	NA	intron (NM_032173, intron 1 of 8)	intron (NM_032173, intron 1 of 8)	33520	NM_032173	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding
26.3666-2	chr13	99897244	99897561	+	0.166667	NA	intron (NR_104592, intron 8 of 9)	intron (NR_104592, intron 8 of 9)	59763	NR_120421	101927437	Hs.619936	NR_120421		LOC101927437	-	uncharacterized LOC101927437	ncRNA
32.2333-3	chr14	78805359	78805666	+	0.166667	NA	intron (NR_073547, intron 9 of 20)	intron (NR_073547, intron 9 of 20)	-394470	NR_135159	105370586		NR_135159	ENSG00000258419	LOC105370586	-	uncharacterized LOC105370586	ncRNA
44.1333	chr12	21384208	21384901	+	0.166667	NA	intron (NM_134431, intron 1 of 15)	intron (NM_134431, intron 1 of 15)	10883	NM_134431	6579	Hs.46440	NM_005075	ENSG00000084453	SLCO1A2	OATP|OATP-A|OATP1A2|SLC21A3	solute carrier organic anion transporter family member 1A2	protein-coding
53.8667-2	chr15	58824325	58824869	+	0.166667	NA	intron (NM_001040450, intron 5 of 8)	intron (NM_001040450, intron 5 of 8)	53295	NM_001040450	54629	Hs.591122	NM_019092	ENSG00000128923	MINDY2	FAM63B	MINDY lysine 48 deubiquitinase 2	protein-coding
33.1666-3	chr4	72556462	72556839	+	0.166667	NA	intron (NM_014243, intron 2 of 21)	MIRc|SINE|MIR	12571	NM_014243	9508	Hs.590919	NM_014243	ENSG00000156140	ADAMTS3	ADAMTS-4|HKLLS3	ADAM metallopeptidase with thrombospondin type 1 motif 3	protein-coding
16.5334	chr2	21080691	21080825	+	0.166667	NA	Intergenic	MLT1A-int|LTR|ERVL-MaLR	-36685	NM_000384	338	Hs.120759	NM_000384	ENSG00000084674	APOB	FLDB|LDLCQ4|apoB-100|apoB-48	apolipoprotein B	protein-coding
32.8666-6	chr5	26168138	26168371	+	0.166667	NA	Intergenic	Intergenic	870332	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
26.2001	chr10	56481380	56481537	+	0.166667	NA	Intergenic	L1MB8|LINE|L1	-120185	NM_032997	11130	Hs.591363	NM_007057	ENSG00000122952	ZWINT	HZwint-1|KNTC2AP|SIP30|ZWINT1	ZW10 interacting kinetochore protein	protein-coding
44.2667-4	chr7	41537764	41538363	+	0.166667	NA	Intergenic	Intergenic	-155856	NR_027118	285954	Hs.656869	NR_027118	ENSG00000224116	INHBA-AS1	-	INHBA antisense RNA 1	ncRNA
26.7334	chr11	111619641	111619833	+	0.166667	NA	intron (NM_015191, intron 2 of 14)	intron (NM_015191, intron 2 of 14)	17288	NM_015191	23235	Hs.269128	NM_015191	ENSG00000170145	SIK2	LOH11CR1I|QIK|SIK-2|SNF1LK2	salt inducible kinase 2	protein-coding
35.0334	chr1	201149643	201149990	+	0.166667	NA	intron (NM_016456, intron 3 of 5)	intron (NM_016456, intron 3 of 5)	4658	NM_001288565	252839	Hs.181444	NM_016456	ENSG00000116857	TMEM9	DERM4|TMEM9A	transmembrane protein 9	protein-coding
58.6334	chr6	119407406	119407936	+	0.166667	NA	Intergenic	MER21B|LTR|ERVL	-57910	NM_005907	4121	Hs.102788	NM_005907	ENSG00000111885	MAN1A1	HUMM3|HUMM9|MAN9	mannosidase alpha class 1A member 1	protein-coding
28.7667-2	chr2	17477428	17477842	+	0.166667	NA	Intergenic	LTR16E2|LTR|ERVL	40805	NM_001099218	729475	Hs.515802	NM_001099218	ENSG00000214842	RAD51AP2	-	RAD51 associated protein 2	protein-coding
24.9667-12	chr6	65396488	65396672	+	0.166667	NA	intron (NM_198283, intron 6 of 9)	L2|LINE|L2	95162	NM_001271675	441155	Hs.546686	NM_001271675		LOC441155	-	zinc finger CCCH-type domain-containing-like	protein-coding
27.4-19	chr8	100171959	100172193	+	0.166667	NA	intron (NM_003114, intron 3 of 18)	intron (NM_003114, intron 3 of 18)	13741	NM_003114	6674	Hs.591866	NM_003114	ENSG00000104450	SPAG1	CILD28|CT140|HEL-S-268|HSD-3.8|SP75|TPIS	sperm associated antigen 1	protein-coding
39.7667-2	chr1	63899584	63899963	+	0.166667	NA	intron (NM_005012, intron 1 of 8)	intron (NM_005012, intron 1 of 8)	125756	NM_005012	4919	Hs.128753	NM_005012	ENSG00000185483	ROR1	NTRKR1|dJ537F10.1	receptor tyrosine kinase like orphan receptor 1	protein-coding
35.7333-8	chr5	40076904	40077274	+	0.166667	NA	Intergenic	L2b|LINE|L2	24798	NR_104633	102467077	Hs.148993	NR_104633		LINC00603	-	long intergenic non-protein coding RNA 603	ncRNA
35.9-4	chr2	57823100	57823398	+	0.166667	NA	Intergenic	L1MC1|LINE|L1	-84402	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
19.5-5	chr12	17425546	17425712	+	0.166667	NA	Intergenic	AluY|SINE|Alu	163449	NR_146522	105369678		NR_146522		LINC02378	-	long intergenic non-protein coding RNA 2378	ncRNA
17.5667-3	chr17	26786316	26786455	+	0.166667	NA	Intergenic	Intergenic	302856	NR_135673	105371703	Hs.649918	NR_135673		LOC105371703	-	uncharacterized LOC105371703	ncRNA
29.9-4	chr2	202336834	202337218	+	0.166667	NA	Intergenic	Intergenic	-39301	NM_001204	659	Hs.471119	NM_001204	ENSG00000204217	BMPR2	BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK	bone morphogenetic protein receptor type 2	protein-coding
26.9-10	chr2	56738932	56739226	+	0.166667	NA	Intergenic	Intergenic	-553309	NR_125368	100129434	Hs.580330	NR_125368		LOC100129434	-	uncharacterized LOC100129434	ncRNA
17.9-11	chr5	157058842	157059210	+	0.166667	NA	promoter-TSS (NM_001308156)	promoter-TSS (NM_001308156)	90	NM_001173393	26762	Hs.129711	NM_012206	ENSG00000113249	HAVCR1	CD365|HAVCR|HAVCR-1|KIM-1|KIM1|TIM|TIM-1|TIM1|TIMD-1|TIMD1	hepatitis A virus cellular receptor 1	protein-coding
32.0334-2	chr21	38147330	38147619	+	0.166667	NA	intron (NR_026839, intron 2 of 2)	intron (NR_026839, intron 2 of 2)	26023	NR_026838	84677	Hs.733345	NM_032589	ENSG00000198054	DSCR8	C21orf65|CT25.1a|CT25.1b|MMA-1|MMA-1a|MMA-1b|MMA1|MTAG2	Down syndrome critical region 8	ncRNA
27.7667-2	chr3	2595258	2595618	+	0.166667	NA	intron (NM_175607, intron 4 of 24)	LTR105_Mam|LTR|ERVL	-296777	NM_175613	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
23.1-19	chr8	129076827	129077030	+	0.166667	NA	Intergenic	MIR|SINE|MIR	-110927	NR_145483	106144608		NR_145483	ENSG00000229140	LINC00976	-	long intergenic non-protein coding RNA 976	ncRNA
35.2001	chr8	99173639	99173963	+	0.166667	NA	intron (NM_017890, intron 16 of 61)	MIR3|SINE|MIR	160535	NM_015243	157680	Hs.191540	NM_015243	ENSG00000132549	VPS13B	CHS1|COH1	vacuolar protein sorting 13 homolog B	protein-coding
45.3-3	chr3	50474417	50474962	+	0.166667	NA	intron (NM_001291101, intron 2 of 37)	intron (NM_001291101, intron 2 of 37)	28945	NM_001174051	9254	Hs.476273	NM_006030	ENSG00000007402	CACNA2D2	CACNA2D	calcium voltage-gated channel auxiliary subunit alpha2delta 2	protein-coding
26.6334	chr1	80511373	80511623	+	0.166667	NA	Intergenic	MLT1F2|LTR|ERVL-MaLR	-24257	NR_125941	101927412	Hs.171273	NR_125940	ENSG00000234184	LINC01781	-	long intergenic non-protein coding RNA 1781	ncRNA
49.3334	chr10	53727235	53727614	+	0.166667	NA	Intergenic	Intergenic	-758806	NR_134503	105378311	Hs.623892	NR_134503	ENSG00000234173	LOC105378311	-	uncharacterized LOC105378311	ncRNA
41.9334-4	chr3	103171254	103171702	+	0.166667	NA	Intergenic	MSTD|LTR|ERVL-MaLR	352638	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
65.0666	chr5	86602009	86602544	+	0.166667	NA	Intergenic	L1MA4A|LINE|L1	-15665	NM_001867	1350	Hs.430075	NM_001867	ENSG00000127184	COX7C	-	cytochrome c oxidase subunit 7C	protein-coding
39.2667-6	chr6	66039493	66039799	+	0.166667	NA	Intergenic	L1M1|LINE|L1	251767	NR_026540	442229	Hs.390414	NR_026540		SLC25A51P1	MCART3P|bA707M13.1	SLC25A51 pseudogene 1	pseudo
21.7	chr1	62305837	62305974	+	0.166667	NA	intron (NM_181712, intron 1 of 9)	MIRb|SINE|MIR	13529	NM_181712	163782	Hs.283398	NM_181712	ENSG00000132854	KANK4	ANKRD38|dJ1078M7.1	KN motif and ankyrin repeat domains 4	protein-coding
32.9667-6	chr8	80358239	80358519	+	0.166667	NA	Intergenic	Intergenic	116990	NR_049894	100847056		NR_049894	ENSG00000265588	MIR5708	-	microRNA 5708	ncRNA
51.7667	chr15	52418401	52418967	+	0.166667	NA	intron (NM_001142495, intron 4 of 39)	intron (NM_001142495, intron 4 of 39)	110196	NM_001142495	4644	Hs.21213	NM_000259	ENSG00000197535	MYO5A	GS1|MYH12|MYO5|MYR12	myosin VA	protein-coding
33.8334	chr14	50685563	50685859	+	0.166667	NA	Intergenic	L1M1|LINE|L1	-17405	NM_021818	60485	Hs.642842	NM_021818	ENSG00000151748	SAV1	SAV|WW45|WWP4	salvador family WW domain containing protein 1	protein-coding
20.0667-2	chr1	244019613	244019828	+	0.166667	NA	intron (NR_033883, intron 6 of 11)	intron (NR_033883, intron 6 of 11)	-29219	NM_001278196	10472	Hs.69997	NM_006352	ENSG00000179456	ZBTB18	C2H2-171|MRD22|RP58|TAZ-1|ZNF238	zinc finger and BTB domain containing 18	protein-coding
18.1334	chr6	119619800	119619941	+	0.166667	NA	intron (NR_134600, intron 2 of 3)	intron (NR_134600, intron 2 of 3)	70062	NR_134600	105377975	Hs.671597	NR_134600		LOC105377975	-	uncharacterized LOC105377975	ncRNA
21.7667-6	chr2	74066096	74066500	+	0.166667	NA	intron (NM_001287491, intron 4 of 11)	intron (NM_001287491, intron 4 of 11)	63606	NM_001366022	200424	Hs.208546	NM_001287491	ENSG00000187605	TET3	hCG_40738	tet methylcytosine dioxygenase 3	protein-coding
17.0667-13	chr3	67927080	67927335	+	0.166667	NA	intron (NR_109992, intron 6 of 6)	intron (NR_109992, intron 6 of 6)	-64385	NM_001252216	407738	Hs.655061	NM_213609	ENSG00000183662	TAFA1	FAM19A1|TAFA-1	TAFA chemokine like family member 1	protein-coding
24.2-7	chr5	1716994	1717223	+	0.166667	NA	Intergenic	LTR10E|LTR|ERV1	-8240	NR_036240	100422966		NR_036240	ENSG00000263746	MIR4277	-	microRNA 4277	ncRNA
16.7667-14	chrX	66079640	66079751	+	0.166667	NA	Intergenic	Intergenic	-39570	NM_001184830	11326	Hs.8904	NM_007268	ENSG00000155659	VSIG4	CRIg|Z39IG	V-set and immunoglobulin domain containing 4	protein-coding
46.8001	chr15	83320219	83320671	+	0.166667	NA	Intergenic	Intergenic	-35781	NM_001717	646	Hs.459153	NM_001717	ENSG00000169594	BNC1	BNC|BSN1|HsT19447	basonuclin 1	protein-coding
33.7334-4	chr4	153345899	153346168	+	0.166667	NA	intron (NM_032117, intron 1 of 7)	intron (NM_032117, intron 1 of 7)	1345	NM_032117	84057	Hs.294088	NM_032117	ENSG00000121211	MND1	GAJ	meiotic nuclear divisions 1	protein-coding
40.4-4	chr4	64574056	64574552	+	0.166667	NA	Intergenic	L1ME2|LINE|L1	-164844	NM_001363796	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
54.5	chr10	130416990	130417357	+	0.166667	NA	Intergenic	Intergenic	280764	NM_001321980	10539	Hs.42644	NM_006541	ENSG00000108010	GLRX3	GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3	glutaredoxin 3	protein-coding
63.3-3	chr2	235745000	235745630	+	0.166667	NA	intron (NM_001037131, intron 5 of 17)	intron (NM_001037131, intron 5 of 17)	-227394	NR_146582	27321		NR_146582		TNRC17	CAGL234	trinucleotide repeat containing 17	ncRNA
44.6334-2	chr6	140112738	140113073	+	0.166667	NA	Intergenic	L1M5|LINE|L1	-92347	NR_037441	100500879		NR_037441	ENSG00000263514	MIR3668	-	microRNA 3668	ncRNA
15.4-18	chr5	124418848	124419007	+	0.166667	NA	intron (NR_125774, intron 3 of 5)	intron (NR_125774, intron 3 of 5)	19593	NR_125774	103724389	Hs.582211	NR_125774		LINC01170	-	long intergenic non-protein coding RNA 1170	ncRNA
27.1667-7	chr5	117719225	117719492	+	0.166667	NA	Intergenic	Intergenic	-11003	NR_104997	102467224	Hs.134230	NR_104997		LINC02147	-	long intergenic non-protein coding RNA 2147	ncRNA
27.8667-9	chr3	183561876	183562095	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	-6279	NM_130446	89857	Hs.659147	NM_130446	ENSG00000172578	KLHL6	-	kelch like family member 6	protein-coding
35.6667-2	chr19	29751742	29752180	+	0.166667	NA	Intergenic	AluJb|SINE|Alu	-36172	NM_001256047	83636	Hs.529094	NM_031448	ENSG00000131943	C19orf12	MPAN|NBIA3|NBIA4|SPG43	chromosome 19 open reading frame 12	protein-coding
16.1334	chr6	147173720	147173818	+	0.166667	NA	intron (NR_034115, intron 2 of 10)	intron (NR_034115, intron 2 of 10)	14844	NR_132442	106182249	Hs.575390	NR_132442	ENSG00000196634	LUADT1	-	lung adenocarcinoma associated transcript 1	ncRNA
27.7	chr1	189154117	189154305	+	0.166667	NA	Intergenic	Intergenic	1321799	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
27.6-17	chr8	78555226	78555493	+	0.166667	NA	intron (NR_125389, intron 2 of 2)	intron (NR_125389, intron 2 of 2)	3144	NR_125389	101927003	Hs.614849	NR_125389	ENSG00000254266	PKIA-AS1	-	PKIA antisense RNA 1	ncRNA
16.6667-3	chr11	12372999	12373326	+	0.166667	NA	Intergenic	L1ME3A|LINE|L1	-4409	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding
47.2667-2	chr2	74217983	74218528	+	0.166667	NA	TTS (NM_006636)	TTS (NM_006636)	19640	NM_006636	10797	Hs.469030	NM_006636	ENSG00000065911	MTHFD2	NMDMC	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase	protein-coding
25.7334	chr9	132903355	132903580	+	0.166667	NA	intron (NM_000368, intron 17 of 22)	intron (NM_000368, intron 17 of 22)	24569	NM_018956	11092	Hs.62595	NM_018956	ENSG00000165698	SPACA9	C9orf9|Mast	sperm acrosome associated 9	protein-coding
47.3667	chr15	76221778	76222184	+	0.166667	NA	intron (NM_000126, intron 11 of 11)	intron (NM_000126, intron 11 of 11)	38171	NR_028510	7302	Hs.684881	NR_002721		TYRO3P	-	TYRO3P protein tyrosine kinase pseudogene	pseudo
16.5667-2	chr17	59505191	59505330	+	0.166667	NA	intron (NR_110813, intron 1 of 2)	ERV3-16A3_I-int|LTR|ERVL	21597	NR_110813	101927728	Hs.569720	NR_110813	ENSG00000265313	LINC01476	-	long intergenic non-protein coding RNA 1476	ncRNA
36.8667-3	chr10	50384091	50384366	+	0.166667	NA	intron (NM_147156, intron 6 of 10)	intron (NM_147156, intron 6 of 10)	-135618	NM_001143974	56624	Hs.512645	NM_019893	ENSG00000188611	ASAH2	BCDase|HNAC1|LCDase|N-CDase|NCDase	N-acylsphingosine amidohydrolase 2	protein-coding
43.5667	chr11	30951420	30951876	+	0.166667	NA	intron (NM_001367979, intron 21 of 38)	L1MEd|LINE|L1	41038	NM_020869	341019	Hs.127405	NM_020869	ENSG00000170959	DCDC1	DCDC5	doublecortin domain containing 1	protein-coding
29.4-14	chr9	71098453	71098717	+	0.166667	NA	intron (NM_001366143, intron 1 of 25)	MIR3|SINE|MIR	23036	NM_001366149	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding
23.5334	chr22	34761251	34761452	+	0.166667	NA	intron (NR_138042, intron 3 of 4)	MLT1H|LTR|ERVL-MaLR	236565	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
23.4667-5	chr2	191205897	191206051	+	0.166667	NA	Intergenic	L1ME4b|LINE|L1	-39430	NM_012223	4430	Hs.439620	NM_012223	ENSG00000128641	MYO1B	MMI-alpha|MMIa|MYH-1c|myr1	myosin IB	protein-coding
35.7666	chr1	96249011	96249318	+	0.166667	NA	Intergenic	Intergenic	124961	NR_110693	101928241	Hs.514137	NR_110693	ENSG00000231987	LINC01787	-	long intergenic non-protein coding RNA 1787	ncRNA
30.4667-4	chr10	63143192	63143467	+	0.166667	NA	intron (NM_001282405, intron 1 of 2)	intron (NM_001282405, intron 1 of 2)	10001	NM_030759	29982	Hs.449628	NM_030759	ENSG00000148572	NRBF2	COPR|COPR1|COPR2|NRBF-2	nuclear receptor binding factor 2	protein-coding
39.3-4	chr3	187289944	187290297	+	0.166667	NA	intron (NM_139125, intron 1 of 10)	L2c|LINE|L2	-1152	NR_135551	101929130		NR_135551	ENSG00000283175	LOC101929130	-	uncharacterized LOC101929130	ncRNA
27.8333-7	chr4	112268994	112269454	+	0.166667	NA	non-coding (NR_136622, exon 10 of 10)	non-coding (NR_136622, exon 10 of 10)	16680	NM_052864	92610	Hs.310640	NM_052864	ENSG00000145365	TIFA	T2BP|T6BP|TIFAA	TRAF interacting protein with forkhead associated domain	protein-coding
40.2667	chr10	84908385	84908715	+	0.166667	NA	Intergenic	Intergenic	290355	NR_120668	101929624	Hs.588831	NR_120667	ENSG00000237267	LINC01519	-	long intergenic non-protein coding RNA 1519	ncRNA
30.0667-5	chr15	97346087	97346560	+	0.166667	NA	Intergenic	AluJo|SINE|Alu	175488	NR_120324	101927286	Hs.611279	NR_120324	ENSG00000259664	LINC02254	-	long intergenic non-protein coding RNA 2254	ncRNA
21.7334	chr8	88321423	88321656	+	0.166667	NA	intron (NM_005941, intron 1 of 9)	intron (NM_005941, intron 1 of 9)	5944	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
25.4334-2	chr4	126287937	126288135	+	0.166667	NA	Intergenic	L1MB7|LINE|L1	780777	NR_031746	100302267		NR_031746	ENSG00000283550	MIR2054	hsa-mir-2054	microRNA 2054	ncRNA
15.0334	chr3	47307429	47307519	+	0.166667	NA	intron (NM_025010, intron 1 of 9)	L1ME3F|LINE|L1	24530	NM_025010	23276	Hs.517946	NM_025010	ENSG00000114648	KLHL18	-	kelch like family member 18	protein-coding
45.9001	chr6	55794188	55794621	+	0.166667	NA	exon (NM_021073, exon 3 of 7)	exon (NM_021073, exon 3 of 7)	81186	NM_001329754	653	Hs.296648	NM_021073	ENSG00000112175	BMP5	-	bone morphogenetic protein 5	protein-coding
29.0667-3	chr8	24834808	24835109	+	0.166667	NA	Intergenic	L1MEi|LINE|L1	-78803	NM_005382	4741	Hs.458657	NM_005382	ENSG00000104722	NEFM	NEF3|NF-M|NFM	neurofilament medium	protein-coding
44.4667-4	chr5	60453448	60453743	+	0.166667	NA	intron (NM_001364599, intron 1 of 16)	intron (NM_001364599, intron 1 of 16)	-34118	NR_024617	25859	Hs.146312	NM_001039499	ENSG00000152931	PART1	NCRNA00206	prostate androgen-regulated transcript 1	ncRNA
18.7	chr14	52285975	52286176	+	0.166667	NA	Intergenic	PRIMA4_LTR|LTR|ERV1	18377	NM_000953	5729	Hs.306831	NM_000953	ENSG00000168229	PTGDR	AS1|ASRT1|DP|DP1|PTGDR1	prostaglandin D2 receptor	protein-coding
25.6333-4	chr14	61187536	61188108	+	0.166667	NA	Intergenic	Intergenic	93516	NM_001017970	161291	Hs.146180	NM_001017970	ENSG00000182107	TMEM30B	CDC50B	transmembrane protein 30B	protein-coding
44.4-8	chr3	125035483	125035838	+	0.166667	NA	intron (NM_020733, intron 1 of 16)	L1ME4a|LINE|L1	20337	NM_020733	57493	Hs.477420	NM_020733	ENSG00000173706	HEG1	HEG|MST112|MSTP112	heart development protein with EGF like domains 1	protein-coding
20.9667-5	chr17	47364580	47364758	+	0.166667	NA	intron (NM_152347, intron 10 of 24)	L2b|LINE|L2	40714	NM_152347	124989	Hs.463303	NM_152347	ENSG00000178852	EFCAB13	C17orf57	EF-hand calcium binding domain 13	protein-coding
29.6-13	chr5	155786563	155786765	+	0.166667	NA	Intergenic	Intergenic	-540093	NM_000337	6444	Hs.387207	NM_000337	ENSG00000170624	SGCD	35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD	sarcoglycan delta	protein-coding
62.7334-2	chr4	66079611	66080129	+	0.166667	NA	Intergenic	L1MA9|LINE|L1	-196954	NR_031673	100302177		NR_031673	ENSG00000221563	MIR1269A	MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a	microRNA 1269a	ncRNA
33.4667-4	chr22	36073463	36073802	+	0.166667	NA	Intergenic	L1MB5|LINE|L1	-44808	NM_001082578	23543	Hs.282998	NM_014309	ENSG00000100320	RBFOX2	FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh	RNA binding fox-1 homolog 2	protein-coding
20.3334	chr14	44863905	44864092	+	0.166667	NA	Intergenic	Intergenic	-33277	NM_001017923	122525	Hs.82098	NM_001017923	ENSG00000179476	C14orf28	DRIP-1|DRIP1|c14_5270	chromosome 14 open reading frame 28	protein-coding
57.5667-2	chr8	131029063	131029522	+	0.166667	NA	intron (NM_001115, intron 1 of 17)	MER1A|DNA|hAT-Charlie	11617	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
43.5667-5	chr5	96966087	96966372	+	0.166667	NA	intron (NM_175920, intron 1 of 17)	AluJr|SINE|Alu	7796	NM_175920	4012	Hs.527199	NM_005575	ENSG00000113441	LNPEP	CAP|IRAP|P-LAP|PLAP	leucyl and cystinyl aminopeptidase	protein-coding
32.4667-6	chr8	132777351	132777564	+	0.166667	NA	intron (NM_198513, intron 1 of 7)	intron (NM_198513, intron 1 of 7)	2069	NR_156424	51105	Hs.304362	NM_016018	ENSG00000129292	PHF20L1	CGI-72|TDRD20B|URLC1	PHD finger protein 20 like 1	protein-coding
36.9-3	chr4	6889819	6890207	+	0.166667	NA	Intergenic	Intergenic	-19431	NM_001113361	57533	Hs.518611	NM_020773	ENSG00000132405	TBC1D14	-	TBC1 domain family member 14	protein-coding
29.4667-2	chr1	156784079	156784366	+	0.166667	NA	intron (NM_005973, intron 2 of 6)	AluY|SINE|Alu	16687	NM_005973	5546	Hs.516948	NM_005973	ENSG00000143294	PRCC	RCCP1|TPRC	proline rich mitotic checkpoint control factor	protein-coding
43.8001	chr1	150474723	150475125	+	0.166667	NA	3' UTR (NM_001297673, exon 11 of 11)	3' UTR (NM_001297673, exon 11 of 11)	-12495	NR_073514	80222	Hs.288974	NM_025150	ENSG00000143374	TARS2	COXPD21|TARSL1|thrRS	threonyl-tRNA synthetase 2, mitochondrial	protein-coding
28.9667-9	chr7	15419121	15419577	+	0.166667	NA	intron (NM_001004320, intron 4 of 12)	intron (NM_001004320, intron 4 of 12)	142666	NM_001004320	392636	Hs.670634	NM_001004320	ENSG00000187546	AGMO	TMEM195	alkylglycerol monooxygenase	protein-coding
37.7666	chr18	77907434	77907764	+	0.166667	NA	Intergenic	Intergenic	86128	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA
27.0333-10	chr6	94072637	94072931	+	0.166667	NA	Intergenic	Intergenic	354481	NR_152795	643432	Hs.509936	NR_015362		TSG1	-	tumor suppressor TSG1	ncRNA
30.1-9	chr5	27359909	27360365	+	0.166667	NA	Intergenic	L1MC2|LINE|L1	-112155	NR_038848	643401	Hs.533212	NR_038848	ENSG00000250337	PURPL	LINC01021	p53 upregulated regulator of p53 levels	ncRNA
32.6667	chr11	33530800	33531179	+	0.166667	NA	intron (NM_012194, intron 1 of 20)	intron (NM_012194, intron 1 of 20)	154881	NM_012194	25758	Hs.502266	NM_012194	ENSG00000110427	KIAA1549L	C11orf41|C11orf69|G2	KIAA1549 like	protein-coding
15.1-9	chr4	85328531	85328696	+	0.166667	NA	Intergenic	Intergenic	-146537	NM_001025616	83478	Hs.444229	NM_031305	ENSG00000138639	ARHGAP24	FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP	Rho GTPase activating protein 24	protein-coding
44-2	chr13	86083417	86083888	+	0.166667	NA	Intergenic	L1MB5|LINE|L1	-284233	NM_032229	84189	Hs.525105	NM_032229	ENSG00000184564	SLITRK6	DFNMYP	SLIT and NTRK like family member 6	protein-coding
23.4667-6	chr3	165037238	165037429	+	0.166667	NA	intron (NM_001041, intron 21 of 47)	intron (NM_001041, intron 21 of 47)	41163	NM_001041	6476	Hs.429596	NM_001041	ENSG00000090402	SI	-	sucrase-isomaltase	protein-coding
14.2667-2	chr1	162077462	162077613	+	0.166667	NA	intron (NM_014697, intron 1 of 9)	L1MB7|LINE|L1	7846	NM_001164757	9722	Hs.731942	NM_014697	ENSG00000198929	NOS1AP	6330408P19Rik|CAPON	nitric oxide synthase 1 adaptor protein	protein-coding
37.2667	chr15	95161416	95161815	+	0.166667	NA	Intergenic	Intergenic	165485	NR_034095	400456	Hs.536404	NR_034095	ENSG00000248441	LINC01197	-	long intergenic non-protein coding RNA 1197	ncRNA
37.8667-2	chr15	85733092	85733530	+	0.166667	NA	intron (NM_007200, intron 30 of 36)	HAL1M8|LINE|L1	25414	NR_120366	101929679	Hs.513112	NR_120366		LOC101929679	-	uncharacterized LOC101929679	ncRNA
24.4-18	chr20	49331414	49331635	+	0.166667	NA	Intergenic	AluJb|SINE|Alu	50841	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	small nucleolar RNA, C/D box 12	snoRNA
49.6667-2	chr7	73714358	73714757	+	0.166667	NA	intron (NM_001165903, intron 1 of 9)	AluJo|SINE|Alu	3240	NR_036247	100422948		NR_036247	ENSG00000265724	MIR4284	mir-4284	microRNA 4284	ncRNA
34.8-3	chr11	55707174	55707700	+	0.166667	NA	Intergenic	Intergenic	42270	NM_001004704	219432	Hs.511921	NM_001004704	ENSG00000181903	OR4C6	OR11-138	olfactory receptor family 4 subfamily C member 6	protein-coding
49.6334-2	chr7	12470339	12470758	+	0.166667	NA	Intergenic	LTR104_Mam|LTR|Gypsy	-25881	NR_136261	102725191	Hs.602382	NR_136261	ENSG00000226690	LOC102725191	-	uncharacterized LOC102725191	ncRNA
66.7667	chr19	55640064	55640813	+	0.166667	NA	promoter-TSS (NM_207115)	promoter-TSS (NM_207115)	-564	NM_207115	51157	Hs.631551	NM_016202	ENSG00000213015	ZNF580	-	zinc finger protein 580	protein-coding
34.6667-5	chr17	10110798	10111083	+	0.166667	NA	intron (NM_201433, intron 1 of 13)	L1MA4A|LINE|L1	-74283	NM_201432	8522	Hs.462214	NM_003644	ENSG00000007237	GAS7	-	growth arrest specific 7	protein-coding
14.9334-2	chr7	98155405	98155494	+	0.166667	NA	intron (NM_014916, intron 5 of 13)	L1MD1|LINE|L1	48587	NM_014916	22853	Hs.444179	NM_014916	ENSG00000164715	LMTK2	AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk|hBREK	lemur tyrosine kinase 2	protein-coding
45.1667-3	chr2	214487019	214487416	+	0.166667	NA	intron (NM_001080500, intron 3 of 3)	MLT1B|LTR|ERVL-MaLR	-22965	NR_047698	100885780	Hs.665982	NR_047698	ENSG00000224257	VWC2L-IT1	-	VWC2L intronic transcript 1	ncRNA
23.2-3	chr10	96639846	96640049	+	0.166667	NA	intron (NM_152309, intron 8 of 16)	intron (NM_152309, intron 8 of 16)	-52935	NM_020123	56889	Hs.500674	NM_020123	ENSG00000077147	TM9SF3	EP70-P-iso|SMBP	transmembrane 9 superfamily member 3	protein-coding
58.6332	chr7	9272313	9272739	+	0.166667	NA	Intergenic	Intergenic	-361744	NR_002790	168741	Hs.545134	NR_002790		PER4	-	period circadian regulator 3 pseudogene	pseudo
28.1333-4	chr12	111756285	111756547	+	0.166667	NA	exon (NM_001136538, exon 22 of 22)	exon (NM_001136538, exon 22 of 22)	-10517	NM_000690	217	Hs.604551	NM_000690	ENSG00000111275	ALDH2	ALDH-E2|ALDHI|ALDM	aldehyde dehydrogenase 2 family member	protein-coding
11.9667-3	chr20	14040343	14040414	+	0.166667	NA	intron (NM_001351663, intron 2 of 17)	Tigger3c|DNA|TcMar-Tigger	44862	NM_001351661	140733	Hs.661576	NM_080676	ENSG00000172264	MACROD2	C20orf133|C2orf133	mono-ADP ribosylhydrolase 2	protein-coding
33.5-3	chr16	82045595	82045929	+	0.166667	NA	intron (NM_002153, intron 1 of 4)	L3|LINE|CR1	10509	NM_002153	3294	Hs.162795	NM_002153	ENSG00000086696	HSD17B2	EDH17B2|HSD17|SDR9C2	hydroxysteroid 17-beta dehydrogenase 2	protein-coding
57.3	chr5	135927655	135928236	+	0.166667	NA	Intergenic	L1MEc|LINE|L1	-2352	NR_152420	26223	Hs.591275	NM_012159		FBXL21P	FBL3B|FBXL21|FBXL3B|FBXL3P|Fbl21	F-box and leucine rich repeat protein 21, pseudogene	pseudo
26.9667-2	chr16	6342914	6343134	+	0.166667	NA	intron (NM_018723, intron 2 of 15)	intron (NM_018723, intron 2 of 15)	323321	NM_001308117	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
28.2-14	chr5	157898731	157899054	+	0.166667	NA	Intergenic	AluJo|SINE|Alu	-39747	NM_014666	9685	Hs.644000	NM_014666	ENSG00000113282	CLINT1	CLINT|ENTH|EPN4|EPNR	clathrin interactor 1	protein-coding
32.6334-2	chr18	75230603	75231045	+	0.166667	NA	intron (NM_001308210, intron 1 of 1)	intron (NM_001308210, intron 1 of 1)	19295	NM_001308210	10194	Hs.284217	NM_005786	ENSG00000179981	TSHZ1	CAA|NY-CO-33|SDCCAG33|TSH1	teashirt zinc finger homeobox 1	protein-coding
25.8-11	chr16	58822368	58822649	+	0.166667	NA	Intergenic	L1PA17|LINE|L1	-88192	NM_001286220	2806	Hs.599470	NM_002080	ENSG00000125166	GOT2	KAT4|KATIV|KYAT4|mitAAT	glutamic-oxaloacetic transaminase 2	protein-coding
60.3334	chr14	83155403	83155982	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	513060	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
24.7667-7	chr4	136274288	136274470	+	0.166667	NA	Intergenic	Intergenic	-360699	NR_103763	100507528	Hs.518987	NR_103762	ENSG00000248330	LINC00613	-	long intergenic non-protein coding RNA 613	ncRNA
55.6001-3	chr7	7412815	7413282	+	0.166667	NA	intron (NM_001037763, intron 27 of 34)	intron (NM_001037763, intron 27 of 34)	122825	NM_001037763	340267	Hs.491104	NM_001037763	ENSG00000215018	COL28A1	COL28	collagen type XXVIII alpha 1 chain	protein-coding
36.3999-2	chr14	69383609	69384040	+	0.166667	NA	intron (NM_004450, intron 3 of 3)	intron (NM_004450, intron 3 of 3)	14475	NM_004450	2079	Hs.509791	NM_004450	ENSG00000100632	ERH	DROER	ERH mRNA splicing and mitosis factor	protein-coding
23.5-6	chr15	91998347	91998495	+	0.166667	NA	intron (NR_135775, intron 2 of 10)	AluSx|SINE|Alu	144117	NR_135775	28232	Hs.311187	NM_013272	ENSG00000176463	SLCO3A1	OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11	solute carrier organic anion transporter family member 3A1	protein-coding
32.1667-2	chr10	67650646	67650981	+	0.166667	NA	intron (NM_001291133, intron 1 of 8)	intron (NM_001291133, intron 1 of 8)	14847	NM_001291133	29119	Hs.21375	NM_013266	ENSG00000183230	CTNNA3	ARVD13|VR22	catenin alpha 3	protein-coding
46.2-8	chr9	6496017	6496697	+	0.166667	NA	intron (NM_152896, intron 10 of 15)	intron (NM_152896, intron 10 of 15)	83158	NM_152896	115426	Hs.493401	NM_152896	ENSG00000147854	UHRF2	NIRF|RNF107|TDRD23|URF2	ubiquitin like with PHD and ring finger domains 2	protein-coding
23.8667-2	chr11	36272261	36272604	+	0.166667	NA	3' UTR (NM_014186, exon 6 of 6)	3' UTR (NM_014186, exon 6 of 6)	16992	NM_001101653	29099	Hs.99443	NM_014186	ENSG00000110442	COMMD9	C11orf55|HSPC166|LINC00610	COMM domain containing 9	protein-coding
33.4333-8	chr3	23041994	23042338	+	0.166667	NA	Intergenic	LTR33|LTR|ERVL	160412	NR_136177	100505877	Hs.125904	NR_136176	ENSG00000233153	UBE2E2-AS1	-	UBE2E2 antisense RNA 1 (head to head)	ncRNA
45.3334	chr14	70929395	70930005	+	0.166667	NA	intron (NM_014982, intron 1 of 35)	Kanga2_a|DNA|TcMar-Tc2	22241	NM_014982	22990	Hs.446559	NM_014982	ENSG00000100731	PCNX1	PCNX|PCNXL1|pecanex	pecanex 1	protein-coding
21.9667	chr1	73229859	73230084	+	0.166667	NA	Intergenic	L1MC1|LINE|L1	-76199	NR_110677	101927295	Hs.436589	NR_110676	ENSG00000233973	LINC01360	-	long intergenic non-protein coding RNA 1360	ncRNA
26.4334-2	chr2	36786888	36787192	+	0.166667	NA	intron (NM_001177969, intron 10 of 14)	intron (NM_001177969, intron 10 of 14)	90333	NM_001177971	5212	Hs.137415	NM_053276	ENSG00000205221	VIT	VIT1	vitrin	protein-coding
26.7-2	chr10	104760305	104760628	+	0.166667	NA	intron (NM_014978, intron 1 of 26)	Tigger15a|DNA|TcMar-Tigger	-94250	NR_104028	100505890	Hs.348526	NR_104028	ENSG00000226387	SORCS3-AS1	-	SORCS3 antisense RNA 1	ncRNA
22.5-10	chr8	90287514	90287766	+	0.166667	NA	intron (NR_051989, intron 2 of 3)	intron (NR_051989, intron 2 of 3)	66152	NR_051989	100874052	Hs.571514	NR_051989	ENSG00000253394	LINC00534	-	long intergenic non-protein coding RNA 534	ncRNA
48.7334	chr5	160810975	160811532	+	0.166667	NA	intron (NM_001366652, intron 1 of 24)	L1MA3|LINE|L1	40958	NM_001366654	23120	Hs.109358	NM_025153	ENSG00000118322	ATP10B	ATPVB	ATPase phospholipid transporting 10B (putative)	protein-coding
40.7334-3	chr2	203307146	203307463	+	0.166667	NA	Intergenic	Intergenic	-20935	NM_001282932	10152	Hs.471156	NM_005759	ENSG00000138443	ABI2	ABI-2|ABI2B|AIP-1|AIP1|AblBP3|SSH3BP2|argBP1|argBPIA|argBPIB	abl interactor 2	protein-coding
41.1667	chr15	34231959	34232345	+	0.166667	NA	3' UTR (NM_001042495, exon 26 of 26)	3' UTR (NM_001042495, exon 26 of 26)	7136	NR_147140	51234	Hs.250905	NM_016454	ENSG00000128463	EMC4	PIG17|TMEM85	ER membrane protein complex subunit 4	protein-coding
28.1333-9	chr3	122981041	122981394	+	0.166667	NA	intron (NR_046079, intron 1 of 22)	intron (NR_046079, intron 1 of 22)	-5083	NM_001256347	54437	Hs.210870	NM_018987	ENSG00000082684	SEMA5B	SEMAG|SemG	semaphorin 5B	protein-coding
49.3001	chr14	67364449	67364827	+	0.166667	NA	intron (NM_004094, intron 1 of 7)	intron (NM_004094, intron 1 of 7)	4310	NM_004094	1965	Hs.151777	NM_004094	ENSG00000134001	EIF2S1	EIF-2|EIF-2A|EIF-2alpha|EIF2|EIF2A	eukaryotic translation initiation factor 2 subunit alpha	protein-coding
56.3334	chr12	7723977	7724390	+	0.166667	NA	Intergenic	Intergenic	12750	NM_199286	359787	Hs.131358	NM_199286	ENSG00000187569	DPPA3	Pgc7|STELLA	developmental pluripotency associated 3	protein-coding
57.1667	chr1	80792268	80792818	+	0.166667	NA	Intergenic	Intergenic	151256	NR_125942	101927412	Hs.171273	NR_125940	ENSG00000234184	LINC01781	-	long intergenic non-protein coding RNA 1781	ncRNA
42.2999-2	chr2	132463911	132464440	+	0.166667	NA	intron (NM_001508, intron 1 of 1)	intron (NM_001508, intron 1 of 1)	30464	NR_162099	113218485		NR_162099		MIR9986	-	microRNA 9986	ncRNA
24.8-12	chrX	140138990	140139165	+	0.166667	NA	Intergenic	Intergenic	47410	NM_001271560	389895	Hs.127679	NM_001271560		LOC389895	-	chromosome 16 open reading frame 72-like	protein-coding
47.3666-2	chr17	78608622	78609023	+	0.166667	NA	Intergenic	L1PREC2|LINE|L1	23235	NR_110848	101928710	Hs.464224	NR_110848	ENSG00000267123	SCAT1	LINC02081|XLOC_012582	S-phase cancer associated transcript 1	ncRNA
30-12	chr4	83631732	83631988	+	0.166667	NA	Intergenic	Intergenic	95752	NM_032717	84803	Hs.99196	NM_032717	ENSG00000138678	GPAT3	AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1	glycerol-3-phosphate acyltransferase 3	protein-coding
31.8-2	chr1	234646817	234647089	+	0.166667	NA	intron (NR_125944, intron 1 of 3)	intron (NR_125944, intron 1 of 3)	664	NR_125944	101927787	Hs.520658	NR_125944	ENSG00000228044	LOC101927787	-	uncharacterized LOC101927787	ncRNA
21.6-17	chr6	158493297	158493460	+	0.166667	NA	intron (NM_020245, intron 9 of 13)	intron (NM_020245, intron 9 of 13)	-43058	NM_020823	57583	Hs.99145	NM_020823	ENSG00000146433	TMEM181	GPR178|KIAA1423	transmembrane protein 181	protein-coding
43.3666-4	chr6	134361550	134361865	+	0.166667	NA	Intergenic	Intergenic	-43649	NM_001143676	6446	Hs.510078	NM_005627	ENSG00000118515	SGK1	SGK	serum/glucocorticoid regulated kinase 1	protein-coding
21.4667-5	chr16	72741872	72742110	+	0.166667	NA	Intergenic	Intergenic	-77021	NR_159371	101927957	Hs.637253	NR_126330	ENSG00000261008	LINC01572	-	long intergenic non-protein coding RNA 1572	ncRNA
24.1333-10	chr20	36285749	36286048	+	0.166667	NA	Intergenic	Intergenic	-20441	NM_001365621	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding
28.1-12	chr7	71124100	71124439	+	0.166667	NA	Intergenic	Intergenic	-7875	NM_022479	64409	Hs.488591	NM_022479	ENSG00000185274	GALNT17	GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17	polypeptide N-acetylgalactosaminyltransferase 17	protein-coding
24.5-7	chr15	60601508	60601781	+	0.166667	NA	intron (NR_120342, intron 5 of 5)	intron (NR_120342, intron 5 of 5)	-9118	NM_134262	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding
11.3667-6	chr3	188355317	188355413	+	0.166667	NA	intron (NM_001167671, intron 2 of 10)	intron (NM_001167671, intron 2 of 10)	129960	NM_001167671	4026	Hs.720220	NM_005578	ENSG00000145012	LPP	-	LIM domain containing preferred translocation partner in lipoma	protein-coding
53.9667-2	chr20	23340062	23340629	+	0.166667	NA	Intergenic	Intergenic	-10446	NM_013248	29107	Hs.516933	NM_013248	ENSG00000132661	NXT1	MTR2|P15	nuclear transport factor 2 like export factor 1	protein-coding
45.4334	chr3	166601145	166601620	+	0.166667	NA	Intergenic	Intergenic	-297301	NR_135545	105374194		NR_135545		LOC105374194	inv3q26.1	uncharacterized LOC105374194	ncRNA
21.9667-12	chr8	128386306	128386490	+	0.166667	NA	Intergenic	Intergenic	178281	NR_121673	101927774	Hs.628730	NR_121672		LINC00824	LINC01263	long intergenic non-protein coding RNA 824	ncRNA
36.6	chr1	155993865	155994346	+	0.166667	NA	Intergenic	Intergenic	-14545	NM_001350112	9181	Hs.743352	NM_004723	ENSG00000116584	ARHGEF2	GEF|GEF-H1|GEFH1|LFP40|NEDMHM|P40	Rho/Rac guanine nucleotide exchange factor 2	protein-coding
53.2001	chr3	155701260	155701658	+	0.166667	NA	intron (NM_001349252, intron 2 of 24)	intron (NM_001349252, intron 2 of 24)	2805	NM_014996	23007	Hs.567423	NM_014996	ENSG00000114805	PLCH1	PLCL3	phospholipase C eta 1	protein-coding
26.6667	chr10	108262878	108263317	+	0.166667	NA	Intergenic	MIRc|SINE|MIR	-193804	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
92.1665	chr5	20378429	20379158	+	0.166667	NA	intron (NM_001349558, intron 1 of 15)	intron (NM_001349558, intron 1 of 15)	73242	NR_146519	102725105		NR_146519		CDH18-AS1	-	CDH18 antisense RNA 1	ncRNA
17.8-8	chr12	66570578	66570738	+	0.166667	NA	intron (NM_001366722, intron 2 of 24)	Arthur1B|DNA|hAT-Tip100	108418	NM_001366722	23426	Hs.505946	NM_021150	ENSG00000155974	GRIP1	FRASRS3|GRIP	glutamate receptor interacting protein 1	protein-coding
28.6-7	chr17	27873563	27873960	+	0.166667	NA	Intergenic	Intergenic	19604	NM_001076680	201229	Hs.687951	NM_001076680	ENSG00000232859	LYRM9	C17orf108|HSD24	LYR motif containing 9	protein-coding
46.3-2	chr15	79303872	79304396	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	-6928	NR_125394	23423	Hs.71608	NM_007364	ENSG00000166557	TMED3	C15orf22|P24B|p24g4|p24gamma4|p26	transmembrane p24 trafficking protein 3	protein-coding
33.2334-3	chr20	50425945	50426345	+	0.166667	NA	Intergenic	Intergenic	-84176	NM_001278618	5770	Hs.417549	NM_002827	ENSG00000196396	PTPN1	PTP1B	protein tyrosine phosphatase non-receptor type 1	protein-coding
51.0334-4	chr8	84694676	84695136	+	0.166667	NA	intron (NM_001354308, intron 3 of 9)	MIR|SINE|MIR	-11021	NM_001287244	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
24.9667-3	chr12	122975293	122975663	+	0.166667	NA	intron (NM_001304833, intron 1 of 6)	CpG	275	NM_001304833	79676	Hs.524817	NM_024623	ENSG00000111325	OGFOD2	-	2-oxoglutarate and iron dependent oxygenase domain containing 2	protein-coding
59.9667	chr11	76925163	76925839	+	0.166667	NA	intron (NM_001300953, intron 1 of 9)	HAL1|LINE|L1	64583	NM_001300955	55331	Hs.23862	NM_018367	ENSG00000078124	ACER3	APHC|PHCA|PLDECO	alkaline ceramidase 3	protein-coding
35.2999-2	chr9	75696404	75696754	+	0.166667	NA	Intergenic	Intergenic	-194065	NM_001190482	5125	Hs.368542	NM_006200	ENSG00000099139	PCSK5	PC5|PC6|PC6A|SPC6	proprotein convertase subtilisin/kexin type 5	protein-coding
32.1667-12	chr8	131153174	131153484	+	0.166667	NA	Intergenic	Intergenic	-112420	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
34.5	chr1	159233034	159233465	+	0.166667	NA	Intergenic	AluSx|SINE|Alu	28374	NM_002036	2532	Hs.153381	NM_002036	ENSG00000213088	ACKR1	CCBP1|CD234|DARC|DARC/ACKR1|Dfy|FY|GPD|GpFy|WBCQ1	atypical chemokine receptor 1 (Duffy blood group)	protein-coding
42.0667-6	chr4	53393941	53394286	+	0.166667	NA	intron (NM_001134937, intron 8 of 17)	HAL1|LINE|L1	16460	NM_001134937	81608	Hs.555109	NM_030917	ENSG00000145216	FIP1L1	FIP1|Rhe|hFip1	factor interacting with PAPOLA and CPSF1	protein-coding
22.4-5	chr11	69588704	69588838	+	0.166667	NA	Intergenic	L1ME3G|LINE|L1	-52334	NM_053056	595	Hs.523852	NM_053056	ENSG00000110092	CCND1	BCL1|D11S287E|PRAD1|U21B31	cyclin D1	protein-coding
24.7-17	chr8	58855101	58855259	+	0.166667	NA	intron (NM_014729, intron 3 of 8)	intron (NM_014729, intron 3 of 8)	-195327	NM_003580	8439	Hs.372000	NM_003580	ENSG00000035681	NSMAF	FAN|GRAMD5	neutral sphingomyelinase activation associated factor	protein-coding
27.9-6	chr5	109302945	109303165	+	0.166667	NA	intron (NR_149040, intron 3 of 3)	L2a|LINE|L2	23314	NR_149040	285638	Hs.532104	NR_149040	ENSG00000249476	LOC285638	-	uncharacterized LOC285638	ncRNA
31.8-9	chr3	118454504	118454812	+	0.166667	NA	Intergenic	L1PA11|LINE|L1	-187110	NR_135573	101926968	Hs.518185	NR_135573		LOC101926968	-	uncharacterized LOC101926968	ncRNA
47.5668	chr2	12952023	12952317	+	0.166667	NA	Intergenic	Intergenic	54843	NR_038434	100506474	Hs.242196	NR_038434	ENSG00000225649	LOC100506474	-	uncharacterized LOC100506474	ncRNA
28.9333-12	chr8	19472512	19473059	+	0.166667	NA	intron (NM_001130518, intron 4 of 9)	intron (NM_001130518, intron 4 of 9)	129760	NR_148901	55790	Hs.613729	NM_018371	ENSG00000147408	CSGALNACT1	CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT	chondroitin sulfate N-acetylgalactosaminyltransferase 1	protein-coding
25.9667-5	chr19	327030	327213	+	0.166667	NA	intron (NM_001346105, intron 4 of 12)	intron (NM_001346105, intron 4 of 12)	17720	NM_017550	54531	Hs.101891	NM_017550	ENSG00000105556	MIER2	KIAA1193|Mi-er2	MIER family member 2	protein-coding
62.5334-2	chr8	96615986	96616648	+	0.166667	NA	Intergenic	MER44C|DNA|TcMar-Tigger	-28925	NM_016134	10404	Hs.156178	NM_016134	ENSG00000104324	CPQ	LDP|PGCP	carboxypeptidase Q	protein-coding
26.4333-7	chr17	34825209	34825449	+	0.166667	NA	Intergenic	L2c|LINE|L2	136131	NM_001193529	10693	Hs.73072	NM_006584	ENSG00000132141	CCT6B	CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303	chaperonin containing TCP1 subunit 6B	protein-coding
22.8-6	chr13	43029921	43030124	+	0.166667	NA	intron (NM_013238, intron 1 of 5)	intron (NM_013238, intron 1 of 5)	6436	NM_013238	29103	Hs.438830	NM_013238	ENSG00000120675	DNAJC15	DNAJD1|HSD18|MCJ	DnaJ heat shock protein family (Hsp40) member C15	protein-coding
36.6001	chr15	69268714	69269055	+	0.166667	NA	exon (NM_015554, exon 5 of 5)	exon (NM_015554, exon 5 of 5)	-30028	NM_017705	54852	Hs.591096	NM_017705	ENSG00000137819	PAQR5	MPRG	progestin and adipoQ receptor family member 5	protein-coding
48.3334-2	chr3	21863861	21864381	+	0.166667	NA	Intergenic	Intergenic	-93018	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
30.4-6	chr2	154185439	154185709	+	0.166667	NA	intron (NM_052917, intron 4 of 12)	L1M4c|LINE|L1	241180	NM_001301627	114805	Hs.470277	NM_052917	ENSG00000144278	GALNT13	GalNAc-T13	polypeptide N-acetylgalactosaminyltransferase 13	protein-coding
15.7-5	chr2	57721717	57721869	+	0.166667	NA	Intergenic	Intergenic	-185858	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
47.2667-4	chr5	87334265	87334669	+	0.166667	NA	intron (NM_022650, intron 4 of 24)	MLT2B1|LTR|ERVL	-10839	NR_130929	644285	Hs.709256	NR_130929		LOC644285	-	uncharacterized LOC644285	ncRNA
28.5-9	chr5	9063646	9063876	+	0.166667	NA	intron (NM_003966, intron 17 of 22)	intron (NM_003966, intron 17 of 22)	-9866	NR_039779	100616326		NR_039779	ENSG00000266415	MIR4636	mir-4636	microRNA 4636	ncRNA
23.8-5	chr2	142877021	142877187	+	0.166667	NA	promoter-TSS (NM_003937)	promoter-TSS (NM_003937)	-560	NM_001199241	8942	Hs.470126	NM_003937	ENSG00000115919	KYNU	KYNUU|VCRL2	kynureninase	protein-coding
29.3333-10	chr6	149567725	149568015	+	0.166667	NA	intron (NM_138785, intron 1 of 7)	intron (NM_138785, intron 1 of 7)	1495	NM_138785	116254	Hs.438872	NM_138785	ENSG00000055211	GINM1	C6orf72	glycoprotein integral membrane 1	protein-coding
80.5668	chr10	22576504	22577164	+	0.166667	NA	intron (NM_005028, intron 4 of 9)	AluSz|SINE|Alu	137274	NM_001330062	5305	Hs.57079	NM_005028	ENSG00000150867	PIP4K2A	PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK	phosphatidylinositol-5-phosphate 4-kinase type 2 alpha	protein-coding
29.6334-3	chr2	106304371	106304604	+	0.166667	NA	Intergenic	MER2|DNA|TcMar-Tigger	-65258	NR_157576	402096		NR_157576		LOC402096	-	anaphase promoting complex subunit 1 pseudogene	pseudo
35.4334	chr12	49913568	49913941	+	0.166667	NA	intron (NR_110048, intron 1 of 5)	intron (NR_110048, intron 1 of 5)	1801	NR_110048	101927292	Hs.129345	NR_110048	ENSG00000257771	LINC02395	-	long intergenic non-protein coding RNA 2395	ncRNA
59.1001	chr10	88701733	88702253	+	0.166667	NA	Intergenic	Intergenic	-22551	NM_001080518	643414	Hs.632092	NM_001080518	ENSG00000204021	LIPK	LIPL2|bA186O14.2	lipase family member K	protein-coding
33.1334	chr10	26154579	26154928	+	0.166667	NA	exon (NM_017433, exon 25 of 35)	exon (NM_017433, exon 25 of 35)	-61554	NM_000818	2572	Hs.231829	NM_000818	ENSG00000136750	GAD2	GAD65	glutamate decarboxylase 2	protein-coding
15.7667-3	chr14	67334681	67334777	+	0.166667	NA	3' UTR (NM_022474, exon 15 of 15)	3' UTR (NM_022474, exon 15 of 15)	25075	NM_015994	51382	Hs.272630	NM_015994	ENSG00000100554	ATP6V1D	ATP6M|VATD|VMA8	ATPase H+ transporting V1 subunit D	protein-coding
40.1334	chr12	119596333	119596772	+	0.166667	NA	intron (NM_001136534, intron 1 of 2)	AluSx1|SINE|Alu	2778	NM_001136534	387890	Hs.530965	NM_001136534	ENSG00000224982	TMEM233	DSPB2|IFITMD2	transmembrane protein 233	protein-coding
27.4334-3	chr3	196534273	196534530	+	0.166667	NA	Intergenic	L1MA9|LINE|L1	-19055	NM_001320473	255798	Hs.631933	NM_001077657	ENSG00000214097	SMCO1	C3orf43	single-pass membrane protein with coiled-coil domains 1	protein-coding
17.3-4	chr14	66964813	66965043	+	0.166667	NA	intron (NM_020806, intron 8 of 22)	MIR|SINE|MIR	-224512	NM_173526	161142	Hs.412818	NM_173526	ENSG00000172717	FAM71D	C14orf54	family with sequence similarity 71 member D	protein-coding
44.4001	chr5	5228359	5228668	+	0.166667	NA	intron (NM_139056, intron 11 of 22)	L1MC5a|LINE|L1	88183	NR_136935	170690	Hs.661915	NM_139056	ENSG00000145536	ADAMTS16	ADAMTS16s	ADAM metallopeptidase with thrombospondin type 1 motif 16	protein-coding
22.9667-3	chr10	123174615	123174804	+	0.166667	NA	Intergenic	Intergenic	20307	NM_004725	9184	Hs.418533	NM_004725	ENSG00000154473	BUB3	BUB3L|hBUB3	BUB3 mitotic checkpoint protein	protein-coding
15.9334	chr16	30704862	30705008	+	0.166667	NA	intron (NM_006662, intron 4 of 33)	intron (NM_006662, intron 4 of 33)	-5602	NR_002966	677813	Hs.689718	NR_002966	ENSG00000206755	SNORA30	ACA30|SNORA30A	small nucleolar RNA, H/ACA box 30	snoRNA
51.5	chr1	208157087	208157768	+	0.166667	NA	intron (NM_025179, intron 3 of 31)	intron (NM_025179, intron 3 of 31)	86957	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding
14.0667-3	chr14	99417784	99417900	+	0.166667	NA	intron (NM_199123, intron 6 of 8)	intron (NM_199123, intron 6 of 8)	63017	NM_032233	84193	Hs.510407	NM_032233	ENSG00000183576	SETD3	C14orf154|hSETD3	SET domain containing 3, actin histidine methyltransferase	protein-coding
32.5334	chr19	38377330	38377659	+	0.166667	NA	intron (NM_002812, intron 3 of 6)	intron (NM_002812, intron 3 of 6)	2944	NM_002812	5714	Hs.78466	NM_002812	ENSG00000099341	PSMD8	HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31	proteasome 26S subunit, non-ATPase 8	protein-coding
21.5334	chr8	112387090	112387235	+	0.166667	NA	intron (NM_001363185, intron 32 of 66)	intron (NM_001363185, intron 32 of 66)	-256331	NR_031745	100302225		NR_031745	ENSG00000238399	MIR2053	hsa-mir-2053	microRNA 2053	ncRNA
38.8-2	chr2	40969757	40970015	+	0.166667	NA	Intergenic	L3|LINE|CR1	-457451	NM_001112802	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding
43.0001-2	chr9	80070927	80071397	+	0.166667	NA	Intergenic	Intergenic	96139	NR_121212	101927477	Hs.571630	NR_121212		LINC01507	XLOC_000303	long intergenic non-protein coding RNA 1507	ncRNA
26.2-25	chr8	140450343	140450619	+	0.166667	NA	intron (NM_001160372, intron 2 of 22)	MER33|DNA|hAT-Charlie	7263	NM_001160372	83696	Hs.654911	NM_031466	ENSG00000167632	TRAPPC9	IBP|IKBKBBP|MRT13|NIBP|T1|TRS120	trafficking protein particle complex 9	protein-coding
29.5667-5	chr2	55085583	55085850	+	0.166667	NA	intron (NM_001321904, intron 1 of 9)	intron (NM_001321904, intron 1 of 9)	-34444	NM_001321859	57142	Hs.637850	NM_007008	ENSG00000115310	RTN4	ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C	reticulon 4	protein-coding
54.6666	chr1	174959646	174960042	+	0.166667	NA	intron (NM_001366451, intron 7 of 12)	intron (NM_001366451, intron 7 of 12)	-4934	NM_001243764	9910	Hs.585378	NM_014857	ENSG00000152061	RABGAP1L	HHL|TBC1D18	RAB GTPase activating protein 1 like	protein-coding
41.9333-3	chr20	10415945	10416297	+	0.166667	NA	intron (NM_018848, intron 2 of 5)	intron (NM_018848, intron 2 of 5)	15804	NM_018848	8195	Hs.472119	NM_018848	ENSG00000125863	MKKS	BBS6|HMCS|KMS|MKS	McKusick-Kaufman syndrome	protein-coding
43.5334-2	chr8	132880046	132880386	+	0.166667	NA	intron (NM_003235, intron 5 of 47)	MIRb|SINE|MIR	13258	NM_003235	7038	Hs.654591	NM_003235	ENSG00000042832	TG	AITD3|TGN	thyroglobulin	protein-coding
35.9333-3	chr3	23179565	23179813	+	0.166667	NA	Intergenic	MIR|SINE|MIR	22889	NR_136177	100505877	Hs.125904	NR_136176	ENSG00000233153	UBE2E2-AS1	-	UBE2E2 antisense RNA 1 (head to head)	ncRNA
23.2333-3	chr16	48807664	48807971	+	0.166667	NA	Intergenic	L1MCa|LINE|L1	-197637	NM_153029	9683	Hs.511839	NM_153029	ENSG00000102921	N4BP1	-	NEDD4 binding protein 1	protein-coding
60.5334	chr8	130379867	130380546	+	0.166667	NA	intron (NM_001247996, intron 2 of 30)	LTR16C|LTR|ERVL	63454	NM_001247996	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	protein-coding
20.4667-9	chr5	160501854	160502007	+	0.166667	NA	Intergenic	Intergenic	16578	NR_029701	406938		NR_029701	ENSG00000283733	MIR146A	MIRN146|MIRN146A|miR-146a|miRNA146A	microRNA 146a	ncRNA
26.3667-11	chr8	59674982	59675323	+	0.166667	NA	Intergenic	Intergenic	555942	NR_149031	100505501		NR_149030		LOC100505501	-	uncharacterized LOC100505501	ncRNA
29.8333-8	chr6	158203962	158204233	+	0.166667	NA	Intergenic	Intergenic	35750	NM_207118	404672	Hs.356224	NM_207118	ENSG00000272047	GTF2H5	C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2	general transcription factor IIH subunit 5	protein-coding
33.6334	chrX	152809323	152809678	+	0.166667	NA	Intergenic	L1MB3|LINE|L1	21257	NM_004344	1069	Hs.82794	NM_004344	ENSG00000147400	CETN2	CALT|CEN2	centrin 2	protein-coding
31.2333-3	chr18	76754619	76754924	+	0.166667	NA	Intergenic	Intergenic	64742	NR_122073	400661	Hs.514963	NR_122073	ENSG00000276397	LINC01879	-	long intergenic non-protein coding RNA 1879	ncRNA
20.0666-2	chr16	58447390	58447530	+	0.166667	NA	Intergenic	LTR50|LTR|ERVL	-16185	NM_020465	65009	Hs.322430	NM_020465	ENSG00000103034	NDRG4	BDM1|SMAP-8|SMAP8	NDRG family member 4	protein-coding
50.4001-2	chrX	24044716	24045240	+	0.166667	NA	Intergenic	L1MB7|LINE|L1	-9978	NM_001415	1968	Hs.539684	NM_001415	ENSG00000130741	EIF2S3	EIF2|EIF2G|EIF2gamma|MEHMO|MRXSBRK|eIF-2gA	eukaryotic translation initiation factor 2 subunit gamma	protein-coding
30.1667-4	chr2	212376711	212376976	+	0.166667	NA	intron (NM_001042599, intron 1 of 26)	HSMAR2|DNA|TcMar-Mariner	49517	NR_031643	100313771		NR_031643	ENSG00000221782	MIR548F2	MIR548F-2|MIRN548F2|hsa-mir-548f-2	microRNA 548f-2	ncRNA
32.9334	chr10	75258030	75258297	+	0.166667	NA	Intergenic	L1MEd|LINE|L1	-22206	NM_144589	118881	Hs.355333	NM_144589	ENSG00000165644	COMTD1	-	catechol-O-methyltransferase domain containing 1	protein-coding
45.3334-2	chr18	69848437	69848803	+	0.166667	NA	3' UTR (NM_152721, exon 8 of 8)	3' UTR (NM_152721, exon 8 of 8)	99253	NM_001303618	10666	Hs.660130	NM_006566	ENSG00000150637	CD226	DNAM-1|DNAM1|PTA1|TLiSA1	CD226 molecule	protein-coding
42.4-3	chr2	205113518	205114068	+	0.166667	NA	intron (NM_205863, intron 6 of 21)	intron (NM_205863, intron 6 of 21)	568318	NM_205863	117583	Hs.657382	NM_057177	ENSG00000116117	PARD3B	ALS2CR19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding
21.5-4	chr15	24593708	24593911	+	0.166667	NA	Intergenic	MSTC-int|LTR|ERVL-MaLR	35652	NR_026646	791114	Hs.720900	NR_026646	ENSG00000259905	PWRN1	NCRNA00198	Prader-Willi region non-protein coding RNA 1	ncRNA
49.4334-2	chr6	67234257	67234791	+	0.166667	NA	Intergenic	Intergenic	-820827	NR_125869	102723883	Hs.566528	NR_125869	ENSG00000223504	LOC102723883	-	uncharacterized LOC102723883	ncRNA
29.1334-2	chr10	16045708	16045987	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	-185314	NM_001318330	80013	Hs.158870	NM_024948	ENSG00000148481	MINDY3	C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042	MINDY lysine 48 deubiquitinase 3	protein-coding
20.0667-6	chr2	39721394	39721659	+	0.166667	NA	Intergenic	L2|LINE|L2	55609	NM_152390	130733	Hs.40808	NM_152390	ENSG00000152154	TMEM178A	TMEM178	transmembrane protein 178A	protein-coding
45.8001	chr11	72208044	72208506	+	0.166667	NA	Intergenic	AluSz|SINE|Alu	-8519	NM_001113535	2350	Hs.433159	NM_000803	ENSG00000165457	FOLR2	BETA-HFR|FBP|FBP/PL-1|FR-BETA|FR-P3|FRbeta	folate receptor beta	protein-coding
33.7-2	chr1	87684630	87685062	+	0.166667	NA	Intergenic	Intergenic	-313191	NR_038324	100505768	Hs.125247	NR_038324	ENSG00000227290	LINC01364	-	long intergenic non-protein coding RNA 1364	ncRNA
40.4001	chr2	15950394	15950729	+	0.166667	NA	Intergenic	L3|LINE|CR1	-8128	NR_161163	10408	Hs.651453	NR_110230	ENSG00000233718	MYCNOS	MYCN-AS1|N-CYM|NCYM|NYCM	MYCN opposite strand	ncRNA
59.4667-2	chr2	181794537	181795055	+	0.166667	NA	Intergenic	L1MC3|LINE|L1	-96934	NM_001287503	6744	Hs.196983	NM_006751	ENSG00000138434	ITPRID2	CS-1|CS1|KRAP|SPAG13|SSFA2	ITPR interacting domain containing 2	protein-coding
21.0334	chr14	50803720	50803959	+	0.166667	NA	intron (NM_016350, intron 4 of 28)	intron (NM_016350, intron 4 of 28)	-17958	NR_135258	105370489	Hs.569387	NR_135258	ENSG00000258843	LOC105370489	-	uncharacterized LOC105370489	ncRNA
42.2667-5	chr5	26658571	26658872	+	0.166667	NA	Intergenic	Intergenic	379865	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
53.8334	chr20	63345430	63346012	+	0.166667	NA	non-coding (NR_046317, exon 6 of 6)	non-coding (NR_046317, exon 6 of 6)	-14267	NR_110634	100130587	Hs.640129	NR_110634	ENSG00000203900	LOC100130587	-	uncharacterized LOC100130587	ncRNA
23.6334-4	chr4	162823271	162823491	+	0.166667	NA	Intergenic	MIR|SINE|MIR	270247	NR_039659	100616234		NR_039659	ENSG00000283468	MIR4454	-	microRNA 4454	ncRNA
42.8667-2	chr2	190185092	190185599	+	0.166667	NA	intron (NM_032321, intron 1 of 1)	MER34A|LTR|ERV1	4482	NM_001042519	84281	Hs.389311	NM_032321	ENSG00000187699	C2orf88	smAKAP	chromosome 2 open reading frame 88	protein-coding
17.3-6	chr5	116097253	116097471	+	0.166667	NA	intron (NM_001308080, intron 4 of 6)	MIR|SINE|MIR	11900	NM_001308080	51397	Hs.483136	NM_016144	ENSG00000145781	COMMD10	PTD002	COMM domain containing 10	protein-coding
34.5334-2	chr22	22841895	22842214	+	0.166667	NA	Intergenic	L1M4|LINE|L1	19278	NR_030755	723778		NR_030755	ENSG00000284049	MIR650	MIRN650|hsa-mir-650	microRNA 650	ncRNA
27.3333-5	chr2	169141270	169141800	+	0.166667	NA	intron (NM_004525, intron 71 of 78)	intron (NM_004525, intron 71 of 78)	60428	NM_001142271	10170	Hs.179608	NM_005771	ENSG00000073737	DHRS9	3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4	dehydrogenase/reductase 9	protein-coding
25.9667-4	chr17	64335834	64336042	+	0.166667	NA	intron (NM_000442, intron 14 of 15)	(ATG)n|Simple_repeat|Simple_repeat	54922	NM_000442	5175	Hs.376675	NM_000442	ENSG00000261371	PECAM1	CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM	platelet and endothelial cell adhesion molecule 1	protein-coding
47.9334	chr16	65496206	65496613	+	0.166667	NA	intron (NR_027755, intron 2 of 8)	MIR|SINE|MIR	79891	NR_027755	283867	Hs.444774	NM_001101346	ENSG00000261742	LINC00922	-	long intergenic non-protein coding RNA 922	ncRNA
32.2-2	chr2	6287137	6287575	+	0.166667	NA	Intergenic	Intergenic	88066	NR_110251	101929390	Hs.434407	NR_110251	ENSG00000227007	LINC01247	-	long intergenic non-protein coding RNA 1247	ncRNA
37.8666-3	chr5	65750304	65750681	+	0.166667	NA	intron (NM_020726, intron 1 of 12)	AluJr4|SINE|Alu	28287	NM_020726	57486	Hs.247460	NM_020726	ENSG00000123213	NLN	AGTBP|EP24.16|MEP|MOP	neurolysin	protein-coding
31.2667-9	chr5	146748417	146748690	+	0.166667	NA	intron (NM_001271899, intron 2 of 9)	L1MD1|LINE|L1	130232	NM_181675	5521	Hs.627618	NM_181674	ENSG00000156475	PPP2R2B	B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12	protein phosphatase 2 regulatory subunit Bbeta	protein-coding
22.7666-5	chr17	64707335	64707626	+	0.166667	NA	Intergenic	Intergenic	-45173	NM_022739	64750	Hs.515011	NM_022739	ENSG00000108854	SMURF2	-	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
37.8-5	chr17	60358508	60358864	+	0.166667	NA	intron (NM_032582, intron 1 of 33)	intron (NM_032582, intron 1 of 33)	33447	NM_032582	84669	Hs.132868	NM_032582	ENSG00000170832	USP32	NY-REN-60|USP10	ubiquitin specific peptidase 32	protein-coding
33.8667-5	chr12	33716369	33716660	+	0.166667	NA	Intergenic	Intergenic	-276695	NM_198992	341359	Hs.118703	NM_198992	ENSG00000110975	SYT10	-	synaptotagmin 10	protein-coding
43.5667-2	chr3	89533167	89533554	+	0.166667	NA	Intergenic	Intergenic	425739	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
25.8-10	chr16	52321910	52322114	+	0.166667	NA	Intergenic	L1MA7|LINE|L1	63448	NR_135281	283854	Hs.266768	NR_135281	ENSG00000260887	CASC22	LINC01373|LincRNA-ENST00000515084|TCONS_00024290	cancer susceptibility 22	ncRNA
25.1667-5	chr7	42805465	42805721	+	0.166667	NA	Intergenic	L1PB1|LINE|L1	-99146	NR_110833	101928795	Hs.566753	NR_110833	ENSG00000238284	LINC01448	-	long intergenic non-protein coding RNA 1448	ncRNA
39.6667-3	chr17	78808435	78808900	+	0.166667	NA	intron (NM_001321291, intron 13 of 20)	intron (NM_001321291, intron 13 of 20)	-26325	NM_004762	9267	Hs.191215	NM_004762	ENSG00000108669	CYTH1	B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7	cytohesin 1	protein-coding
41.0334-2	chrX	64191477	64191813	+	0.166667	NA	exon (NM_152424, exon 2 of 2)	exon (NM_152424, exon 2 of 2)	14063	NM_152424	139285	Hs.314225	NM_152424	ENSG00000184675	AMER1	FAM123B|OSCS|WTX	APC membrane recruitment protein 1	protein-coding
24.4334	chr15	78361972	78362214	+	0.166667	NA	Intergenic	Intergenic	21740	NM_004378	1381	Hs.346950	NM_004378	ENSG00000166426	CRABP1	CRABP|CRABP-I|CRABPI|RBP5	cellular retinoic acid binding protein 1	protein-coding
41.8001-3	chr7	80038908	80039235	+	0.166667	NA	Intergenic	Intergenic	-95760	NM_002069	2770	Hs.134587	NM_002069	ENSG00000127955	GNAI1	Gi	G protein subunit alpha i1	protein-coding
24.7666	chr12	75557739	75557952	+	0.166667	NA	Intergenic	Intergenic	-46236	NM_007043	11103	Hs.645517	NM_007043	ENSG00000111615	KRR1	HRB2|RIP-1	KRR1 small subunit processome component homolog	protein-coding
48.8001	chr10	37755589	37756034	+	0.166667	NA	Intergenic	AluJo|SINE|Alu	39364	NR_051997	100419868	Hs.741719	NR_051997		ZNF33BP1	-	zinc finger protein 33B pseudogene 1	pseudo
17.8667-8	chr18	44666521	44666684	+	0.166667	NA	Intergenic	L1MEg|LINE|L1	-13471	NM_001130110	26040	Hs.435458	NM_015559	ENSG00000152217	SETBP1	MRD29|SEB	SET binding protein 1	protein-coding
45.4667	chr11	3368715	3369139	+	0.166667	NA	intron (NR_046381, intron 4 of 6)	L1MA9|LINE|L1	10219	NM_001256823	7748	Hs.386294	NM_007152	ENSG00000005801	ZNF195	HRF1|ZNFP104	zinc finger protein 195	protein-coding
46.1667	chr19	33161450	33161969	+	0.166667	NA	intron (NR_135565, intron 8 of 11)	AluSz|SINE|Alu	29595	NM_173479	126248	Hs.211046	NM_173479	ENSG00000166359	WDR88	PQWD	WD repeat domain 88	protein-coding
16.3-6	chr2	131569449	131569546	+	0.166667	NA	Intergenic	L1M3|LINE|L1	-22545	NR_033885	440915	Hs.631267	NM_001017421		POTEKP	ACT|ACTBL3|POTE2delta|POTEK	POTE ankyrin domain family member K, pseudogene	pseudo
29.8-7	chr22	35230089	35230373	+	0.166667	NA	intron (NR_126356, intron 1 of 5)	MIRb|SINE|MIR	825	NR_126356	104310353	Hs.581009	NR_126356	ENSG00000233080	LINC01399	-	long intergenic non-protein coding RNA 1399	ncRNA
16.2334	chr2	189931941	189932111	+	0.166667	NA	Intergenic	Intergenic	130703	NM_005259	2660	Hs.41565	NM_005259	ENSG00000138379	MSTN	GDF8|MSLHP	myostatin	protein-coding
66.3001	chr4	183217387	183217982	+	0.166667	NA	intron (NM_024949, intron 4 of 22)	L1MEc|LINE|L1	22950	NR_126473	101928734	Hs.570713	NR_126473	ENSG00000251128	WWC2-AS1	-	WWC2 antisense RNA 1	ncRNA
39.8667-2	chr7	118712011	118712536	+	0.166667	NA	Intergenic	Intergenic	487569	NM_019644	56311	Hs.729340	NM_019644	ENSG00000106013	ANKRD7	TSA806	ankyrin repeat domain 7	protein-coding
45.3-4	chr5	35443396	35443748	+	0.166667	NA	Intergenic	L1PB1|LINE|L1	-174291	NM_024867	79925	Hs.298863	NM_024867	ENSG00000152582	SPEF2	CT122|KPL2	sperm flagellar 2	protein-coding
33.0667-2	chr5	104306121	104306564	+	0.166667	NA	Intergenic	Intergenic	-743553	NM_001300741	83594	Hs.434289	NM_031438	ENSG00000112874	NUDT12	-	nudix hydrolase 12	protein-coding
44.8334	chr10	8028178	8028655	+	0.166667	NA	Intergenic	Intergenic	24075	NR_104329	399717	Hs.158992	NM_207423	ENSG00000197308	GATA3-AS1	-	GATA3 antisense RNA 1	ncRNA
39.5667-2	chr2	162045885	162046433	+	0.166667	NA	intron (NM_001935, intron 4 of 25)	intron (NM_001935, intron 4 of 25)	28056	NM_001935	1803	Hs.368912	NM_001935	ENSG00000197635	DPP4	ADABP|ADCP2|CD26|DPPIV|TP103	dipeptidyl peptidase 4	protein-coding
31.7	chr1	237155449	237155769	+	0.166667	NA	intron (NM_001035, intron 1 of 104)	intron (NM_001035, intron 1 of 104)	113425	NM_001035	6262	Hs.109514	NM_001035	ENSG00000198626	RYR2	ARVC2|ARVD2|RYR-2|RyR|VTSIP	ryanodine receptor 2	protein-coding
61.0334-2	chr5	20112241	20112667	+	0.166667	NA	intron (NM_001291956, intron 2 of 14)	intron (NM_001291956, intron 2 of 14)	-124254	NM_001349563	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
58.7334	chr7	99860307	99860829	+	0.166667	NA	intron (NR_103869, intron 11 of 13)	LTR84a|LTR|ERVL	16465	NM_001005276	81392	Hs.647523	NM_001005276	ENSG00000244623	OR2AE1	OR2AE2	olfactory receptor family 2 subfamily AE member 1	protein-coding
23.6334-3	chr3	74185611	74185756	+	0.166667	NA	Intergenic	Intergenic	335457	NM_020872	5067	Hs.12723	NM_020872	ENSG00000113805	CNTN3	BIG-1|PANG|PCS	contactin 3	protein-coding
29.1-2	chr11	65121120	65121429	+	0.166667	NA	promoter-TSS (NR_037567)	promoter-TSS (NR_037567)	860	NM_001997	2197	Hs.387208	NM_001997	ENSG00000149806	FAU	FAU1|Fub1|Fubi|MNSFbeta|RPS30|S30|asr1	FAU ubiquitin like and ribosomal protein S30 fusion	protein-coding
19.3	chr1	52143311	52143519	+	0.166667	NA	intron (NM_007324, intron 1 of 17)	intron (NM_007324, intron 1 of 17)	1321	NM_004799	9372	Hs.532345	NM_004799	ENSG00000157077	ZFYVE9	MADHIP|NSP|PPP1R173|SARA|SMADIP	zinc finger FYVE-type containing 9	protein-coding
31.8667-7	chr9	110017538	110017844	+	0.166667	NA	intron (NM_147150, intron 7 of 9)	intron (NM_147150, intron 7 of 9)	-30907	NM_001198656	445815	Hs.591908	NM_007203	ENSG00000157654	PALM2-AKAP2	AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2	PALM2-AKAP2 fusion	protein-coding
12.6334-2	chr3	149442091	149442188	+	0.166667	NA	Intergenic	Intergenic	-32558	NM_004617	7104	Hs.133527	NM_004617	ENSG00000169903	TM4SF4	ILTMP|il-TMP	transmembrane 4 L six family member 4	protein-coding
35.6-7	chr2	216598224	216598680	+	0.166667	NA	intron (NR_110392, intron 2 of 3)	intron (NR_110392, intron 2 of 3)	8486	NR_110392	101928232	Hs.694592	NR_110392		LINC01280	-	long intergenic non-protein coding RNA 1280	ncRNA
55.6001-2	chr14	67337370	67337769	+	0.166667	NA	TTS (NM_015994)	TTS (NM_015994)	22235	NM_015994	51382	Hs.272630	NM_015994	ENSG00000100554	ATP6V1D	ATP6M|VATD|VMA8	ATPase H+ transporting V1 subunit D	protein-coding
55.9-2	chr6	108946415	108946941	+	0.166667	NA	intron (NM_001286609, intron 11 of 16)	intron (NM_001286609, intron 11 of 16)	-22575	NR_104137	101929716		NR_104137		ARMC2-AS1	-	ARMC2 antisense RNA 1	ncRNA
35.8333	chr12	62244945	62245456	+	0.166667	NA	Intergenic	Tigger3d|DNA|TcMar-Tigger	-15140	NM_001351162	9958	Hs.434951	NM_006313	ENSG00000135655	USP15	UNPH-2|UNPH4	ubiquitin specific peptidase 15	protein-coding
8.20002	chr2	116691664	116691713	+	0.166667	NA	Intergenic	Intergenic	-1123003	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
37.1999	chr5	115865504	115865846	+	0.166667	NA	intron (NM_001002924, intron 2 of 6)	L1M5|LINE|L1	23188	NR_157087	1176	Hs.406191	NM_001284	ENSG00000177879	AP3S1	CLAPS3|Sigma3A	adaptor related protein complex 3 subunit sigma 1	protein-coding
17.3333	chr1	21007646	21007822	+	0.166667	NA	intron (NM_003760, intron 2 of 31)	intron (NM_003760, intron 2 of 31)	-19302	NR_031657	100302155		NR_031657	ENSG00000221808	MIR1256	MIRN1256|hsa-mir-1256	microRNA 1256	ncRNA
30.0666-2	chr7	149188448	149188872	+	0.166667	NA	Intergenic	Intergenic	-6886	NM_003575	8427	Hs.729056	NM_003575	ENSG00000170265	ZNF282	HUB1	zinc finger protein 282	protein-coding
21.4333-7	chr15	41479236	41479386	+	0.166667	NA	intron (NM_015138, intron 16 of 17)	intron (NM_015138, intron 16 of 17)	-14563	NM_002220	3706	Hs.2722	NM_002220	ENSG00000137825	ITPKA	IP3-3KA|IP3KA	inositol-trisphosphate 3-kinase A	protein-coding
45.2334	chr18	1422198	1422628	+	0.166667	NA	Intergenic	Intergenic	-62784	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
41.8001	chr5	35756455	35756764	+	0.166667	NA	intron (NM_024867, intron 24 of 36)	intron (NM_024867, intron 24 of 36)	-100282	NM_002185	3575	Hs.591742	NM_002185	ENSG00000168685	IL7R	CD127|CDW127|IL-7R-alpha|IL7RA|ILRA	interleukin 7 receptor	protein-coding
43.1-3	chr9	128009977	128010541	+	0.166667	NA	Intergenic	Intergenic	-29270	NM_001035254	399665	Hs.535972	NM_203305	ENSG00000167106	FAM102A	C9orf132|EEIG1|SYM-3A|bA203J24.7	family with sequence similarity 102 member A	protein-coding
35.2667-4	chr9	121751510	121751788	+	0.166667	NA	intron (NM_138709, intron 1 of 13)	intron (NM_138709, intron 1 of 13)	8864	NM_138709	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding
45.2001	chr21	14997616	14997963	+	0.166667	NA	intron (NM_003489, intron 3 of 3)	MIR|SINE|MIR	67211	NM_003489	8204	Hs.155017	NM_003489	ENSG00000180530	NRIP1	CAKUT3|RIP140	nuclear receptor interacting protein 1	protein-coding
21.6334-2	chr13	50488697	50488902	+	0.166667	NA	intron (NR_109974, intron 4 of 6)	L1MA10|LINE|L1	38650	NR_125753	103689915	Hs.722230	NR_125753	ENSG00000186047	DLEU1-AS1	LINC01308	DLEU1 antisense RNA 1	ncRNA
24.6333-7	chr4	34220988	34221208	+	0.166667	NA	intron (NR_147184, intron 2 of 3)	intron (NR_147184, intron 2 of 3)	48649	NR_147184	105374394	Hs.570782	NR_147183	ENSG00000248685	LINC02484	-	long intergenic non-protein coding RNA 2484	ncRNA
23.8-6	chr2	152640372	152640599	+	0.166667	NA	intron (NM_052905, intron 24 of 25)	intron (NM_052905, intron 24 of 25)	76976	NM_001365597	55660	Hs.643580	NM_017892	ENSG00000196504	PRPF40A	FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40	pre-mRNA processing factor 40 homolog A	protein-coding
50.7666	chr10	109170720	109171068	+	0.166667	NA	Intergenic	Intergenic	752352	NM_001324136	7511	Hs.390623	NM_020383	ENSG00000108039	XPNPEP1	APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1	X-prolyl aminopeptidase 1	protein-coding
24.2334	chr1	229037701	229037889	+	0.166667	NA	Intergenic	L1M4|LINE|L1	137006	NR_039659	100616234		NR_039659	ENSG00000283468	MIR4454	-	microRNA 4454	ncRNA
53.9667	chr11	25852449	25853058	+	0.166667	NA	Intergenic	Intergenic	-336370	NM_001313726	63982	Hs.91791	NM_031418	ENSG00000134343	ANO3	C11orf25|DYT23|DYT24|GENX-3947|TMEM16C	anoctamin 3	protein-coding
37.2667-3	chr19	30115088	30115454	+	0.166667	NA	Intergenic	AluSx|SINE|Alu	173032	NM_003796	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	URI1 prefoldin like chaperone	protein-coding
31.6334-2	chr11	15144176	15144387	+	0.166667	NA	intron (NM_001042536, intron 1 of 12)	MIRb|SINE|MIR	-4821	NM_001278316	387755	Hs.591997	NM_001031853	ENSG00000188487	INSC	-	INSC spindle orientation adaptor protein	protein-coding
21.9334-2	chr5	52472129	52472322	+	0.166667	NA	Intergenic	L2c|LINE|L2	-315691	NM_015946	53918	Hs.644352	NM_015946	ENSG00000152684	PELO	CGI-17|PRO1770	pelota mRNA surveillance and ribosome rescue factor	protein-coding
45.6667-4	chr5	65584937	65585330	+	0.166667	NA	intron (NM_001278929, intron 8 of 9)	intron (NM_001278929, intron 8 of 9)	21837	NM_001278927	23398	Hs.121432	NM_015342	ENSG00000113593	PPWD1	-	peptidylprolyl isomerase domain and WD repeat containing 1	protein-coding
20.2-8	chr22	41227654	41227863	+	0.166667	NA	intron (NM_031488, intron 14 of 16)	intron (NM_031488, intron 14 of 16)	-10131	NR_148200	100506544	Hs.627409	NR_148200	ENSG00000235513	LOC100506544	-	uncharacterized LOC100506544	ncRNA
24.4-17	chr2	159998065	159998293	+	0.166667	NA	intron (NM_001007267, intron 11 of 26)	intron (NM_001007267, intron 11 of 26)	64436	NM_007366	22925	Hs.410477	NM_007366	ENSG00000153246	PLA2R1	CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R	phospholipase A2 receptor 1	protein-coding
33.0334	chr11	129067485	129067859	+	0.166667	NA	intron (NM_001142685, intron 5 of 21)	intron (NM_001142685, intron 5 of 21)	-43484	NM_014715	9743	Hs.440379	NM_014715	ENSG00000134909	ARHGAP32	GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP	Rho GTPase activating protein 32	protein-coding
28.9333-11	chr7	19172017	19172343	+	0.166667	NA	Intergenic	Intergenic	-26759	NM_152898	222894	Hs.592168	NM_152898	ENSG00000146618	FERD3L	N-TWIST|NATO3|NTWIST|PTFB|bHLHa31	Fer3 like bHLH transcription factor	protein-coding
15.7-6	chr2	169567939	169568130	+	0.166667	NA	intron (NM_001322049, intron 2 of 12)	intron (NM_001322049, intron 2 of 12)	5831	NM_024622	79675	Hs.529276	NM_024622	ENSG00000138399	FASTKD1	-	FAST kinase domains 1	protein-coding
32.7333-8	chr5	86816575	86816909	+	0.166667	NA	Intergenic	L3|LINE|CR1	69924	NR_105017	100505878	Hs.246405	NR_105017		LINC02059	-	long intergenic non-protein coding RNA 2059	ncRNA
26.3001	chr17	53796446	53796603	+	0.166667	NA	Intergenic	LTR16A|LTR|ERVL	-26403	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
28.9334-2	chr16	74896673	74896916	+	0.166667	NA	intron (NM_030581, intron 18 of 25)	intron (NM_030581, intron 18 of 25)	88329	NM_030581	79726	Hs.280951	NM_030581	ENSG00000103091	WDR59	CDW12|FP977|p90-120	WD repeat domain 59	protein-coding
28.4	chr10	82245855	82246242	+	0.166667	NA	intron (NM_001370082, intron 3 of 10)	intron (NM_001370082, intron 3 of 10)	-13128	NR_120666	101929590	Hs.733268	NR_120666	ENSG00000225738	NRG3-AS1	C10orf100|Em:AC010157.1	NRG3 antisense RNA 1	ncRNA
40.5-13	chr7	80782939	80783397	+	0.166667	NA	intron (NM_006379, intron 12 of 17)	intron (NM_006379, intron 12 of 17)	135883	NM_006379	10512	Hs.269109	NM_006379	ENSG00000075223	SEMA3C	SEMAE|SemE	semaphorin 3C	protein-coding
37.3	chr15	71038985	71039567	+	0.166667	NA	intron (NM_017691, intron 15 of 15)	intron (NM_017691, intron 15 of 15)	-102173	NM_024817	79875	Hs.387057	NM_024817	ENSG00000187720	THSD4	ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005	thrombospondin type 1 domain containing 4	protein-coding
29.7333-8	chr17	44263545	44263835	+	0.166667	NA	intron (NM_000342, intron 1 of 19)	intron (NM_000342, intron 1 of 19)	4445	NM_000342	6521	Hs.210751	NM_000342	ENSG00000004939	SLC4A1	AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR	solute carrier family 4 member 1 (Diego blood group)	protein-coding
34.8334	chr13	73533717	73534003	+	0.166667	NA	Intergenic	Charlie23a|DNA|hAT-Charlie	-30384	NR_047009	100874155	Hs.672679	NR_047009		LINC00392	-	long intergenic non-protein coding RNA 392	ncRNA
9.59999	chr17	6676836	6676923	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	19160	NR_045985	100652883	Hs.549540	NR_045985		ALOX15P1	ALOX15P	arachidonate 15-lipoxygenase pseudogene 1	pseudo
49.9667	chr16	64607763	64608405	+	0.166667	NA	Intergenic	Intergenic	513979	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
59.0666	chr2	19845166	19845743	+	0.166667	NA	Intergenic	Intergenic	-23400	NR_033875	400946	Hs.289062	NR_033875	ENSG00000228784	LINC00954	-	long intergenic non-protein coding RNA 954	ncRNA
12.2334	chr8	117501136	117501242	+	0.166667	NA	Intergenic	Intergenic	-19524	NM_001282986	90390	Hs.492612	NM_080651	ENSG00000164758	MED30	MED30S|THRAP6|TRAP25	mediator complex subunit 30	protein-coding
61.1334	chr15	61927088	61927634	+	0.166667	NA	intron (NM_001018088, intron 51 of 81)	intron (NM_001018088, intron 51 of 81)	133086	NM_020821	54832	Hs.511668	NM_017684	ENSG00000129003	VPS13C	PARK23	vacuolar protein sorting 13 homolog C	protein-coding
44.7-2	chr1	221505609	221506056	+	0.166667	NA	Intergenic	L1PA15-16|LINE|L1	-169536	NR_024236	400804	Hs.722626	NR_024236	ENSG00000234754	C1orf140	-	uncharacterized LOC400804	ncRNA
16.8667-12	chr5	127324223	127324412	+	0.166667	NA	intron (NM_001308119, intron 2 of 14)	intron (NM_001308119, intron 2 of 14)	33521	NM_001256545	84466	Hs.438709	NM_032446	ENSG00000145794	MEGF10	EMARDD	multiple EGF like domains 10	protein-coding
49.8	chr1	110574229	110574670	+	0.166667	NA	Intergenic	L2c|LINE|L2	31909	NM_004974	3737	Hs.248139	NM_004974	ENSG00000177301	KCNA2	EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2	potassium voltage-gated channel subfamily A member 2	protein-coding
42.5-2	chr14	48722908	48723286	+	0.166667	NA	Intergenic	MamRTE1|LINE|RTE-BovB	863283	NM_001030001	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29|uS14	ribosomal protein S29	protein-coding
38.5667-2	chr17	4316557	4316911	+	0.166667	NA	intron (NM_003342, intron 1 of 5)	AluJr|SINE|Alu	-44840	NR_110982	103021295	Hs.741319	NR_110982		LOC103021295	-	uncharacterized LOC103021295	ncRNA
26.9666-2	chr20	39694239	39694427	+	0.166667	NA	Intergenic	Intergenic	-310128	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA
31.3-11	chr6	84899925	84900251	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	-135490	NM_001080508	9096	Hs.251830	NM_001080508	ENSG00000112837	TBX18	CAKUT2	T-box transcription factor 18	protein-coding
54.1999	chr3	63079706	63080355	+	0.166667	NA	Intergenic	Intergenic	-22658	NR_027104	285401	Hs.211125	NR_027104	ENSG00000244342	LINC00698	-	long intergenic non-protein coding RNA 698	ncRNA
20.5-4	chr17	73926741	73926871	+	0.166667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-98269	NR_027146	283982	Hs.464079	NM_182564		LINC00469	C17orf54	long intergenic non-protein coding RNA 469	ncRNA
25.6333-7	chr2	74529069	74529358	+	0.166667	NA	promoter-TSS (NR_135772)	promoter-TSS (NR_135772)	-192	NM_001321728	27429	Hs.469045	NM_013247	ENSG00000115317	HTRA2	MGCA8|OMI|PARK13|PRSS25	HtrA serine peptidase 2	protein-coding
35.7-5	chr18	4515930	4516478	+	0.166667	NA	Intergenic	MLT1C-int|LTR|ERVL-MaLR	-60897	NM_004746	9229	Hs.594640	NM_004746	ENSG00000170579	DLGAP1	DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1	DLG associated protein 1	protein-coding
12.2333-8	chr8	67863839	67863958	+	0.166667	NA	Intergenic	Intergenic	-88148	NM_024870	80243	Hs.169943	NM_024870	ENSG00000046889	PREX2	DEP.2|DEPDC2|P-REX2|PPP1R129	phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2	protein-coding
38.1667-2	chr12	117128772	117129392	+	0.166667	NA	intron (NR_120464, intron 2 of 2)	intron (NR_120464, intron 2 of 2)	29615	NR_120464	101928244	Hs.742266	NR_120464		TESC-AS1	-	TESC antisense RNA 1 (head to head)	ncRNA
26.9667	chr14	61248425	61248741	+	0.166667	NA	Intergenic	Intergenic	32755	NM_001017970	161291	Hs.146180	NM_001017970	ENSG00000182107	TMEM30B	CDC50B	transmembrane protein 30B	protein-coding
24.1667-2	chr1	207221454	207221761	+	0.166667	NA	Intergenic	Intergenic	-100071	NM_001300902	1604	Hs.126517	NM_000574	ENSG00000196352	CD55	CHAPLE|CR|CROM|DAF|TC	CD55 molecule (Cromer blood group)	protein-coding
10.1667-4	chr20	51324683	51324805	+	0.166667	NA	Intergenic	Intergenic	128233	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA
43.7334-2	chr9	88985549	88985967	+	0.166667	NA	Intergenic	Intergenic	-5105	NM_001142413	286223	Hs.585118	NM_001001938	ENSG00000213694	C9orf47	C9orf108|bA791O21.3	chromosome 9 open reading frame 47	protein-coding
21.2666-9	chr6	70566426	70566758	+	0.166667	NA	promoter-TSS (NM_145267)	promoter-TSS (NM_145267)	-338	NM_145267	135154	Hs.418495	NM_145267	ENSG00000154079	SDHAF4	C6orf57|Sdh8	succinate dehydrogenase complex assembly factor 4	protein-coding
25-11	chr5	154903000	154903321	+	0.166667	NA	exon (NM_001252156, exon 19 of 28)	exon (NM_001252156, exon 19 of 28)	35051	NM_015465	25929	Hs.483921	NM_015465	ENSG00000082516	GEMIN5	GEMIN-5	gem nuclear organelle associated protein 5	protein-coding
29.3-9	chr8	81396990	81397210	+	0.166667	NA	Intergenic	Intergenic	50339	NM_002677	5375	Hs.571512	NM_002677	ENSG00000147588	PMP2	CMT1G|FABP8|M-FABP|MP2|P2	peripheral myelin protein 2	protein-coding
43.1-2	chr5	104615777	104616184	+	0.166667	NA	Intergenic	Intergenic	-483494	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
17.5667-11	chr6	133562183	133562367	+	0.166667	NA	intron (NR_109982, intron 5 of 8)	L1MB3|LINE|L1	-258872	NR_027030	154089	Hs.126165	NR_027030		LINC01312	-	long intergenic non-protein coding RNA 1312	ncRNA
16.4667	chr1	54619614	54619731	+	0.166667	NA	intron (NM_176782, intron 2 of 7)	MIRb|SINE|MIR	3853	NM_176782	338094	Hs.234786	NM_176782	ENSG00000162391	FAM151A	C1orf179	family with sequence similarity 151 member A	protein-coding
39.9	chr3	19651716	19652162	+	0.166667	NA	Intergenic	L1M3de|LINE|L1	282278	NM_144715	151651	Hs.733920	NM_144715	ENSG00000163576	EFHB	CFAP21	EF-hand domain family member B	protein-coding
13.1334	chr12	97228878	97228956	+	0.166667	NA	Intergenic	L2b|LINE|L2	-233859	NR_152618	196475	Hs.652568	NR_024037	ENSG00000255794	RMST	LINC00054|NCRMS|NCRNA00054	rhabdomyosarcoma 2 associated transcript	ncRNA
24.9-14	chr8	119018760	119018963	+	0.166667	NA	intron (NM_001324095, intron 1 of 7)	intron (NM_001324095, intron 1 of 7)	-48386	NM_006438	10584	Hs.176615	NM_006438	ENSG00000184374	COLEC10	3MC3|CL-34|CLL1	collectin subfamily member 10	protein-coding
39.2-7	chr5	42521836	42522357	+	0.166667	NA	intron (NM_001242400, intron 2 of 10)	intron (NM_001242400, intron 2 of 10)	-25947	NM_001242402	2690	Hs.125180	NM_000163	ENSG00000112964	GHR	GHBP|GHIP	growth hormone receptor	protein-coding
16.9333-5	chr12	26940111	26940462	+	0.166667	NA	intron (NM_015633, intron 1 of 6)	intron (NM_015633, intron 1 of 6)	1816	NM_015633	26127	Hs.591162	NM_015633	ENSG00000111790	FGFR1OP2	HSPC123-like|WIT3.0	FGFR1 oncogene partner 2	protein-coding
34.7999-3	chr6	49030946	49031195	+	0.166667	NA	Intergenic	Intergenic	432183	NM_000255	4594	Hs.485527	NM_000255	ENSG00000146085	MMUT	MCM|MUT	methylmalonyl-CoA mutase	protein-coding
29.3667-3	chr2	20768572	20768852	+	0.166667	NA	intron (NM_021925, intron 4 of 6)	MER52D|LTR|ERV1	54389	NM_001282720	60526	Hs.187823	NM_021925	ENSG00000118961	LDAH	C2orf43|hLDAH	lipid droplet associated hydrolase	protein-coding
36.9-5	chr6	80450997	80451360	+	0.166667	NA	Intergenic	LTR49-int|LTR|ERV1	344507	NM_183050	594	Hs.156414	NM_000056	ENSG00000083123	BCKDHB	BCKDE1B|BCKDH E1-beta|E1B	branched chain keto acid dehydrogenase E1 subunit beta	protein-coding
39.7-3	chr19	52324431	52324961	+	0.166667	NA	3' UTR (NM_001297624, exon 4 of 4)	3' UTR (NM_001297624, exon 4 of 4)	-11547	NM_001161425	162963	Hs.147025	NM_173530	ENSG00000167554	ZNF610	-	zinc finger protein 610	protein-coding
28.9334	chr14	28524312	28524627	+	0.166667	NA	Intergenic	Intergenic	240850	NR_125758	103695363	Hs.569360	NR_125758		FOXG1-AS1	FOXG1-AS	FOXG1 antisense RNA 1	ncRNA
28.0667	chr1	160065857	160066282	+	0.166667	NA	intron (NM_002241, intron 1 of 1)	intron (NM_002241, intron 1 of 1)	4091	NM_002241	3766	Hs.408960	NM_002241	ENSG00000177807	KCNJ10	BIRK-10|KCNJ13-PEN|KIR1.2|KIR4.1|SESAME	potassium voltage-gated channel subfamily J member 10	protein-coding
33.1667-4	chr4	84793785	84793984	+	0.166667	NA	intron (NM_014991, intron 21 of 67)	intron (NM_014991, intron 21 of 67)	-171732	NR_152771	404201	Hs.46730	NM_205857	ENSG00000180769	WDFY3-AS2	C4orf12|FBI4|NCRNA00247	WDFY3 antisense RNA 2	ncRNA
56.9001	chr1	102424615	102424957	+	0.166667	NA	Intergenic	Intergenic	-427552	NM_001288823	118427	Hs.484475	NM_058170	ENSG00000118733	OLFM3	NOE3|NOELIN3|OPTIMEDIN	olfactomedin 3	protein-coding
26.0333-2	chr1	115722128	115722461	+	0.166667	NA	intron (NM_001232, intron 7 of 10)	intron (NM_001232, intron 7 of 10)	46511	NM_001232	845	Hs.57975	NM_001232	ENSG00000118729	CASQ2	PDIB2	calsequestrin 2	protein-coding
49.7333	chr12	4360514	4361202	+	0.166667	NA	TTS (NM_020375)	TTS (NM_020375)	18854	NM_020638	8074	Hs.287370	NM_020638	ENSG00000118972	FGF23	ADHR|FGFN|HFTC2|HPDR2|HYPF|PHPTC	fibroblast growth factor 23	protein-coding
20.5334	chr1	244373773	244373912	+	0.166667	NA	intron (NM_001276349, intron 2 of 3)	AluSx1|SINE|Alu	21207	NM_001012970	200159	Hs.442703	NM_001012970	ENSG00000173728	C1orf100	-	chromosome 1 open reading frame 100	protein-coding
44.9-2	chr12	17031175	17031683	+	0.166667	NA	Intergenic	Intergenic	42682	NR_036619	728622	Hs.741380	NR_036619		SKP1P2	SKP1B|p19B	S-phase kinase associated protein 1 pseudogene 2	pseudo
34.7667-8	chr5	15991827	15992196	+	0.166667	NA	Intergenic	L1MA9|LINE|L1	56829	NR_030616	100126347		NR_030616	ENSG00000216077	MIR887	MIRN887|hsa-mir-887	microRNA 887	ncRNA
25.5667-8	chr18	7457277	7457518	+	0.166667	NA	intron (NM_001364581, intron 1 of 1)	intron (NM_001364581, intron 1 of 1)	3609	NM_001364581	112577592		NM_001364581		LOC112577592	-	uncharacterized LOC112577592	protein-coding
20.0333-5	chr15	66817322	66817538	+	0.166667	NA	Intergenic	Intergenic	115194	NR_027654	4091	Hs.153863	NM_005585	ENSG00000137834	SMAD6	AOVD2|HsT17432|MADH6|MADH7	SMAD family member 6	protein-coding
40.2667-5	chr6	121521372	121521807	+	0.166667	NA	Intergenic	MLT2D|LTR|ERVL	85943	NM_000165	2697	Hs.74471	NM_000165	ENSG00000152661	GJA1	AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA	gap junction protein alpha 1	protein-coding
19.8667-10	chr3	29569834	29570077	+	0.166667	NA	intron (NM_001003792, intron 3 of 13)	intron (NM_001003792, intron 3 of 13)	288643	NM_014483	27303	Hs.221436	NM_014483	ENSG00000144642	RBMS3	-	RNA binding motif single stranded interacting protein 3	protein-coding
18.6667-12	chr4	159498374	159498519	+	0.166667	NA	Intergenic	Intergenic	230637	NM_001351728	9693	Hs.744884	NM_014247	ENSG00000109756	RAPGEF2	CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP	Rap guanine nucleotide exchange factor 2	protein-coding
16.0334	chr3	9459879	9459995	+	0.166667	NA	intron (NM_001080517, intron 17 of 22)	intron (NM_001080517, intron 17 of 22)	62237	NM_001080517	55209	Hs.288164	NM_018187	ENSG00000168137	SETD5	-	SET domain containing 5	protein-coding
34.4667-2	chr18	62577474	62577723	+	0.166667	NA	3' UTR (NM_017742, exon 14 of 14)	3' UTR (NM_017742, exon 14 of 14)	54573	NR_126534	54877	Hs.114191	NM_017742	ENSG00000141664	ZCCHC2	C18orf49	zinc finger CCHC-type containing 2	protein-coding
18.2-11	chr2	25607669	25607792	+	0.166667	NA	intron (NM_033147, intron 4 of 19)	intron (NM_033147, intron 4 of 19)	42492	NM_001256308	1838	Hs.307720	NM_021907	ENSG00000138101	DTNB	-	dystrobrevin beta	protein-coding
55.3667	chr8	111610665	111611118	+	0.166667	NA	Intergenic	L1MEc|LINE|L1	234252	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
53.0666-3	chrX	133959063	133959633	+	0.166667	NA	intron (NM_001164618, intron 1 of 7)	intron (NM_001164618, intron 1 of 7)	26246	NM_001164618	2719	Hs.644108	NM_004484	ENSG00000147257	GPC3	DGSX|GTR2-2|MXR7|OCI-5|SDYS|SGB|SGBS|SGBS1	glypican 3	protein-coding
29.0667-2	chr5	165540545	165540761	+	0.166667	NA	Intergenic	AluSg|SINE|Alu	1070374	NR_105065	102546299	Hs.437730	NR_105065	ENSG00000241956	LOC102546299	-	uncharacterized LOC102546299	ncRNA
40.1333-9	chr7	25562828	25563291	+	0.166667	NA	Intergenic	Intergenic	100081	NR_157827	646588	Hs.72068	NR_157808	ENSG00000223561	LOC646588	-	uncharacterized LOC646588	ncRNA
28.7	chr13	64339748	64340224	+	0.166667	NA	Intergenic	MER4B|LTR|ERV1	-263975	NR_145420	144766	Hs.719557	NR_145420	ENSG00000227674	LINC00355	-	long intergenic non-protein coding RNA 355	ncRNA
50.8666	chr1	65440686	65441046	+	0.166667	NA	intron (NM_001003679, intron 2 of 19)	intron (NM_001003679, intron 2 of 19)	20150	NM_001198681	54741	Hs.23581	NM_017526	ENSG00000213625	LEPROT	LEPR|OB-RGRP|OBRGRP|VPS55	leptin receptor overlapping transcript	protein-coding
29.5667-11	chr6	802904	803330	+	0.166667	NA	Intergenic	Intergenic	-65381	NR_110853	101927691	Hs.552556	NR_110853		LOC101927691	-	uncharacterized LOC101927691	ncRNA
22.8666-5	chr14	28762955	28763137	+	0.166667	NA	intron (NR_125758, intron 1 of 6)	intron (NR_125758, intron 1 of 6)	2273	NR_125758	103695363	Hs.569360	NR_125758		FOXG1-AS1	FOXG1-AS	FOXG1 antisense RNA 1	ncRNA
16.2334-2	chr4	128032274	128032397	+	0.166667	NA	TTS (NM_025097)	TTS (NM_025097)	-28977	NM_018078	55132	Hs.654971	NM_018078	ENSG00000138709	LARP1B	LARP2	La ribonucleoprotein domain family member 1B	protein-coding
33.1334-3	chr20	12384705	12385026	+	0.166667	NA	Intergenic	AluY|SINE|Alu	466972	NM_014962	22903	Hs.709366	NM_014962	ENSG00000132640	BTBD3	dJ742J24.1	BTB domain containing 3	protein-coding
13.4667	chr1	100483652	100483765	+	0.166667	NA	intron (NM_001319212, intron 9 of 13)	intron (NM_001319212, intron 9 of 13)	-54431	NM_022049	54112	Hs.170053	NM_022049	ENSG00000181656	GPR88	COCPMR|STRG	G protein-coupled receptor 88	protein-coding
25.1334	chr5	93705132	93705282	+	0.166667	NA	intron (NM_032042, intron 10 of 10)	intron (NM_032042, intron 10 of 10)	36393	NM_153216	134187	Hs.678995	NM_153216	ENSG00000248483	POU5F2	SPRM-1	POU domain class 5, transcription factor 2	protein-coding
17.4667-15	chrX	30837688	30837792	+	0.166667	NA	intron (NR_145449, intron 2 of 2)	L1M5|LINE|L1	3117	NR_145449	727682		NR_145449		TAB3-AS1	CXorf29	TAB3 antisense RNA 1	ncRNA
31.2667-7	chr3	168924085	168924368	+	0.166667	NA	Intergenic	Intergenic	22281	NR_109989	100507661	Hs.65918	NR_109989	ENSG00000242268	LINC02082	-	long intergenic non-protein coding RNA 2082	ncRNA
63.2668	chr8	88789381	88789863	+	0.166667	NA	Intergenic	L1M5|LINE|L1	-462139	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
15.9334-2	chr6	36872437	36872597	+	0.166667	NA	intron (NM_001286636, intron 1 of 9)	intron (NM_001286636, intron 1 of 9)	673	NM_001286636	221477	Hs.433381	NM_152734	ENSG00000198663	C6orf89	BRAP|PS1TP5TP1	chromosome 6 open reading frame 89	protein-coding
22.2333-8	chr2	47836633	47836782	+	0.166667	NA	intron (NM_025133, intron 4 of 22)	intron (NM_025133, intron 4 of 22)	52012	NM_025133	80204	Hs.352677	NM_012167	ENSG00000138081	FBXO11	FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1	F-box protein 11	protein-coding
46.1-5	chr6	66906811	66907201	+	0.166667	NA	Intergenic	Intergenic	1119127	NR_026540	442229	Hs.390414	NR_026540		SLC25A51P1	MCART3P|bA707M13.1	SLC25A51 pseudogene 1	pseudo
51.4334	chr10	62453432	62454079	+	0.166667	NA	intron (NM_199451, intron 3 of 7)	L1ME4c|LINE|L1	-66693	NM_199452	22891	Hs.22653	NM_014951	ENSG00000138311	ZNF365	Su48|UAN|ZNF365D	zinc finger protein 365	protein-coding
17.4667	chr1	73888941	73889090	+	0.166667	NA	Intergenic	LTR53B|LTR|ERVL	214336	NR_146300	109729166	Hs.563902	NR_146300		LINC02238	-	long intergenic non-protein coding RNA 2238	ncRNA
57.1	chr21	32149140	32149614	+	0.166667	NA	Intergenic	ERVL-E-int|LTR|ERVL	-63082	NR_038033	100551499	Hs.224449	NR_038033		LINC00159	C21orf44|NCRNA00159	long intergenic non-protein coding RNA 159	ncRNA
23.6334	chr1	114797390	114797565	+	0.166667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-16792	NR_049741	80143	Hs.709277	NM_025073	ENSG00000052723	SIKE1	SIKE	suppressor of IKBKE 1	protein-coding
52.7001-2	chr3	164871320	164871803	+	0.166667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-40081	NR_126405	104355289	Hs.574909	NR_126405	ENSG00000241767	LINC01324	-	long intergenic non-protein coding RNA 1324	ncRNA
17.5667-4	chr17	50791554	50791781	+	0.166667	NA	Intergenic	Intergenic	23017	NR_107026	102466918		NR_107026	ENSG00000278672	MIR8059	hsa-mir-8059	microRNA 8059	ncRNA
25.9333-8	chr9	112175285	112175632	+	0.166667	NA	promoter-TSS (NM_001282643)	promoter-TSS (NM_001282643)	-161	NM_001282643	64420	Hs.494827	NM_022486	ENSG00000106868	SUSD1	-	sushi domain containing 1	protein-coding
27.1-8	chr4	32495356	32495648	+	0.166667	NA	Intergenic	Intergenic	144464	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
33.5667	chr1	107775065	107775383	+	0.166667	NA	intron (NM_006113, intron 4 of 26)	intron (NM_006113, intron 4 of 26)	-86725	NM_001079874	10451	Hs.267659	NM_006113	ENSG00000134215	VAV3	-	vav guanine nucleotide exchange factor 3	protein-coding
32.7667	chr1	6282636	6282891	+	0.166667	NA	intron (NM_181866, intron 7 of 8)	intron (NM_181866, intron 7 of 8)	-21665	NM_207370	387509	Hs.531581	NM_207370	ENSG00000158292	GPR153	PGR1	G protein-coupled receptor 153	protein-coding
42.2-5	chr4	88614516	88614982	+	0.166667	NA	intron (NM_001318505, intron 3 of 8)	intron (NM_001318505, intron 3 of 8)	22269	NM_001318505	8916	Hs.35804	NM_014606	ENSG00000138641	HERC3	-	HECT and RLD domain containing E3 ubiquitin protein ligase 3	protein-coding
25.0333-2	chr1	76141918	76142192	+	0.166667	NA	intron (NM_001349108, intron 1 of 3)	intron (NM_001349108, intron 1 of 3)	67309	NM_001349106	256435	Hs.337040	NM_152996	ENSG00000184005	ST6GALNAC3	PRO7177|SIAT7C|ST6GALNACIII|STY	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	protein-coding
18.6-4	chr11	21860680	21860825	+	0.166667	NA	Intergenic	Intergenic	-332333	NM_001142649	203859	Hs.154329	NM_213599	ENSG00000171714	ANO5	GDD1|LGMD2L|LGMDR12|TMEM16E	anoctamin 5	protein-coding
50.5999-2	chr8	113999634	114000088	+	0.166667	NA	Intergenic	Intergenic	-562922	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
46.2001	chr2	16957380	16957785	+	0.166667	NA	Intergenic	Intergenic	-291748	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding
30.6-7	chr2	96166317	96166666	+	0.166667	NA	Intergenic	L1MB7|LINE|L1	-21051	NM_004418	1844	Hs.1183	NM_004418	ENSG00000158050	DUSP2	PAC-1|PAC1	dual specificity phosphatase 2	protein-coding
29.9667-2	chr10	99241800	99242367	+	0.166667	NA	Intergenic	Intergenic	-6208	NM_001166246	60495	Hs.500750	NM_021828	ENSG00000172987	HPSE2	HPA2|HPR2|UFS|UFS1	heparanase 2 (inactive)	protein-coding
44.5667	chr3	163864244	163864543	+	0.166667	NA	Intergenic	LTR1B0|LTR|ERV1	307163	NR_031665	100302148		NR_031665	ENSG00000221251	MIR1263	MIRN1263|hsa-mir-1263	microRNA 1263	ncRNA
37.1667-3	chr7	26972720	26972960	+	0.166667	NA	Intergenic	L1PA13|LINE|L1	-108250	NM_003930	8935	Hs.200770	NM_003930	ENSG00000005020	SKAP2	PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R	src kinase associated phosphoprotein 2	protein-coding
44.9334	chr1	59960940	59961367	+	0.166667	NA	Intergenic	L1MB7|LINE|L1	-34355	NR_134982	1573	Hs.152096	NM_000775	ENSG00000134716	CYP2J2	CPJ2|CYPIIJ2	cytochrome P450 family 2 subfamily J member 2	protein-coding
40.5333-9	chr8	113740498	113741013	+	0.166667	NA	Intergenic	Intergenic	-303816	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
44.5333-6	chr20	56642260	56642774	+	0.166667	NA	Intergenic	Intergenic	13211	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding
47.1-2	chr16	62731397	62731802	+	0.166667	NA	Intergenic	(TGAATGT)n|Simple_repeat|Simple_repeat	-695161	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
39.7667-3	chr10	12789005	12789341	+	0.166667	NA	intron (NM_001351032, intron 7 of 11)	MER30|DNA|hAT-Charlie	-63820	NR_031752	100313841		NR_031752	ENSG00000221331	MIR548Q	-	microRNA 548q	ncRNA
32.1334-3	chr8	143968872	143969339	+	0.166667	NA	intron (NM_000445, intron 2 of 32)	L1MB8|LINE|L1	4424	NM_201378	5339	Hs.434248	NM_000445	ENSG00000178209	PLEC	EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN	plectin	protein-coding
48.7666	chr12	128684791	128685268	+	0.166667	NA	intron (NM_001136103, intron 5 of 8)	intron (NM_001136103, intron 5 of 8)	138929	NM_145648	121260	Hs.507260	NM_145648	ENSG00000139370	SLC15A4	FP12591|PHT1|PTR4	solute carrier family 15 member 4	protein-coding
27.0333-6	chr17	44108679	44108884	+	0.166667	NA	intron (NM_001015053, intron 3 of 26)	(A)n|Simple_repeat|Simple_repeat	-7131	NR_136415	105371789	Hs.579304	NR_136415	ENSG00000267638	LOC105371789	-	uncharacterized LOC105371789	ncRNA
25.5667-14	chr7	1683514	1683724	+	0.166667	NA	Intergenic	L1MB8|LINE|L1	-4500	NM_001128636	392617	Hs.42896	NM_001128636	ENSG00000225968	ELFN1	PPP1R28	extracellular leucine rich repeat and fibronectin type III domain containing 1	protein-coding
16.4-10	chr6	118690504	118690683	+	0.166667	NA	intron (NM_001178035, intron 1 of 13)	MLT1K|LTR|ERVL-MaLR	19482	NM_001178035	387119	Hs.656959	NM_206921	ENSG00000111860	CEP85L	C6orf204|NY-BR-15|bA57K17.2	centrosomal protein 85 like	protein-coding
28.0666-5	chr8	83501205	83501580	+	0.166667	NA	Intergenic	Intergenic	97634	NR_122034	103352670	Hs.399852	NR_122034	ENSG00000253898	LINC01419	LVCAT7|TCONS_00014497	long intergenic non-protein coding RNA 1419	ncRNA
32.0334-3	chr7	54529339	54529679	+	0.166667	NA	Intergenic	Intergenic	-12816	NM_001301009	222008	Hs.335933	NM_182546	ENSG00000170419	VSTM2A	VSTM2	V-set and transmembrane domain containing 2A	protein-coding
53.7999	chr10	23897471	23898296	+	0.166667	NA	intron (NM_001098500, intron 1 of 18)	intron (NM_001098500, intron 1 of 18)	203156	NM_001098500	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	ETL4|SKT	KIAA1217	protein-coding
39.4-8	chr5	12845937	12846557	+	0.166667	NA	Intergenic	L1M2c|LINE|L1	178388	NR_039659	100616234		NR_039659	ENSG00000283468	MIR4454	-	microRNA 4454	ncRNA
35.7334	chr3	176900043	176900266	+	0.166667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-83153	NR_110819	101928684	Hs.639352	NR_110819	ENSG00000228308	LINC01209	-	long intergenic non-protein coding RNA 1209	ncRNA
21.9-4	chr14	60841478	60841660	+	0.166667	NA	intron (NM_002431, intron 6 of 7)	L1MEc|LINE|L1	106808	NM_002431	4331	Hs.509523	NM_002431	ENSG00000020426	MNAT1	CAP35|MAT1|RNF66|TFB3	MNAT1 component of CDK activating kinase	protein-coding
29.5667-4	chr2	52078822	52079268	+	0.166667	NA	intron (NR_135237, intron 7 of 10)	intron (NR_135237, intron 7 of 10)	-291603	NR_135239	105374596		NR_135239	ENSG00000225444	LINC01867	-	long intergenic non-protein coding RNA 1867	ncRNA
44.8333	chr13	88045162	88045456	+	0.166667	NA	Intergenic	Intergenic	-97558	NR_131919	105370306	Hs.560133	NR_131919	ENSG00000231019	LINC00373	-	long intergenic non-protein coding RNA 373	ncRNA
34.1667-3	chr8	85076641	85076895	+	0.166667	NA	Intergenic	Intergenic	-30470	NM_001349639	85444	Hs.193115	NM_033402	ENSG00000133739	LRRCC1	CLERC|CLERK|SAP2|VFL1	leucine rich repeat and coiled-coil centrosomal protein 1	protein-coding
23.5-5	chr14	59407780	59407930	+	0.166667	NA	Intergenic	Intergenic	57525	NM_022571	64582	Hs.647573	NM_022571	ENSG00000181619	GPR135	HUMNPIIY20	G protein-coupled receptor 135	protein-coding
14.4333-7	chr9	71724701	71724839	+	0.166667	NA	intron (NM_013390, intron 11 of 23)	intron (NM_013390, intron 11 of 23)	43743	NM_001135820	23670	Hs.494146	NM_013390	ENSG00000135048	CEMIP2	TMEM2	cell migration inducing hyaluronidase 2	protein-coding
53.4	chr1	15056641	15057122	+	0.166667	NA	intron (NM_001370231, intron 6 of 8)	intron (NM_001370231, intron 6 of 8)	95583	NR_027136	200197	Hs.531424	NM_182534	ENSG00000175147	TMEM51-AS1	C1orf126	TMEM51 antisense RNA 1	ncRNA
38.2001-2	chr6	68053241	68053576	+	0.166667	NA	Intergenic	Intergenic	-1943	NR_125869	102723883	Hs.566528	NR_125869	ENSG00000223504	LOC102723883	-	uncharacterized LOC102723883	ncRNA
27.5667	chr16	65029099	65029371	+	0.166667	NA	intron (NM_001797, intron 2 of 12)	intron (NM_001797, intron 2 of 12)	92828	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
15.4-9	chr14	53147880	53147994	+	0.166667	NA	intron (NM_030637, intron 1 of 11)	intron (NM_030637, intron 1 of 11)	5386	NM_001160147	80821	Hs.125525	NM_030637	ENSG00000100523	DDHD1	PA-PLA1|PAPLA1|SPG28	DDHD domain containing 1	protein-coding
37.4334	chr15	43053953	43054229	+	0.166667	NA	intron (NM_174916, intron 12 of 46)	AluJo|SINE|Alu	51947	NM_174916	197131	Hs.591121	NM_174916	ENSG00000159459	UBR1	JBS	ubiquitin protein ligase E3 component n-recognin 1	protein-coding
17.3333-5	chr18	5527071	5527245	+	0.166667	NA	intron (NM_001330557, intron 1 of 21)	intron (NM_001330557, intron 1 of 21)	13398	NM_001281533	23136	Hs.213394	NM_012307	ENSG00000082397	EPB41L3	4.1B|DAL-1|DAL1	erythrocyte membrane protein band 4.1 like 3	protein-coding
25.1333-15	chr8	15838349	15838594	+	0.166667	NA	Intergenic	Intergenic	298208	NM_006765	7991	Hs.426324	NM_006765	ENSG00000104723	TUSC3	D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2	tumor suppressor candidate 3	protein-coding
44.1999	chr2	51292082	51292477	+	0.166667	NA	intron (NR_135237, intron 2 of 10)	intron (NR_135237, intron 2 of 10)	259678	NR_135237	730100	Hs.640140	NR_135237	ENSG00000231918	LOC730100	-	uncharacterized LOC730100	ncRNA
38.2334	chr10	12787354	12787699	+	0.166667	NA	intron (NM_001351032, intron 7 of 11)	intron (NM_001351032, intron 7 of 11)	-62173	NR_031752	100313841		NR_031752	ENSG00000221331	MIR548Q	-	microRNA 548q	ncRNA
19.4667-8	chrX	71308397	71308555	+	0.166667	NA	Intergenic	Tigger2a|DNA|TcMar-Tigger	6726	NM_001303277	26548	Hs.109999	NM_012278	ENSG00000147166	ITGB1BP2	CHORDC3|ITGB1BP|MELUSIN|MSTP015	integrin subunit beta 1 binding protein 2	protein-coding
61.7334	chr20	55191522	55192265	+	0.166667	NA	Intergenic	L1M5|LINE|L1	-231150	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA
26.2-26	chr9	31079512	31079808	+	0.166667	NA	Intergenic	Intergenic	301830	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
54.4667	chr13	21284531	21284911	+	0.166667	NA	3' UTR (NM_001365454, exon 5 of 5)	3' UTR (NM_001365454, exon 5 of 5)	13370	NM_001365454	101928764		NM_001365454		LOC101928764	-	coiled-coil domain-containing protein 144B	protein-coding
15.2-5	chr5	104114005	104114116	+	0.166667	NA	Intergenic	Intergenic	-551271	NM_001300741	83594	Hs.434289	NM_031438	ENSG00000112874	NUDT12	-	nudix hydrolase 12	protein-coding
41.6-9	chr6	85220352	85220762	+	0.166667	NA	Intergenic	L1MA3|LINE|L1	169629	NR_134634	101928820	Hs.587370	NR_134633	ENSG00000234155	LINC02535	-	long intergenic non-protein coding RNA 2535	ncRNA
55.8	chr12	12937636	12938103	+	0.166667	NA	intron (NR_149067, intron 1 of 2)	intron (NR_149067, intron 1 of 2)	10143	NR_149067	100506314	Hs.127718	NR_038920	ENSG00000247498	GPRC5D-AS1	-	GPRC5D and HEBP1 antisense RNA 1	ncRNA
17.9667-5	chr2	174029100	174029267	+	0.166667	NA	Intergenic	Tigger8|DNA|TcMar-Tigger	3903	NR_136175	100128905	Hs.456944	NR_136175	ENSG00000260868	LINC01960	-	long intergenic non-protein coding RNA 1960	ncRNA
40.6334-5	chr5	28950530	28950966	+	0.166667	NA	Intergenic	Intergenic	23878	NR_033961	729862	Hs.646006	NR_033961		LSP1P3	-	LSP1 pseudogene 3	pseudo
63.3333	chr2	186122783	186123569	+	0.166667	NA	Intergenic	L1M3|LINE|L1	-36859	NR_110218	101927217	Hs.130011	NR_110218	ENSG00000237877	LINC01473	-	long intergenic non-protein coding RNA 1473	ncRNA
21.3333	chr11	25769336	25769655	+	0.166667	NA	Intergenic	L2a|LINE|L2	-419628	NM_001313726	63982	Hs.91791	NM_031418	ENSG00000134343	ANO3	C11orf25|DYT23|DYT24|GENX-3947|TMEM16C	anoctamin 3	protein-coding
25.0667-9	chr5	118580584	118580748	+	0.166667	NA	Intergenic	MamRTE1|LINE|RTE-BovB	-15522	NR_104998	102467225	Hs.582523	NR_104998	ENSG00000249128	LINC02215	-	long intergenic non-protein coding RNA 2215	ncRNA
46.9001	chr2	5481866	5482192	+	0.166667	NA	Intergenic	Intergenic	209089	NR_110580	102723818	Hs.128107	NR_110580		LINC01248	-	long intergenic non-protein coding RNA 1248	ncRNA
39.0334-3	chr7	38161526	38161875	+	0.166667	NA	Intergenic	HERVK22-int|LTR|ERVK	-16545	NM_001363347	83930	Hs.309753	NM_032016	ENSG00000010270	STARD3NL	MENTHO	STARD3 N-terminal like	protein-coding
45.6999-3	chr6	50353530	50353915	+	0.166667	NA	Intergenic	Intergenic	-303793	NM_001369057	245915	Hs.571092	NM_001037498	ENSG00000180872	DEFB112	DEFB-12	defensin beta 112	protein-coding
30.4667-8	chr6	125823416	125823849	+	0.166667	NA	intron (NM_001199621, intron 2 of 14)	intron (NM_001199621, intron 2 of 14)	-4774	NR_126386	104355145	Hs.590370	NR_126386	ENSG00000232131	NCOA7-AS1	-	NCOA7 antisense RNA 1	ncRNA
46.8-5	chr4	64232810	64233322	+	0.166667	NA	Intergenic	Intergenic	176384	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
38.0334	chr8	138723973	138724301	+	0.166667	NA	intron (NM_152888, intron 25 of 64)	intron (NM_152888, intron 25 of 64)	189904	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
10.4667-5	chr7	34366152	34366214	+	0.166667	NA	intron (NR_033665, intron 3 of 3)	intron (NR_033665, intron 3 of 3)	-292035	NM_001300933	387129	Hs.652373	NM_207172	ENSG00000187258	NPSR1	ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1	neuropeptide S receptor 1	protein-coding
36.7667	chr11	85002993	85003349	+	0.166667	NA	intron (NM_001351274, intron 5 of 26)	Charlie29a|DNA|hAT-Charlie	-79750	NM_001300983	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
22.3334	chr9	76509028	76509190	+	0.166667	NA	Intergenic	Intergenic	8476	NM_001097636	2650	Hs.521568	NM_001490	ENSG00000187210	GCNT1	C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2	glucosaminyl (N-acetyl) transferase 1	protein-coding
14.6333-16	chr9	131408529	131408669	+	0.166667	NA	Intergenic	Intergenic	-21491	NM_013318	84726	Hs.743955	NM_013318	ENSG00000130723	PRRC2B	BAT2L|BAT2L1|KIAA0515|LQFBS-1	proline rich coiled-coil 2B	protein-coding
17.6333-9	chr9	108260551	108260750	+	0.166667	NA	Intergenic	L2c|LINE|L2	595336	NM_006686	10880	Hs.534390	NM_006686	ENSG00000148156	ACTL7B	Tact1	actin like 7B	protein-coding
25-8	chr3	15545167	15545505	+	0.166667	NA	Intergenic	L1MA3|LINE|L1	-23630	NM_080539	8292	Hs.146735	NM_005677	ENSG00000206561	COLQ	CMS5|EAD	collagen like tail subunit of asymmetric acetylcholinesterase	protein-coding
31.2667-3	chr13	76921025	76921477	+	0.166667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-7200	NR_026983	690	Hs.567241	NR_026983		BTF3P11	BTF3L1|HUMBTFB|OCIF|OPG|TNFRSF11B	basic transcription factor 3 pseudogene 11	pseudo
14.5333-11	chr7	144850985	144851138	+	0.166667	NA	Intergenic	L1MEc|LINE|L1	-15008	NM_001350894	27010	Hs.660232	NM_022445	ENSG00000196511	TPK1	HTPK1|PP20|THMD5	thiamin pyrophosphokinase 1	protein-coding
34.8667-5	chr5	154510126	154510548	+	0.166667	NA	Intergenic	L1MB8|LINE|L1	-32110	NM_004821	9421	Hs.152531	NM_004821	ENSG00000113196	HAND1	Hxt|Thing1|bHLHa27|eHand	heart and neural crest derivatives expressed 1	protein-coding
32.9334-2	chr14	43909635	43909914	+	0.166667	NA	Intergenic	L1M5|LINE|L1	597509	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
44.7334-2	chr2	217901841	217902304	+	0.166667	NA	intron (NM_001308023, intron 3 of 29)	intron (NM_001308023, intron 3 of 29)	-1444	NR_106867	102465485		NR_106867	ENSG00000275458	MIR6809	hsa-mir-6809	microRNA 6809	ncRNA
64.6332	chr2	239577662	239578489	+	0.166667	NA	Intergenic	Intergenic	176327	NR_135577	101928111	Hs.534680	NR_135575	ENSG00000222020	HDAC4-AS1	-	HDAC4 antisense RNA 1	ncRNA
24.9-4	chr14	61809486	61809790	+	0.166667	NA	Intergenic	Intergenic	-2524	NM_001367650	83851	Hs.404139	NM_031914	ENSG00000139973	SYT16	CHR14SYT|SYT14L|Strep14|syt14r	synaptotagmin 16	protein-coding
26.3	chr1	26878133	26878374	+	0.166667	NA	3' UTR (NM_018066, exon 5 of 5)	3' UTR (NM_018066, exon 5 of 5)	12030	NM_018066	54707	Hs.14333	NM_018066	ENSG00000142751	GPN2	ATPBD1B	GPN-loop GTPase 2	protein-coding
50.5334	chr10	82102189	82102764	+	0.166667	NA	intron (NR_163253, intron 2 of 10)	L1MEf|LINE|L1	130444	NR_120666	101929590	Hs.733268	NR_120666	ENSG00000225738	NRG3-AS1	C10orf100|Em:AC010157.1	NRG3 antisense RNA 1	ncRNA
24.0334	chr10	100124248	100124416	+	0.166667	NA	Intergenic	(AGGATAC)n|Simple_repeat|Simple_repeat	-42463	NM_001308	1369	Hs.2246	NM_001308	ENSG00000120054	CPN1	CPN|SCPN	carboxypeptidase N subunit 1	protein-coding
55.4666-4	chr2	54646593	54647278	+	0.166667	NA	intron (NM_178313, intron 22 of 30)	intron (NM_178313, intron 22 of 30)	-78077	NM_001039753	400954	Hs.656692	NM_001039753	ENSG00000214595	EML6	-	EMAP like 6	protein-coding
41.7334-3	chr4	30569395	30569753	+	0.166667	NA	Intergenic	Intergenic	-150795	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
60.7334	chr7	29059745	29060347	+	0.166667	NA	intron (NM_001371256, intron 15 of 16)	L1MC1|LINE|L1	-64987	NR_120523	101928168	Hs.666750	NR_120523	ENSG00000285412	LOC101928168	-	uncharacterized LOC101928168	ncRNA
41.0001	chr2	22005374	22005747	+	0.166667	NA	Intergenic	Intergenic	-294908	NR_038837	645949	Hs.456782	NR_038837	ENSG00000229621	LINC01822	-	long intergenic non-protein coding RNA 1822	ncRNA
49.5667	chr1	90009969	90010415	+	0.166667	NA	exon (NM_182976, exon 6 of 12)	exon (NM_182976, exon 6 of 12)	15082	NM_181781	284695	Hs.306221	NM_181781	ENSG00000162664	ZNF326	ZAN75|ZIRD|Zfp326|dJ871E2.1	zinc finger protein 326	protein-coding
18.3667-12	chr6	105937746	105937856	+	0.166667	NA	Intergenic	ORSL|DNA|hAT-Tip100	-148535	NM_001198	639	Hs.436023	NM_001198	ENSG00000057657	PRDM1	BLIMP1|PRDI-BF1	PR/SET domain 1	protein-coding
31.6334	chr1	105535628	105535950	+	0.166667	NA	Intergenic	Intergenic	83146	NR_125954	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
29.4334-2	chr17	48495944	48496306	+	0.166667	NA	Intergenic	Intergenic	34886	NM_002144	3211	Hs.99992	NM_002144	ENSG00000120094	HOXB1	HCFP3|HOX2|HOX2I|Hox-2.9	homeobox B1	protein-coding
40.3-7	chr6	291356	291676	+	0.166667	NA	promoter-TSS (NM_020185)	promoter-TSS (NM_020185)	-541	NR_104475	56940	Hs.29106	NM_020185	ENSG00000112679	DUSP22	JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX	dual specificity phosphatase 22	protein-coding
49.8-3	chr18	43864966	43865481	+	0.166667	NA	Intergenic	MIR|SINE|MIR	-587733	NM_020783	6860	Hs.8059	NM_020783	ENSG00000132872	SYT4	HsT1192	synaptotagmin 4	protein-coding
39.5667-6	chr9	27847495	27847841	+	0.166667	NA	Intergenic	MER5B|DNA|hAT-Charlie	-273802	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
18.5667-15	chr9	128185667	128185793	+	0.166667	NA	exon (NM_001131018, exon 4 of 17)	exon (NM_001131018, exon 4 of 17)	5842	NM_001131017	25792	Hs.212395	NM_012127	ENSG00000148337	CIZ1	LSFR1|NP94|ZNF356	CDKN1A interacting zinc finger protein 1	protein-coding
56.2333	chr12	5178485	5179137	+	0.166667	NA	Intergenic	Intergenic	64340	NR_120477	101929584	Hs.436529	NR_120476	ENSG00000256115	LINC02443	-	long intergenic non-protein coding RNA 2443	ncRNA
45.7001-3	chr7	10958128	10958595	+	0.166667	NA	Intergenic	Intergenic	-15511	NM_014660	9678	Hs.655688	NM_014660	ENSG00000106443	PHF14	-	PHD finger protein 14	protein-coding
25.4334	chr13	95445350	95445522	+	0.166667	NA	intron (NM_182848, intron 1 of 4)	intron (NM_182848, intron 1 of 4)	11837	NM_182848	9071	Hs.534377	NM_006984	ENSG00000134873	CLDN10	CPETRL3|HELIX|OSP-L|OSPL	claudin 10	protein-coding
9.8-7	chr8	82855691	82855793	+	0.166667	NA	Intergenic	Intergenic	-56362	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
41.5-3	chr15	55187505	55188314	+	0.166667	NA	intron (NM_016304, intron 3 of 5)	A-rich|Low_complexity|Low_complexity	9032	NM_016304	51187	Hs.274772	NM_016304	ENSG00000137876	RSL24D1	C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3	ribosomal L24 domain containing 1	protein-coding
39.2667-4	chr3	111254851	111255232	+	0.166667	NA	Intergenic	Intergenic	183225	NM_015480	25945	Hs.293917	NM_015480	ENSG00000177707	NECTIN3	CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3	nectin cell adhesion molecule 3	protein-coding
39.9334	chr2	186372689	186372956	+	0.166667	NA	Intergenic	Intergenic	-113438	NM_018471	55854	Hs.741180	NM_018471	ENSG00000065548	ZC3H15	HT010|LEREPO4|MSTP012	zinc finger CCCH-type containing 15	protein-coding
20.2-3	chr11	64360184	64360395	+	0.166667	NA	exon (NM_001300802, exon 3 of 17)	exon (NM_001300802, exon 3 of 17)	1127	NM_001006944	8986	Hs.105584	NM_003942	ENSG00000162302	RPS6KA4	MSK2|RSK-B|S6K-alpha-4	ribosomal protein S6 kinase A4	protein-coding
30.1-3	chr15	73682632	73683052	+	0.166667	NA	Intergenic	Intergenic	-1439	NM_025240	80381	Hs.744915	NM_025240	ENSG00000103855	CD276	4Ig-B7-H3|B7-H3|B7H3|B7RP-2	CD276 molecule	protein-coding
11.0333-3	chr3	23294395	23294536	+	0.166667	NA	intron (NM_001370225, intron 3 of 5)	intron (NM_001370225, intron 3 of 5)	91138	NM_152653	7325	Hs.475688	NM_152653	ENSG00000182247	UBE2E2	UBCH8	ubiquitin conjugating enzyme E2 E2	protein-coding
15.1667-2	chr10	114540729	114540885	+	0.166667	NA	intron (NM_001352440, intron 6 of 20)	intron (NM_001352440, intron 6 of 20)	-13894	NM_001322889	3983	Hs.438236	NM_002313	ENSG00000099204	ABLIM1	ABLIM|LIMAB1|LIMATIN|abLIM-1	actin binding LIM protein 1	protein-coding
21.8-17	chr8	83046816	83046968	+	0.166667	NA	Intergenic	Intergenic	134788	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
17.1667-12	chr5	13259580	13259694	+	0.166667	NA	Intergenic	Intergenic	-226751	NR_147005	105374658		NR_147005		LINC02220	-	long intergenic non-protein coding RNA 2220	ncRNA
25.9334	chr12	106267530	106267805	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	-19647	NM_006825	10970	Hs.74368	NM_006825	ENSG00000136026	CKAP4	CLIMP-63|ERGIC-63|p63	cytoskeleton associated protein 4	protein-coding
29.7-15	chr8	141949109	141949382	+	0.166667	NA	Intergenic	Intergenic	-162932	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA
35.4667-4	chr12	2664217	2664480	+	0.166667	NA	intron (NM_199460, intron 36 of 49).2	L1ME3C|LINE|L1	7872	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA
48.9333-2	chr6	62250126	62250682	+	0.166667	NA	intron (NR_146874, intron 1 of 13)	intron (NR_146874, intron 1 of 13)	35821	NR_146873	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
43.4333-5	chr7	110322611	110323246	+	0.166667	NA	Intergenic	Intergenic	-362715	NR_003024	442720	Hs.530096	NR_003024	ENSG00000237064	EIF3IP1	RG208K23	eukaryotic translation initiation factor 3 subunit I pseudogene 1	pseudo
30.4333-4	chr20	34533995	34534564	+	0.166667	NA	intron (NR_104032, intron 3 of 4)	intron (NR_104032, intron 3 of 4)	-12565	NM_181509	84557	Hs.632273	NM_032514	ENSG00000101460	MAP1LC3A	ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3	microtubule associated protein 1 light chain 3 alpha	protein-coding
16.9333-10	chr2	117364333	117364520	+	0.166667	NA	Intergenic	L1PB3|LINE|L1	-450265	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
13.8667-10	chr8	31720950	31721105	+	0.166667	NA	intron (NM_013962, intron 1 of 4)	intron (NM_013962, intron 1 of 4)	81275	NM_013962	3084	Hs.453951	NM_004495	ENSG00000157168	NRG1	ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF	neuregulin 1	protein-coding
35.6-9	chr3	2566312	2566759	+	0.166667	NA	intron (NM_175607, intron 3 of 24)	L2a|LINE|L2	-325680	NM_175613	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
42.2667-2	chr11	72023320	72023799	+	0.166667	NA	intron (NR_104476, intron 5 of 24)	intron (NR_104476, intron 5 of 24)	9268	NR_104178	100128494	Hs.713607	NR_104178	ENSG00000251143	LOC100128494	-	uncharacterized LOC100128494	ncRNA
31.6334-3	chr14	59573909	59574108	+	0.166667	NA	intron (NM_001164399, intron 2 of 19)	intron (NM_001164399, intron 2 of 19)	2804	NM_001164399	729665		NM_001164399	ENSG00000151838	CCDC175	C14orf38|c14_5395	coiled-coil domain containing 175	protein-coding
42.2666-4	chr4	186535738	186536129	+	0.166667	NA	intron (NM_005958, intron 1 of 1)	L2c|LINE|L2	19634	NM_005958	4543	Hs.243467	NM_005958	ENSG00000168412	MTNR1A	MEL-1A-R|MT1	melatonin receptor 1A	protein-coding
16.8-3	chr2	31251174	31251313	+	0.166667	NA	intron (NM_014600, intron 3 of 5)	intron (NM_014600, intron 3 of 5)	17091	NM_014600	30845	Hs.368808	NM_014600	ENSG00000013016	EHD3	PAST3	EH domain containing 3	protein-coding
18.5333-23	chr9	28748212	28748460	+	0.166667	NA	intron (NM_001354574, intron 2 of 5)	intron (NM_001354574, intron 2 of 5)	-29031	NM_152570	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
27.6334	chr11	67003004	67003169	+	0.166667	NA	Intergenic	MamGypLTR2c|LTR|Gypsy	-19707	NM_001177880	91683	Hs.287636	NM_177963	ENSG00000173227	SYT12	SYT11|sytXII	synaptotagmin 12	protein-coding
58.4001	chr15	64192259	64192813	+	0.166667	NA	intron (NM_001329605, intron 10 of 12)	intron (NM_001329605, intron 10 of 12)	-29381	NM_000942	5479	Hs.434937	NM_000942	ENSG00000166794	PPIB	B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP	peptidylprolyl isomerase B	protein-coding
23.9334	chr8	62007664	62007843	+	0.166667	NA	Intergenic	Intergenic	117914	NR_149085	111082988	Hs.521600	NR_149085	ENSG00000254120	LINC02155	-	long intergenic non-protein coding RNA 2155	ncRNA
30.7001	chr2	239475122	239475358	+	0.166667	NA	Intergenic	Intergenic	73492	NR_135577	101928111	Hs.534680	NR_135575	ENSG00000222020	HDAC4-AS1	-	HDAC4 antisense RNA 1	ncRNA
37.8333-3	chr15	82784966	82785483	+	0.166667	NA	intron (NM_001007122, intron 3 of 12)	intron (NM_001007122, intron 3 of 12)	20845	NM_001281806	123722	Hs.719372	NM_001007122	ENSG00000186628	FSD2	SPRYD1	fibronectin type III and SPRY domain containing 2	protein-coding
55.2668	chr2	207663094	207663587	+	0.166667	NA	intron (NR_135566, intron 1 of 3)	AluSq|SINE|Alu	910	NR_135567	102724714	Hs.443475	NR_135566	ENSG00000224137	LINC01857	-	long intergenic non-protein coding RNA 1857	ncRNA
49.2334	chr1	178071210	178071557	+	0.166667	NA	Intergenic	Intergenic	22610	NR_027982	100302401	Hs.736117	NR_027982	ENSG00000224687	RASAL2-AS1	-	RASAL2 antisense RNA 1	ncRNA
27.2667-6	chr14	74103055	74103373	+	0.166667	NA	intron (NM_001024674, intron 5 of 5)	AluSz|SINE|Alu	18261	NM_001024674	91750	Hs.612866	NM_001024674	ENSG00000205659	LIN52	C14orf46|c14_5549	lin-52 DREAM MuvB core complex component	protein-coding
27.0667-16	chr9	131098340	131098541	+	0.166667	NA	intron (NM_001185096, intron 2 of 5)	intron (NM_001185096, intron 2 of 5)	1909	NM_031426	83543	Hs.4944	NM_031426	ENSG00000126878	AIF1L	C9orf58|IBA2	allograft inflammatory factor 1 like	protein-coding
34.5667-2	chr1	244002842	244003152	+	0.166667	NA	intron (NR_033883, intron 2 of 11)	intron (NR_033883, intron 2 of 11)	-45942	NM_001278196	10472	Hs.69997	NM_006352	ENSG00000179456	ZBTB18	C2H2-171|MRD22|RP58|TAZ-1|ZNF238	zinc finger and BTB domain containing 18	protein-coding
28.8999	chr12	41405954	41406479	+	0.166667	NA	intron (NM_001164595, intron 3 of 9)	intron (NM_001164595, intron 3 of 9)	-31523	NM_013377	29951	Hs.380044	NM_013377	ENSG00000165966	PDZRN4	LNX4|SAMCAP3L	PDZ domain containing ring finger 4	protein-coding
52.4-4	chr3	188546639	188547236	+	0.166667	NA	intron (NM_001167672, intron 4 of 9)	L2c|LINE|L2	21729	NR_046623	100873917	Hs.674993	NR_046623	ENSG00000224563	LPP-AS1	-	LPP antisense RNA 1	ncRNA
31.2-8	chr14	40175537	40175954	+	0.166667	NA	Intergenic	AluSx3|SINE|Alu	-743245	NM_203301	254170	Hs.146632	NM_203301	ENSG00000165355	FBXO33	BMND12|Fbx33|c14_5247	F-box protein 33	protein-coding
65.5334	chr17	34994191	34995035	+	0.166667	NA	intron (NM_013975, intron 9 of 19)	intron (NM_013975, intron 9 of 19)	14101	NM_013975	3980	Hs.100299	NM_002311	ENSG00000005156	LIG3	LIG2|LIG3alpha	DNA ligase 3	protein-coding
44.1-2	chr4	19476925	19477333	+	0.166667	NA	Intergenic	Intergenic	-774776	NM_004787	9353	Hs.29802	NM_004787	ENSG00000145147	SLIT2	SLIL3|Slit-2	slit guidance ligand 2	protein-coding
45-3	chr12	44378705	44379136	+	0.166667	NA	intron (NM_001286213, intron 6 of 6)	intron (NM_001286213, intron 6 of 6)	496741	NM_001145109	4753	Hs.505326	NM_006159	ENSG00000184613	NELL2	NRP2	neural EGFL like 2	protein-coding
46.3334-2	chr5	143921219	143921562	+	0.166667	NA	Intergenic	Intergenic	109229	NM_021182	57824	Hs.158320	NM_021182	ENSG00000158497	HMHB1	HB-1|HB-1Y|HLA-HB1	histocompatibility minor HB-1	protein-coding
48.0667-2	chr2	9064008	9064454	+	0.166667	NA	Intergenic	L3|LINE|CR1	-60547	NR_135600	129642	Hs.467634	NM_138799	ENSG00000143797	MBOAT2	LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2	membrane bound O-acyltransferase domain containing 2	protein-coding
26-10	chr7	3170828	3171288	+	0.166667	NA	Intergenic	LTR33|LTR|ERVL	-12485	NR_126024	100129603	Hs.652997	NR_126024		LOC100129603	-	uncharacterized LOC100129603	ncRNA
44.1-4	chr5	171181526	171181988	+	0.166667	NA	intron (NM_022897, intron 16 of 27)	MIRb|SINE|MIR	-127491	NM_021025	30012	Hs.249125	NM_021025	ENSG00000164438	TLX3	HOX11L2|RNX	T cell leukemia homeobox 3	protein-coding
36.2666-2	chr14	69884888	69885230	+	0.166667	NA	intron (NM_001034852, intron 1 of 11)	L1MA8|LINE|L1	5643	NM_001034852	64093	Hs.497349	NM_022137	ENSG00000198732	SMOC1	OAS	SPARC related modular calcium binding 1	protein-coding
43.9334	chr7	38066667	38067361	+	0.166667	NA	Intergenic	Intergenic	-111231	NM_001363347	83930	Hs.309753	NM_032016	ENSG00000010270	STARD3NL	MENTHO	STARD3 N-terminal like	protein-coding
32.6667-8	chr8	16352317	16352599	+	0.166667	NA	Intergenic	L1MEg1|LINE|L1	-159667	NM_138716	4481	Hs.147635	NM_002445	ENSG00000038945	MSR1	CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2	macrophage scavenger receptor 1	protein-coding
26.6-6	chr12	90644775	90645054	+	0.166667	NA	Intergenic	Intergenic	-273109	NR_038868	439916	Hs.350600	NM_001039384	ENSG00000196243	LINC00615	C12orf37	long intergenic non-protein coding RNA 615	ncRNA
30.7667-13	chr8	86776545	86776837	+	0.166667	NA	Intergenic	Tigger4a|DNA|TcMar-Tigger	-33016	NM_019098	54714	Hs.154433	NM_019098	ENSG00000170289	CNGB3	ACHM1	cyclic nucleotide gated channel beta 3	protein-coding
15.3-4	chr2	209096107	209096198	+	0.166667	NA	Intergenic	L1PA13|LINE|L1	-327895	NM_001039538	4133	Hs.368281	NM_002374	ENSG00000078018	MAP2	MAP-2|MAP2A|MAP2B|MAP2C	microtubule associated protein 2	protein-coding
43.1667-2	chr3	17367240	17367680	+	0.166667	NA	intron (NM_014744, intron 13 of 21)	intron (NM_014744, intron 13 of 21)	332560	NM_001134381	9779	Hs.475629	NM_014744	ENSG00000131374	TBC1D5	-	TBC1 domain family member 5	protein-coding
29.4666-2	chr6	37123678	37123982	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	-46322	NM_002648	5292	Hs.81170	NM_002648	ENSG00000137193	PIM1	PIM	Pim-1 proto-oncogene, serine/threonine kinase	protein-coding
43.8	chr10	52522720	52523081	+	0.166667	NA	Intergenic	L2a|LINE|L2	-52367	NR_120641	101928687	Hs.380362	NR_120641	ENSG00000231131	LNCAROD	A-ROD|LINC01468|lnc-MBL2-4	lncRNA activating regulator of DKK1	ncRNA
64.4667-2	chr8	86661058	86661780	+	0.166667	NA	intron (NM_019098, intron 6 of 17)	intron (NM_019098, intron 6 of 17)	82256	NM_019098	54714	Hs.154433	NM_019098	ENSG00000170289	CNGB3	ACHM1	cyclic nucleotide gated channel beta 3	protein-coding
39.7334-4	chr9	95336066	95336389	+	0.166667	NA	Intergenic	Intergenic	-18518	NM_001243744	2176	Hs.494529	NM_000136	ENSG00000158169	FANCC	FA3|FAC|FACC	FA complementation group C	protein-coding
24.8333-4	chr5	6132763	6133017	+	0.166667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	204402	NR_028351	401172	Hs.376760	NM_001001702	ENSG00000250490	LINC02145	-	long intergenic non-protein coding RNA 2145	ncRNA
23.5-11	chr2	63473810	63474079	+	0.166667	NA	intron (NR_148704, intron 7 of 18)	MIR|SINE|MIR	-35937	NR_122106	51057	Hs.414952	NM_015910	ENSG00000143951	WDPCP	BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ	WD repeat containing planar cell polarity effector	protein-coding
31.6334-4	chr2	12331676	12332008	+	0.166667	NA	intron (NR_110196, intron 4 of 5)	L1MA1|LINE|L1	132712	NR_037452	100500884		NR_037452	ENSG00000264089	MIR3681	-	microRNA 3681	ncRNA
27.5333-14	chr6	169051188	169051546	+	0.166667	NA	Intergenic	L1MA9|LINE|L1	-15724	NR_134622	101929460	Hs.355225	NR_134622	ENSG00000229720	LOC101929460	-	uncharacterized LOC101929460	ncRNA
32.7334-2	chr8	74184777	74185061	+	0.166667	NA	Intergenic	Intergenic	136442	NM_001363051	56704	Hs.657367	NM_020647	ENSG00000104369	JPH1	CMT2K|JP-1|JP1	junctophilin 1	protein-coding
48.1667-3	chr8	117767324	117767737	+	0.166667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	153383	NR_145799	109623457		NR_145799		SNORD168	-	small nucleolar RNA, C/D box 168	snoRNA
53.8001	chr19	29125529	29125952	+	0.166667	NA	Intergenic	MER89|LTR|ERV1	87411	NM_006003	7386	Hs.743307	NM_006003	ENSG00000169021	UQCRFS1	RIP1|RIS1|RISP|UQCR5	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	protein-coding
28.6-12	chr2	121488310	121488593	+	0.166667	NA	intron (NM_015282, intron 8 of 38)	MIRb|SINE|MIR	-42429	NR_023343	100151683	Hs.689638	NR_023343	ENSG00000264229	RNU4ATAC	MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC	RNA, U4atac small nuclear (U12-dependent splicing)	snRNA
31.3667-7	chr3	57129384	57129652	+	0.166667	NA	intron (NM_001318864, intron 2 of 13)	intron (NM_001318864, intron 2 of 13)	35835	NM_017563	54756	Hs.150725	NM_017563	ENSG00000144730	IL17RD	HH18|IL-17RD|IL17RLM|SEF	interleukin 17 receptor D	protein-coding
32.9666-2	chr14	53389068	53389371	+	0.166667	NA	Intergenic	Intergenic	235865	NR_110062	101927620		NR_110062	ENSG00000258731	LOC101927620	-	uncharacterized LOC101927620	ncRNA
64.1	chr5	12861211	12862049	+	0.166667	NA	Intergenic	L2|LINE|L2	171256	NR_147005	105374658		NR_147005		LINC02220	-	long intergenic non-protein coding RNA 2220	ncRNA
58.1-2	chr8	88892889	88893373	+	0.166667	NA	Intergenic	Intergenic	-565648	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
21.0333-11	chr3	44117559	44117825	+	0.166667	NA	Intergenic	Intergenic	3480	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA
17.5334-2	chr6	72607955	72608112	+	0.166667	NA	Intergenic	MIR|SINE|MIR	-13810	NM_001160130	56479	Hs.445324	NM_019842	ENSG00000185760	KCNQ5	Kv7.5|MRD46	potassium voltage-gated channel subfamily Q member 5	protein-coding
47.6667-3	chr4	21815810	21816283	+	0.166667	NA	intron (NM_147182, intron 1 of 8)	intron (NM_147182, intron 1 of 8)	37142	NR_002813	359822	Hs.354058	NR_002813	ENSG00000280650	KCNIP4-IT1	NCRNA00099|UM9(5)|UM9-5	KCNIP4 intronic transcript 1	ncRNA
40.8667	chr12	99785764	99786180	+	0.166667	NA	intron (NM_152788, intron 4 of 25)	intron (NM_152788, intron 4 of 25)	138219	NM_153364	196472	Hs.591011	NM_153364	ENSG00000180219	FAM71C	-	family with sequence similarity 71 member C	protein-coding
38.4667	chr14	65089023	65089485	+	0.166667	NA	promoter-TSS (NR_045122)	promoter-TSS (NR_045122)	-664	NR_045122	100506321	Hs.711267	NR_045122	ENSG00000259118	LOC100506321	-	uncharacterized LOC100506321	ncRNA
33.1-3	chr3	148247016	148247434	+	0.166667	NA	Intergenic	Intergenic	-33666	NR_146712	105374149	Hs.274837	NR_146712		LINC02046	-	long intergenic non-protein coding RNA 2046	ncRNA
55.0334-2	chr8	113445846	113446488	+	0.166667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-9228	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
53.8332	chr5	120959487	120959975	+	0.166667	NA	Intergenic	L1MA4A|LINE|L1	-362819	NR_104999	102467226		NR_104999		LOC102467226	-	uncharacterized LOC102467226	ncRNA
14.6667-4	chr2	59158400	59158503	+	0.166667	NA	Intergenic	Intergenic	-59257	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
27.4334-4	chr4	32856345	32856579	+	0.166667	NA	Intergenic	L1MC3|LINE|L1	505424	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
31.4333-2	chr14	70016346	70016712	+	0.166667	NA	intron (NM_001034852, intron 10 of 11)	intron (NM_001034852, intron 10 of 11)	38396	NR_145786	109623479		NR_145786		SNORD169	-	small nucleolar RNA, C/D box 169	snoRNA
30.6-11	chr7	11056813	11057062	+	0.166667	NA	intron (NR_033436, intron 13 of 16)	intron (NR_033436, intron 13 of 16)	83065	NM_001007157	9678	Hs.655688	NM_014660	ENSG00000106443	PHF14	-	PHD finger protein 14	protein-coding
20.5333-15	chr7	159105593	159105977	+	0.166667	NA	intron (NR_130758, intron 3 of 12)	MIR3|SINE|MIR	-8581	NM_001308259	7434	Hs.585052	NM_003382	ENSG00000106018	VIPR2	C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R	vasoactive intestinal peptide receptor 2	protein-coding
62.5-2	chr8	6839609	6840175	+	0.166667	NA	intron (NR_045217, intron 2 of 2)	L1M5|LINE|L1	4338	NR_045217	100652791	Hs.369771	NR_045217	ENSG00000245857	GS1-24F4.2	-	uncharacterized LOC100652791	ncRNA
40.1001-2	chr2	66310499	66310891	+	0.166667	NA	Intergenic	Intergenic	47633	NR_039938	100616464		NR_039938	ENSG00000264525	MIR4778	-	microRNA 4778	ncRNA
25.5667-6	chr15	62114785	62115050	+	0.166667	NA	Intergenic	L3|LINE|CR1	47940	NM_207322	145741	Hs.202656	NM_207322	ENSG00000198535	C2CD4A	FAM148A|NLF1	C2 calcium dependent domain containing 4A	protein-coding
32.1334-4	chrX	129789737	129789986	+	0.166667	NA	intron (NM_018990, intron 3 of 7)	MER63D|DNA|hAT-Blackjack	9912	NM_018990	54440	Hs.61469	NM_018990	ENSG00000122122	SASH3	753P9|CXorf9|HACS2|SH3D6C|SLY	SAM and SH3 domain containing 3	protein-coding
73.1668	chr7	13157340	13157834	+	0.166667	NA	Intergenic	MamRTE1|LINE|RTE-BovB	469954	NM_005738	10124	Hs.245540	NM_005738	ENSG00000122644	ARL4A	ARL4	ADP ribosylation factor like GTPase 4A	protein-coding
21.7333-11	chr6	33859011	33859232	+	0.166667	NA	Intergenic	MIR|SINE|MIR	37786	NR_038989	100507584	Hs.547104	NR_038989	ENSG00000249346	LINC01016	-	long intergenic non-protein coding RNA 1016	ncRNA
32-11	chr7	91081500	91081781	+	0.166667	NA	intron (NM_012395, intron 11 of 13)	intron (NM_012395, intron 11 of 13)	-182793	NM_003505	8321	Hs.94234	NM_003505	ENSG00000157240	FZD1	-	frizzled class receptor 1	protein-coding
27.7666-3	chr1	228792450	228792855	+	0.166667	NA	Intergenic	Intergenic	57173	NM_021205	58480	Hs.647774	NM_021205	ENSG00000116574	RHOU	ARHU|CDC42L1|G28K|WRCH1|hG28K	ras homolog family member U	protein-coding
14.9333-16	chr5	22657344	22657497	+	0.166667	NA	intron (NM_004061, intron 1 of 14)	intron (NM_004061, intron 1 of 14)	195924	NM_001364106	1010	Hs.113684	NM_004061	ENSG00000154162	CDH12	CDHB	cadherin 12	protein-coding
35.8334-3	chrX	103297895	103298115	+	0.166667	NA	Intergenic	MER66B|LTR|ERV1	12950	NM_001168399	84707	Hs.398989	NM_032621	ENSG00000133134	BEX2	BEX1|DJ79P11.1	brain expressed X-linked 2	protein-coding
53.6668	chr14	43029722	43030098	+	0.166667	NA	Intergenic	Intergenic	1423054	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
26.1667-5	chr4	56304570	56304852	+	0.166667	NA	intron (NM_020722, intron 4 of 10)	AluJr|SINE|Alu	82780	NM_181806	132949	Hs.104347	NM_181806	ENSG00000157426	AASDH	ACSF4|LYS2|NRPS1098|NRPS998	aminoadipate-semialdehyde dehydrogenase	protein-coding
27.4667-10	chr5	6407890	6408089	+	0.166667	NA	Intergenic	Intergenic	-29442	NM_032286	84246	Hs.13885	NM_032286	ENSG00000133398	MED10	L6|NUT2|TRG20	mediator complex subunit 10	protein-coding
32.3333	chr10	89443944	89444159	+	0.166667	NA	intron (NM_213606, intron 3 of 7)	intron (NM_213606, intron 3 of 7)	-11940	NR_120614	101926906	Hs.568874	NR_120614	ENSG00000234452	SLC16A12-AS1	-	SLC16A12 antisense RNA 1	ncRNA
63.4334	chr1	85391552	85392097	+	0.166667	NA	intron (NM_001134445, intron 2 of 6)	intron (NM_001134445, intron 2 of 6)	12682	NM_001330655	23576	Hs.713411	NM_012137	ENSG00000153904	DDAH1	DDAH|DDAH-1|DDAHI|HEL-S-16	dimethylarginine dimethylaminohydrolase 1	protein-coding
23.8667-6	chr21	35053035	35053210	+	0.166667	NA	Intergenic	MER5A1|DNA|hAT-Charlie	-3824	NM_001754	861	Hs.149261	NM_001754	ENSG00000159216	RUNX1	AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha	RUNX family transcription factor 1	protein-coding
60.8001	chr18	55348059	55348568	+	0.166667	NA	intron (NM_001243228, intron 8 of 19)	intron (NM_001243228, intron 8 of 19)	-26472	NM_001243234	6925	Hs.605153	NM_003199	ENSG00000196628	TCF4	E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19	transcription factor 4	protein-coding
66.8334-3	chr4	111878399	111878811	+	0.166667	NA	Intergenic	Intergenic	-266849	NM_152400	132720	Hs.23439	NM_152400	ENSG00000174749	FAM241A	C4orf32	family with sequence similarity 241 member A	protein-coding
27.7-6	chr18	45122422	45122682	+	0.166667	NA	Intergenic	L2a|LINE|L2	-45411	NM_001371319								
25.8-17	chr2	211215948	211216189	+	0.166667	NA	Intergenic	Intergenic	598497	NR_002763	29034	Hs.658398	NR_002763	ENSG00000280837	CPS1-IT1	CPS1-IT|CPS1IT|CPS1IT1|PRO0132	CPS1 intronic transcript 1	ncRNA
40.4667-3	chr8	127980926	127981240	+	0.166667	NA	intron (NR_003367, intron 3 of 8)	AluSx1|SINE|Alu	20450	NR_031610	100302161		NR_031610	ENSG00000221771	MIR1205	MIRN1205|hsa-mir-1205	microRNA 1205	ncRNA
18.7333-10	chr17	72386082	72386271	+	0.166667	NA	Intergenic	Intergenic	43365	NR_135222	146795	Hs.651743	NR_135222	ENSG00000264026	LINC02003	-	long intergenic non-protein coding RNA 2003	ncRNA
26.9667-5	chr5	36485324	36485932	+	0.166667	NA	Intergenic	AluJr4|SINE|Alu	-120727	NM_001289939	6507	Hs.481918	NM_004172	ENSG00000079215	SLC1A3	EA6|EAAT1|GLAST|GLAST1	solute carrier family 1 member 3	protein-coding
25.0334	chr15	46556014	46556224	+	0.166667	NA	Intergenic	Intergenic	-627970	NM_001198999	80031	Hs.511265	NM_020858	ENSG00000137872	SEMA6D	-	semaphorin 6D	protein-coding
18.5334	chr10	58257766	58257928	+	0.166667	NA	intron (NM_152230, intron 1 of 5)	L1MC4|LINE|L1	10047	NM_152230	253430	Hs.30280	NM_152230	ENSG00000151151	IPMK	-	inositol polyphosphate multikinase	protein-coding
64.0668	chr2	31315646	31316315	+	0.166667	NA	Intergenic	MER3|DNA|hAT-Charlie	81828	NM_014600	30845	Hs.368808	NM_014600	ENSG00000013016	EHD3	PAST3	EH domain containing 3	protein-coding
48.4667-2	chr5	163161054	163161427	+	0.166667	NA	Intergenic	Intergenic	-276331	NM_001364019	900	Hs.79101	NM_004060	ENSG00000113328	CCNG1	CCNG	cyclin G1	protein-coding
28.7333-10	chr20	24780842	24781387	+	0.166667	NA	Intergenic	Intergenic	-168155	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding
48.2667	chr17	53409117	53409593	+	0.166667	NA	Intergenic	Intergenic	-413572	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
37.8334	chr2	227360329	227360676	+	0.166667	NA	Intergenic	Tigger4|DNA|TcMar-Tigger	18804	NM_024795	79853	Hs.156652	NM_024795	ENSG00000168955	TM4SF20	PRO994|SLI5|TCCE518	transmembrane 4 L six family member 20	protein-coding
30.1334-2	chr5	154432147	154432490	+	0.166667	NA	intron (NR_037897, intron 2 of 2)	MLT1A0|LTR|ERVL-MaLR	13504	NR_037897	386627	Hs.652021	NR_037897		SAP30L-AS1	GALNT10-AS1	SAP30L antisense RNA 1 (head to head)	ncRNA
56.7668	chr5	33415684	33416026	+	0.166667	NA	Intergenic	MER44B|DNA|TcMar-Tigger	-24841	NM_001258437	6897	Hs.481860	NM_152295	ENSG00000113407	TARS	ThrRS	threonyl-tRNA synthetase	protein-coding
38.2333-4	chr3	66057830	66058139	+	0.166667	NA	Intergenic	L1ME4b|LINE|L1	-19066	NM_001033057	9223	Hs.476636	NM_004742	ENSG00000151276	MAGI1	AIP-3|AIP3|BAIAP1|BAP-1|BAP1|MAGI-1|MAGI-1b|Magi1d|TNRC19|WWP3	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
68.6999	chr4	74986926	74987669	+	0.166667	NA	intron (NM_015393, intron 1 of 3)	MLT1O|LTR|ERVL-MaLR	-16935	NR_121617	100507388	Hs.570765	NR_121617	ENSG00000249717	LOC100507388	-	uncharacterized LOC100507388	ncRNA
35.3333	chr1	200226772	200227118	+	0.166667	NA	Intergenic	L2c|LINE|L2	146847	NR_040064	554279	Hs.434694	NR_040064	ENSG00000203721	LINC00862	C1orf98|SMIM16	long intergenic non-protein coding RNA 862	ncRNA
21.1667-12	chr9	30777857	30778057	+	0.166667	NA	Intergenic	L1MA9|LINE|L1	-369503	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
14.6333-11	chr4	39690367	39690499	+	0.166667	NA	Intergenic	Intergenic	-7703	NM_001312648	3093	Hs.50308	NM_005339	ENSG00000078140	UBE2K	E2-25K|HIP2|HYPG|LIG|UBC1	ubiquitin conjugating enzyme E2 K	protein-coding
20.1-7	chr5	24972403	24972745	+	0.166667	NA	Intergenic	Intergenic	-131991	NR_037896	340107	Hs.145181	NR_037896	ENSG00000248908	LINC02239	-	long intergenic non-protein coding RNA 2239	ncRNA
41.9334-2	chr10	116909004	116909317	+	0.166667	NA	intron (NM_001127211, intron 14 of 16)	MIR3|SINE|MIR	-59438	NM_001330164	259217	Hs.648448	NM_025015	ENSG00000165868	HSPA12A	-	heat shock protein family A (Hsp70) member 12A	protein-coding
22.1333-16	chr8	85019826	85019980	+	0.166667	NA	Intergenic	Intergenic	-87335	NM_001349639	85444	Hs.193115	NM_033402	ENSG00000133739	LRRCC1	CLERC|CLERK|SAP2|VFL1	leucine rich repeat and coiled-coil centrosomal protein 1	protein-coding
13.0667-8	chr5	19593715	19593793	+	0.166667	NA	intron (NM_001349559, intron 6 of 12)	(CTT)n|Simple_repeat|Simple_repeat	292518	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
12.6334	chr2	169931761	169931836	+	0.166667	NA	intron (NM_172070, intron 18 of 38)	MER113A|DNA|hAT-Charlie	104290	NM_172070	130507	Hs.379548	NM_172070	ENSG00000144357	UBR3	ZNF650	ubiquitin protein ligase E3 component n-recognin 3	protein-coding
67.5333	chr19	7713165	7713924	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	-11398	NM_002002	2208	Hs.465778	NM_002002	ENSG00000104921	FCER2	BLAST-2|CD23|CD23A|CLEC4J|FCE2|IGEBF	Fc fragment of IgE receptor II	protein-coding
31.4333-7	chr8	126530546	126530871	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	27770	NR_156466	157638	Hs.124951	NM_174911	ENSG00000168672	LRATD2	BCMP101|FAM84B|NSE2	LRAT domain containing 2	protein-coding
38.9667-5	chr3	125507359	125507758	+	0.166667	NA	intron (NM_003794, intron 1 of 13)	L1MB2|LINE|L1	12644	NR_073435	8723	Hs.507243	NM_003794	ENSG00000114520	SNX4	ATG24B	sorting nexin 4	protein-coding
49.0334-3	chr16	66071727	66072215	+	0.166667	NA	Intergenic	Intergenic	-294720	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding
28.4667-2	chr11	34441315	34441615	+	0.166667	NA	intron (NM_001752, intron 1 of 12)	L1ME2z|LINE|L1	2531	NM_001752	847	Hs.502302	NM_001752	ENSG00000121691	CAT	-	catalase	protein-coding
37.8-6	chr20	17026501	17026809	+	0.166667	NA	Intergenic	Intergenic	-199452	NM_001201528	5126	Hs.315186	NM_002594	ENSG00000125851	PCSK2	NEC 2|NEC-2|NEC2|PC2|SPC2	proprotein convertase subtilisin/kexin type 2	protein-coding
48.7	chr11	74875164	74875690	+	0.166667	NA	intron (NM_001270381, intron 8 of 15)	HUERS-P3-int|LTR|ERV1	73664	NM_182969	143570	Hs.370145	NM_182969	ENSG00000166435	XRRA1	-	X-ray radiation resistance associated 1	protein-coding
25.0334-2	chr3	3934481	3934770	+	0.166667	NA	Intergenic	L1MCa|LINE|L1	-133750	NR_149025	100130207	Hs.587205	NR_149025	ENSG00000144455	LOC100130207	-	uncharacterized LOC100130207	ncRNA
38.4334	chr5	52141569	52142109	+	0.166667	NA	Intergenic	Intergenic	133808	NR_147166	105378960	Hs.639310	NR_147166	ENSG00000248789	LINC02118	-	long intergenic non-protein coding RNA 2118	ncRNA
52.8333	chr5	117676074	117676707	+	0.166667	NA	Intergenic	Intergenic	-53971	NR_104997	102467224	Hs.134230	NR_104997		LINC02147	-	long intergenic non-protein coding RNA 2147	ncRNA
31.9334	chr1	154585893	154586178	+	0.166667	NA	intron (NM_001111, intron 12 of 14)	intron (NM_001111, intron 12 of 14)	18257	NM_000748	1141	Hs.2306	NM_000748	ENSG00000160716	CHRNB2	EFNL3|nAChRB2	cholinergic receptor nicotinic beta 2 subunit	protein-coding
44.9666-2	chr2	69889204	69889719	+	0.166667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-4495	NM_006857	11017	Hs.54649	NM_006857	ENSG00000124380	SNRNP27	27K|RY1	small nuclear ribonucleoprotein U4/U6.U5 subunit 27	protein-coding
25.5-5	chr5	105430135	105430543	+	0.166667	NA	Intergenic	Intergenic	330865	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
51.7333	chr1	88174183	88174813	+	0.166667	NA	Intergenic	Charlie7|DNA|hAT-Charlie	-509646	NM_001320707	5586	Hs.440833	NM_006256	ENSG00000065243	PKN2	PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7	protein kinase N2	protein-coding
54.7334-2	chr3	103015450	103015843	+	0.166667	NA	Intergenic	Intergenic	508470	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
50.9001-2	chr9	29770114	29770548	+	0.166667	NA	Intergenic	Intergenic	-556730	NM_001258282	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
29.2667-6	chr2	37826215	37826572	+	0.166667	NA	non-coding (NR_110011, exon 3 of 3)	non-coding (NR_110011, exon 3 of 3)	3318	NR_110011	101929559	Hs.468200	NR_110011	ENSG00000237803	LINC00211	NCRNA00211	long intergenic non-protein coding RNA 211	ncRNA
29.9-3	chr18	47396462	47396717	+	0.166667	NA	intron (NR_147192, intron 1 of 2)	intron (NR_147192, intron 1 of 2)	16093	NR_039753	100616264		NR_039753	ENSG00000266582	MIR4527	-	microRNA 4527	ncRNA
45.5001	chr6	140450507	140450923	+	0.166667	NA	Intergenic	L1MD1|LINE|L1	-233099	NR_039675	100616180		NR_039675	ENSG00000264390	MIR4465	-	microRNA 4465	ncRNA
36.9-6	chr7	32581208	32581790	+	0.166667	NA	intron (NR_036680, intron 16 of 16)	L1M5|LINE|L1	86010	NM_015060	23080	Hs.128056	NM_015060	ENSG00000105778	AVL9	KIAA0241	AVL9 cell migration associated	protein-coding
29.2667-10	chr4	75518254	75518470	+	0.166667	NA	intron (NR_133920, intron 2 of 4)	L1ME4a|LINE|L1	3889	NM_144721	152815	Hs.479971	NM_144721	ENSG00000174796	THAP6	-	THAP domain containing 6	protein-coding
26.5333-15	chr9	31542215	31542497	+	0.166667	NA	Intergenic	Intergenic	-160866	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
31-2	chr15	71956702	71957058	+	0.166667	NA	intron (NM_006901, intron 14 of 41)	(TA)n|Simple_repeat|Simple_repeat	146326	NM_016346	10002	Hs.187354	NM_014249	ENSG00000278570	NR2E3	ESCS|PNR|RNR|RP37|rd7	nuclear receptor subfamily 2 group E member 3	protein-coding
29.1667-15	chr8	50850368	50850593	+	0.166667	NA	Intergenic	L1MA4|LINE|L1	686349	NM_001321778	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
19.5667-13	chrX	39409289	39409441	+	0.166667	NA	Intergenic	MamRep605|LTR?|LTR?	-17591	NR_110385	101927449	Hs.553988	NR_110385	ENSG00000236747	LINC01282	-	long intergenic non-protein coding RNA 1282	ncRNA
35.6333	chr2	52215149	52215533	+	0.166667	NA	intron (NR_135237, intron 7 of 10)	intron (NR_135237, intron 7 of 10)	-155307	NR_135239	105374596		NR_135239	ENSG00000225444	LINC01867	-	long intergenic non-protein coding RNA 1867	ncRNA
27.5334-2	chr3	94364655	94364902	+	0.166667	NA	Intergenic	Intergenic	301717	NM_022072	63899	Hs.436594	NM_022072	ENSG00000178694	NSUN3	MST077|MSTP077	NOP2/Sun RNA methyltransferase 3	protein-coding
54.7001-3	chr9	84685535	84685928	+	0.166667	NA	intron (NM_001369550, intron 1 of 11)	L2c|LINE|L2	13640	NM_001369535	4915	Hs.494312	NM_006180	ENSG00000148053	NTRK2	EIEE58|GP145-TrkB|OBHD|TRKB|trk-B	neurotrophic receptor tyrosine kinase 2	protein-coding
38-3	chr2	115619171	115619561	+	0.166667	NA	intron (NM_001321912, intron 6 of 25)	AluSc8|SINE|Alu	275551	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
49.9-4	chr8	88101438	88101842	+	0.166667	NA	intron (NM_005941, intron 6 of 9)	intron (NM_005941, intron 6 of 9)	225843	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
38-8	chr6	140602969	140603292	+	0.166667	NA	Intergenic	Intergenic	-80684	NR_039675	100616180		NR_039675	ENSG00000264390	MIR4465	-	microRNA 4465	ncRNA
31.2-15	chr3	171220441	171220795	+	0.166667	NA	intron (NM_001161563, intron 3 of 31)	intron (NM_001161563, intron 3 of 31)	-113859	NR_030295	693154		NR_030295	ENSG00000207963	MIR569	MIRN569|hsa-mir-569	microRNA 569	ncRNA
31.3333-11	chr7	62854692	62855369	+	0.166667	NA	Intergenic	ALR/Alpha|Satellite|centr	449026	NR_003952	643955	Hs.583308	NR_003952	ENSG00000185037	ZNF733P	ZNF733	zinc finger protein 733, pseudogene	pseudo
29.8667	chr2	75900446	75900825	+	0.166667	NA	Intergenic	AluYa5|SINE|Alu	-189720	NM_001201335	6936	Hs.303808	NM_003203	ENSG00000005436	GCFC2	C2orf3|DNABF|GCF|TCF9	GC-rich sequence DNA-binding factor 2	protein-coding
29.9-2	chr17	71430526	71430842	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	-228505	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility 17	ncRNA
14.2-6	chr8	17355732	17355824	+	0.166667	NA	intron (NM_004686, intron 4 of 13)	L1ME3E|LINE|L1	57573	NM_004686	9108	Hs.625674	NM_004686	ENSG00000003987	MTMR7	-	myotubularin related protein 7	protein-coding
38.6001-2	chr22	19709440	19709685	+	0.166667	NA	Intergenic	Intergenic	-4941	NM_002688	5413	Hs.728762	NM_002688	ENSG00000184702	SEPTIN5	CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5	septin 5	protein-coding
43.8332	chr22	23228667	23229267	+	0.166667	NA	intron (NM_004327, intron 1 of 22)	L1MEf|LINE|L1	-33800	NR_033408	26226	Hs.729589	NR_033408	ENSG00000230701	FBXW4P1	FBW3|FBXW3|SHFM3P1	F-box and WD repeat domain containing 4 pseudogene 1	pseudo
20.9	chr11	7984900	7985066	+	0.166667	NA	Intergenic	Intergenic	-2354	NM_003754	8665	Hs.516023	NM_003754	ENSG00000175390	EIF3F	EIF3S5|MRT67|eIF3-p47	eukaryotic translation initiation factor 3 subunit F	protein-coding
19.7-5	chr14	27060640	27060855	+	0.166667	NA	Intergenic	L1MEg2|LINE|L1	152105	NR_036193	100423019		NR_036193	ENSG00000265165	MIR4307	-	microRNA 4307	ncRNA
46.8667	chr10	62589926	62590431	+	0.166667	NA	intron (NM_199452, intron 1 of 6)	intron (NM_199452, intron 1 of 6)	69730	NM_199452	22891	Hs.22653	NM_014951	ENSG00000138311	ZNF365	Su48|UAN|ZNF365D	zinc finger protein 365	protein-coding
26.7-10	chr5	57205008	57205247	+	0.166667	NA	intron (NM_001331037, intron 2 of 12)	L1MB5|LINE|L1	-8947	NM_001127236	65056	Hs.444279	NM_022913	ENSG00000062194	GPBP1	GPBP|SSH6|VASCULIN	GC-rich promoter binding protein 1	protein-coding
36.7333-7	chr6	97182576	97182824	+	0.166667	NA	intron (NM_001350600, intron 14 of 23)	L2a|LINE|L2	100516	NM_198468	253714	Hs.444292	NM_198468	ENSG00000146263	MMS22L	C6orf167|dJ39B17.2	MMS22 like, DNA repair protein	protein-coding
32.2667-3	chr17	70271018	70271344	+	0.166667	NA	Intergenic	Intergenic	101646	NM_000891	3759	Hs.1547	NM_000891	ENSG00000123700	KCNJ2	ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3	potassium voltage-gated channel subfamily J member 2	protein-coding
49.3667	chr1	49098809	49099238	+	0.166667	NA	intron (NM_001323575, intron 4 of 12)	intron (NM_001323575, intron 4 of 12)	-158388	NR_125988	101929721	Hs.639985	NR_125988	ENSG00000230114	LOC101929721	-	uncharacterized LOC101929721	ncRNA
33.2333-9	chr8	139626272	139626613	+	0.166667	NA	intron (NR_104210, intron 1 of 3)	intron (NR_104210, intron 1 of 3)	76681	NM_001282534	51305	Hs.493037	NM_001282534	ENSG00000169427	KCNK9	K2p9.1|KT3.2|TASK-3|TASK3	potassium two pore domain channel subfamily K member 9	protein-coding
36.7667-8	chr8	113664428	113664761	+	0.166667	NA	Intergenic	LTR77|LTR|ERV1	-227655	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
48.9334-2	chr3	113269975	113270469	+	0.166667	NA	intron (NM_001301861, intron 5 of 19)	intron (NM_001301861, intron 5 of 19)	58106	NM_001301861	91653	Hs.591318	NM_033254	ENSG00000144857	BOC	CDON2	BOC cell adhesion associated, oncogene regulated	protein-coding
23.3666-2	chr18	58812257	58812520	+	0.166667	NA	Intergenic	AluSx|SINE|Alu	-1492	NR_146904	105372147	Hs.210837	NR_146904	ENSG00000267593	LINC01926	-	long intergenic non-protein coding RNA 1926	ncRNA
33.5334-3	chr6	116585803	116586132	+	0.166667	NA	intron (NM_015952, intron 3 of 6)	intron (NM_015952, intron 3 of 6)	14463	NM_016104	51389	Hs.532164	NM_015952	ENSG00000111832	RWDD1	CGI-24|PTD013	RWD domain containing 1	protein-coding
34.6666	chr11	63182900	63183515	+	0.166667	NA	intron (NM_199352, intron 5 of 8)	L2a|LINE|L2	-38986	NM_173586	283238	Hs.375139	NM_173586	ENSG00000197658	SLC22A24	NET46	solute carrier family 22 member 24	protein-coding
48.4334	chr14	47094001	47094532	+	0.166667	NA	intron (NM_001113498, intron 6 of 16)	intron (NM_001113498, intron 6 of 16)	248980	NM_182830	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
54.9666	chr1	109144321	109144832	+	0.166667	NA	intron (NM_001284352, intron 1 of 20)	AluSq|SINE|Alu	30461	NM_001284352	57535	Hs.708190	NM_020775	ENSG00000116299	KIAA1324	EIG121	KIAA1324	protein-coding
58.7332	chr11	82172284	82172705	+	0.166667	NA	intron (NR_120571, intron 3 of 7)	intron (NR_120571, intron 3 of 7)	231419	NR_120571	101928989	Hs.145117	NR_120571	ENSG00000245832	MIR4300HG	-	MIR4300 host gene	ncRNA
40.5334-2	chr22	39919669	39919968	+	0.166667	NA	intron (NM_004810, intron 1 of 7)	intron (NM_004810, intron 1 of 7)	-6786	NM_001291824	9402	Hs.517499	NM_004810	ENSG00000100351	GRAP2	GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38	GRB2 related adaptor protein 2	protein-coding
57.3334	chr3	147914850	147915289	+	0.166667	NA	Intergenic	L2|LINE|L2	-163090	NR_134937	100507461	Hs.112623	NR_134937	ENSG00000241131	LINC02032	-	long intergenic non-protein coding RNA 2032	ncRNA
32.4667-2	chr10	75223423	75223730	+	0.166667	NA	intron (NM_001324090, intron 10 of 11)	intron (NM_001324090, intron 10 of 11)	12381	NM_144589	118881	Hs.355333	NM_144589	ENSG00000165644	COMTD1	-	catechol-O-methyltransferase domain containing 1	protein-coding
40.1001	chr11	110559524	110559787	+	0.166667	NA	Intergenic	L1MD2|LINE|L1	129707	NM_004109	2230	Hs.744	NM_004109	ENSG00000137714	FDX1	ADX|FDX|LOH11CR1D	ferredoxin 1	protein-coding
26.9333-10	chr2	105732528	105732851	+	0.166667	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	-12223	NM_003581	8440	Hs.529244	NM_003581	ENSG00000071051	NCK2	GRB4|NCKbeta	NCK adaptor protein 2	protein-coding
46.1334	chr10	106683194	106683682	+	0.166667	NA	intron (NM_001206569, intron 10 of 25)	L1MA7|LINE|L1	481268	NM_001206571	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
36.7666-3	chr4	127349470	127349965	+	0.166667	NA	Intergenic	L1PA14|LINE|L1	-283240	NM_015693	27152	Hs.391481	NM_015693	ENSG00000164066	INTU	CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20	inturned planar cell polarity protein	protein-coding
47.9666	chr14	98505595	98505941	+	0.166667	NA	Intergenic	Intergenic	-205845	NR_161368	283598	Hs.448754	NM_182560	ENSG00000176605	C14orf177	-	chromosome 14 open reading frame 177	ncRNA
68.6	chr3	10934163	10934944	+	0.166667	NA	intron (NM_014229, intron 12 of 13)	intron (NM_014229, intron 12 of 13)	-58181	NM_001348250	6529	Hs.443874	NM_003042	ENSG00000157103	SLC6A1	GABATHG|GABATR|GAT1|MAE	solute carrier family 6 member 1	protein-coding
26.8-19	chr8	34074691	34074924	+	0.166667	NA	Intergenic	Intergenic	-474701	NM_001305115	78986	Hs.8719	NM_024025	ENSG00000133878	DUSP26	DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3	dual specificity phosphatase 26	protein-coding
40.5-9	chr4	26569315	26569737	+	0.166667	NA	Intergenic	AluY|SINE|Alu	-14398	NM_001292054	55296	Hs.479403	NM_018317	ENSG00000109680	TBC1D19	-	TBC1 domain family member 19	protein-coding
35.5667-5	chrX	38921276	38921591	+	0.166667	NA	Intergenic	MIR3|SINE|MIR	-117550	NR_046706	100874211	Hs.662789	NR_046706		MID1IP1-AS1	-	MID1IP1 antisense RNA 1	ncRNA
22.8667-3	chr5	7023702	7023873	+	0.166667	NA	Intergenic	L1MA9|LINE|L1	-195866	NR_036242	100422999		NR_036242	ENSG00000283420	MIR4278	-	microRNA 4278	ncRNA
55.0334	chr16	35253843	35254285	+	0.166667	NA	Intergenic	L1PB4|LINE|L1	58305	NR_157262	112268173	Hs.369226	NR_157261		LOC112268173	-	uncharacterized LOC112268173	ncRNA
24.3-4	chr15	50194563	50194791	+	0.166667	NA	intron (NM_001159629, intron 1 of 8)	L2c|LINE|L2	12481	NM_003645	11001	Hs.11729	NM_003645	ENSG00000140284	SLC27A2	ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1	solute carrier family 27 member 2	protein-coding
36.7334	chr6	20068550	20068962	+	0.166667	NA	Intergenic	Intergenic	143713	NM_001080480	154141	Hs.377830	NM_001080480	ENSG00000172197	MBOAT1	LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1	membrane bound O-acyltransferase domain containing 1	protein-coding
56.0001	chr5	23012728	23013155	+	0.166667	NA	Intergenic	Intergenic	-159597	NM_001364104	1010	Hs.113684	NM_004061	ENSG00000154162	CDH12	CDHB	cadherin 12	protein-coding
38.5-2	chr11	27057399	27057654	+	0.166667	NA	intron (NM_003986, intron 4 of 8)	intron (NM_003986, intron 4 of 8)	16711	NM_003986	8424	Hs.591996	NM_003986	ENSG00000129151	BBOX1	BBH|BBOX|G-BBH|gamma-BBH	gamma-butyrobetaine hydroxylase 1	protein-coding
29.7-4	chr10	122281438	122282008	+	0.166667	NA	intron (NM_001318189, intron 3 of 15)	intron (NM_001318189, intron 3 of 15)	10427	NM_001318189	118663	Hs.422466	NM_144587	ENSG00000138152	BTBD16	C10orf87	BTB domain containing 16	protein-coding
30.1334-3	chr7	42104245	42104616	+	0.166667	NA	intron (NM_000168, intron 3 of 14)	L2c|LINE|L2	132779	NM_000168	2737	Hs.21509	NM_000168	ENSG00000106571	GLI3	ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV	GLI family zinc finger 3	protein-coding
32.1667-9	chr5	130391116	130391524	+	0.166667	NA	Intergenic	Intergenic	486855	NM_175856	337876	Hs.213137	NM_175856	ENSG00000198108	CHSY3	CHSY2|CSS3	chondroitin sulfate synthase 3	protein-coding
15.4-21	chr6	89149645	89149847	+	0.166667	NA	intron (NM_001010853, intron 2 of 6)	intron (NM_001010853, intron 2 of 6)	3691	NM_001010853	135293	Hs.356247	NM_001010853	ENSG00000146281	PM20D2	ACY1L2	peptidase M20 domain containing 2	protein-coding
36.2-3	chr10	101125119	101125464	+	0.166667	NA	intron (NR_130724, intron 2 of 2)	intron (NR_130724, intron 2 of 2)	5855	NR_130723	100038246	Hs.368784	NM_001085398	ENSG00000236311	TLX1NB	APT-B7|TD1|TDI	TLX1 neighbor	ncRNA
22.2667-4	chr19	50318365	50318498	+	0.166667	NA	intron (NR_110912, intron 2 of 3)	AluSx1|SINE|Alu	10946	NM_004977	3748	Hs.467146	NM_004977	ENSG00000131398	KCNC3	KSHIIID|KV3.3|SCA13	potassium voltage-gated channel subfamily C member 3	protein-coding
26.3667-6	chr20	12077455	12077788	+	0.166667	NA	Intergenic	Intergenic	159728	NM_014962	22903	Hs.709366	NM_014962	ENSG00000132640	BTBD3	dJ742J24.1	BTB domain containing 3	protein-coding
25.0667-7	chr3	124531898	124532110	+	0.166667	NA	intron (NM_001024660, intron 33 of 59)	intron (NM_001024660, intron 33 of 59)	-52654	NM_001322995	8997	Hs.8004	NM_003947	ENSG00000160145	KALRN	ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD	kalirin RhoGEF kinase	protein-coding
38.5999	chr10	73475556	73476109	+	0.166667	NA	intron (NM_001142353, intron 3 of 13)	intron (NM_001142353, intron 3 of 13)	-19920	NR_132103	101929145	Hs.434502	NR_132103	ENSG00000221817	PPP3CB-AS1	USP54-AS1	PPP3CB antisense RNA 1 (head to head)	ncRNA
16.6333-9	chr5	104695797	104695999	+	0.166667	NA	Intergenic	Intergenic	-403576	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
22.0334	chr1	74685598	74685821	+	0.166667	NA	Intergenic	Intergenic	-11917	NM_001002912	127254	Hs.531182	NM_001002912	ENSG00000178965	ERICH3	C1orf173	glutamate rich 3	protein-coding
69.0667	chr20	34859250	34859840	+	0.166667	NA	exon (NM_001351702, exon 7 of 15)	exon (NM_001351702, exon 7 of 15)	13311	NM_178026	2686	Hs.433738	NM_178026	ENSG00000131067	GGT7	D20S101|GGT4|GGTL3|GGTL5	gamma-glutamyltransferase 7	protein-coding
64.7334	chr8	33024270	33024956	+	0.166667	NA	Intergenic	L1MD1|LINE|L1	302778	NM_001322197	3084	Hs.453951	NM_004495	ENSG00000157168	NRG1	ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF	neuregulin 1	protein-coding
33.6666-5	chr7	71740426	71740912	+	0.166667	NA	Intergenic	Intergenic	-432899	NR_037477	100500836		NR_037477	ENSG00000265878	MIR3914-1	-	microRNA 3914-1	ncRNA
22.3667	chr1	54327456	54327698	+	0.166667	NA	intron (NM_001009955, intron 4 of 16)	(TTTC)n|Simple_repeat|Simple_repeat	78817	NM_018070	23648	Hs.476706	NM_018070	ENSG00000157216	SSBP3	CSDP|SSDP|SSDP1	single stranded DNA binding protein 3	protein-coding
29.3-3	chr10	34511838	34512038	+	0.166667	NA	intron (NM_001184789, intron 3 of 22)	intron (NM_001184789, intron 3 of 22)	303358	NM_001184794	56288	Hs.131489	NM_019619	ENSG00000148498	PARD3	ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2	par-3 family cell polarity regulator	protein-coding
54.3668-2	chr18	5539601	5539983	+	0.166667	NA	intron (NM_001330557, intron 1 of 21)	intron (NM_001330557, intron 1 of 21)	764	NM_001281533	23136	Hs.213394	NM_012307	ENSG00000082397	EPB41L3	4.1B|DAL-1|DAL1	erythrocyte membrane protein band 4.1 like 3	protein-coding
29.4-11	chr6	41470342	41470701	+	0.166667	NA	Intergenic	CpG	-31923	NR_120347	103106903	Hs.563396	NR_120347	ENSG00000226917	LINC01276	-	long intergenic non-protein coding RNA 1276	ncRNA
38.8001	chr8	141091499	141091731	+	0.166667	NA	Intergenic	AluSx|SINE|Alu	-36974	NM_001362798	22898	Hs.18166	NM_014957	ENSG00000105339	DENND3	-	DENN domain containing 3	protein-coding
42.3667-2	chr1	211378834	211379454	+	0.166667	NA	Intergenic	L2a|LINE|L2	-3611	NR_026761	84791	Hs.523932	NM_032705		LINC00467	C1orf97	long intergenic non-protein coding RNA 467	ncRNA
15.2667-13	chr9	71597232	71597388	+	0.166667	NA	Intergenic	L1PA5|LINE|L1	-150339	NM_001366144	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding
26.1667-7	chr4	63369111	63369411	+	0.166667	NA	Intergenic	Intergenic	1040189	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
66.6667	chr10	25418179	25418757	+	0.166667	NA	intron (NM_020752, intron 4 of 10)	intron (NM_020752, intron 4 of 10)	-233244	NR_108067	101929052	Hs.128298	NR_108067	ENSG00000280809	LINC00836	-	long intergenic non-protein coding RNA 836	ncRNA
37.4334-2	chr2	124942445	124942759	+	0.166667	NA	Intergenic	MER97b|DNA|hAT-Tip100	917315	NM_001367498	129684	Hs.660653	NM_130773	ENSG00000155052	CNTNAP5	caspr5	contactin associated protein like 5	protein-coding
24-7	chr2	107818106	107818291	+	0.166667	NA	intron (NR_126370, intron 3 of 4)	MSTB2|LTR|ERVL-MaLR	8571	NR_024439	729121	Hs.386155	NR_024439	ENSG00000230651	RGPD4-AS1	-	RGPD4 antisense RNA 1 (head to head)	ncRNA
39.7333-4	chr7	108963526	108963923	+	0.166667	NA	Intergenic	L1ME3A|LINE|L1	-79137	NM_001024607	154907	Hs.276325	NM_001024607		C7orf66	-	chromosome 7 open reading frame 66	protein-coding
27.1-3	chr15	63120361	63120678	+	0.166667	NA	Intergenic	Intergenic	-1342	NM_171846	114294	Hs.410388	NM_032857	ENSG00000103642	LACTB	G24|MRPL56	lactamase beta	protein-coding
21.1-13	chr8	127678230	127678388	+	0.166667	NA	Intergenic	Intergenic	55658	NR_117101	100270680	Hs.333720	NR_117101	ENSG00000249375	CASC11	CARLO7|CARLo-7|LINC00990|TCONS_00014535	cancer susceptibility 11	ncRNA
47.1666-2	chr1	94489814	94490477	+	0.166667	NA	intron (NM_002858, intron 15 of 22)	L1MA9|LINE|L1	51614	NM_001993	2152	Hs.62192	NM_001993	ENSG00000117525	F3	CD142|TF|TFA	coagulation factor III, tissue factor	protein-coding
45.9666	chr8	139028076	139029114	+	0.166667	NA	Intergenic	(TTA)n|Simple_repeat|Simple_repeat	-114554	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
45.6001	chr15	64292354	64292631	+	0.166667	NA	intron (NM_001329607, intron 2 of 11)	intron (NM_001329607, intron 2 of 11)	63681	NM_001329606	53944	Hs.646508	NM_022048	ENSG00000169118	CSNK1G1	CK1gamma1	casein kinase 1 gamma 1	protein-coding
58.5001	chr1	205512627	205513099	+	0.166667	NA	intron (NM_002596, intron 1 of 15)	intron (NM_002596, intron 1 of 15)	8194	NM_002596	5129	Hs.445402	NM_002596	ENSG00000117266	CDK18	PCTAIRE|PCTAIRE3|PCTK3	cyclin dependent kinase 18	protein-coding
29.1334	chr1	232623116	232623382	+	0.166667	NA	Intergenic	Intergenic	-94822	NR_146922	105373199	Hs.254475	NR_146922	ENSG00000225919	LINC01745	-	long intergenic non-protein coding RNA 1745	ncRNA
52.4	chr1	52686715	52687306	+	0.166667	NA	3' UTR (NM_023077, exon 3 of 3)	3' UTR (NM_023077, exon 3 of 3)	11337	NM_023077	65260	Hs.349905	NM_023077	ENSG00000162377	COA7	C1orf163|RESA1|SCAN3|SELRC1	cytochrome c oxidase assembly factor 7 (putative)	protein-coding
23.8334	chr10	6749733	6749902	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	12435	NR_138480	108570035	Hs.568834	NR_138480		LINP1	-	lncRNA in non-homologous end joining pathway 1	ncRNA
39.7334-2	chr20	49213762	49214091	+	0.166667	NA	intron (NM_001319135, intron 1 of 14)	intron (NM_001319135, intron 1 of 14)	-5369	NM_001348187	55661	Hs.65234	NM_017895	ENSG00000124228	DDX27	DRS1|Drs1p|HSPC259|PP3241|RHLP|dJ686N3.1	DEAD-box helicase 27	protein-coding
69.9668	chr1	38400937	38401503	+	0.166667	NA	Intergenic	L1ME2|LINE|L1	-73976	NR_146761	105378656	Hs.128924	NR_146761	ENSG00000238063	LINC01685	-	long intergenic non-protein coding RNA 1685	ncRNA
38.6999	chr4	38116132	38116562	+	0.166667	NA	intron (NM_001253912, intron 18 of 20)	L2a|LINE|L2	-3607	NM_001253915	23216	Hs.176503	NM_015173	ENSG00000065882	TBC1D1	TBC|TBC1	TBC1 domain family member 1	protein-coding
46.3667	chr1	166906950	166907264	+	0.166667	NA	Intergenic	Intergenic	-30843	NM_053053	117143	Hs.435967	NM_053053	ENSG00000152382	TADA1	ADA1|HFI1|STAF42|TADA1L|hADA1	transcriptional adaptor 1	protein-coding
32.6334-3	chr5	121447550	121447756	+	0.166667	NA	Intergenic	L1MA2|LINE|L1	125103	NR_104999	102467226		NR_104999		LOC102467226	-	uncharacterized LOC102467226	ncRNA
46.7334	chrX	155264088	155264494	+	0.166667	NA	5' UTR (NM_171998, exon 1 of 2)	5' UTR (NM_171998, exon 1 of 2)	200	NM_171998	116442	Hs.632832	NM_171998	ENSG00000155961	RAB39B	BGMR|MRX72|WSMN|WSN	RAB39B, member RAS oncogene family	protein-coding
30.6333-5	chr18	80127688	80127976	+	0.166667	NA	intron (NM_014913, intron 2 of 3)	intron (NM_014913, intron 2 of 3)	18570	NM_014913	22850	Hs.131915	NM_014913	ENSG00000101544	ADNP2	ZNF508	ADNP homeobox 2	protein-coding
43.5-2	chr4	8443643	8444089	+	0.166667	NA	intron (NM_152544, intron 1 of 10)	AluSx3|SINE|Alu	3069	NM_001350233	152992	Hs.566191	NM_024950	ENSG00000155275	TRMT44	C4orf23|METTL19|TRM44	tRNA methyltransferase 44 homolog	protein-coding
22.0666-2	chr10	112889149	112889373	+	0.166667	NA	Intergenic	AluJr4|SINE|Alu	-60986	NM_001198529	6934	Hs.593995	NM_030756	ENSG00000148737	TCF7L2	TCF-4|TCF4	transcription factor 7 like 2	protein-coding
36.3667-3	chr3	47244919	47245386	+	0.166667	NA	intron (NM_001134878, intron 15 of 21)	intron (NM_001134878, intron 15 of 21)	5457	NR_145712	109617025		NR_145712		SNORD13J	-	small nucleolar RNA, C/D box 13J	snoRNA
18.5334-2	chr17	27167517	27167681	+	0.166667	NA	Intergenic	ALR/Alpha|Satellite|centr	-78358	NR_135673	105371703	Hs.649918	NR_135673		LOC105371703	-	uncharacterized LOC105371703	ncRNA
62.1334	chr14	49657197	49657767	+	0.166667	NA	intron (NM_001348385, intron 10 of 18)	AluSz|SINE|Alu	-22252	NM_018139	55172	Hs.231761	NM_018139	ENSG00000165506	DNAAF2	C14orf104|CILD10|KTU|PF13	dynein axonemal assembly factor 2	protein-coding
23.6334-2	chr10	27139415	27139608	+	0.166667	NA	intron (NM_001253866, intron 3 of 17)	intron (NM_001253866, intron 3 of 17)	14873	NM_139312	10730	Hs.74647	NM_014263	ENSG00000136758	YME1L1	FTSH|MEG4|OPA11|PAMP|YME1L	YME1 like 1 ATPase	protein-coding
47.0001	chr12	9979226	9979575	+	0.166667	NA	exon (NM_138337, exon 3 of 6)	exon (NM_138337, exon 3 of 6)	7991	NM_138337	160364	Hs.190519	NM_138337	ENSG00000172322	CLEC12A	CD371|CLL-1|CLL1|DCAL-2|MICL	C-type lectin domain family 12 member A	protein-coding
29.5667	chr12	28669424	28669673	+	0.166667	NA	Intergenic	L1PA10|LINE|L1	-478810	NR_148936	729291	Hs.129278	NR_148936		LOC729291	-	uncharacterized LOC729291	ncRNA
42.5667-2	chr6	153087550	153088082	+	0.166667	NA	intron (NM_012419, intron 1 of 4)	intron (NM_012419, intron 1 of 4)	43466	NM_012419	26575	Hs.166313	NM_012419	ENSG00000091844	RGS17	RGS-17|RGSZ2|hRGS17	regulator of G protein signaling 17	protein-coding
50.2-3	chr3	162517190	162517540	+	0.166667	NA	Intergenic	Intergenic	785936	NR_033945	647107	Hs.408584	NR_033945	ENSG00000241369	LINC01192	CT64	long intergenic non-protein coding RNA 1192	ncRNA
39.7334	chr15	84040003	84040346	+	0.166667	NA	TTS (NM_001301110)	TTS (NM_001301110)	-40013	NR_036652	648809	Hs.585157	NR_036652		EFL1P1	EFTUD1P1|FAM42B|HsT19321	elongation factor like GTPase 1 pseudogene 1	pseudo
34.4334-4	chr15	82829185	82829474	+	0.166667	NA	intron (NM_001080435, intron 8 of 9)	intron (NM_001080435, intron 8 of 9)	19701	NM_001080435	123720	Hs.377360	NM_001080435	ENSG00000156232	WHAMM	WHAMM1|WHDC1	WASP homolog associated with actin, golgi membranes and microtubules	protein-coding
27.1-12	chrX	147230518	147230789	+	0.166667	NA	TTS (NR_030233)	TTS (NR_030233)	190	NR_030233	574511		NR_030233	ENSG00000207731	MIR506	MIRN506|hsa-mir-506|mir-506	microRNA 506	ncRNA
18.1333-6	chr12	118389944	118390095	+	0.166667	NA	intron (NM_022491, intron 5 of 11)	intron (NM_022491, intron 5 of 11)	13464	NM_022491	64426	Hs.416630	NM_022491	ENSG00000111707	SUDS3	SAP45|SDS3	SDS3 homolog, SIN3A corepressor complex component	protein-coding
33.0334-4	chr4	93229048	93229280	+	0.166667	NA	intron (NM_001286838, intron 6 of 14)	intron (NM_001286838, intron 6 of 14)	-599589	NM_005172	474	Hs.532680	NM_005172	ENSG00000172238	ATOH1	ATH1|HATH1|MATH-1|bHLHa14	atonal bHLH transcription factor 1	protein-coding
22.0667-5	chr2	67482550	67482729	+	0.166667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	85306	NM_019002	54465	Hs.353022	NM_019002	ENSG00000143971	ETAA1	ETAA16	ETAA1 activator of ATR kinase	protein-coding
62.7-2	chr1	215235880	215236489	+	0.166667	NA	3' UTR (NM_001017425, exon 7 of 7)	3' UTR (NM_001017425, exon 7 of 7)	153447	NM_014217	3776	Hs.497745	NM_014217	ENSG00000082482	KCNK2	K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e	potassium two pore domain channel subfamily K member 2	protein-coding
32.9-4	chr15	66822670	66823089	+	0.166667	NA	Intergenic	Intergenic	120643	NR_027654	4091	Hs.153863	NM_005585	ENSG00000137834	SMAD6	AOVD2|HsT17432|MADH6|MADH7	SMAD family member 6	protein-coding
42.7667-3	chr3	152476855	152477233	+	0.166667	NA	Intergenic	Intergenic	-136054	NR_132656	645843	Hs.632562	NM_001123228	ENSG00000221962	TMEM14EP	TMEM14E	transmembrane protein 14E, pseudogene	pseudo
41.2334	chr6	156407107	156407451	+	0.166667	NA	Intergenic	Intergenic	28529	NR_145751	109617011		NR_145751	ENSG00000212295	SNORD28B	-	small nucleolar RNA, C/D box 28B	snoRNA
37.6333-3	chr2	159766436	159766706	+	0.166667	NA	intron (NM_001282805, intron 11 of 11)	intron (NM_001282805, intron 11 of 11)	31637	NM_014880	9936	Hs.130014	NM_014880	ENSG00000241399	CD302	BIMLEC|CLEC13A|DCL-1|DCL1	CD302 molecule	protein-coding
34.7-9	chr6	13175354	13175723	+	0.166667	NA	intron (NM_001322308, intron 5 of 13)	intron (NM_001322308, intron 5 of 13)	107904	NR_134859	100130357	Hs.484678	NM_001242698		LOC100130357	-	uncharacterized LOC100130357	ncRNA
29.1334-5	chr9	90669294	90669606	+	0.166667	NA	Intergenic	L1M4c|LINE|L1	-26626	NM_017594	54769	Hs.165636	NM_017594	ENSG00000165023	DIRAS2	Di-Ras2	DIRAS family GTPase 2	protein-coding
42.9667-6	chr6	147234595	147234952	+	0.166667	NA	intron (NM_139244, intron 2 of 25)	intron (NM_139244, intron 2 of 25)	-30159	NR_034115	729178	Hs.557608	NR_034115		STXBP5-AS1	-	STXBP5 antisense RNA 1	ncRNA
32.4-3	chr14	84950148	84950459	+	0.166667	NA	Intergenic	Intergenic	-321629	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
21.3334-3	chr6	169159199	169159396	+	0.166667	NA	intron (NR_132622, intron 2 of 3)	intron (NR_132622, intron 2 of 3)	3004	NR_132622	101929484	Hs.364166	NR_132622	ENSG00000223485	LINC01615	-	long intergenic non-protein coding RNA 1615	ncRNA
17.0666	chr1	91759005	91759168	+	0.166667	NA	intron (NR_036634, intron 4 of 17)	intron (NR_036634, intron 4 of 17)	127065	NM_003243	7049	Hs.482390	NM_003243	ENSG00000069702	TGFBR3	BGCAN|betaglycan	transforming growth factor beta receptor 3	protein-coding
32.8667-2	chr2	9940775	9941072	+	0.166667	NA	Intergenic	Intergenic	-10770	NM_198182	29841	Hs.418493	NM_198182	ENSG00000134317	GRHL1	LBP32|MGR|NH32|TFCP2L2	grainyhead like transcription factor 1	protein-coding
27.5334	chr21	22350640	22350960	+	0.166667	NA	Intergenic	Intergenic	252183	NR_038400	54143	Hs.352631	NR_038400	ENSG00000184856	LINC00308	C21orf74|NCRNA00308|PRED16	long intergenic non-protein coding RNA 308	ncRNA
31.0334	chr7	41288640	41289098	+	0.166667	NA	Intergenic	MSTB-int|LTR|ERVL-MaLR	187265	NR_110832	101928773	Hs.382363	NR_110832	ENSG00000224017	LINC01449	-	long intergenic non-protein coding RNA 1449	ncRNA
38.3334	chr11	21029386	21029837	+	0.166667	NA	intron (NM_201551, intron 12 of 18)	intron (NM_201551, intron 12 of 18)	360025	NM_006157	4745	Hs.657172	NM_006157	ENSG00000165973	NELL1	IDH3GL|NRP1	neural EGFL like 1	protein-coding
46.6-7	chr8	140689496	140690078	+	0.166667	NA	intron (NR_148037, intron 28 of 34)	L1MC4|LINE|L1	28782	NM_001352752	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding
50.3999	chr1	99536578	99537238	+	0.166667	NA	intron (NR_031666, intron 3 of 4)	intron (NR_031666, intron 3 of 4)	-49104	NR_125951	101928270	Hs.576048	NR_125951	ENSG00000224445	LINC01708	-	long intergenic non-protein coding RNA 1708	ncRNA
31.6333-9	chr5	111694479	111694870	+	0.166667	NA	intron (NR_040093, intron 2 of 6)	intron (NR_040093, intron 2 of 6)	61577	NM_001142483	9315	Hs.36053	NM_004772	ENSG00000134986	NREP	C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17	neuronal regeneration related protein	protein-coding
38.8334-2	chr3	8154360	8154696	+	0.166667	NA	Intergenic	Intergenic	-138221	NR_110131	101927394	Hs.517767	NR_110131	ENSG00000227110	LOC101927394	-	uncharacterized LOC101927394	ncRNA
35.7-7	chr7	110802811	110803065	+	0.166667	NA	intron (NM_001350963, intron 5 of 5)	L2c|LINE|L2	-288068	NM_001099660	54674	Hs.3781	NM_018334	ENSG00000173114	LRRN3	FIGLER5|NLRR-3|NLRR3	leucine rich repeat neuronal 3	protein-coding
20.8334	chr20	59024250	59024434	+	0.166667	NA	exon (NM_030773, exon 4 of 4)	exon (NM_030773, exon 4 of 4)	5088	NM_030773	81027	Hs.303023	NM_030773	ENSG00000101162	TUBB1	-	tubulin beta 1 class VI	protein-coding
17.7333-10	chr4	33087744	33087930	+	0.166667	NA	Intergenic	Intergenic	736799	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
35.2667-2	chr19	28152471	28152764	+	0.166667	NA	Intergenic	Intergenic	-358677	NR_027301	148189	Hs.706547	NR_027301	ENSG00000261824	LINC00662	-	long intergenic non-protein coding RNA 662	ncRNA
22.3667-2	chr10	70956491	70956819	+	0.166667	NA	Intergenic	Intergenic	17602	NR_134314	105378349	Hs.119164	NR_134313	ENSG00000259267	LINC02622	-	long intergenic non-protein coding RNA 2622	ncRNA
41.5001	chr2	152964281	152964613	+	0.166667	NA	Intergenic	Intergenic	245810	NR_146429	151188	Hs.643580	NM_152522	ENSG00000177917	ARL6IP6	AIP-6|AIP6|PFAAP1	ADP ribosylation factor like GTPase 6 interacting protein 6	protein-coding
25.6667-10	chr7	83854476	83854945	+	0.166667	NA	Intergenic	Intergenic	-205571	NM_012431	9723	Hs.440730	NM_012431	ENSG00000170381	SEMA3E	M-SEMAH|M-SemaK|SEMAH|coll-5	semaphorin 3E	protein-coding
35-5	chr3	55080160	55080480	+	0.166667	NA	Intergenic	MER58B|DNA|hAT-Charlie	-97852	NR_147142	105377096	Hs.640507	NR_147142	ENSG00000243572	LINC02017	-	long intergenic non-protein coding RNA 2017	ncRNA
37.9001	chr2	235979665	235979955	+	0.166667	NA	intron (NM_001037131, intron 13 of 17)	intron (NM_001037131, intron 13 of 17)	188576	NM_001301687	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding
17.5-11	chr7	34776449	34776579	+	0.166667	NA	intron (NR_015356, intron 1 of 4)	L1M1|LINE|L1	-18242	NR_033665	404744	Hs.487951	NM_207283	ENSG00000197085	NPSR1-AS1	AAA1	NPSR1 antisense RNA 1	ncRNA
20.5667-12	chr8	72820983	72821153	+	0.166667	NA	intron (NM_004770, intron 2 of 2)	intron (NM_004770, intron 2 of 2)	89023	NR_110656	101926908	Hs.680588	NR_110656	ENSG00000253726	LOC101926908	-	uncharacterized LOC101926908	ncRNA
20.0667	chr1	105534063	105534288	+	0.166667	NA	Intergenic	L1MB3|LINE|L1	84760	NR_125954	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
25-4	chr18	25146800	25147080	+	0.166667	NA	intron (NM_001308225, intron 4 of 6)	intron (NM_001308225, intron 4 of 6)	-158961	NR_146903	105372030		NR_146903		LINC01894	-	long intergenic non-protein coding RNA 1894	ncRNA
36.1667-6	chr2	172129457	172129805	+	0.166667	NA	Intergenic	L1MEf|LINE|L1	26625	NR_126376	104326193	Hs.600690	NR_126376	ENSG00000236651	DLX2-DT	DLX2-AS1|TCONS_00003049	DLX2 divergent transcript	ncRNA
28.0334-2	chr4	98815305	98815543	+	0.166667	NA	Intergenic	MER41-int|LTR|ERV1	113709	NM_001130678	1977	Hs.13211	NM_001968	ENSG00000151247	EIF4E	AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E	eukaryotic translation initiation factor 4E	protein-coding
20.1334-2	chr8	102340559	102340679	+	0.166667	NA	intron (NM_001282873, intron 9 of 58)	intron (NM_001282873, intron 9 of 58)	72070	NM_001282873	51366	Hs.492445	NM_015902	ENSG00000104517	UBR5	DD5|EDD|EDD1|HYD	ubiquitin protein ligase E3 component n-recognin 5	protein-coding
55.4666-5	chr6	50032345	50032972	+	0.166667	NA	Intergenic	L1PA16|LINE|L1	-10664	NM_001037497	245913	Hs.571093	NM_001037497	ENSG00000203970	DEFB110	DEFB-10|DEFB-11|DEFB111	defensin beta 110	protein-coding
37.7334	chr11	7668473	7668804	+	0.166667	NA	intron (NM_001302827, intron 4 of 7)	intron (NM_001302827, intron 4 of 7)	4253	NM_001302827	51700	Hs.414362	NM_016229	ENSG00000166394	CYB5R2	B5R.2	cytochrome b5 reductase 2	protein-coding
18.9334	chr11	45504335	45504517	+	0.166667	NA	Intergenic	L1ME2|LINE|L1	133029	NR_122071	399886	Hs.559970	NR_122071	ENSG00000255267	LINC02687	-	long intergenic non-protein coding RNA 2687	ncRNA
24.8333	chr11	76912619	76913133	+	0.166667	NA	intron (NM_001300953, intron 1 of 9)	MER50B|LTR|ERV1	51958	NM_001300955	55331	Hs.23862	NM_018367	ENSG00000078124	ACER3	APHC|PHCA|PLDECO	alkaline ceramidase 3	protein-coding
41.4334-2	chr22	26615855	26616568	+	0.166667	NA	exon (NM_001887, exon 2 of 6)	exon (NM_001887, exon 2 of 6)	1816	NM_001887	1414	Hs.37135	NM_001887	ENSG00000100122	CRYBB1	CATCN3|CTRCT17	crystallin beta B1	protein-coding
42.2	chr12	39047174	39047592	+	0.166667	NA	Intergenic	Intergenic	-141792	NM_153634	144402	Hs.40910	NM_153634	ENSG00000139117	CPNE8	-	copine 8	protein-coding
19.4-5	chr13	30499418	30499630	+	0.166667	NA	intron (NM_001370340, intron 1 of 4)	intron (NM_001370340, intron 1 of 4)	-33547	NM_001363661	3146	Hs.434102	NM_002128	ENSG00000189403	HMGB1	HMG-1|HMG1|HMG3|SBP-1	high mobility group box 1	protein-coding
12.3-6	chr8	74967707	74967827	+	0.166667	NA	Intergenic	Intergenic	-16738	NM_031461	83690	Hs.436542	NM_031461	ENSG00000121005	CRISPLD1	CRISP-10|CRISP10|LCRISP1	cysteine rich secretory protein LCCL domain containing 1	protein-coding
30.5667-5	chr5	132198816	132199011	+	0.166667	NA	exon (NM_001365678, exon 12 of 16)	exon (NM_001365678, exon 12 of 16)	14037	NR_047470	100861518	Hs.519568	NR_047470	ENSG00000237714	P4HA2-AS1	-	P4HA2 antisense RNA 1	ncRNA
30.6334	chr14	51861669	51862021	+	0.166667	NA	intron (NM_001243774, intron 1 of 2)	intron (NM_001243774, intron 1 of 2)	1233	NM_001243773	54331	Hs.187772	NM_053064	ENSG00000186469	GNG2	-	G protein subunit gamma 2	protein-coding
21.6667-6	chr8	124693727	124693968	+	0.166667	NA	intron (NM_001282971, intron 3 of 14)	intron (NM_001282971, intron 3 of 14)	34626	NM_001363301	9788	Hs.336994	NM_014751	ENSG00000170873	MTSS1	MIM|MIMA|MIMB	MTSS I-BAR domain containing 1	protein-coding
59.7001	chr10	95445410	95446016	+	0.166667	NA	intron (NM_001290295, intron 2 of 24)	intron (NM_001290295, intron 2 of 24)	-4533	NM_001034955	10580	Hs.38621	NM_006434	ENSG00000095637	SORBS1	CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1	sorbin and SH3 domain containing 1	protein-coding
26.9667-3	chr18	25011061	25011493	+	0.166667	NA	Intergenic	Intergenic	-23298	NR_146903	105372030		NR_146903		LINC01894	-	long intergenic non-protein coding RNA 1894	ncRNA
32.9667-4	chr7	1510097	1510477	+	0.166667	NA	Intergenic	AluJo|SINE|Alu	-5898	NM_001080453	26173	Hs.532188	NM_001080453	ENSG00000164880	INTS1	INT1|NET28	integrator complex subunit 1	protein-coding
56.6334-3	chr2	238784638	238785482	+	0.166667	NA	Intergenic	Intergenic	62847	NR_157851	100287387	Hs.516864	NR_157851		LOC100287387	-	uncharacterized LOC100287387	ncRNA
27.2667	chr10	68753512	68753708	+	0.166667	NA	intron (NR_104262, intron 10 of 23)	intron (NR_104262, intron 10 of 23)	-1562	NR_003076	692211		NR_003076	ENSG00000283551	SNORD98	HBII-419	small nucleolar RNA, C/D box 98	snoRNA
31.7-2	chr10	64604641	64604908	+	0.166667	NA	Intergenic	MLT2B1|LTR|ERVL	-220754	NR_001446	305	Hs.591361	NR_001446		ANXA2P3	ANX2L3|ANX2P3|LIP2|LPC2C	annexin A2 pseudogene 3	pseudo
54.4	chr11	95796405	95796855	+	0.166667	NA	intron (NM_001243776, intron 2 of 11)	intron (NM_001243776, intron 2 of 11)	6132	NM_014679	9702	Hs.101014	NM_014679	ENSG00000166037	CEP57	MVA2|PIG8|TSP57	centrosomal protein 57	protein-coding
41.3667-2	chr17	75896694	75897298	+	0.166667	NA	promoter-TSS (NM_173547)	promoter-TSS (NM_173547)	-45	NM_001256124	201292	Hs.189823	NM_173547	ENSG00000141569	TRIM65	4732463G12Rik	tripartite motif containing 65	protein-coding
48.9666-2	chr3	31208797	31209381	+	0.166667	NA	Intergenic	L1MB3|LINE|L1	-47302	NR_130459	100423038		NR_130459	ENSG00000265376	MIR466	hsa-mir-466	microRNA 466	ncRNA
38.2001	chr10	120717328	120717636	+	0.166667	NA	Intergenic	MIR3|SINE|MIR	119533	NR_103717	404216	Hs.196578	NM_001012711	ENSG00000177234	LINC01561	C10orf85	long intergenic non-protein coding RNA 1561	ncRNA
33.8001	chr8	108244041	108244343	+	0.166667	NA	intron (NM_001568, intron 1 of 12)	MER58D|DNA|hAT-Charlie	4525	NM_001568	3646	Hs.405590	NM_001568	ENSG00000104408	EIF3E	EIF3-P48|EIF3S6|INT6|eIF3-p46	eukaryotic translation initiation factor 3 subunit E	protein-coding
45.3334-3	chr7	78723759	78724079	+	0.166667	NA	intron (NM_001301128, intron 2 of 20)	intron (NM_001301128, intron 2 of 20)	-285069	NR_046689	100874021	Hs.128252	NR_046689	ENSG00000226978	MAGI2-AS2	-	MAGI2 antisense RNA 2	ncRNA
31.9667-3	chr7	140683346	140683784	+	0.166667	NA	intron (NM_052853, intron 4 of 7)	intron (NM_052853, intron 4 of 7)	10620	NM_052853	90956	Hs.744886	NM_052853	ENSG00000133597	ADCK2	AARF	aarF domain containing kinase 2	protein-coding
45.8667-2	chr14	56569453	56569858	+	0.166667	NA	Intergenic	Intergenic	-10143	NM_017799	54916	Hs.497253	NM_017799	ENSG00000070269	TMEM260	C14orf101|SHDRA	transmembrane protein 260	protein-coding
43.8667-2	chr15	100910569	100911104	+	0.166667	NA	intron (NM_000693, intron 12 of 12)	intron (NM_000693, intron 12 of 12)	8447	NR_135831	101927751	Hs.659224	NR_135827	ENSG00000259583	LOC101927751	-	uncharacterized LOC101927751	ncRNA
20.8-10	chr2	36842955	36843079	+	0.166667	NA	3' UTR (NM_003162, exon 18 of 18)	3' UTR (NM_003162, exon 18 of 18)	123519	NM_003162	6801	Hs.127486	NM_003162	ENSG00000115808	STRN	PPP2R6A|SG2NA|STRN1	striatin	protein-coding
28.1667	chr10	43193691	43194007	+	0.166667	NA	TTS (NM_001282862)	TTS (NM_001282862)	35890	NM_001282862	221002	Hs.125293	NM_145313	ENSG00000198915	RASGEF1A	CG4853	RasGEF domain family member 1A	protein-coding
27.3	chr12	75590469	75590722	+	0.166667	NA	Intergenic	Intergenic	-78986	NM_007043	11103	Hs.645517	NM_007043	ENSG00000111615	KRR1	HRB2|RIP-1	KRR1 small subunit processome component homolog	protein-coding
29.6-4	chr11	57744149	57744344	+	0.166667	NA	TTS (NM_170746)	TTS (NM_170746)	2755	NM_170746	280636	Hs.655373	NM_170746	ENSG00000211450	SELENOH	C11orf31|C17orf10|SELH	selenoprotein H	protein-coding
20.5-5	chr18	9602088	9602265	+	0.166667	NA	intron (NM_001042388, intron 2 of 19)	intron (NM_001042388, intron 2 of 19)	12383	NM_005134	9989	Hs.743236	NM_005134	ENSG00000154845	PPP4R1	MEG1|PP4(Rmeg)|PP4R1	protein phosphatase 4 regulatory subunit 1	protein-coding
75.5333	chr10	107299802	107300479	+	0.166667	NA	Intergenic	Intergenic	-135434	NM_001206570	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
30.6333-6	chr2	115721136	115721490	+	0.166667	NA	intron (NM_001321912, intron 8 of 25)	intron (NM_001321912, intron 8 of 25)	377498	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
19.8333-2	chr10	37239670	37239880	+	0.166667	NA	Intergenic	Intergenic	-69411	NR_104061	101929520	Hs.144151	NR_104061	ENSG00000235687	LINC00993	-	long intergenic non-protein coding RNA 993	ncRNA
18.2667-16	chr5	43485944	43486100	+	0.166667	NA	TTS (NM_198566)	TTS (NM_198566)	-2157	NM_022483	64417	Hs.732093	NM_022483	ENSG00000151881	TMEM267	C5orf28	transmembrane protein 267	protein-coding
28.4-6	chr2	44774140	44774406	+	0.166667	NA	Intergenic	Intergenic	164615	NR_147194	107985879	Hs.436392	NR_147194	ENSG00000259439	LINC01833	K21.1|RP11-89	long intergenic non-protein coding RNA 1833	ncRNA
40.8667-2	chr2	41312774	41313137	+	0.166667	NA	Intergenic	Intergenic	-564600	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA
64.9334	chr2	39936310	39936852	+	0.166667	NA	intron (NR_038441, intron 2 of 4)	L1P4|LINE|L1	18947	NR_038441	100128590	Hs.744988	NR_038441	ENSG00000227028	SLC8A1-AS1	-	SLC8A1 antisense RNA 1	ncRNA
9.60001	chr13	57664881	57664982	+	0.166667	NA	intron (NM_001040429, intron 1 of 3)	intron (NM_001040429, intron 1 of 3)	33187	NM_001040429	27253	Hs.106511	NM_014459	ENSG00000118946	PCDH17	PCDH68|PCH68	protocadherin 17	protein-coding
23.9667-7	chr4	178253321	178253536	+	0.166667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-345492	NR_108092	101928656	Hs.508131	NR_108092	ENSG00000251504	LINC01099	-	long intergenic non-protein coding RNA 1099	ncRNA
17.1-5	chr12	58761260	58761459	+	0.166667	NA	intron (NR_120452, intron 1 of 7)	intron (NR_120452, intron 1 of 7)	20357	NR_120452	101927653	Hs.130744	NR_120452	ENSG00000257259	LINC02388	-	long intergenic non-protein coding RNA 2388	ncRNA
28.4667-7	chr2	99851656	99851865	+	0.166667	NA	intron (NM_001025108, intron 6 of 23)	intron (NM_001025108, intron 6 of 23)	253823	NM_001025108	3899	Hs.444414	NM_002285	ENSG00000144218	AFF3	LAF4|MLLT2-like	AF4/FMR2 family member 3	protein-coding
23.1-21	chr9	128896219	128896484	+	0.166667	NA	intron (NM_001127244, intron 2 of 3)	L1ME3C|LINE|L1	-13828	NM_001352988	883	Hs.495250	NM_004059	ENSG00000171097	KYAT1	CCBL1|GTK|KAT1|KATI	kynurenine aminotransferase 1	protein-coding
41.1-2	chr2	105122929	105123331	+	0.166667	NA	Intergenic	L1ME2|LINE|L1	-20186	NR_110227	101927492	Hs.469537	NR_110227	ENSG00000231851	UTAT33	-	uncharacterized LOC101927492	ncRNA
22.8334-3	chr2	229152320	229152526	+	0.166667	NA	intron (NM_001330157, intron 1 of 1)	L2c|LINE|L2	79669	NM_001330156	55022	Hs.745038	NM_017933	ENSG00000153823	PID1	HMFN2073|NYGGF4|P-CLI1|PCLI1	phosphotyrosine interaction domain containing 1	protein-coding
26.1334-2	chr6	108491646	108491816	+	0.166667	NA	intron (NM_001323005, intron 10 of 11)	intron (NM_001323005, intron 10 of 11)	-68094	NM_201559	2309	Hs.220950	NM_001455	ENSG00000118689	FOXO3	AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A	forkhead box O3	protein-coding
22.9-4	chr10	112721310	112721551	+	0.166667	NA	intron (NM_001365713, intron 8 of 8)	MIRc|SINE|MIR	87260	NR_036177	100422909		NR_036177	ENSG00000264763	MIR4295	-	microRNA 4295	ncRNA
47.7334-2	chr9	27298827	27299410	+	0.166667	NA	Intergenic	L1PB3|LINE|L1	-1968	NM_020641	54586	Hs.163070	NM_020641	ENSG00000120160	EQTN	AFAF|C9orf11|SPACA8	equatorin	protein-coding
44.7334	chr14	54365588	54365977	+	0.166667	NA	Intergenic	AluJb|SINE|Alu	-31086	NM_001330173	1033	Hs.84113	NM_005192	ENSG00000100526	CDKN3	CDI1|CIP2|KAP|KAP1	cyclin dependent kinase inhibitor 3	protein-coding
31.7667-3	chr7	71749240	71749520	+	0.166667	NA	Intergenic	LTR26|LTR|ERV1	-441610	NR_037477	100500836		NR_037477	ENSG00000265878	MIR3914-1	-	microRNA 3914-1	ncRNA
37.7-9	chr8	122230314	122230607	+	0.166667	NA	Intergenic	Intergenic	338184	NR_131202	105375734	Hs.628341	NR_131202		SMILR	-	smooth muscle induced lncRNA, enhancer of proliferation	ncRNA
24.4667-6	chr16	64278609	64278841	+	0.166667	NA	Intergenic	Intergenic	843338	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
18.2667-18	chr6	113356460	113356629	+	0.166667	NA	Intergenic	Intergenic	76903	NR_149098	105377957	Hs.25088	NR_149098	ENSG00000232316	LINC02518	-	long intergenic non-protein coding RNA 2518	ncRNA
42.5334-2	chr13	114109565	114109902	+	0.166667	NA	intron (NM_001320821, intron 1 of 25).2	CpG	22890	NM_007368	22821	Hs.593075	NM_007368	ENSG00000185989	RASA3	GAP1IP4BP|GAPIII	RAS p21 protein activator 3	protein-coding
51.9	chr14	23616964	23617414	+	0.166667	NA	Intergenic	Charlie1|DNA|hAT-Charlie	-12926	NM_001318835	10202	Hs.272499	NM_005794	ENSG00000100867	DHRS2	HEP27|SDR25C1	dehydrogenase/reductase 2	protein-coding
21.2334	chr1	74761876	74762036	+	0.166667	NA	intron (NM_138467, intron 5 of 5)	L2|LINE|L2	-28548	NM_001130043	1429	Hs.83114	NM_001889	ENSG00000116791	CRYZ	-	crystallin zeta	protein-coding
33.8334-2	chr20	62433181	62433505	+	0.166667	NA	Intergenic	Intergenic	-5804	NM_080833	140893	Hs.180374	NM_080833	ENSG00000130701	RBBP8NL	C20orf151	RBBP8 N-terminal like	protein-coding
21.1-2	chr17	74877747	74878027	+	0.166667	NA	3' UTR (NM_178128, exon 6 of 6)	3' UTR (NM_178128, exon 6 of 6)	-4893	NM_001258012	2232	Hs.69745	NM_004110	ENSG00000161513	FDXR	ADR|ADXR|ANOA	ferredoxin reductase	protein-coding
29.4667-4	chr14	75866053	75866484	+	0.166667	NA	intron (NM_015072, intron 29 of 31)	intron (NM_015072, intron 29 of 31)	115727	NM_001329938	7043	Hs.592317	NM_003239	ENSG00000119699	TGFB3	ARVD|ARVD1|LDS5|RNHF|TGF-beta3	transforming growth factor beta 3	protein-coding
23.2667-12	chr7	88466898	88467051	+	0.166667	NA	Intergenic	Intergenic	-160080	NM_001205315	79689	Hs.521008	NM_024636	ENSG00000127954	STEAP4	STAMP2|SchLAH|TIARP|TNFAIP9	STEAP4 metalloreductase	protein-coding
22.5334-2	chr5	173032270	173032405	+	0.166667	NA	intron (NM_003945, intron 3 of 3)	AluSz|SINE|Alu	11611	NR_002988	677841	Hs.692720	NR_002988	ENSG00000212402	SNORA74B	U19-2	small nucleolar RNA, H/ACA box 74B	snoRNA
32.9333-2	chr11	30968167	30968662	+	0.166667	NA	intron (NM_001367979, intron 20 of 38)	MER44A|DNA|TcMar-Tigger	24272	NM_020869	341019	Hs.127405	NM_020869	ENSG00000170959	DCDC1	DCDC5	doublecortin domain containing 1	protein-coding
31.4667-2	chr10	31221369	31221612	+	0.166667	NA	intron (NR_134478, intron 1 of 2)	L1MEd|LINE|L1	33607	NR_134478	101929352	Hs.209289	NR_134478		LINC02664	-	long intergenic non-protein coding RNA 2664	ncRNA
41.5334-2	chr14	44436458	44436894	+	0.166667	NA	Intergenic	MIR|SINE|MIR	70607	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
26.6334-3	chr6	97855315	97855514	+	0.166667	NA	Intergenic	Intergenic	-169117	NR_031579	100302164		NR_031579	ENSG00000238367	MIR2113	hsa-mir-2113	microRNA 2113	ncRNA
43.3-6	chr7	19965875	19966451	+	0.166667	NA	intron (NR_110114, intron 4 of 5)	L1MC3|LINE|L1	174263	NR_110114	101927668	Hs.715900	NR_110114		LOC101927668	-	uncharacterized LOC101927668	ncRNA
18.1333-3	chr11	23639169	23639318	+	0.166667	NA	Intergenic	L1MA1|LINE|L1	-220053	NR_107021	102465860		NR_107021	ENSG00000275868	MIR8054	hsa-mir-8054	microRNA 8054	ncRNA
43.1333	chr1	4510207	4510504	+	0.166667	NA	Intergenic	Intergenic	-61132	NR_147025	105376679		NR_147025	ENSG00000232596	LINC01646	-	long intergenic non-protein coding RNA 1646	ncRNA
50.4334	chr14	85456504	85456952	+	0.166667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	62813	NR_102738	100996280	Hs.135735	NR_102737	ENSG00000259107	LINC00911	-	long intergenic non-protein coding RNA 911	ncRNA
33.7334-5	chr7	30737067	30737411	+	0.166667	NA	Intergenic	L1MC1|LINE|L1	-14896	NM_006774	11185	Hs.632629	NM_006774	ENSG00000241644	INMT	TEMT	indolethylamine N-methyltransferase	protein-coding
29.2-2	chr10	86186529	86186859	+	0.166667	NA	intron (NM_017551, intron 3 of 15)	MIRb|SINE|MIR	78094	NR_029907	442911		NR_029907	ENSG00000199104	MIR346	MIRN346|hsa-mir-346|miR-346|miRNA346	microRNA 346	ncRNA
20.3667-2	chr11	31801488	31801657	+	0.166667	NA	promoter-TSS (NM_001368930)	promoter-TSS (NM_001368930)	-911	NM_001368930	5080	Hs.270303	NM_000280	ENSG00000007372	PAX6	AN|AN2|ASGD5|D11S812E|FVH1|MGDA|WAGR	paired box 6	protein-coding
16.0667-4	chr13	27259370	27259525	+	0.166667	NA	Intergenic	Intergenic	4046	NR_002575	619499	Hs.689719	NR_002575	ENSG00000207051	SNORA27	ACA27	small nucleolar RNA, H/ACA box 27	snoRNA
30.8667	chr12	611460	611784	+	0.166667	NA	intron (NM_016533, intron 1 of 3)	AluSz|SINE|Alu	-1206	NM_001294345	4815	Hs.655804	NM_016533	ENSG00000171840	NINJ2	-	ninjurin 2	protein-coding
16.1-3	chr11	88357660	88357801	+	0.166667	NA	Intergenic	L2c|LINE|L2	-19994	NM_001814	1075	Hs.128065	NM_001814	ENSG00000109861	CTSC	CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS	cathepsin C	protein-coding
25.5667-16	chr8	81035529	81035769	+	0.166667	NA	intron (NM_018440, intron 2 of 8)	intron (NM_018440, intron 2 of 8)	76419	NM_018440	55824	Hs.266175	NM_018440	ENSG00000076641	PAG1	CBP|PAG	phosphoprotein membrane anchor with glycosphingolipid microdomains 1	protein-coding
36.3333-4	chr6	35185239	35185476	+	0.166667	NA	Intergenic	Intergenic	-28599	NM_152753	222663	Hs.12923	NM_152753	ENSG00000146197	SCUBE3	CEGF3	signal peptide, CUB domain and EGF like domain containing 3	protein-coding
28.9-5	chr13	84123781	84124195	+	0.166667	NA	Intergenic	Intergenic	-16614	NR_046871	100874128	Hs.578060	NR_046871		LINC00333	NCRNA00333	long intergenic non-protein coding RNA 333	ncRNA
52.6667-6	chr7	54407669	54408161	+	0.166667	NA	Intergenic	L1PA11|LINE|L1	77218	NR_120515	102723605	Hs.154626	NR_120515	ENSG00000231427	LINC01445	-	long intergenic non-protein coding RNA 1445	ncRNA
39.7-2	chr19	48233200	48233496	+	0.166667	NA	intron (NM_001351788, intron 4 of 10)	intron (NM_001351788, intron 4 of 10)	7715	NR_033679	22900	Hs.68846	NM_014959	ENSG00000105483	CARD8	CARDINAL|DACAR|DAKAR|NDPP|NDPP1|TUCAN	caspase recruitment domain family member 8	protein-coding
33.6667-4	chr2	179027994	179028491	+	0.166667	NA	intron (NM_001316745, intron 2 of 11)	intron (NM_001316745, intron 2 of 11)	21895	NM_001316745	285025	Hs.324341	NM_173648	ENSG00000163492	CCDC141	CAMDI	coiled-coil domain containing 141	protein-coding
29.1667-13	chr6	88105224	88105569	+	0.166667	NA	Intergenic	L2c|LINE|L2	39941	NM_033181	1268	Hs.75110	NM_016083	ENSG00000118432	CNR1	CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR	cannabinoid receptor 1	protein-coding
21.6667-3	chr17	10469503	10469699	+	0.166667	NA	promoter-TSS (NM_017533)	promoter-TSS (NM_017533)	-42	NM_017533	4622	Hs.711141	NM_017533	ENSG00000264424	MYH4	MYH2B|MyHC-2B|MyHC-IIb	myosin heavy chain 4	protein-coding
56.3668	chr20	63317949	63318342	+	0.166667	NA	intron (NM_020882, intron 21 of 35)	intron (NM_020882, intron 21 of 35)	24959	NM_020882	57642	Hs.271285	NM_020882	ENSG00000101203	COL20A1	-	collagen type XX alpha 1 chain	protein-coding
20.4667-2	chr1	180765665	180765847	+	0.166667	NA	intron (NR_137330, intron 2 of 12)	MER2|DNA|TcMar-Tigger	133734	NM_001135669	9213	Hs.227656	NM_004736	ENSG00000143324	XPR1	IBGC6|SLC53A1|SYG1|X3	xenotropic and polytropic retrovirus receptor 1	protein-coding
34.1-7	chrX	40876792	40877225	+	0.166667	NA	Intergenic	Intergenic	-43812	NR_027761	100132831	Hs.729923	NR_027761		LOC100132831	-	A20-binding inhibitor of NF-kappaB activation 2 pseudogene	pseudo
30.5667-3	chr17	48527532	48528016	+	0.166667	NA	TTS (NM_002144)	TTS (NM_002144)	3237	NM_002144	3211	Hs.99992	NM_002144	ENSG00000120094	HOXB1	HCFP3|HOX2|HOX2I|Hox-2.9	homeobox B1	protein-coding
30.7667-12	chr8	81125410	81125741	+	0.166667	NA	Intergenic	L1ME3C|LINE|L1	-13507	NM_018440	55824	Hs.266175	NM_018440	ENSG00000076641	PAG1	CBP|PAG	phosphoprotein membrane anchor with glycosphingolipid microdomains 1	protein-coding
32.4334-2	chr6	119686328	119686684	+	0.166667	NA	intron (NR_134600, intron 2 of 3)	intron (NR_134600, intron 2 of 3)	136698	NR_134600	105377975	Hs.671597	NR_134600		LOC105377975	-	uncharacterized LOC105377975	ncRNA
35.7667-7	chr7	31863956	31864316	+	0.166667	NA	intron (NM_001191059, intron 8 of 18)	L3b|LINE|CR1	176921	NM_006658	10842	Hs.227011	NM_006658	ENSG00000106341	PPP1R17	C7orf16|GSBS	protein phosphatase 1 regulatory subunit 17	protein-coding
57.8667	chr6	121329436	121329946	+	0.166667	NA	intron (NR_104452, intron 1 of 35)	intron (NR_104452, intron 1 of 35)	4789	NM_152730	221322	Hs.121396	NM_152730	ENSG00000146350	TBC1D32	BROMI|C6orf170|C6orf171	TBC1 domain family member 32	protein-coding
24.8334	chr12	41907074	41907347	+	0.166667	NA	Intergenic	Intergenic	143021	NR_135040	101927038	Hs.98588	NR_135040	ENSG00000257784	LINC02400	-	long intergenic non-protein coding RNA 2400	ncRNA
28.4-10	chr20	31838715	31839099	+	0.166667	NA	Intergenic	L2a|LINE|L2	6697	NM_004118	2307	Hs.516971	NM_004118	ENSG00000179772	FOXS1	FKHL18|FREAC10	forkhead box S1	protein-coding
28.7-4	chr20	46845877	46846141	+	0.166667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-48615	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding
45.3-6	chr9	17103180	17103604	+	0.166667	NA	Intergenic	L1PA15|LINE|L1	-31648	NM_001365029	54875	Hs.435381	NM_017738	ENSG00000044459	CNTLN	C9orf101|C9orf39|bA340N12.1	centlein	protein-coding
28.3-5	chr4	109516071	109516379	+	0.166667	NA	intron (NM_001300813, intron 11 of 24)	intron (NM_001300813, intron 11 of 24)	27527	NR_030302	693161		NR_030302	ENSG00000207988	MIR576	MIRN576|hsa-mir-576	microRNA 576	ncRNA
43.0667	chr1	55044055	55044555	+	0.166667	NA	intron (NM_174936, intron 2 of 11)	MIRb|SINE|MIR	4083	NR_110451	255738	Hs.18844	NM_174936	ENSG00000169174	PCSK9	FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9	proprotein convertase subtilisin/kexin type 9	protein-coding
58.8334-2	chr12	74633762	74634243	+	0.166667	NA	Intergenic	L1PA15|LINE|L1	96167	NM_001136262	552889	Hs.744849	NM_001136262	ENSG00000253719	ATXN7L3B	lnc-SCA7	ataxin 7 like 3B	protein-coding
46.4001	chr15	67861680	67862009	+	0.166667	NA	Intergenic	AluSz|SINE|Alu	-21799	NR_104088	101954278		NR_104088	ENSG00000202337	RNU6-8	U6-8	RNA, U6 small nuclear 8	snRNA
44.0332	chr16	88990318	88990833	+	0.166667	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	-13368	NM_005187	863	Hs.513811	NM_005187	ENSG00000129993	CBFA2T3	ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4	CBFA2/RUNX1 partner transcriptional co-repressor 3	protein-coding
39.2667	chr14	63861718	63862108	+	0.166667	NA	intron (NM_015180, intron 1 of 114)	L1MC5|LINE|L1	8909	NM_015180	23224	Hs.745014	NM_015180	ENSG00000054654	SYNE2	EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH	spectrin repeat containing nuclear envelope protein 2	protein-coding
42.2-3	chr14	94881995	94882463	+	0.166667	NA	Intergenic	THE1B|LTR|ERVL-MaLR	111587	NR_144432	108868751		NR_144432		GSC-DT	DIGIT	GSC divergent transcript	ncRNA
49.4001-3	chr9	30373470	30373817	+	0.166667	NA	Intergenic	Intergenic	34811	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
11.6667-5	chr14	74193425	74193512	+	0.166667	NA	intron (NM_001024674, intron 5 of 5)	intron (NM_001024674, intron 5 of 5)	-45981	NM_182894	338917	Hs.449771	NM_182894	ENSG00000119614	VSX2	CHX10|HOX10|MCOP2|MCOPCB3|RET1	visual system homeobox 2	protein-coding
36.7333	chr14	45271576	45272049	+	0.166667	NA	Intergenic	Intergenic	-18610	NM_018353	55320	Hs.732769	NM_018353	ENSG00000129534	MIS18BP1	C14orf106|HSA242977|KNL2|M18BP1	MIS18 binding protein 1	protein-coding
32.4667	chr1	219998979	219999370	+	0.166667	NA	intron (NM_004446, intron 17 of 31)	Tigger9a|DNA|TcMar-Tigger	47331	NM_004446	2058	Hs.497788	NM_004446	ENSG00000136628	EPRS	EARS|GLUPRORS|HLD15|PARS|PIG32|QARS|QPRS	glutamyl-prolyl-tRNA synthetase	protein-coding
36.1667-2	chr11	118558518	118558956	+	0.166667	NA	intron (NM_020153, intron 3 of 12)	AluSz6|SINE|Alu	7339	NM_020153	56912	Hs.533738	NM_020153	ENSG00000118096	IFT46	C11orf2|C11orf60|CFAP32	intraflagellar transport 46	protein-coding
15.1-12	chr7	29152687	29152879	+	0.166667	NA	intron (NM_001293069, intron 2 of 13)	intron (NM_001293069, intron 2 of 13)	6236	NM_001293069	1124	Hs.654611	NM_004067	ENSG00000106069	CHN2	ARHGAP3|BCH|CHN2-3|RHOGAP3	chimerin 2	protein-coding
40.5334-3	chr3	174989358	174989848	+	0.166667	NA	intron (NM_207015, intron 1 of 13)	intron (NM_207015, intron 1 of 13)	125639	NR_046390	100862679	Hs.148810	NR_046390	ENSG00000230292	NAALADL2-AS3	-	NAALADL2 antisense RNA 3	ncRNA
58.7667	chr1	116365924	116366698	+	0.166667	NA	Intergenic	Intergenic	-6933	NM_000701	476	Hs.371889	NM_000701	ENSG00000163399	ATP1A1	CMT2DD|HOMGSMR2	ATPase Na+/K+ transporting subunit alpha 1	protein-coding
41.0001-2	chrX	121281993	121282358	+	0.166667	NA	Intergenic	L1PA3|LINE|L1	-88797	NR_037444	100500869		NR_037444	ENSG00000265456	MIR3672	-	microRNA 3672	ncRNA
15.1-19	chrX	114050257	114050409	+	0.166667	NA	Intergenic	MER50|LTR|ERV1	-112115	NR_131204	105463123	Hs.550218	NR_131204		XACT	-	X active specific transcript	ncRNA
24-11	chr3	2901411	2901632	+	0.166667	NA	intron (NM_175607, intron 11 of 24)	intron (NM_175607, intron 11 of 24)	9306	NM_001206956	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
42.0667-5	chr19	28044273	28044742	+	0.166667	NA	Intergenic	Intergenic	-250567	NR_027301	148189	Hs.706547	NR_027301	ENSG00000261824	LINC00662	-	long intergenic non-protein coding RNA 662	ncRNA
23.1333-2	chr15	48728031	48728307	+	0.166667	NA	Intergenic	L1MEi|LINE|L1	-82381	NM_000138	2200	Hs.591133	NM_000138	ENSG00000166147	FBN1	ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2	fibrillin 1	protein-coding
44.0001-2	chr5	44294973	44295288	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	-93602	NR_108034	101927075	Hs.617390	NR_108034	ENSG00000248464	FGF10-AS1	-	FGF10 antisense RNA 1	ncRNA
19.7334-3	chr2	50765895	50766042	+	0.166667	NA	intron (NM_001330093, intron 4 of 22)	intron (NM_001330093, intron 4 of 22)	-69706	NR_130470	103504737		NR_130470	ENSG00000216191	MIR8485	hsa-mir-8485	microRNA 8485	ncRNA
20.7667-3	chr18	780119	780255	+	0.166667	NA	intron (NM_005433, intron 1 of 11)	AluSx|SINE|Alu	32055	NM_005433	7525	Hs.194148	NM_005433	ENSG00000176105	YES1	HsT441|P61-YES|Yes|c-yes	YES proto-oncogene 1, Src family tyrosine kinase	protein-coding
45.0334-2	chr11	60855653	60856227	+	0.166667	NA	promoter-TSS (NM_004778)	promoter-TSS (NM_004778)	10	NM_004778	11251	Hs.299567	NM_004778	ENSG00000183134	PTGDR2	CD294|CRTH2|DL1R|DP2|GPR44	prostaglandin D2 receptor 2	protein-coding
37.6-3	chr17	73583107	73583426	+	0.166667	NA	intron (NM_001144952, intron 1 of 44)	L2c|LINE|L2	61179	NM_001144952	54549	Hs.435719	NM_019064	ENSG00000069188	SDK2	-	sidekick cell adhesion molecule 2	protein-coding
32.5-9	chr7	13361205	13361671	+	0.166667	NA	Intergenic	MER4A1|LTR|ERV1	625076	NM_001163150	2115	Hs.22634	NM_004956	ENSG00000006468	ETV1	ER81	ETS variant 1	protein-coding
68.0333	chr7	114289411	114289953	+	0.166667	NA	intron (NR_033766, intron 2 of 19)	intron (NR_033766, intron 2 of 19)	-125133	NR_033767	93986	Hs.282787	NM_014491	ENSG00000128573	FOXP2	CAGH44|SPCH1|TNRC10	forkhead box P2	protein-coding
41.2999	chr14	31585011	31585437	+	0.166667	NA	intron (NM_001201573, intron 1 of 8)	MER30|DNA|hAT-Charlie	7308	NM_001201573	80224	Hs.288981	NM_025152	ENSG00000151413	NUBPL	C14orf127|IND1|MC1DN21|huInd1	nucleotide binding protein like	protein-coding
48.7333	chr3	1255742	1256139	+	0.166667	NA	intron (NM_001289080, intron 4 of 22)	AluJb|SINE|Alu	162916	NM_001349356	27255	Hs.387300	NM_014461	ENSG00000134115	CNTN6	NB3	contactin 6	protein-coding
48.0666	chr1	235364263	235364657	+	0.166667	NA	Intergenic	AluSg|SINE|Alu	-2900	NM_001287802	6905	Hs.744998	NM_003193	ENSG00000284770	TBCE	HRD|KCS|KCS1|PEAMO|pac2	tubulin folding cofactor E	protein-coding
43.6667-3	chr3	18476886	18477291	+	0.166667	NA	intron (NR_125803, intron 4 of 6)	L1MEd|LINE|L1	-31496	NM_001322874	6304	Hs.517717	NM_002971	ENSG00000182568	SATB1	-	SATB homeobox 1	protein-coding
34.4334	chr1	90808216	90808629	+	0.166667	NA	intron (NR_135038, intron 1 of 2)	intron (NR_135038, intron 1 of 2)	27739	NR_147932	105378853	Hs.546492	NR_135038	ENSG00000233593	LINC02609	-	long intergenic non-protein coding RNA 2609	ncRNA
27.4333-6	chr17	64506695	64506966	+	0.166667	NA	promoter-TSS (NR_133644)	promoter-TSS (NR_133644)	36	NM_001320595	1655	Hs.279806	NM_004396	ENSG00000108654	DDX5	G17P1|HLR1|HUMP68|p68	DEAD-box helicase 5	protein-coding
47.4334	chr1	49243981	49244482	+	0.166667	NA	intron (NM_001323575, intron 4 of 12)	intron (NM_001323575, intron 4 of 12)	-13180	NR_125988	101929721	Hs.639985	NR_125988	ENSG00000230114	LOC101929721	-	uncharacterized LOC101929721	ncRNA
32.5333-8	chr4	157210524	157210745	+	0.166667	NA	Intergenic	ERVL-E-int|LTR|ERVL	-9950	NM_001083619	2891	Hs.32763	NM_000826	ENSG00000120251	GRIA2	GLUR2|GLURB|GluA2|GluR-K2|HBGR2	glutamate ionotropic receptor AMPA type subunit 2	protein-coding
19.3-8	chr3	34271022	34271212	+	0.166667	NA	Intergenic	LTR81|LTR|Gypsy	472487	NM_013374	10015	Hs.475896	NM_013374	ENSG00000170248	PDCD6IP	AIP1|ALIX|DRIP4|HP95	programmed cell death 6 interacting protein	protein-coding
16.8667-4	chr11	37311144	37311321	+	0.166667	NA	Intergenic	L1PA15|LINE|L1	-627369	NR_135110	105376633	Hs.135690	NR_135110	ENSG00000254516	LINC02760	-	long intergenic non-protein coding RNA 2760	ncRNA
29.7-7	chr14	57889000	57889538	+	0.166667	NA	Intergenic	MamRTE1|LINE|RTE-BovB	-23177	NM_001352011	341880	Hs.28280	NM_001080455	ENSG00000151812	SLC35F4	C14orf36|c14_5373	solute carrier family 35 member F4	protein-coding
32.8334	chr12	25976898	25977286	+	0.166667	NA	intron (NM_001164747, intron 1 of 5)	MIRc|SINE|MIR	3337	NM_001164747	11228	Hs.696433	NM_007211	ENSG00000123094	RASSF8	C12orf2|HOJ1	Ras association domain family member 8	protein-coding
60.5333	chr1	24610254	24610669	+	0.166667	NA	Intergenic	MLT1N2|LTR|ERVL-MaLR	-32841	NM_001366595	10250	Hs.18192	NM_005839	ENSG00000133226	SRRM1	160-KD|POP101|SRM160	serine and arginine repetitive matrix 1	protein-coding
54.7001	chr10	111030424	111030867	+	0.166667	NA	Intergenic	L1M1|LINE|L1	41719	NR_031614	100313921		NR_031614	ENSG00000221214	MIR548E	MIRN548E|hsa-mir-548e	microRNA 548e	ncRNA
24.0333-5	chr14	59142782	59143057	+	0.166667	NA	Intergenic	Intergenic	-45748	NM_001270520	23002	Hs.19156	NM_014992	ENSG00000100592	DAAM1	-	dishevelled associated activator of morphogenesis 1	protein-coding
28.2-6	chr12	50039974	50040203	+	0.166667	NA	Intergenic	Intergenic	-14531	NM_001320000	29127	Hs.505469	NM_013277	ENSG00000161800	RACGAP1	CYK4|HsCYK-4|ID-GAP|MgcRacGAP	Rac GTPase activating protein 1	protein-coding
35.4-4	chr12	60457210	60457569	+	0.166667	NA	Intergenic	L1MCc|LINE|L1	768019	NR_073056	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
47.0667-2	chr7	80632541	80633257	+	0.166667	NA	intron (NM_001371077, intron 1 of 14)	intron (NM_001371077, intron 1 of 14)	-5617	NM_001001548	948	Hs.120949	NM_000072	ENSG00000135218	CD36	BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3	CD36 molecule	protein-coding
50.3334	chr10	83117804	83118195	+	0.166667	NA	Intergenic	Intergenic	559090	NR_134317	105378397	Hs.147725	NR_134317		LINC02650	-	long intergenic non-protein coding RNA 2650	ncRNA
34.7667-10	chrX	113705235	113705471	+	0.166667	NA	intron (NR_131204, intron 1 of 2)	L1MC1|LINE|L1	232865	NR_131204	105463123	Hs.550218	NR_131204		XACT	-	X active specific transcript	ncRNA
39.4667-4	chr7	84808258	84808517	+	0.166667	NA	Intergenic	L2a|LINE|L2	275911	NR_110079	101927378	Hs.539042	NR_110079	ENSG00000235139	LOC101927378	-	uncharacterized LOC101927378	ncRNA
23.6333-12	chr9	129629153	129629516	+	0.166667	NA	intron (NM_001286799, intron 1 of 3)	intron (NM_001286799, intron 1 of 3)	2890	NM_001286799	28989	Hs.744027	NM_014064	ENSG00000148335	NTMT1	AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A	N-terminal Xaa-Pro-Lys N-methyltransferase 1	protein-coding
38.6001	chr20	47324837	47325110	+	0.166667	NA	intron (NM_001281774, intron 3 of 23)	AluSx|SINE|Alu	6471	NR_024594	100131496	Hs.662547	NR_024594	ENSG00000267882	LOC100131496	-	uncharacterized LOC100131496	ncRNA
36.2001	chr2	113020383	113020667	+	0.166667	NA	Intergenic	Intergenic	15066	NM_014440	27179	Hs.278910	NM_014440	ENSG00000136694	IL36A	FIL1|FIL1(EPSILON)|FIL1E|IL-1F6|IL1(EPSILON)|IL1F6	interleukin 36 alpha	protein-coding
54.0334-2	chr6	164307792	164308165	+	0.166667	NA	Intergenic	AluSc|SINE|Alu	514085	NR_131926	105378111		NR_131926		MEAT6	-	melanoma-associated transcript 6	ncRNA
45.0667	chr12	117231316	117231748	+	0.166667	NA	intron (NM_001204213, intron 21 of 27)	L1MA3|LINE|L1	-41062	NM_015002	23014	Hs.740376	NM_015002	ENSG00000135108	FBXO21	FBX21	F-box protein 21	protein-coding
54.5999	chr7	92543825	92544556	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	15395	NM_001363366	84060	Hs.21590	NM_032120	ENSG00000127993	RBM48	C7orf64|HSPC304	RNA binding motif protein 48	protein-coding
30.4334-5	chr5	152954676	152954932	+	0.166667	NA	intron (NR_109877, intron 2 of 4)	intron (NR_109877, intron 2 of 4)	17545	NR_109877	101927134	Hs.531423	NR_109877	ENSG00000249484	LINC01470	-	long intergenic non-protein coding RNA 1470	ncRNA
60.7	chr12	53203932	53204545	+	0.166667	NA	intron (NM_000889, intron 1 of 15)	AluSq2|SINE|Alu	3013	NR_104181	3695	Hs.654470	NM_000889	ENSG00000139626	ITGB7	-	integrin subunit beta 7	protein-coding
21-8	chr4	96035981	96036157	+	0.166667	NA	Intergenic	Intergenic	195976	NM_005390	5161	Hs.131361	NM_005390	ENSG00000163114	PDHA2	PDHAL	pyruvate dehydrogenase E1 alpha 2 subunit	protein-coding
27.3-7	chr4	79097799	79097982	+	0.166667	NA	intron (NR_038342, intron 3 of 5)	L1M4a1|LINE|L1	126142	NR_038342	100505875	Hs.480055	NR_038342		LINC01088	-	long intergenic non-protein coding RNA 1088	ncRNA
24.2667-12	chr6	151770943	151771130	+	0.166667	NA	intron (NM_001122742, intron 2 of 9)	intron (NM_001122742, intron 2 of 9)	-34637	NM_001291230	2099	Hs.208124	NM_000125	ENSG00000091831	ESR1	ER|ESR|ESRA|ESTRR|Era|NR3A1	estrogen receptor 1	protein-coding
59.5	chr5	45202171	45202886	+	0.166667	NA	Intergenic	Intergenic	393581	NM_016640	10884	Hs.124165	NM_016640	ENSG00000112996	MRPS30	MRP-S30|PAP|PDCD9|S30mt	mitochondrial ribosomal protein S30	protein-coding
59.5668	chr1	216816335	216816815	+	0.166667	NA	intron (NM_001243513, intron 1 of 7)	intron (NM_001243513, intron 1 of 7)	-11190	NM_001243514	2104	Hs.444225	NM_001438	ENSG00000196482	ESRRG	ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3	estrogen related receptor gamma	protein-coding
44.3-3	chr5	5724954	5725407	+	0.166667	NA	Intergenic	Intergenic	302503	NM_015325	23379	Hs.449296	NM_015325	ENSG00000164151	ICE1	KIAA0947	interactor of little elongation complex ELL subunit 1	protein-coding
27.6667-2	chr1	234444050	234444361	+	0.166667	NA	intron (NM_005646, intron 12 of 29)	intron (NM_005646, intron 12 of 29)	34974	NM_005646	6894	Hs.498115	NM_005646	ENSG00000059588	TARBP1	TRM3|TRMT3|TRP-185|TRP185	TAR (HIV-1) RNA binding protein 1	protein-coding
18.4333-2	chr12	53356629	53356859	+	0.166667	NA	Intergenic	AluJr|SINE|Alu	-11951	NM_001300837	121340	Hs.209402	NM_152860	ENSG00000170374	SP7	OI11|OI12|OSX|osterix	Sp7 transcription factor	protein-coding
28.9667-3	chr18	42114274	42114522	+	0.166667	NA	Intergenic	MIRc|SINE|MIR	-72270	NR_046458	284260	Hs.652819	NR_046174	ENSG00000267586	LINC00907	-	long intergenic non-protein coding RNA 907	ncRNA
32.6667-2	chr11	80005524	80005862	+	0.166667	NA	Intergenic	Intergenic	-564663	NM_001098816	26011	Hs.213087	NM_001098816	ENSG00000149256	TENM4	Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4	teneurin transmembrane protein 4	protein-coding
46.6667-4	chr7	140599468	140599831	+	0.166667	NA	intron (NM_001318052, intron 2 of 18)	intron (NM_001318052, intron 2 of 18)	2893	NR_134477	27147	Hs.6385	NM_015689	ENSG00000146966	DENND2A	FAM31D|KIAA1277	DENN domain containing 2A	protein-coding
82.9668	chr11	88209802	88210360	+	0.166667	NA	Intergenic	Intergenic	33579	NR_036124	100423040		NR_036124	ENSG00000266581	MIR3166	-	microRNA 3166	ncRNA
47.1667	chr20	9125848	9126244	+	0.166667	NA	intron (NM_001172646, intron 1 of 37)	intron (NM_001172646, intron 1 of 37)	56992	NM_001172646	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding
27.6667-6	chr14	40635412	40635581	+	0.166667	NA	Intergenic	L1M1|LINE|L1	-319215	NR_109757	644919	Hs.434414	NR_109757		LINC02315	-	long intergenic non-protein coding RNA 2315	ncRNA
29.2334-2	chr2	124324610	124324850	+	0.166667	NA	intron (NM_130773, intron 3 of 23)	intron (NM_130773, intron 3 of 23)	299443	NM_001367498	129684	Hs.660653	NM_130773	ENSG00000155052	CNTNAP5	caspr5	contactin associated protein like 5	protein-coding
20.6334	chr2	226300529	226300703	+	0.166667	NA	Intergenic	Intergenic	157822	NR_046102	646736	Hs.712836	NR_046102		LOC646736	-	uncharacterized LOC646736	ncRNA
41.9333-5	chr7	66557706	66558062	+	0.166667	NA	intron (NR_111979, intron 3 of 3)	intron (NR_111979, intron 3 of 3)	34523	NR_111979	493754	Hs.732409	NR_002933	ENSG00000229180	GS1-124K5.11	-	RAB guanine nucleotide exchange factor 1 pseudogene	pseudo
41.5	chr1	52954124	52954459	+	0.166667	NA	intron (NM_002979, intron 4 of 15)	AluJb|SINE|Alu	27015	NM_001193617	6342	Hs.476365	NM_002979	ENSG00000116171	SCP2	NLTP|NSL-TP|SCP-2|SCP-CHI|SCP-X|SCPX	sterol carrier protein 2	protein-coding
32.7333-5	chr2	50010655	50010882	+	0.166667	NA	intron (NM_001330093, intron 21 of 22)	intron (NM_001330093, intron 21 of 22)	-36565	NM_001320157	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
23.7667-11	chr2	162462509	162462803	+	0.166667	NA	intron (NM_033272, intron 6 of 15)	intron (NM_033272, intron 6 of 15)	118288	NM_001330270	25801	Hs.377894	NM_012198	ENSG00000115271	GCA	GCL	grancalcin	protein-coding
29.5334-3	chr5	123502966	123503173	+	0.166667	NA	Intergenic	L4_A_Mam|LINE|RTE-X	-9030	NM_001031812	1456	Hs.129206	NM_004384	ENSG00000151292	CSNK1G3	CKI-gamma 3|CSNK1G3L	casein kinase 1 gamma 3	protein-coding
17.2667-2	chr1	70068601	70068798	+	0.166667	NA	intron (NM_001370785, intron 23 of 26)	L1MD1|LINE|L1	136880	NM_017768	55631	Hs.147836	NM_017768	ENSG00000066557	LRRC40	dJ677H15.1	leucine rich repeat containing 40	protein-coding
30.7-5	chr2	128206682	128207024	+	0.166667	NA	Intergenic	L1MEg|LINE|L1	112015	NM_004807	9394	Hs.512841	NM_004807	ENSG00000136720	HS6ST1	HH15|HS6ST	heparan sulfate 6-O-sulfotransferase 1	protein-coding
43.5334	chr10	83105109	83105570	+	0.166667	NA	Intergenic	L2c|LINE|L2	571750	NR_134317	105378397	Hs.147725	NR_134317		LINC02650	-	long intergenic non-protein coding RNA 2650	ncRNA
36.9334	chr5	62349494	62349828	+	0.166667	NA	intron (NM_001098511, intron 3 of 20)	intron (NM_001098511, intron 3 of 20)	43499	NM_001243953	3796	Hs.558351	NM_004520	ENSG00000068796	KIF2A	CDCBM3|HK2|KIF2	kinesin family member 2A	protein-coding
32.0667	chr12	28471673	28471973	+	0.166667	NA	intron (NM_001352082, intron 12 of 13)	AluSz6|SINE|Alu	-281085	NR_148936	729291	Hs.129278	NR_148936		LOC729291	-	uncharacterized LOC729291	ncRNA
20-4	chr17	71386014	71386211	+	0.166667	NA	Intergenic	Intergenic	-183933	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility 17	ncRNA
31.4-15	chr4	104263556	104264001	+	0.166667	NA	Intergenic	L2|LINE|L2	-227187	NR_125926	101929468	Hs.480435	NR_125926	ENSG00000245384	CXXC4-AS1	-	CXXC4 antisense RNA 1	ncRNA
16.5667-7	chr5	91814985	91815241	+	0.166667	NA	Intergenic	L1MD|LINE|L1	-431796	NM_020801	57561	Hs.24684	NM_020801	ENSG00000113369	ARRDC3	TLIMP	arrestin domain containing 3	protein-coding
28.5666-3	chr3	16263304	16263661	+	0.166667	NA	intron (NM_001047434, intron 1 of 1)	intron (NM_001047434, intron 1 of 1)	1461	NM_001047434	285381	Hs.388087	NM_206831	ENSG00000154813	DPH3	DELGIP|DELGIP1|DESR1|DPH3A|KTI11|ZCSL2	diphthamide biosynthesis 3	protein-coding
15.1667-11	chr8	126250361	126250459	+	0.166667	NA	Intergenic	Intergenic	-75085	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA
44.4666-3	chr16	31082386	31083083	+	0.166667	NA	TTS (NM_001039503)	TTS (NM_001039503)	6075	NM_001039503	339105	Hs.569575	NM_001039503	ENSG00000151006	PRSS53	POL3S|UNQ308	serine protease 53	protein-coding
10.7666	chr9	23985175	23985326	+	0.166667	NA	Intergenic	L1MA4|LINE|L1	-134649	NM_001351466	1993	Hs.166109	NM_004432	ENSG00000107105	ELAVL2	HEL-N1|HELN1|HUB	ELAV like RNA binding protein 2	protein-coding
21.8-18	chr8	123385247	123385501	+	0.166667	NA	intron (NM_014109, intron 1 of 27)	Charlie2b|DNA|hAT-Charlie	11073	NM_014109	29028	Hs.370834	NM_014109	ENSG00000156802	ATAD2	ANCCA|CT137|PRO2000	ATPase family AAA domain containing 2	protein-coding
14.9-11	chr5	1176627	1176716	+	0.166667	NA	intron (NR_109911, intron 1 of 4)	intron (NR_109911, intron 1 of 4)	1934	NR_109911	101928857	Hs.593732	NR_109911	ENSG00000249201	CTD-3080P12.3	-	uncharacterized LOC101928857	ncRNA
26.0333	chr1	49651474	49651742	+	0.166667	NA	intron (NR_136623, intron 2 of 12)	L1PA17|LINE|L1	-179523	NR_046839	100874313	Hs.551277	NR_046839	ENSG00000225623	AGBL4-IT1	-	AGBL4 intronic transcript 1	ncRNA
18.4666-6	chr5	58581489	58581740	+	0.166667	NA	promoter-TSS (NM_001317915)	promoter-TSS (NM_001317915)	-538	NM_001317915	115827	Hs.4290	NM_138453	ENSG00000152932	RAB3C	-	RAB3C, member RAS oncogene family	protein-coding
20.1333-9	chr2	21815110	21815272	+	0.166667	NA	Intergenic	Intergenic	-104539	NR_038837	645949	Hs.456782	NR_038837	ENSG00000229621	LINC01822	-	long intergenic non-protein coding RNA 1822	ncRNA
26.4334-3	chr21	31781994	31782274	+	0.166667	NA	Intergenic	L2b|LINE|L2	-50016	NM_001145445	57466	Hs.17255	NM_020706	ENSG00000156304	SCAF4	SFRS15|SRA4	SR-related CTD associated factor 4	protein-coding
25.2-17	chr8	108263512	108263679	+	0.166667	NA	Intergenic	L1ME3B|LINE|L1	-14878	NM_001568	3646	Hs.405590	NM_001568	ENSG00000104408	EIF3E	EIF3-P48|EIF3S6|INT6|eIF3-p46	eukaryotic translation initiation factor 3 subunit E	protein-coding
36.0334-3	chr8	140754356	140754614	+	0.166667	NA	intron (NR_148037, intron 19 of 34)	intron (NR_148037, intron 19 of 34)	-21832	NR_029892	442893		NR_029892	ENSG00000254324	MIR151A	MIR151|MIRN151|hsa-mir-151|hsa-mir-151a	microRNA 151a	ncRNA
29.4334	chr14	28390291	28390746	+	0.166667	NA	Intergenic	L1PB4|LINE|L1	374801	NR_125758	103695363	Hs.569360	NR_125758		FOXG1-AS1	FOXG1-AS	FOXG1 antisense RNA 1	ncRNA
29.8-2	chr11	17425364	17425621	+	0.166667	NA	intron (NR_147094, intron 16 of 37)	L4_C_Mam|LINE|RTE-X	-36146	NM_001166290	3767	Hs.248141	NM_000525	ENSG00000187486	KCNJ11	BIR|HHF2|IKATP|KIR6.2|MODY13|PHHI|TNDM3	potassium voltage-gated channel subfamily J member 11	protein-coding
17.5334	chr6	9536203	9536346	+	0.166667	NA	Intergenic	Intergenic	-868228	NR_145448	109729173		NR_145448	ENSG00000285278	TFAP2A-AS2	HIPSTR	TFAP2A antisense RNA 2	ncRNA
39.6334-2	chr5	57825133	57825575	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	73808	NR_109900	101928539	Hs.639385	NR_109900	ENSG00000249584	LINC02225	-	long intergenic non-protein coding RNA 2225	ncRNA
49.1667-2	chr14	26275937	26276351	+	0.166667	NA	Intergenic	Intergenic	277286	NM_001366398	4857	Hs.31588	NM_002515	ENSG00000139910	NOVA1	Nova-1	NOVA alternative splicing regulator 1	protein-coding
23.6	chr1	207261446	207261749	+	0.166667	NA	Intergenic	Intergenic	-60081	NM_001300902	1604	Hs.126517	NM_000574	ENSG00000196352	CD55	CHAPLE|CR|CROM|DAF|TC	CD55 molecule (Cromer blood group)	protein-coding
59.1999	chr2	31985668	31986114	+	0.166667	NA	intron (NR_126034, intron 1 of 6)	AluJr|SINE|Alu	24773	NR_126032	51072	Hs.444969	NM_015955	ENSG00000162959	MEMO1	C2orf4|CGI-27|MEMO|NS5ATP7	mediator of cell motility 1	protein-coding
20.2-10	chr4	116830242	116830647	+	0.166667	NA	Intergenic	L1PA10|LINE|L1	255132	NM_152402	133022	Hs.570737	NM_152402	ENSG00000174599	TRAM1L1	-	translocation associated membrane protein 1 like 1	protein-coding
37.4667-4	chr2	233410140	233410521	+	0.166667	NA	intron (NM_152879, intron 3 of 29)	intron (NM_152879, intron 3 of 29)	22176	NM_003648	8527	Hs.471675	NM_003648	ENSG00000077044	DGKD	DGKdelta|dgkd-2	diacylglycerol kinase delta	protein-coding
30.4667-6	chr4	48538786	48539025	+	0.166667	NA	intron (NM_015030, intron 47 of 63)	intron (NM_015030, intron 47 of 63)	48653	NM_175619	326340	Hs.276457	NM_175619	ENSG00000182223	ZAR1	Z3CXXC6	zygote arrest 1	protein-coding
30.3667-2	chr1	201582296	201582498	+	0.166667	NA	Intergenic	LTR33A_|LTR|ERVL	62493	NR_026667	376693	Hs.605989	NR_026667		RPS10P7	RPS10_2_147	ribosomal protein S10 pseudogene 7	pseudo
37.7-7	chr7	127730204	127730605	+	0.166667	NA	intron (NM_014390, intron 10 of 23)	intron (NM_014390, intron 10 of 23)	78210	NM_014390	27044	Hs.122523	NM_014390	ENSG00000197157	SND1	TDRD11|Tudor-SN|p100	staphylococcal nuclease and tudor domain containing 1	protein-coding
35.2333-3	chr17	2607527	2607764	+	0.166667	NA	intron (NM_000430, intron 1 of 10)	AluSz|SINE|Alu	13991	NM_000430	5048	Hs.77318	NM_000430	ENSG00000007168	PAFAH1B1	LIS1|LIS2|MDCR|MDS|NudF|PAFAH	platelet activating factor acetylhydrolase 1b regulatory subunit 1	protein-coding
56.2001	chr14	52673173	52673913	+	0.166667	NA	intron (NM_014584, intron 4 of 15)	BLACKJACK|DNA|hAT-Blackjack	22015	NM_014584	30001	Hs.525339	NM_014584	ENSG00000197930	ERO1A	ERO1-L|ERO1-L-alpha|ERO1-alpha|ERO1L|ERO1LA|Ero1alpha	endoplasmic reticulum oxidoreductase 1 alpha	protein-coding
31.5667-6	chr3	36266630	36266867	+	0.166667	NA	Intergenic	Intergenic	-113739	NM_001292049	6769	Hs.56045	NM_003149	ENSG00000144681	STAC	STAC1	SH3 and cysteine rich domain	protein-coding
37.3334-3	chr8	144821894	144822215	+	0.166667	NA	intron (NR_147501, intron 1 of 4)	AluSx1|SINE|Alu	4986	NR_147501	100130027	Hs.639618	NR_147501		LOC100130027	-	uncharacterized LOC100130027	ncRNA
13.3333-9	chr17	63524334	63524494	+	0.166667	NA	intron (NM_030779, intron 2 of 13)	intron (NM_030779, intron 2 of 13)	1056	NM_030779	81033	Hs.591177	NM_030779	ENSG00000173826	KCNH6	ERG-2|ERG2|HERG2|Kv11.2|hERG-2	potassium voltage-gated channel subfamily H member 6	protein-coding
28.8666-2	chr13	31063247	31063452	+	0.166667	NA	Intergenic	MIR|SINE|MIR	98555	NM_001349704	10808	Hs.743267	NM_006644	ENSG00000120694	HSPH1	HSP105|HSP105A|HSP105B|NY-CO-25	heat shock protein family H (Hsp110) member 1	protein-coding
24.6667-3	chr11	65890522	65890778	+	0.166667	NA	promoter-TSS (NM_006848)	promoter-TSS (NM_006848)	-23	NM_006848	11007	Hs.66713	NM_006848	ENSG00000175602	CCDC85B	DIPA	coiled-coil domain containing 85B	protein-coding
45.9667	chr5	29936354	29936720	+	0.166667	NA	Intergenic	LTR49-int|LTR|ERV1	55977	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
29.7-12	chr7	10438933	10439255	+	0.166667	NA	Intergenic	Intergenic	-263582	NR_149037	100131472	Hs.170681	NR_149037		LOC100131472	-	uncharacterized LOC100131472	ncRNA
25.7-9	chr4	54484867	54485283	+	0.166667	NA	Intergenic	Intergenic	122056	NR_134657	339978		NR_134657	ENSG00000250456	LINC02260	-	long intergenic non-protein coding RNA 2260	ncRNA
21.0333-10	chr2	227583290	227583589	+	0.166667	NA	Intergenic	MSTB-int|LTR|ERVL-MaLR	35216	NR_149019	729968	Hs.689550	NR_149019		LOC729968	-	spore coat protein SP96	ncRNA
26.4333-6	chr14	55590164	55590512	+	0.166667	NA	intron (NM_004986, intron 1 of 41)	L1ME3D|LINE|L1	10131	NM_001271014	3895	Hs.509414	NM_004986	ENSG00000126777	KTN1	CG1|KNT|MU-RMS-40.19	kinectin 1	protein-coding
33.4667-8	chr4	59349882	59350321	+	0.166667	NA	Intergenic	L1MCa|LINE|L1	336528	NR_133942	105377247	Hs.298228	NR_133941	ENSG00000251266	LINC02429	-	long intergenic non-protein coding RNA 2429	ncRNA
25.0333	chr1	45493235	45493542	+	0.166667	NA	TTS (NR_033297)	TTS (NR_033297)	-2225	NM_007170	10420	Hs.591499	NM_007170	ENSG00000070759	TESK2	-	testis associated actin remodelling kinase 2	protein-coding
39.4333-7	chr3	108401809	108402247	+	0.166667	NA	intron (NM_014981, intron 34 of 41)	intron (NM_014981, intron 34 of 41)	90243	NM_001282557	11148	Hs.225968	NM_007072	ENSG00000114455	HHLA2	B7-H5|B7-H7|B7H7|B7y	HERV-H LTR-associating 2	protein-coding
51.7334	chr18	74980943	74981499	+	0.166667	NA	intron (NM_017757, intron 7 of 7)	intron (NM_017757, intron 7 of 7)	224292	NM_001306093	284273	Hs.465433	NM_175907	ENSG00000180011	ZADH2	PRG-3	zinc binding alcohol dehydrogenase domain containing 2	protein-coding
36.5667-3	chr4	101399795	101400131	+	0.166667	NA	Intergenic	Intergenic	52186	NR_033874	90024	Hs.534513	NR_033874	ENSG00000254531	FLJ20021	-	uncharacterized LOC90024	ncRNA
46.3666	chr9	98231618	98232110	+	0.166667	NA	intron (NR_051978, intron 3 of 11)	L1MB8|LINE|L1	-2647	NR_106913	102465514		NR_106913	ENSG00000278412	MIR6854	hsa-mir-6854	microRNA 6854	ncRNA
24.6-3	chr16	8463812	8464136	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	125864	NR_110736	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding
34.1-6	chr8	128275346	128275840	+	0.166667	NA	Intergenic	Intergenic	125477	NR_031613	100302281		NR_031613	ENSG00000221261	MIR1208	MIRN1208|hsa-mir-1208	microRNA 1208	ncRNA
29.5999-2	chr17	31000336	31000742	+	0.166667	NA	TTS (NM_032322)	TTS (NM_032322)	-7745	NM_001350575	107984974	Hs.558901	NM_001350575		LOC107984974	-	uncharacterized LOC107984974	protein-coding
32.8667-8	chrX	40955976	40956322	+	0.166667	NA	Intergenic	L1MB7|LINE|L1	-122953	NR_027761	100132831	Hs.729923	NR_027761		LOC100132831	-	A20-binding inhibitor of NF-kappaB activation 2 pseudogene	pseudo
27.0333-12	chr7	132943858	132944158	+	0.166667	NA	intron (NM_001317177, intron 4 of 8)	intron (NM_001317177, intron 4 of 8)	90907	NR_037427	100500804		NR_037427	ENSG00000284135	MIR3654	-	microRNA 3654	ncRNA
26.4	chr1	116277348	116277615	+	0.166667	NA	Intergenic	Intergenic	-95763	NM_000701	476	Hs.371889	NM_000701	ENSG00000163399	ATP1A1	CMT2DD|HOMGSMR2	ATPase Na+/K+ transporting subunit alpha 1	protein-coding
33.1333-5	chr2	85069003	85069349	+	0.166667	NA	Intergenic	AluJo|SINE|Alu	-1829	NR_146453	100996478	Hs.434398	NR_146453	ENSG00000260840	LINC01964	-	long intergenic non-protein coding RNA 1964	ncRNA
23.2-19	chr7	89661663	89661836	+	0.166667	NA	Intergenic	Intergenic	-457651	NR_003551	442523	Hs.406964	NR_003551	ENSG00000235436	DPY19L2P4	-	DPY19L2 pseudogene 4	pseudo
40.7334	chr10	49623243	49623701	+	0.166667	NA	intron (NM_001142929, intron 5 of 14)	L2c|LINE|L2	9435	NM_001142929	1103	Hs.302002	NM_020549	ENSG00000070748	CHAT	CHOACTASE|CMS1A|CMS1A2|CMS6	choline O-acetyltransferase	protein-coding
29-13	chr7	116164922	116165197	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	-45480	NM_015641	26136	Hs.592286	NM_015641	ENSG00000135269	TES	TESS|TESS-2	testin LIM domain protein	protein-coding
30.4-5	chr2	105571548	105571839	+	0.166667	NA	Intergenic	Intergenic	38866	NR_038891	285000	Hs.737917	NR_038891		LOC285000	-	uncharacterized LOC285000	ncRNA
25.4667-3	chr13	76049932	76050084	+	0.166667	NA	Intergenic	L1MEg|LINE|L1	-114876	NR_047491	100861545	Hs.638962	NR_047491	ENSG00000261206	LINC00561	-	long intergenic non-protein coding RNA 561	ncRNA
35.8334	chr1	181175084	181175360	+	0.166667	NA	intron (NR_125966, intron 1 of 2)	MLT1D|LTR|ERVL-MaLR	738	NR_125966	101928973	Hs.637822	NR_125966	ENSG00000237292	LINC01732	-	long intergenic non-protein coding RNA 1732	ncRNA
47.2334	chr1	63795681	63796081	+	0.166667	NA	intron (NM_005012, intron 1 of 8)	intron (NM_005012, intron 1 of 8)	21864	NM_005012	4919	Hs.128753	NM_005012	ENSG00000185483	ROR1	NTRKR1|dJ537F10.1	receptor tyrosine kinase like orphan receptor 1	protein-coding
49.4	chr17	73708154	73708651	+	0.166667	NA	Intergenic	LTR33|LTR|ERVL	-29452	NM_001278587	100134391	Hs.694655	NM_001278587		LOC100134391	-	uncharacterized LOC100134391	protein-coding
59.1334-2	chr6	62139786	62140297	+	0.166667	NA	intron (NR_146874, intron 2 of 13)	intron (NR_146874, intron 2 of 13)	146184	NR_146873	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
39.1999	chr12	16734721	16735101	+	0.166667	NA	Intergenic	Intergenic	-126697	NR_045014	55885	Hs.504908	NM_018640	ENSG00000048540	LMO3	RBTN3|RBTNL2|RHOM3|Rhom-3	LIM domain only 3	protein-coding
26.9334	chr17	18892381	18892649	+	0.166667	NA	intron (NM_001353099, intron 8 of 11)	L1MB5|LINE|L1	27046	NM_001243940	5636	Hs.632236	NM_002767	ENSG00000141127	PRPSAP2	PAP41	phosphoribosyl pyrophosphate synthetase associated protein 2	protein-coding
42.6001	chr19	30415367	30415812	+	0.166667	NA	intron (NM_014717, intron 1 of 4)	(ATC)n|Simple_repeat|Simple_repeat	43205	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding
34.6667-2	chr10	42772755	42773222	+	0.166667	NA	Intergenic	MER52A|LTR|ERV1	-9807	NM_014753	9790	Hs.10848	NM_014753	ENSG00000165733	BMS1	ACC|BMS1L	BMS1 ribosome biogenesis factor	protein-coding
39.3333-8	chr9	14674589	14675258	+	0.166667	NA	intron (NM_178566, intron 3 of 9)	L1ME3|LINE|L1	18509	NR_148718	340481	Hs.649522	NM_178566	ENSG00000175893	ZDHHC21	DHHC-21|DHHC21|DNZ1|HSPC097	zinc finger DHHC-type containing 21	protein-coding
47.5001	chr4	41418921	41419295	+	0.166667	NA	intron (NM_001289122, intron 1 of 25)	intron (NM_001289122, intron 1 of 25)	58301	NM_001330788	22998	Hs.335163	NM_014988	ENSG00000064042	LIMCH1	LIMCH1A|LMO7B	LIM and calponin homology domains 1	protein-coding
43.2-6	chr3	57665407	57665788	+	0.166667	NA	intron (NM_152678, intron 4 of 19)	intron (NM_152678, intron 4 of 19)	27480	NM_152678	201627	Hs.91085	NM_152678	ENSG00000174839	DENND6A	AFI1A|FAM116A	DENN domain containing 6A	protein-coding
33.6001	chrX	9349422	9349643	+	0.166667	NA	Intergenic	Intergenic	-113763	NM_001139467	6907	Hs.495656	NM_005647	ENSG00000101849	TBL1X	EBI|SMAP55|TBL1	transducin beta like 1 X-linked	protein-coding
42.3334	chr1	26925913	26926316	+	0.166667	NA	intron (NM_006600, intron 2 of 8)	AluSp|SINE|Alu	4371	NM_006600	10726	Hs.263812	NM_006600	ENSG00000090273	NUDC	HNUDC|MNUDC|NPD011	nuclear distribution C, dynein complex regulator	protein-coding
41.0667-2	chr15	84971910	84972383	+	0.166667	NA	intron (NM_001321721, intron 16 of 16)	intron (NM_001321721, intron 16 of 16)	-8321	NM_001243137	5151	Hs.9333	NM_002605	ENSG00000073417	PDE8A	HsT19550	phosphodiesterase 8A	protein-coding
19.6334-3	chr9	91238340	91238457	+	0.166667	NA	intron (NM_001698, intron 6 of 9)	MLT1J|LTR|ERVL-MaLR	119336	NR_135306	100129347	Hs.522287	NR_135306	ENSG00000229694	LINC00484	C9orf73	long intergenic non-protein coding RNA 484	ncRNA
39.0334-2	chr7	27622650	27623075	+	0.166667	NA	intron (NR_122122, intron 2 of 2)	L1M2|LINE|L1	6888	NR_122122	790953	Hs.571330	NR_122122		TSL	-	testis-expressed, seven-twelve, leukemia	ncRNA
17.3667-15	chr8	98945668	98945867	+	0.166667	NA	intron (NM_001142462, intron 1 of 3)	intron (NM_001142462, intron 1 of 3)	1325	NM_001142462	116039	Hs.253247	NM_053001	ENSG00000164920	OSR2	-	odd-skipped related transciption factor 2	protein-coding
43.4667-2	chr5	17727501	17727935	+	0.166667	NA	Intergenic	Intergenic	-72080	NM_001355258	391769		NM_001355258	ENSG00000269466	H3.Y	-	histone cluster 2, H3c pseudogene	protein-coding
41.1001	chrX	50100169	50100528	+	0.166667	NA	Intergenic	Intergenic	30847	NM_001282163	1184	Hs.166486	NM_000084	ENSG00000171365	CLCN5	CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2	chloride voltage-gated channel 5	protein-coding
54.1333-2	chr4	120338736	120339321	+	0.166667	NA	Intergenic	MSTA1|LTR|ERVL-MaLR	-272180	NM_002358	4085	Hs.591697	NM_002358	ENSG00000164109	MAD2L1	HSMAD2|MAD2	mitotic arrest deficient 2 like 1	protein-coding
15.6333-8	chr16	60580571	60580812	+	0.166667	NA	Intergenic	Intergenic	-220898	NM_001282301	729159		NM_001282301		NPAP1L	-	nuclear pore associated protein 1 like	protein-coding
26.5667-6	chr15	91141505	91141727	+	0.166667	NA	intron (NM_001323040, intron 2 of 12)	MIRb|SINE|MIR	39820	NM_001323039	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding
27.7-5	chr14	70193377	70193753	+	0.166667	NA	intron (NR_135825, intron 2 of 3)	L1ME3A|LINE|L1	-4495	NM_033262	6547	Hs.337696	NM_033262	ENSG00000100678	SLC8A3	NCX3	solute carrier family 8 member A3	protein-coding
14.9333-7	chr14	72596567	72596733	+	0.166667	NA	Intergenic	L3|LINE|CR1	79830	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA
31.1667	chr10	118756452	118756772	+	0.166667	NA	Intergenic	L1M5|LINE|L1	-1642	NM_153810	143384	Hs.420024	NM_153810	ENSG00000151893	CACUL1	C10orf46|CAC1	CDK2 associated cullin domain 1	protein-coding
19.1-10	chr2	210605401	210605601	+	0.166667	NA	intron (NR_163592, intron 7 of 27)	intron (NR_163592, intron 7 of 27)	-12070	NR_002763	29034	Hs.658398	NR_002763	ENSG00000280837	CPS1-IT1	CPS1-IT|CPS1IT|CPS1IT1|PRO0132	CPS1 intronic transcript 1	ncRNA
46.4001-2	chr3	126570691	126571224	+	0.166667	NA	Intergenic	Intergenic	-12025	NM_152533	152065	Hs.178210	NM_152533	ENSG00000180697	C3orf22	-	chromosome 3 open reading frame 22	protein-coding
33.9666	chr2	227986095	227986433	+	0.166667	NA	intron (NM_030623, intron 10 of 10)	intron (NM_030623, intron 10 of 10)	114633	NM_178821	164781	Hs.424594	NM_178821	ENSG00000123977	DAW1	ODA16|WDR69	dynein assembly factor with WD repeats 1	protein-coding
53.7001	chr13	54254291	54254777	+	0.166667	NA	Intergenic	Intergenic	57514	NR_031628	100302187		NR_031628	ENSG00000283126	MIR1297	MIRN1297|hsa-mir-1297|mir-1297	microRNA 1297	ncRNA
38.6-10	chr7	90907418	90907711	+	0.166667	NA	intron (NM_012395, intron 6 of 13)	intron (NM_012395, intron 6 of 13)	197748	NM_001287137	5218	Hs.258576	NM_012395	ENSG00000058091	CDK14	PFTAIRE1|PFTK1	cyclin dependent kinase 14	protein-coding
43.6334-3	chr2	120811907	120812245	+	0.166667	NA	intron (NM_005270, intron 2 of 13)	intron (NM_005270, intron 2 of 13)	19795	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding
21.1-7	chr4	63882302	63882514	+	0.166667	NA	Intergenic	Intergenic	527042	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
23.6667-9	chr5	148519939	148520181	+	0.166667	NA	intron (NM_001040172, intron 4 of 5)	Tigger17a|DNA|TcMar-Tigger	117001	NM_001040173	3360	Hs.483773	NM_000870	ENSG00000164270	HTR4	5-HT4|5-HT4R	5-hydroxytryptamine receptor 4	protein-coding
33.0333-4	chr16	82764116	82764445	+	0.166667	NA	intron (NM_001220488, intron 2 of 14)	MIRb|SINE|MIR	-9039	NR_110938	101928446	Hs.684007	NR_110938	ENSG00000260862	LOC101928446	-	uncharacterized LOC101928446	ncRNA
23.6-6	chr14	81076144	81076350	+	0.166667	NA	intron (NM_001142626, intron 3 of 8)	L2b|LINE|L2	120626	NM_001018036	7253	Hs.160411	NM_000369	ENSG00000165409	TSHR	CHNG1|LGR3|hTSHR-I	thyroid stimulating hormone receptor	protein-coding
25.1334-2	chr8	117048501	117048775	+	0.166667	NA	intron (NM_001172815, intron 2 of 10)	intron (NM_001172815, intron 2 of 10)	-86357	NM_001172814	169026	Hs.532270	NM_173851	ENSG00000164756	SLC30A8	ZNT8|ZnT-8	solute carrier family 30 member 8	protein-coding
20.4667-6	chr3	87443578	87443708	+	0.166667	NA	Intergenic	Intergenic	-167059	NM_001122757	5449	Hs.591654	NM_000306	ENSG00000064835	POU1F1	CPHD1|GHF-1|PIT1|POU1F1a|Pit-1	POU class 1 homeobox 1	protein-coding
38.3999-4	chr2	86242676	86243223	+	0.166667	NA	intron (NM_001164732, intron 3 of 4)	intron (NM_001164732, intron 3 of 4)	43492	NM_016622	51318	Hs.433439	NM_016622	ENSG00000132313	MRPL35	L35mt|MRP-L35	mitochondrial ribosomal protein L35	protein-coding
40.4333-4	chr21	26532658	26533106	+	0.166667	NA	intron (NR_135515, intron 2 of 3)	Tigger4|DNA|TcMar-Tigger	40404	NM_052954	116159	Hs.37445	NM_052954	ENSG00000166265	CYYR1	C21orf95	cysteine and tyrosine rich 1	protein-coding
49.0334-2	chr11	22218891	22219378	+	0.166667	NA	intron (NM_001142649, intron 4 of 21)	intron (NM_001142649, intron 4 of 21)	25958	NM_213599	203859	Hs.154329	NM_213599	ENSG00000171714	ANO5	GDD1|LGMD2L|LGMDR12|TMEM16E	anoctamin 5	protein-coding
32.7334	chr12	46022673	46022938	+	0.166667	NA	Intergenic	L1PB2|LINE|L1	-32231	NM_004719	9169	Hs.210367	NM_004719	ENSG00000139218	SCAF11	CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP	SR-related CTD associated factor 11	protein-coding
29.2667-3	chr16	28255235	28255709	+	0.166667	NA	Intergenic	Intergenic	-37053	NM_001024401	388228	Hs.97837	NM_001024401	ENSG00000188322	SBK1	SBK	SH3 domain binding kinase 1	protein-coding
32.9667-3	chr4	68070845	68071353	+	0.166667	NA	intron (NM_207407, intron 5 of 9)	intron (NM_207407, intron 5 of 9)	-7802	NR_027094	401135	Hs.130270	NM_001014372		SYT14P1	CHR415SYT|SYT14L|SYTDEP	synaptotagmin 14 pseudogene 1	pseudo
49.0334	chr1	82997634	82998072	+	0.166667	NA	intron (NR_147074, intron 5 of 10)	intron (NR_147074, intron 5 of 10)	-11645	NR_110633	101927498		NR_110632	ENSG00000236268	LINC01361	-	long intergenic non-protein coding RNA 1361	ncRNA
32.4666	chr10	110537927	110538235	+	0.166667	NA	Intergenic	L1MA4|LINE|L1	-29610	NM_005445	9126	Hs.24485	NM_005445	ENSG00000108055	SMC3	BAM|BMH|CDLS3|CSPG6|HCAP|SMC3L1	structural maintenance of chromosomes 3	protein-coding
27.5001	chr7	6276124	6276294	+	0.166667	NA	Intergenic	AluJo|SINE|Alu	-3585	NM_004227	9265	Hs.487479	NM_004227	ENSG00000008256	CYTH3	ARNO3|GRP1|PSCD3|cytohesin-3	cytohesin 3	protein-coding
55.8001	chr3	18988730	18989154	+	0.166667	NA	Intergenic	Intergenic	-159568	NM_144633	131096	Hs.475656	NM_144633	ENSG00000183960	KCNH8	ELK|ELK1|Kv12.1|elk3	potassium voltage-gated channel subfamily H member 8	protein-coding
37.4334-3	chr6	163958513	163958865	+	0.166667	NA	Intergenic	Intergenic	-287205	NR_134620	102724152	Hs.738183	NR_134620		LOC102724152	-	uncharacterized LOC102724152	ncRNA
50.8334	chr7	40164964	40165396	+	0.166667	NA	intron (NM_024728, intron 1 of 14)	intron (NM_024728, intron 1 of 14)	30204	NM_001193312	79783	Hs.586313	NM_024728	ENSG00000175600	SUGCT	C7orf10|DERP13|GA3|ORF19	succinyl-CoA:glutarate-CoA transferase	protein-coding
26.4334	chr16	23762801	23763109	+	0.166667	NA	Intergenic	AluJr|SINE|Alu	7929	NM_022097	63928	Hs.178589	NM_022097	ENSG00000166869	CHP2	-	calcineurin like EF-hand protein 2	protein-coding
23.8334-2	chr3	22670745	22671083	+	0.166667	NA	Intergenic	L2c|LINE|L2	531664	NR_136177	100505877	Hs.125904	NR_136176	ENSG00000233153	UBE2E2-AS1	-	UBE2E2 antisense RNA 1 (head to head)	ncRNA
29.7334	chr10	35014656	35014918	+	0.166667	NA	intron (NM_003591, intron 18 of 20)	AluSz|SINE|Alu	59496	NM_001198778	8453	Hs.82919	NM_003591	ENSG00000108094	CUL2	-	cullin 2	protein-coding
51.1667	chr11	91662708	91663168	+	0.166667	NA	Intergenic	L1MC4a|LINE|L1	-562096	NM_001367949	120114	Hs.98523	NM_001008781	ENSG00000165323	FAT3	CDHF15|CDHR10|hFat3	FAT atypical cadherin 3	protein-coding
66.8334	chr1	234417200	234417754	+	0.166667	NA	intron (NM_005646, intron 22 of 29)	intron (NM_005646, intron 22 of 29)	43776	NM_001301733	388753	Hs.23198	NM_001012985	ENSG00000168275	COA6	C1orf31|CEMCOX4	cytochrome c oxidase assembly factor 6	protein-coding
56.1334-2	chr11	24550427	24550901	+	0.166667	NA	intron (NM_001252008, intron 1 of 11)	L3|LINE|CR1	53611	NM_001252008	338645	Hs.144138	NM_001009909	ENSG00000187398	LUZP2	KFSP2566|PRO6246	leucine zipper protein 2	protein-coding
22.3333-16	chr8	11367692	11368078	+	0.166667	NA	promoter-TSS (NR_026814)	promoter-TSS (NR_026814)	-517	NR_026814	83656	Hs.583896	NM_054017	ENSG00000184608	FAM167A-AS1	C8orf12	FAM167A antisense RNA 1	ncRNA
16.8333-9	chr3	164960802	164961069	+	0.166667	NA	Intergenic	Intergenic	117561	NM_001041	6476	Hs.429596	NM_001041	ENSG00000090402	SI	-	sucrase-isomaltase	protein-coding
28.6667-6	chr3	129123695	129123983	+	0.166667	NA	intron (NM_001204890, intron 11 of 12)	intron (NM_001204890, intron 11 of 12)	-1689	NM_001204883	339122	Hs.381132	NM_198490	ENSG00000172780	RAB43	RAB11B|RAB41	RAB43, member RAS oncogene family	protein-coding
39.1334-3	chr9	34518299	34518735	+	0.166667	NA	intron (NM_001281428, intron 19 of 19)	intron (NM_001281428, intron 19 of 19)	4473	NM_198573	375704	Hs.522085	NM_198573	ENSG00000168913	ENHO	C9orf165|UNQ470	energy homeostasis associated	protein-coding
74.4666	chr7	30361650	30362426	+	0.166667	NA	intron (NM_147128, intron 3 of 4)	intron (NM_147128, intron 3 of 4)	-8012	NR_002186	222161	Hs.112423	NR_002186		DKFZP586I1420	-	uncharacterized protein DKFZp586I1420	pseudo
27.0667-14	chr8	119261600	119261876	+	0.166667	NA	Intergenic	Intergenic	-14881	NR_149112	105375726	Hs.666095	NR_149111		MAL2-AS1	-	MAL2 antisense RNA 1	ncRNA
53.0334	chr6	66383565	66383950	+	0.166667	NA	Intergenic	Intergenic	595878	NR_026540	442229	Hs.390414	NR_026540		SLC25A51P1	MCART3P|bA707M13.1	SLC25A51 pseudogene 1	pseudo
28.2-4	chr11	26553356	26553725	+	0.166667	NA	intron (NM_031418, intron 13 of 26)	intron (NM_031418, intron 13 of 26)	18723	NM_001135092	143662	Hs.407152	NM_145650	ENSG00000169550	MUC15	MUC-15|PAS3|PASIII	mucin 15, cell surface associated	protein-coding
33.5667-5	chr18	43350779	43351082	+	0.166667	NA	Intergenic	Intergenic	-73440	NM_020783	6860	Hs.8059	NM_020783	ENSG00000132872	SYT4	HsT1192	synaptotagmin 4	protein-coding
47.4001	chr2	209674130	209674479	+	0.166667	NA	intron (NM_001039538, intron 5 of 14)	intron (NM_001039538, intron 5 of 14)	94625	NM_002374	4133	Hs.368281	NM_002374	ENSG00000078018	MAP2	MAP-2|MAP2A|MAP2B|MAP2C	microtubule associated protein 2	protein-coding
28.2-7	chr15	39579651	39579931	+	0.166667	NA	Intergenic	Intergenic	-1288	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding
28.3333-18	chrX	13525565	13525881	+	0.166667	NA	Intergenic	Intergenic	-43878	NM_001167890	25975	Hs.12844	NM_015507	ENSG00000198759	EGFL6	MAEG|W80	EGF like domain multiple 6	protein-coding
38.0334-2	chrX	78061109	78061419	+	0.166667	NA	Intergenic	AluSq2|SINE|Alu	-42984	NM_000291	5230	Hs.78771	NM_000291	ENSG00000102144	PGK1	HEL-S-68p|MIG10|PGKA	phosphoglycerate kinase 1	protein-coding
26.2667-3	chr20	23346592	23346804	+	0.166667	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-4093	NM_013248	29107	Hs.516933	NM_013248	ENSG00000132661	NXT1	MTR2|P15	nuclear transport factor 2 like export factor 1	protein-coding
48.3334	chr1	51655208	51655666	+	0.166667	NA	intron (NM_001350209, intron 2 of 23)	MLT1E2|LTR|ERVL-MaLR	38345	NM_001350209	114883	Hs.21938	NM_024586	ENSG00000117859	OSBPL9	ORP-9|ORP9	oxysterol binding protein like 9	protein-coding
39.3-3	chr15	84699835	84700177	+	0.166667	NA	intron (NM_014300, intron 1 of 5)	L1MEc|LINE|L1	16133	NM_014300	23478	Hs.9534	NM_014300	ENSG00000140612	SEC11A	1810012E07Rik|SEC11L1|SPC18|SPCS4A|sid2895	SEC11 homolog A, signal peptidase complex subunit	protein-coding
24.8-6	chr4	42950992	42951386	+	0.166667	NA	intron (NM_001080476, intron 1 of 3)	MLT2B1|LTR|ERVL	57923	NM_001080476	389207	Hs.162559	NM_001080476	ENSG00000215203	GRXCR1	DFNB25|PPP1R88	glutaredoxin and cysteine rich domain containing 1	protein-coding
27.7667-3	chr4	99445153	99445462	+	0.166667	NA	Intergenic	Intergenic	-9797	NM_000673	131	Hs.389	NM_000673	ENSG00000196344	ADH7	ADH4	alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	protein-coding
46.6667-3	chr21	30763467	30763918	+	0.166667	NA	Intergenic	Intergenic	-8264	NM_181619	337977	Hs.567837	NM_181619	ENSG00000187005	KRTAP21-1	KAP21.1	keratin associated protein 21-1	protein-coding
52.5999	chr3	174324600	174324978	+	0.166667	NA	Intergenic	Intergenic	-403993	NR_046664	100874010	Hs.624265	NR_046664	ENSG00000228213	NLGN1-AS1	-	NLGN1 antisense RNA 1	ncRNA
18.7333-12	chr2	75458793	75458988	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	-65178	NR_110281	101927884	Hs.671110	NR_110281	ENSG00000231172	LOC101927884	-	uncharacterized LOC101927884	ncRNA
63.9334	chr2	19183135	19183836	+	0.166667	NA	Intergenic	L1PB3|LINE|L1	-156514	NR_135287	400945	Hs.502854	NR_135287	ENSG00000236204	LINC01376	-	long intergenic non-protein coding RNA 1376	ncRNA
24-6	chr2	104686428	104686677	+	0.166667	NA	Intergenic	Intergenic	71167	NR_038231	284998	Hs.410180	NR_038231	ENSG00000234177	LINC01114	PANCAT	long intergenic non-protein coding RNA 1114	ncRNA
15.4-13	chr2	106914460	106914636	+	0.166667	NA	Intergenic	HERVL-int|LTR|ERVL	-27439	NM_032528	84620	Hs.98265	NM_032528	ENSG00000144057	ST6GAL2	SIAT2|ST6GalII	ST6 beta-galactoside alpha-2,6-sialyltransferase 2	protein-coding
56.3667-3	chr8	132641183	132641750	+	0.166667	NA	intron (NR_135908, intron 1 of 7)	L2a|LINE|L2	34079	NR_135905	23639	Hs.591865	NM_012472	ENSG00000129295	LRRC6	CILD19|LRTP|TSLRP	leucine rich repeat containing 6	protein-coding
47.2333-2	chr8	130725731	130726296	+	0.166667	NA	Intergenic	L1PA8|LINE|L1	-282339	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	protein-coding
21.9333-15	chr4	1571213	1571518	+	0.166667	NA	Intergenic	Intergenic	112626	NM_001013622	152877	Hs.143314	NM_001013622	ENSG00000174137	FAM53A	DNTNP	family with sequence similarity 53 member A	protein-coding
15.9334-3	chr7	89420335	89420451	+	0.166667	NA	Intergenic	Intergenic	-624656	NM_152706	219557	Hs.112877	NM_152706	ENSG00000164645	TEX47	C7orf62	testis expressed 47	protein-coding
35.3-6	chr7	78690163	78690569	+	0.166667	NA	intron (NM_001301128, intron 2 of 20)	intron (NM_001301128, intron 2 of 20)	-318622	NR_046689	100874021	Hs.128252	NR_046689	ENSG00000226978	MAGI2-AS2	-	MAGI2 antisense RNA 2	ncRNA
32.9-10	chr4	173681186	173681588	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	150929	NR_003679	79804	Hs.61435	NR_003679	ENSG00000237125	HAND2-AS1	DEIN|NBLA00301|UPH	HAND2 antisense RNA 1	ncRNA
29.5-3	chr1	165923958	165924353	+	0.166667	NA	Intergenic	Intergenic	16234	NR_037431	100500832		NR_037431	ENSG00000283936	MIR3658	-	microRNA 3658	ncRNA
19.9667-11	chr5	77991456	77991586	+	0.166667	NA	Intergenic	Intergenic	33274	NR_105013	101929154	Hs.252895	NR_105012		LOC101929154	-	uncharacterized LOC101929154	ncRNA
35.3667-6	chr6	144728318	144728687	+	0.166667	NA	intron (NM_007124, intron 52 of 73)	intron (NM_007124, intron 52 of 73)	322847	NR_132778	106635530		NR_132778		SNORA98	-	small nucleolar RNA, H/ACA box 98	snoRNA
32.9-5	chr15	99064104	99064515	+	0.166667	NA	Intergenic	Intergenic	-40771	NM_145728	23336	Hs.207106	NM_015286	ENSG00000182253	SYNM	DMN|SYN	synemin	protein-coding
12	chr11	25855105	25855247	+	0.166667	NA	Intergenic	Intergenic	-333947	NM_001313726	63982	Hs.91791	NM_031418	ENSG00000134343	ANO3	C11orf25|DYT23|DYT24|GENX-3947|TMEM16C	anoctamin 3	protein-coding
50.8333-2	chr2	124717140	124717498	+	0.166667	NA	intron (NM_130773, intron 13 of 23)	intron (NM_130773, intron 13 of 23)	692032	NM_001367498	129684	Hs.660653	NM_130773	ENSG00000155052	CNTNAP5	caspr5	contactin associated protein like 5	protein-coding
27.8667-2	chr12	57919302	57919503	+	0.166667	NA	Intergenic	Intergenic	16762	NR_038269	100506844	Hs.90286	NR_038269		GIHCG	-	GIHCG inhibitor of miR-200b/200a/429 expression	ncRNA
31.3334	chr16	62860834	62861038	+	0.166667	NA	Intergenic	Intergenic	-824498	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
49.1334-4	chr8	140619759	140620327	+	0.166667	NA	intron (NM_001164623, intron 1 of 17)	L1MC4a|LINE|L1	15590	NM_001164623	27161	Hs.660189	NM_012154	ENSG00000123908	AGO2	CASC7|EIF2C2|LINC00980|PPD|Q10	argonaute RISC catalytic component 2	protein-coding
16.5	chr11	79204621	79204814	+	0.166667	NA	intron (NM_001098816, intron 3 of 33)	L1M5|LINE|L1	197392	NR_030598	100126333		NR_030598	ENSG00000211997	MIR708	MIRN708|hsa-mir-708	microRNA 708	ncRNA
74.9998	chr16	87752907	87753754	+	0.166667	NA	intron (NM_001184856, intron 4 of 10)	L1MEc|LINE|L1	12656	NM_017566	54758	Hs.123450	NM_017566	ENSG00000104731	KLHDC4	-	kelch domain containing 4	protein-coding
22.7667-9	chr2	46897577	46897787	+	0.166667	NA	Intergenic	Intergenic	18124	NM_001171509	90411	Hs.662152	NM_139279	ENSG00000180398	MCFD2	F5F8D|F5F8D2|LMAN1IP|SDNSF	multiple coagulation factor deficiency 2	protein-coding
26.7334-2	chr2	100302908	100303217	+	0.166667	NA	intron (NM_198461, intron 2 of 11)	intron (NM_198461, intron 2 of 11)	19671	NM_198461	164832	Hs.21380	NM_198461	ENSG00000170500	LONRF2	RNF192	LON peptidase N-terminal domain and ring finger 2	protein-coding
35.1334	chr12	12722405	12722763	+	0.166667	NA	TTS (NM_004064)	TTS (NM_004064)	-3333	NM_001130415	81575	Hs.23388	NM_030817	ENSG00000178878	APOLD1	VERGE	apolipoprotein L domain containing 1	protein-coding
24.8667-4	chr15	42984740	42984973	+	0.166667	NA	intron (NM_174916, intron 36 of 46)	intron (NM_174916, intron 36 of 46)	-64078	NM_173500	146057	Hs.646511	NM_173500	ENSG00000128881	TTBK2	SCA11|TTBK	tau tubulin kinase 2	protein-coding
49.3667-3	chr8	19063025	19063433	+	0.166667	NA	Intergenic	Intergenic	-49526	NM_015310	23362	Hs.434255	NM_015310	ENSG00000156011	PSD3	EFA6D|EFA6R|HCA67	pleckstrin and Sec7 domain containing 3	protein-coding
25.6667-8	chr4	54113044	54113276	+	0.166667	NA	Intergenic	L1MB3|LINE|L1	12997	NM_133267	170825	Hs.371899	NM_133267	ENSG00000180613	GSX2	GSH2	GS homeobox 2	protein-coding
24.5667-13	chr5	46266139	46266509	+	0.166667	NA	Intergenic	ALR/Alpha|Satellite|centr	-569944	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
21.2333-10	chr4	37394380	37394524	+	0.166667	NA	intron (NM_001144990, intron 3 of 6)	intron (NM_001144990, intron 3 of 6)	-59473	NM_001104629	55286	Hs.107527	NM_018302	ENSG00000154274	C4orf19	-	chromosome 4 open reading frame 19	protein-coding
24.1334-2	chr2	98886257	98886474	+	0.166667	NA	intron (NM_207362, intron 1 of 9)	L1M4|LINE|L1	49860	NM_207362	343990	Hs.469398	NM_207362	ENSG00000196872	KIAA1211L	C2orf55	KIAA1211 like	protein-coding
20.7667-4	chr19	8520089	8520270	+	0.166667	NA	TTS (NM_001348355)	TTS (NM_001348355)	-6012	NM_001146175	84330	Hs.515114	NM_032370	ENSG00000133250	ZNF414	ZFP414	zinc finger protein 414	protein-coding
15.1-5	chr13	32392184	32392392	+	0.166667	NA	intron (NM_000059, intron 24 of 26)	intron (NM_000059, intron 24 of 26)	35842	NM_001353633	90634	Hs.732118	NM_052818	ENSG00000139597	N4BP2L1	CG018	NEDD4 binding protein 2 like 1	protein-coding
50.7-3	chr4	111313460	111314011	+	0.166667	NA	Intergenic	L1MC1|LINE|L1	-453088	NR_030643	100126354		NR_030643	ENSG00000215961	MIR297	MIRN297|hsa-mir-297	microRNA 297	ncRNA
43.8001-2	chr21	31443807	31444079	+	0.166667	NA	intron (NM_001353690, intron 1 of 27)	intron (NM_001353690, intron 1 of 27)	-99589	NM_001353694	7074	Hs.517228	NM_003253	ENSG00000156299	TIAM1	TIAM-1	T cell lymphoma invasion and metastasis 1	protein-coding
33.8667-2	chr10	101064741	101065005	+	0.166667	NA	exon (NM_001319303, exon 5 of 6)	exon (NM_001319303, exon 5 of 6)	-1426	NR_135068	81621	Hs.534859	NM_030929	ENSG00000107821	KAZALD1	BONO1|FKSG28|FKSG40|IGFBP-rP10	Kazal type serine peptidase inhibitor domain 1	protein-coding
64.8333	chr10	52711380	52712145	+	0.166667	NA	intron (NR_155748, intron 1 of 2)	AluSx3|SINE|Alu	43642	NR_155748	105378305	Hs.257871	NR_155748		LOC105378305	-	uncharacterized LOC105378305	ncRNA
49.6001-2	chr5	29614821	29615252	+	0.166667	NA	Intergenic	L1M3|LINE|L1	-219060	NR_104628	101929681	Hs.549659	NR_104628		LINC02064	-	long intergenic non-protein coding RNA 2064	ncRNA
25.4667-10	chr8	72356141	72356370	+	0.166667	NA	Intergenic	Intergenic	-104621	NR_033867	392232	Hs.454043	NR_033867		LOC392232	-	transient receptor potential cation channel subfamily A member 1 pseudogene	pseudo
20.0333-6	chr17	51585714	51585908	+	0.166667	NA	Intergenic	LTR41C|LTR|ERVL	150384	NR_146897	105371828	Hs.640153	NR_146897		LINC02073	-	long intergenic non-protein coding RNA 2073	ncRNA
22.1	chr1	43710796	43711016	+	0.166667	NA	intron (NR_125986, intron 3 of 3)	intron (NR_125986, intron 3 of 3)	3370	NM_001270464	6487	Hs.597915	NM_006279	ENSG00000126091	ST3GAL3	EIEE15|MRT12|SIAT6|ST3GALII|ST3Gal III|ST3GalIII|ST3N	ST3 beta-galactoside alpha-2,3-sialyltransferase 3	protein-coding
35.9667-4	chr2	223979402	223979900	+	0.166667	NA	intron (NM_001136530, intron 7 of 8)	intron (NM_001136530, intron 7 of 8)	22188	NM_022915	65080	Hs.203559	NM_022915	ENSG00000135900	MRPL44	COXPD16|L44MT|MRP-L44	mitochondrial ribosomal protein L44	protein-coding
53.9333-3	chr5	36954835	36955545	+	0.166667	NA	intron (NM_015384, intron 2 of 45)	intron (NM_015384, intron 2 of 45)	78421	NM_015384	25836	Hs.481927	NM_015384	ENSG00000164190	NIPBL	CDLS|CDLS1|IDN3|IDN3-B|Scc2	NIPBL cohesin loading factor	protein-coding
40.1667	chr2	85914549	85914884	+	0.166667	NA	Intergenic	LTR33|LTR|ERVL	25436	NR_110569	101928113	Hs.625888	NR_110569		ST3GAL5-AS1	-	ST3GAL5 antisense RNA 1 (head to head)	ncRNA
28.4667-12	chr7	5352913	5353209	+	0.166667	NA	intron (NM_001080495, intron 16 of 29)	intron (NM_001080495, intron 16 of 29)	70118	NM_153247	222962	Hs.4302	NM_153247	ENSG00000164638	SLC29A4	ENT4|PMAT	solute carrier family 29 member 4	protein-coding
38.1	chr10	31039717	31040060	+	0.166667	NA	Intergenic	Intergenic	-7951	NM_001143766	220929	Hs.660642	NM_182755	ENSG00000183621	ZNF438	bA330O11.1	zinc finger protein 438	protein-coding
31.3667-4	chr19	53685439	53685706	+	0.166667	NA	promoter-TSS (NR_030188)	promoter-TSS (NR_030188)	563	NR_030184	574462		NR_030184	ENSG00000207616	MIR515-1	MIRN515-1	microRNA 515-1	ncRNA
41.6001	chr6	61633989	61634358	+	0.166667	NA	intron (NR_146874, intron 13 of 13)	intron (NR_146874, intron 13 of 13)	60043	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
41.1334	chr16	6763480	6763841	+	0.166667	NA	intron (NM_018723, intron 3 of 15)	intron (NM_018723, intron 3 of 15)	-10149	NM_001142334	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
16.2667-8	chr4	119172034	119172158	+	0.166667	NA	intron (NM_016599, intron 5 of 5)	intron (NM_016599, intron 5 of 5)	36312	NM_016599	51778	Hs.732122	NM_016599	ENSG00000172399	MYOZ2	C4orf5|CMH16|CS-1|FATZ-2	myozenin 2	protein-coding
33.7-5	chr14	62712434	62712703	+	0.166667	NA	intron (NM_172375, intron 9 of 9)	MIR|SINE|MIR	332890	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
23.1-13	chr3	132686114	132686335	+	0.166667	NA	intron (NR_037804, intron 22 of 44)	intron (NR_037804, intron 22 of 44)	25527	NM_001320210	79876	Hs.170737	NM_024818	ENSG00000081307	UBA5	EIEE44|SCAR24|THIFP1|UBE1DC1	ubiquitin like modifier activating enzyme 5	protein-coding
36.9667-2	chr13	64422045	64422366	+	0.166667	NA	Intergenic	MLT1E2|LTR|ERVL-MaLR	-346194	NR_145420	144766	Hs.719557	NR_145420	ENSG00000227674	LINC00355	-	long intergenic non-protein coding RNA 355	ncRNA
33.3001	chr6	137580743	137580999	+	0.166667	NA	Intergenic	Intergenic	-84775	NR_125867	102723649	Hs.129235	NR_125867		LOC102723649	-	uncharacterized LOC102723649	ncRNA
38.0667-2	chr2	145952798	145953197	+	0.166667	NA	Intergenic	L1MA9|LINE|L1	-634060	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
24.5-13	chr5	74823290	74823628	+	0.166667	NA	intron (NR_046462, intron 4 of 11)	L2c|LINE|L2	-42434	NR_134288	441086	Hs.653007	NR_134288		LOC441086	-	uncharacterized LOC441086	ncRNA
55.7334-2	chr10	82841537	82842156	+	0.166667	NA	intron (NR_163252, intron 3 of 8)	intron (NR_163252, intron 3 of 8)	-608926	NR_120666	101929590	Hs.733268	NR_120666	ENSG00000225738	NRG3-AS1	C10orf100|Em:AC010157.1	NRG3 antisense RNA 1	ncRNA
49.2667-2	chr4	27811052	27811546	+	0.166667	NA	Intergenic	AluSc|SINE|Alu	593820	NR_125921	101929199	Hs.570815	NR_125921	ENSG00000249699	LINC02261	-	long intergenic non-protein coding RNA 2261	ncRNA
22.8667-5	chr9	72458084	72458225	+	0.166667	NA	Intergenic	MIR3|SINE|MIR	-63647	NM_138691	117531	Hs.670211	NM_138691	ENSG00000165091	TMC1	DFNA36|DFNB11|DFNB7	transmembrane channel like 1	protein-coding
38.2-6	chr8	117591724	117592068	+	0.166667	NA	Intergenic	Intergenic	71183	NM_080651	90390	Hs.492612	NM_080651	ENSG00000164758	MED30	MED30S|THRAP6|TRAP25	mediator complex subunit 30	protein-coding
31.4-8	chr2	104701278	104701676	+	0.166667	NA	Intergenic	Intergenic	56242	NR_038231	284998	Hs.410180	NR_038231	ENSG00000234177	LINC01114	PANCAT	long intergenic non-protein coding RNA 1114	ncRNA
51.4665	chr6	2753470	2753918	+	0.166667	NA	intron (NM_001347872, intron 1 of 12)	L1MB8|LINE|L1	-2772	NM_001012418	340156	Hs.127830	NM_001012418	ENSG00000145949	MYLK4	SgK085	myosin light chain kinase family member 4	protein-coding
21.5-5	chr19	34777001	34777236	+	0.166667	NA	Intergenic	L1MD|LINE|L1	-3903	NM_001007248	148103	Hs.590961	NM_001007247	ENSG00000153896	ZNF599	-	zinc finger protein 599	protein-coding
60.5001	chr20	43708775	43709372	+	0.166667	NA	intron (NM_001278610, intron 8 of 12)	intron (NM_001278610, intron 8 of 12)	17929	NM_001008901	149699	Hs.447626	NM_176791	ENSG00000124196	GTSF1L	C20orf65|FAM112A|dJ1028D15.4	gametocyte specific factor 1 like	protein-coding
11.0334	chr13	46768022	46768088	+	0.166667	NA	Intergenic	L1ME3A|LINE|L1	29106	NM_001984	2098	Hs.432491	NM_001984	ENSG00000139684	ESD	FGH	esterase D	protein-coding
43.2667-6	chr2	60175385	60175770	+	0.166667	NA	Intergenic	MamRep605|LTR?|LTR?	207459	NR_132991	106660609	Hs.565545	NR_132991	ENSG00000228590	MIR4432HG	-	MIR4432 host gene	ncRNA
26.6-14	chr5	41797899	41798172	+	0.166667	NA	intron (NM_001364299, intron 12 of 17)	intron (NM_001364299, intron 12 of 17)	45622	NM_001364303	5019	Hs.278277	NM_000436	ENSG00000083720	OXCT1	OXCT|SCOT	3-oxoacid CoA-transferase 1	protein-coding
53.0333-4	chr7	19948417	19949199	+	0.166667	NA	intron (NR_110114, intron 5 of 5)	L1PA6|LINE|L1	-175191	NM_001366628	256130	Hs.487670	NM_152774	ENSG00000173452	TMEM196	-	transmembrane protein 196	protein-coding
35.7333-3	chr12	39315816	39316402	+	0.166667	NA	intron (NM_001173464, intron 29 of 37)	intron (NM_001173464, intron 29 of 37)	127011	NM_017641	55605	Hs.374201	NM_017641	ENSG00000139116	KIF21A	CFEOM1|FEOM1|FEOM3A	kinesin family member 21A	protein-coding
50.2333-2	chr5	129708632	129709174	+	0.166667	NA	intron (NM_133638, intron 21 of 22)	intron (NM_133638, intron 21 of 22)	-39191	NM_001257308	100127206	Hs.582534	NM_001257308	ENSG00000186367	MINAR2	KIAA1024L	membrane integral NOTCH2 associated receptor 2	protein-coding
56.5332	chr1	186228664	186229504	+	0.166667	NA	Intergenic	Intergenic	-67189	NM_001127709	10216	Hs.647723	NM_005807	ENSG00000116690	PRG4	CACP|HAPO|JCAP|MSF|SZP	proteoglycan 4	protein-coding
19.8667-3	chr18	7724227	7724414	+	0.166667	NA	intron (NM_002845, intron 1 of 30)	intron (NM_002845, intron 1 of 30)	157004	NM_001105244	5797	Hs.49774	NM_002845	ENSG00000173482	PTPRM	PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu	protein tyrosine phosphatase receptor type M	protein-coding
23.3-14	chr8	95646153	95646324	+	0.166667	NA	intron (NR_038205, intron 2 of 2)	intron (NR_038205, intron 2 of 2)	302110	NR_036611	100500773	Hs.741582	NR_036611		LOC100500773	-	serine and arginine rich splicing factor 3 pseudogene	pseudo
32.1-9	chr7	24890497	24890751	+	0.166667	NA	intron (NR_104111, intron 1 of 21)	intron (NR_104111, intron 1 of 21)	1997	NM_145320	26031	Hs.520259	NM_015550	ENSG00000070882	OSBPL3	ORP-3|ORP3|OSBP3	oxysterol binding protein like 3	protein-coding
17.3333-2	chr11	58043619	58043809	+	0.166667	NA	intron (NM_001005212, intron 1 of 2)	intron (NM_001005212, intron 1 of 2)	12761	NM_001005186	219952	Hs.690432	NM_001005186	ENSG00000279051	OR6Q1	OR11-226	olfactory receptor family 6 subfamily Q member 1 (gene/pseudogene)	protein-coding
21.0334-2	chr16	6402997	6403236	+	0.166667	NA	intron (NM_018723, intron 2 of 15)	intron (NM_018723, intron 2 of 15)	-370693	NM_001142334	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
23.2-17	chr5	53110362	53110585	+	0.166667	NA	promoter-TSS (NM_176806)	promoter-TSS (NM_176806)	631	NR_034107	257396	Hs.12326	NR_034107	ENSG00000247796	LOC257396	-	uncharacterized LOC257396	ncRNA
36.1333-4	chr2	26419618	26420115	+	0.166667	NA	intron (NM_145038, intron 2 of 16)	intron (NM_145038, intron 2 of 16)	17946	NM_145038	92749	Hs.393714	NM_145038	ENSG00000157856	DRC1	C2orf39|CCDC164|CILD21	dynein regulatory complex subunit 1	protein-coding
18.4334	chr2	223961361	223961476	+	0.166667	NA	intron (NM_022915, intron 2 of 3)	intron (NM_022915, intron 2 of 3)	3955	NM_022915	65080	Hs.203559	NM_022915	ENSG00000135900	MRPL44	COXPD16|L44MT|MRP-L44	mitochondrial ribosomal protein L44	protein-coding
53.4001	chr17	55700414	55700898	+	0.166667	NA	Intergenic	Intergenic	22208	NM_018286	55273	Hs.173233	NM_018286	ENSG00000166292	TMEM100	-	transmembrane protein 100	protein-coding
17.5667-9	chr3	162426681	162426889	+	0.166667	NA	Intergenic	LTR37B|LTR|ERV1	876516	NR_033945	647107	Hs.408584	NR_033945	ENSG00000241369	LINC01192	CT64	long intergenic non-protein coding RNA 1192	ncRNA
33.5-4	chr5	24513778	24514116	+	0.166667	NA	intron (NM_001362460, intron 5 of 9)	L2a|LINE|L2	131031	NM_001362460	1008	Hs.92489	NM_006727	ENSG00000040731	CDH10	-	cadherin 10	protein-coding
15.7-2	chr10	100524566	100524702	+	0.166667	NA	intron (NM_001284367, intron 4 of 4)	intron (NM_001284367, intron 4 of 4)	-4773	NM_015490	25956	Hs.18889	NM_015490	ENSG00000075826	SEC31B	SEC31B-1|SEC31L2	SEC31 homolog B, COPII coat complex component	protein-coding
39.3667-3	chr8	116107520	116108109	+	0.166667	NA	intron (NR_046215, intron 7 of 13)	LTR78B|LTR|ERV1	217245	NR_046215	100859921	Hs.552281	NR_046215	ENSG00000249917	LINC00536	-	long intergenic non-protein coding RNA 536	ncRNA
18.9-16	chr8	26339259	26339402	+	0.166667	NA	intron (NM_001177591, intron 3 of 9)	intron (NM_001177591, intron 3 of 9)	43623	NR_144550	157489	Hs.586388	NR_144550	ENSG00000228451	SDAD1P1	-	SDA1 domain containing 1 pseudogene 1	pseudo
33.3667-3	chr5	145139239	145139501	+	0.166667	NA	Intergenic	L1MA1|LINE|L1	695972	NM_182960	153768	Hs.314261	NM_138492	ENSG00000186314	PRELID2	-	PRELI domain containing 2	protein-coding
49.3333-4	chr8	134824887	134825221	+	0.166667	NA	Intergenic	Intergenic	-13015	NR_126028	552853	Hs.575612	NR_126028	ENSG00000253433	NCRNA00250	C8orf24	non-protein coding RNA 250	ncRNA
39-6	chr3	76266865	76267287	+	0.166667	NA	Intergenic	Intergenic	-481527	NM_001324026	100131827	Hs.556877	NM_001128223	ENSG00000227124	ZNF717	OB1|X17|ZNF838	zinc finger protein 717	protein-coding
19.6-2	chr12	96812223	96812363	+	0.166667	NA	intron (NM_001306084, intron 64 of 67)	intron (NM_001306084, intron 64 of 67)	-94964	NM_001135177	121441	Hs.270084	NM_152905	ENSG00000139350	NEDD1	GCP-WD|TUBGCP7	NEDD1 gamma-tubulin ring complex targeting factor	protein-coding
56.5666-2	chr8	129030470	129031013	+	0.166667	NA	Intergenic	Intergenic	-64740	NR_145483	106144608		NR_145483	ENSG00000229140	LINC00976	-	long intergenic non-protein coding RNA 976	ncRNA
34.4333	chr10	86751175	86751459	+	0.166667	NA	Intergenic	Intergenic	-5322	NM_004329	657	Hs.524477	NM_004329	ENSG00000107779	BMPR1A	10q23del|ACVRLK3|ALK3|CD292|SKR5	bone morphogenetic protein receptor type 1A	protein-coding
28.8667-6	chr7	125113971	125114376	+	0.166667	NA	intron (NR_125719, intron 5 of 7)	GA-rich|Low_complexity|Low_complexity	-70396	NR_110188	101928283	Hs.566650	NR_110188	ENSG00000224897	LOC101928283	-	uncharacterized LOC101928283	ncRNA
18.7-11	chr9	87957914	87958206	+	0.166667	NA	Intergenic	Intergenic	16473	NM_001170639	23552	Hs.522274	NM_012119	ENSG00000156345	CDK20	CCRK|CDCH|P42|PNQALRE	cyclin dependent kinase 20	protein-coding
27.1667-4	chr17	77096869	77097079	+	0.166667	NA	intron (NM_001204410, intron 2 of 17)	intron (NM_001204410, intron 2 of 17)	7557	NR_106997	102466864		NR_106997	ENSG00000284250	MIR6516	hsa-mir-6516	microRNA 6516	ncRNA
55.7334	chr10	30910396	30911046	+	0.166667	NA	intron (NM_182755, intron 3 of 7)	intron (NM_182755, intron 3 of 7)	88796	NM_001143769	220929	Hs.660642	NM_182755	ENSG00000183621	ZNF438	bA330O11.1	zinc finger protein 438	protein-coding
29.1-9	chr6	68808806	68809160	+	0.166667	NA	intron (NM_001704, intron 3 of 31)	MER5A|DNA|hAT-Charlie	173701	NM_001704	577	Hs.13261	NM_001704	ENSG00000135298	ADGRB3	BAI3	adhesion G protein-coupled receptor B3	protein-coding
20.1667-3	chr15	94201015	94201208	+	0.166667	NA	Intergenic	MER68|LTR|ERVL	-93173	NR_120320	101927112	Hs.134687	NR_120320	ENSG00000259724	LINC01581	-	long intergenic non-protein coding RNA 1581	ncRNA
53.7334	chr11	30485766	30486299	+	0.166667	NA	intron (NM_001584, intron 3 of 5)	intron (NM_001584, intron 3 of 5)	94461	NM_001584	744	Hs.289795	NM_001584	ENSG00000066382	MPPED2	239FB|C11orf8	metallophosphoesterase domain containing 2	protein-coding
39.4333-5	chr17	8025669	8025931	+	0.166667	NA	Intergenic	Intergenic	-13240	NM_001039130	247	Hs.111256	NM_001141	ENSG00000179593	ALOX15B	15-LOX-2	arachidonate 15-lipoxygenase type B	protein-coding
72.6667-2	chr6	26336414	26337034	+	0.166667	NA	Intergenic	Intergenic	-28435	NM_001197248	11118	Hs.376046	NM_007047	ENSG00000186470	BTN3A2	BT3.2|BTF4|BTN3.2|CD277	butyrophilin subfamily 3 member A2	protein-coding
22.9667-9	chr6	45196729	45196881	+	0.166667	NA	TTS (NR_030313)	TTS (NR_030313)	965	NR_030313	693171		NR_030313	ENSG00000207769	MIR586	MIRN586|hsa-mir-586	microRNA 586	ncRNA
24.6-15	chr9	98855764	98855932	+	0.166667	NA	Intergenic	L1M4a1|LINE|L1	48178	NM_024642	79695	Hs.47099	NM_024642	ENSG00000119514	GALNT12	CRCS1|GalNAc-T12	polypeptide N-acetylgalactosaminyltransferase 12	protein-coding
29.2667-7	chr20	49215110	49215329	+	0.166667	NA	intron (NM_001319135, intron 1 of 14)	L2a|LINE|L2	-4076	NM_001348187	55661	Hs.65234	NM_017895	ENSG00000124228	DDX27	DRS1|Drs1p|HSPC259|PP3241|RHLP|dJ686N3.1	DEAD-box helicase 27	protein-coding
26.6-19	chr9	6553276	6553497	+	0.166667	NA	exon (NM_000170, exon 20 of 25)	exon (NM_000170, exon 20 of 25)	92306	NM_000170	2731	Hs.584238	NM_000170	ENSG00000178445	GLDC	GCE|GCSP|HYGN1	glycine decarboxylase	protein-coding
22.6-4	chr13	67988413	67988634	+	0.166667	NA	Intergenic	L2a|LINE|L2	616136	NR_130792	100874145	Hs.508194	NR_130792	ENSG00000230040	LINC00364	LncRNA00364	long intergenic non-protein coding RNA 364	ncRNA
41.5334	chr11	63896829	63897271	+	0.166667	NA	intron (NM_001163296, intron 3 of 16)	intron (NM_001163296, intron 3 of 16)	8513	NM_017490	2011	Hs.567261	NM_004954	ENSG00000072518	MARK2	EMK-1|EMK1|PAR-1|Par-1b|Par1b	microtubule affinity regulating kinase 2	protein-coding
11.9334	chr1	200805845	200805954	+	0.166667	NA	intron (NM_001297707, intron 2 of 17)	intron (NM_001297707, intron 2 of 17)	66327	NM_203459	23271	Hs.23585	NM_203459	ENSG00000118200	CAMSAP2	CAMSAP1L1	calmodulin regulated spectrin associated protein family member 2	protein-coding
16.8667	chr1	111789080	111789247	+	0.166667	NA	intron (NM_172198, intron 2 of 6)	L3|LINE|CR1	33262	NM_007204	11218	Hs.591405	NM_007204	ENSG00000064703	DDX20	DP103|GEMIN3	DEAD-box helicase 20	protein-coding
23.2667-10	chr6	141879090	141879267	+	0.166667	NA	Intergenic	Intergenic	209621	NM_002511	4829	Hs.552106	NM_002511	ENSG00000135577	NMBR	BB1|BB1R|NMB-R	neuromedin B receptor	protein-coding
38.8333	chr12	118294714	118295012	+	0.166667	NA	intron (NM_001346490, intron 1 of 21)	L2|LINE|L2	64842	NM_001346489	51347	Hs.644420	NM_016281	ENSG00000135090	TAOK3	DPK|JIK|MAP3K18|hKFC-A	TAO kinase 3	protein-coding
36.3334	chr18	40798008	40798345	+	0.166667	NA	Intergenic	L1MA9|LINE|L1	722501	NR_002838	641516	Hs.116612	NR_002838	ENSG00000267313	KC6	-	keratoconus gene 6	ncRNA
33.7667-7	chr2	125991595	125991927	+	0.166667	NA	Intergenic	L1MA3|LINE|L1	126224	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
20.9-9	chr18	70032977	70033162	+	0.166667	NA	intron (NM_001318520, intron 39 of 47)	MSTA|LTR|ERVL-MaLR	-76270	NM_006566	10666	Hs.660130	NM_006566	ENSG00000150637	CD226	DNAM-1|DNAM1|PTA1|TLiSA1	CD226 molecule	protein-coding
36.2333	chr21	28282560	28283080	+	0.166667	NA	Intergenic	MIRc|SINE|MIR	-54153	NR_126012	101927973	Hs.570414	NR_126012	ENSG00000236532	LINC01695	-	long intergenic non-protein coding RNA 1695	ncRNA
17-9	chr5	8912660	8912847	+	0.166667	NA	Intergenic	Charlie1|DNA|hAT-Charlie	73021	NR_109932	101929284	Hs.403715	NR_109932		LINC02199	-	long intergenic non-protein coding RNA 2199	ncRNA
51.3001-2	chr2	85793651	85793961	+	0.166667	NA	Intergenic	MER103C|DNA|hAT-Charlie	-10129	NR_106719	102466516		NR_106719	ENSG00000278783	MIR6071	hsa-mir-6071	microRNA 6071	ncRNA
24.7667-9	chr7	112133074	112133275	+	0.166667	NA	intron (NM_001363540, intron 1 of 52)	intron (NM_001363540, intron 1 of 52)	73225	NM_014705	9732	Hs.654652	NM_014705	ENSG00000128512	DOCK4	-	dedicator of cytokinesis 4	protein-coding
46.3334	chr12	91664492	91665053	+	0.166667	NA	Intergenic	Intergenic	476941	NR_046159	256021	Hs.651357	NM_001256373	ENSG00000257242	LINC01619	C12orf79	long intergenic non-protein coding RNA 1619	ncRNA
27.1-10	chr6	34603322	34603706	+	0.166667	NA	intron (NM_022758, intron 3 of 3)	AluSc8|SINE|Alu	-47181	NM_001252294	25803	Hs.485158	NM_012391	ENSG00000124664	SPDEF	PDEF|bA375E1.3	SAM pointed domain containing ETS transcription factor	protein-coding
35.3667-5	chr6	129099328	129099746	+	0.166667	NA	intron (NM_000426, intron 4 of 64)	intron (NM_000426, intron 4 of 64)	216396	NM_000426	3908	Hs.200841	NM_000426	ENSG00000196569	LAMA2	LAMM|MDC1A	laminin subunit alpha 2	protein-coding
22.6667-9	chr8	106166728	106166881	+	0.166667	NA	Intergenic	Intergenic	-103374	NM_001198533	55074	Hs.127286	NM_018002	ENSG00000164830	OXR1	Nbla00307|TLDC3	oxidation resistance 1	protein-coding
61.8	chr2	185606061	185606849	+	0.166667	NA	Intergenic	Intergenic	132264	NR_110215	101927196	Hs.244783	NR_110214	ENSG00000226747	FSIP2-AS2	-	FSIP2 antisense RNA 2	ncRNA
33.1666	chr11	31206780	31207067	+	0.166667	NA	intron (NM_001367979, intron 9 of 38)	Charlie4a|DNA|hAT-Charlie	162816	NM_181807	341019	Hs.127405	NM_020869	ENSG00000170959	DCDC1	DCDC5	doublecortin domain containing 1	protein-coding
15.9-12	chr8	21344387	21344571	+	0.166667	NA	Intergenic	MIR|SINE|MIR	46240	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA
44.3333	chr15	85638522	85638887	+	0.166667	NA	intron (NM_001270546, intron 1 of 28)	intron (NM_001270546, intron 1 of 28)	18754	NM_001270546	11214	Hs.459211	NM_006738	ENSG00000170776	AKAP13	AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47	A-kinase anchoring protein 13	protein-coding
48.0334	chr3	31647706	31648160	+	0.166667	NA	Intergenic	L1MA4A|LINE|L1	-56280	NR_049771	100874206	Hs.662428	NR_049771	ENSG00000232490	OSBPL10-AS1	-	OSBPL10 antisense RNA 1	ncRNA
31.8334	chr5	144755587	144755998	+	0.166667	NA	Intergenic	Intergenic	550401	NM_001370486	57528	Hs.7093	NM_020768	ENSG00000183775	KCTD16	-	potassium channel tetramerization domain containing 16	protein-coding
45.7666-5	chr7	68630443	68630776	+	0.166667	NA	Intergenic	L2-3_Crp|LINE|L2	610356	NR_120514	102723427	Hs.583491	NR_120514	ENSG00000225209	LOC102723427	-	uncharacterized LOC102723427	ncRNA
44.1667	chr11	66740139	66740621	+	0.166667	NA	Intergenic	Intergenic	-4356	NM_024650	79703	Hs.292088	NM_024650	ENSG00000173715	C11orf80	HYDM4|TOP6BL|TOPOVIBL	chromosome 11 open reading frame 80	protein-coding
35.7667-4	chr16	77109541	77109924	+	0.166667	NA	Intergenic	Intergenic	-81458	NM_001286640	22879	Hs.513743	NM_014940	ENSG00000103111	MON1B	HSRG1|SAND2|SRG1	MON1 homolog B, secretory trafficking associated	protein-coding
30.7001-2	chr4	175477877	175478087	+	0.166667	NA	Intergenic	MER4A1|LTR|ERV1	309694	NM_001261448	2823	Hs.75819	NM_005277	ENSG00000150625	GPM6A	GPM6|M6A	glycoprotein M6A	protein-coding
27.7334-2	chr5	31420209	31420388	+	0.166667	NA	intron (NM_013235, intron 29 of 34)	intron (NM_013235, intron 29 of 34)	111795	NM_013235	29102	Hs.97997	NM_013235	ENSG00000113360	DROSHA	ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN	drosha ribonuclease III	protein-coding
28.4-2	chr10	107628917	107629102	+	0.166667	NA	Intergenic	L1ME1|LINE|L1	440284	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
53.7333	chr12	9144747	9145151	+	0.166667	NA	Intergenic	LTR19A|LTR|ERV1	-28720	NM_001347423	2	Hs.88556	NM_000014	ENSG00000175899	A2M	A2MD|CPAMD5|FWP007|S863-7	alpha-2-macroglobulin	protein-coding
33.9666-2	chr3	169169868	169170157	+	0.166667	NA	intron (NM_001205194, intron 1 of 15)	intron (NM_001205194, intron 1 of 15)	-22541	NM_001366470	2122	Hs.656395	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding
34.4666-4	chr5	86575683	86576172	+	0.166667	NA	Intergenic	L1MDa|LINE|L1	-42014	NM_001867	1350	Hs.430075	NM_001867	ENSG00000127184	COX7C	-	cytochrome c oxidase subunit 7C	protein-coding
19.4-11	chr20	34388432	34388625	+	0.166667	NA	intron (NM_001257137, intron 2 of 25)	AluJb|SINE|Alu	25255	NM_001324198	83737	Hs.632272	NM_031483	ENSG00000078747	ITCH	ADMFD|AIF4|AIP4|NAPP1	itchy E3 ubiquitin protein ligase	protein-coding
58.7	chr2	80065563	80066099	+	0.166667	NA	intron (NM_001282598, intron 7 of 17)	intron (NM_001282598, intron 7 of 17)	-199248	NR_107047	102465877		NR_107047	ENSG00000276917	MIR8080	hsa-mir-8080	microRNA 8080	ncRNA
53.2	chr4	116242703	116243385	+	0.166667	NA	Intergenic	HERVL40-int|LTR|ERVL	-56681	NR_031737	100302290		NR_031737	ENSG00000284253	MIR1973	hsa-mir-1973|mir-1973	microRNA 1973	ncRNA
35.0334-2	chr12	69025535	69025925	+	0.166667	NA	Intergenic	Intergenic	-62490	NM_001874	1368	Hs.654387	NM_001874	ENSG00000135678	CPM	-	carboxypeptidase M	protein-coding
33.8667-6	chr14	52731704	52732092	+	0.166667	NA	intron (NM_001130701, intron 2 of 11)	AluJb|SINE|Alu	1732	NM_001130701	6815	Hs.364980	NM_145251	ENSG00000198252	STYX	-	serine/threonine/tyrosine interacting protein	protein-coding
33.9667	chr8	93296691	93296924	+	0.166667	NA	Intergenic	Intergenic	-129957	NR_161372	389676	Hs.386711	NR_161372		C8orf87	-	chromosome 8 open reading frame 87	ncRNA
13.2667-8	chr3	194290342	194290459	+	0.166667	NA	Intergenic	L1MD2|LINE|L1	22404	NR_024480	100131551	Hs.128066	NR_024480	ENSG00000214145	LINC00887	HEIRCC	long intergenic non-protein coding RNA 887	ncRNA
40.9667	chr18	3334509	3334827	+	0.166667	NA	Intergenic	MER31-int|LTR|ERV1	15891	NR_146506	105371964	Hs.105326	NR_146506	ENSG00000259256	LINC01895	-	long intergenic non-protein coding RNA 1895	ncRNA
30.6667-8	chr3	32657919	32658247	+	0.166667	NA	Intergenic	Intergenic	-27105	NM_015442	25904	Hs.444851	NM_015442	ENSG00000182973	CNOT10	-	CCR4-NOT transcription complex subunit 10	protein-coding
21.9334-3	chr6	41876120	41876320	+	0.166667	NA	intron (NM_018561, intron 2 of 6)	MIRc|SINE|MIR	-4583	NM_001286554	25862	Hs.593575	NM_018561	ENSG00000164663	USP49	-	ubiquitin specific peptidase 49	protein-coding
38	chr10	62805739	62806180	+	0.166667	NA	3' UTR (NM_032804, exon 1 of 1)	3' UTR (NM_032804, exon 1 of 1)	1239	NM_032804	84890	Hs.99821	NM_032804	ENSG00000181915	ADO	C10orf22	2-aminoethanethiol dioxygenase	protein-coding
27.0667-3	chr12	38749212	38749524	+	0.166667	NA	intron (NM_153634, intron 10 of 19)	THE1B|LTR|ERVL-MaLR	156223	NM_153634	144402	Hs.40910	NM_153634	ENSG00000139117	CPNE8	-	copine 8	protein-coding
24.7-8	chr2	200877141	200877353	+	0.166667	NA	intron (NM_130906, intron 5 of 6)	FLAM_C|SINE|Alu	11830	NM_032472	53938	Hs.121076	NM_032472	ENSG00000240344	PPIL3	CYPJ	peptidylprolyl isomerase like 3	protein-coding
30.5333-2	chr1	225720732	225721029	+	0.166667	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-56933	NM_001130440	6726	Hs.511425	NM_003133	ENSG00000143742	SRP9	ALURBP	signal recognition particle 9	protein-coding
41.2667-2	chr14	48196957	48197333	+	0.166667	NA	Intergenic	Charlie15b|DNA|hAT-Charlie	-402131	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
51.3001	chr14	62458344	62458847	+	0.166667	NA	Intergenic	MIR|SINE|MIR	-318622	NR_104063	101954204	Hs.607093	NR_104063	ENSG00000259142	LINC00644	-	long intergenic non-protein coding RNA 644	ncRNA
29.9334-2	chr22	49930058	49930409	+	0.166667	NA	Intergenic	MER20|DNA|hAT-Charlie	11599	NM_001135101	79174	Hs.211282	NM_024324	ENSG00000184164	CRELD2	-	cysteine rich with EGF like domains 2	protein-coding
50.4667-3	chr20	39581931	39582515	+	0.166667	NA	Intergenic	L1M6|LINE|L1	-357475	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA
25.3667-5	chr7	104466436	104466709	+	0.166667	NA	intron (NM_199000, intron 1 of 2)	intron (NM_199000, intron 1 of 2)	137916	NM_199000	375612	Hs.659164	NM_199000	ENSG00000187416	LHFPL3	LHFPL4	LHFPL tetraspan subfamily member 3	protein-coding
40.4334-2	chr3	105356833	105357227	+	0.166667	NA	Intergenic	Intergenic	-9683	NM_001243281	214	Hs.591293	NM_001627	ENSG00000170017	ALCAM	CD166|MEMD	activated leukocyte cell adhesion molecule	protein-coding
33.4334	chr7	121952149	121952503	+	0.166667	NA	intron (NM_001206839, intron 2 of 28)	AluJr|SINE|Alu	79165	NM_001206839	5803	Hs.489824	NM_002851	ENSG00000106278	PTPRZ1	HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan	protein tyrosine phosphatase receptor type Z1	protein-coding
16.7333-2	chr10	120508493	120508655	+	0.166667	NA	intron (NM_001318169, intron 2 of 2)	intron (NM_001318169, intron 2 of 2)	51620	NM_001318168	196051	Hs.40479	NM_001030059	ENSG00000203805	PLPP4	DPPL2|PPAPDC1|PPAPDC1A	phospholipid phosphatase 4	protein-coding
27.8667-7	chr21	27176943	27177246	+	0.166667	NA	Intergenic	Intergenic	-210006	NM_007038	11096	Hs.58324	NM_007038	ENSG00000154736	ADAMTS5	ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2	ADAM metallopeptidase with thrombospondin type 1 motif 5	protein-coding
59.3	chr14	76292966	76293533	+	0.166667	NA	Intergenic	Intergenic	-78098	NM_004452	2103	Hs.435845	NM_004452	ENSG00000119715	ESRRB	DFNB35|ERR2|ERRb|ESRL2|NR3B2	estrogen related receptor beta	protein-coding
57.8334	chr2	175092445	175092884	+	0.166667	NA	intron (NR_045773, intron 11 of 13)	A-rich|Low_complexity|Low_complexity	75045	NR_030630	100126350		NR_030630	ENSG00000215973	MIR933	MIRN933|hsa-mir-933|mir-933	microRNA 933	ncRNA
34.6-4	chr12	2193943	2194259	+	0.166667	NA	intron (NM_199460, intron 3 of 49).2	(CCT)n|Simple_repeat|Simple_repeat	29380	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA
56.8666-2	chr8	74077298	74077692	+	0.166667	NA	Intergenic	L1MC5a|LINE|L1	86103	NM_015364	23643	Hs.726603	NM_015364	ENSG00000154589	LY96	ESOP-1|MD-2|MD2|ly-96	lymphocyte antigen 96	protein-coding
28.2667-5	chr2	178066586	178066949	+	0.166667	NA	intron (NM_001077197, intron 2 of 20)	MER45C|DNA|hAT-Tip100	6010	NM_016953	50940	Hs.570273	NM_016953	ENSG00000128655	PDE11A	PPNAD2	phosphodiesterase 11A	protein-coding
35.5	chr1	75439955	75440321	+	0.166667	NA	intron (NM_001320285, intron 2 of 25)	L2a|LINE|L2	170976	NM_001130058	204962	Hs.654821	NM_152697	ENSG00000137968	SLC44A5	CTL5	solute carrier family 44 member 5	protein-coding
25.9334-2	chr2	28291594	28291749	+	0.166667	NA	intron (NM_199193, intron 11 of 13)	intron (NM_199193, intron 11 of 13)	18788	NR_038319	100505716	Hs.679092	NR_038319	ENSG00000223522	LOC100505716	-	uncharacterized LOC100505716	ncRNA
40.7334-2	chr2	114557975	114558433	+	0.166667	NA	intron (NM_001321908, intron 2 of 25)	intron (NM_001321908, intron 2 of 25)	96627	NM_001321908	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
33.0667-3	chr7	119716096	119716466	+	0.166667	NA	intron (NR_131962, intron 2 of 2)	L1MB3|LINE|L1	191094	NR_131962	105375475	Hs.566654	NR_131960	ENSG00000225546	LINC02476	LVCAT5	long intergenic non-protein coding RNA 2476	ncRNA
42.7334-2	chr8	140358342	140358806	+	0.166667	NA	intron (NM_001160372, intron 9 of 22)	intron (NM_001160372, intron 9 of 22)	99170	NM_001160372	83696	Hs.654911	NM_031466	ENSG00000167632	TRAPPC9	IBP|IKBKBBP|MRT13|NIBP|T1|TRS120	trafficking protein particle complex 9	protein-coding
22-8	chr2	179067171	179067401	+	0.166667	NA	Intergenic	L1PA3|LINE|L1	-17149	NM_173648	285025	Hs.324341	NM_173648	ENSG00000163492	CCDC141	CAMDI	coiled-coil domain containing 141	protein-coding
33.2667	chr1	66071760	66072177	+	0.166667	NA	intron (NM_001037340, intron 1 of 14)	MIR3|SINE|MIR	-21250	NR_123718	101927139	Hs.127908	NR_123718	ENSG00000227466	LOC101927139	-	uncharacterized LOC101927139	ncRNA
32.0667-5	chr8	90181897	90182440	+	0.166667	NA	Intergenic	L2a|LINE|L2	-39320	NR_051989	100874052	Hs.571514	NR_051989	ENSG00000253394	LINC00534	-	long intergenic non-protein coding RNA 534	ncRNA
27.0667-11	chr6	118641503	118641761	+	0.166667	NA	intron (NM_001178035, intron 2 of 13)	Charlie7|DNA|hAT-Charlie	9959	NM_001042475	387119	Hs.656959	NM_206921	ENSG00000111860	CEP85L	C6orf204|NY-BR-15|bA57K17.2	centrosomal protein 85 like	protein-coding
63.6667-3	chr7	40532957	40533637	+	0.166667	NA	intron (NM_001193312, intron 11 of 12)	intron (NM_001193312, intron 11 of 12)	398321	NM_001193312	79783	Hs.586313	NM_024728	ENSG00000175600	SUGCT	C7orf10|DERP13|GA3|ORF19	succinyl-CoA:glutarate-CoA transferase	protein-coding
30.4334	chr1	117591863	117592130	+	0.166667	NA	Intergenic	Intergenic	13774	NR_121626	100996263	Hs.202533	NR_121626	ENSG00000236866	LOC100996263	-	uncharacterized LOC100996263	ncRNA
57.7667	chr1	50981574	50982248	+	0.166667	NA	Intergenic	Intergenic	11666	NM_078626	1031	Hs.525324	NM_001262	ENSG00000123080	CDKN2C	INK4C|p18|p18-INK4C	cyclin dependent kinase inhibitor 2C	protein-coding
63.3-4	chr6	73247570	73248108	+	0.166667	NA	intron (NM_001251874, intron 2 of 4)	AluSx|SINE|Alu	15357	NM_030568	80759	Hs.433062	NM_030568	ENSG00000135314	KHDC1	C6orf147|C6orf148|Em:AC019205.8|KHDC1L|NDG1|bA257K9.4	KH domain containing 1	protein-coding
33.5-2	chr16	22983008	22983416	+	0.166667	NA	Intergenic	L1MEd|LINE|L1	166058	NM_020718	57478	Hs.183817	NM_020718	ENSG00000103404	USP31	-	ubiquitin specific peptidase 31	protein-coding
29.7334-3	chr7	41453298	41453769	+	0.166667	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	-240386	NR_027118	285954	Hs.656869	NR_027118	ENSG00000224116	INHBA-AS1	-	INHBA antisense RNA 1	ncRNA
30.7667-8	chr22	39148315	39148649	+	0.166667	NA	intron (NM_001346744, intron 2 of 5)	intron (NM_001346744, intron 2 of 5)	4198	NM_001346744	23492	Hs.356416	NM_175709	ENSG00000100307	CBX7	-	chromobox 7	protein-coding
34.6667-8	chr18	39058144	39058501	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	563853	NR_030628	100126323		NR_030628	ENSG00000283615	MIR924	MIRN924|hsa-mir-924	microRNA 924	ncRNA
34.6666-2	chr12	20746136	20746772	+	0.166667	NA	intron (NM_017435, intron 13 of 14)	L1MC5|LINE|L1	50989	NM_017435	53919	Hs.47261	NM_017435	ENSG00000139155	SLCO1C1	OATP-F|OATP1|OATP14|OATP1C1|OATPF|OATPRP5|SLC21A14	solute carrier organic anion transporter family member 1C1	protein-coding
15.8333-14	chr6	125995497	125995691	+	0.166667	NA	intron (NM_001031712, intron 2 of 12)	intron (NM_001031712, intron 2 of 12)	9054	NM_001031712	60487	Hs.404186	NM_021820	ENSG00000066651	TRMT11	C6orf75|MDS024|TRM11|TRMT11-1	tRNA methyltransferase 11 homolog	protein-coding
15.8-14	chr8	136411924	136412065	+	0.166667	NA	Intergenic	MLT1I|LTR|ERVL-MaLR	-118804	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
59.3666-2	chr8	13988150	13988578	+	0.166667	NA	Intergenic	Intergenic	358674	NR_134450	102725080	Hs.130621	NR_134450		LOC102725080	-	uncharacterized LOC102725080	ncRNA
35.6-5	chr14	84707344	84707832	+	0.166667	NA	Intergenic	Intergenic	-564344	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
29.4-3	chr12	41031008	41031345	+	0.166667	NA	intron (NM_001843, intron 23 of 23)	intron (NM_001843, intron 23 of 23)	122819	NM_175038	1272	Hs.143434	NM_001843	ENSG00000018236	CNTN1	F3|GP135|MYPCN	contactin 1	protein-coding
51.9667-3	chr17	63409371	63409954	+	0.166667	NA	intron (NM_025185, intron 20 of 25)	Tigger3c|DNA|TcMar-Tigger	30605	NM_001330421	1534	Hs.355264	NM_001915	ENSG00000008283	CYB561	CYB561A1|FRRS2|ORTHYP2	cytochrome b561	protein-coding
19.1334	chr9	73842926	73843108	+	0.166667	NA	Intergenic	Intergenic	-528514	NR_121182	101927358	Hs.559523	NR_121182	ENSG00000227809	LOC101927358	-	uncharacterized LOC101927358	ncRNA
17.7-7	chr2	14391369	14391525	+	0.166667	NA	intron (NR_103814, intron 1 of 3)	MamGypLTR3|LTR|Gypsy	9511	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA
22.7667-2	chr1	242084233	242084377	+	0.166667	NA	3' UTR (NM_001195812, exon 9 of 9)	3' UTR (NM_001195812, exon 9 of 9)	-85207	NM_001004343	440738	Hs.534971	NM_001004343	ENSG00000197769	MAP1LC3C	ATG8J|LC3C	microtubule associated protein 1 light chain 3 gamma	protein-coding
54.6667-3	chr5	51833275	51833726	+	0.166667	NA	Intergenic	Intergenic	-174531	NR_147166	105378960	Hs.639310	NR_147166	ENSG00000248789	LINC02118	-	long intergenic non-protein coding RNA 2118	ncRNA
18.5667-8	chr2	148332848	148332980	+	0.166667	NA	intron (NM_018328, intron 4 of 14)	HAL1|LINE|L1	-311310	NM_181742	5000	Hs.558364	NM_002552	ENSG00000115947	ORC4	ORC4L|ORC4P	origin recognition complex subunit 4	protein-coding
33.4666-2	chr11	112149155	112149559	+	0.166667	NA	intron (NM_001243211, intron 3 of 4)	intron (NM_001243211, intron 3 of 4)	14737	NM_001562	3606	Hs.83077	NM_001562	ENSG00000150782	IL18	IGIF|IL-18|IL-1g|IL1F4	interleukin 18	protein-coding
19.9333-12	chr2	239570559	239570805	+	0.166667	NA	Intergenic	Intergenic	168934	NR_135577	101928111	Hs.534680	NR_135575	ENSG00000222020	HDAC4-AS1	-	HDAC4 antisense RNA 1	ncRNA
69.8667-2	chr3	124389169	124390041	+	0.166667	NA	intron (NM_001024660, intron 11 of 59)	L1ME4a|LINE|L1	15273	NR_106731	102464832		NR_106731	ENSG00000276656	MIR6083	hsa-mir-6083	microRNA 6083	ncRNA
35.4667-11	chr5	40615913	40616186	+	0.166667	NA	Intergenic	L2c|LINE|L2	-63866	NM_000958	5734	Hs.199248	NM_000958	ENSG00000171522	PTGER4	EP4|EP4R	prostaglandin E receptor 4	protein-coding
36.2-4	chr11	95485449	95485895	+	0.166667	NA	Intergenic	Intergenic	-253197	NM_001271594	143686	Hs.120633	NM_144665	ENSG00000149212	SESN3	SEST3	sestrin 3	protein-coding
36.8333-4	chr17	48587448	48587982	+	0.166667	NA	Intergenic	Intergenic	-2705	NR_033201	404266	Hs.660088	NR_033201	ENSG00000233101	HOXB-AS3	-	HOXB cluster antisense RNA 3	ncRNA
27.0333-3	chr10	33998108	33998319	+	0.166667	NA	Intergenic	Intergenic	-225533	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA
38.9667-2	chr12	50471358	50471721	+	0.166667	NA	intron (NM_001352321, intron 13 of 14)	AluSx|SINE|Alu	14968	NR_132753	106633800		NR_132753		SNORD133	ZL142|ZL42|ggn68	small nucleolar RNA, C/D box 133	snoRNA
17.6667-9	chr8	114294667	114295048	+	0.166667	NA	Intergenic	MLT1E3|LTR|ERVL-MaLR	-857918	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
51.0332	chr12	109214548	109214919	+	0.166667	NA	intron (NM_001093, intron 22 of 52)	intron (NM_001093, intron 22 of 52)	94551	NM_213596	121643	Hs.528316	NM_213596	ENSG00000139445	FOXN4	-	forkhead box N4	protein-coding
41.8667	chr1	91813253	91813576	+	0.166667	NA	intron (NR_036634, intron 2 of 17)	intron (NR_036634, intron 2 of 17)	72737	NM_003243	7049	Hs.482390	NM_003243	ENSG00000069702	TGFBR3	BGCAN|betaglycan	transforming growth factor beta receptor 3	protein-coding
77.0001	chrX	116645481	116646149	+	0.166667	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	172045	NR_145523	100126447	Hs.695847	NR_145523		LOC100126447	-	uncharacterized LOC100126447	ncRNA
42.4-11	chr9	99710065	99710603	+	0.166667	NA	intron (NR_109802, intron 3 of 6)	intron (NR_109802, intron 3 of 6)	109555	NR_109802	101928438	Hs.637767	NR_109802	ENSG00000237461	LOC101928438	-	uncharacterized LOC101928438	ncRNA
28.2334-3	chr8	74406476	74406781	+	0.166667	NA	intron (NM_001362931, intron 5 of 5)	intron (NM_001362931, intron 5 of 5)	56225	NM_001362931	54332	Hs.168950	NM_018972	ENSG00000104381	GDAP1	CMT4|CMT4A|CMTRIA	ganglioside induced differentiation associated protein 1	protein-coding
30.2667-7	chr5	27468154	27468680	+	0.166667	NA	Intergenic	Intergenic	-3875	NR_038848	643401	Hs.533212	NR_038848	ENSG00000250337	PURPL	LINC01021	p53 upregulated regulator of p53 levels	ncRNA
52.8667	chr6	138696671	138697262	+	0.166667	NA	non-coding (NR_033896, exon 4 of 4)	non-coding (NR_033896, exon 4 of 4)	5298	NR_033896	441172	Hs.92290	NR_033896		FLJ46906	-	uncharacterized LOC441172	ncRNA
49.0001	chr8	98973754	98974319	+	0.166667	NA	Intergenic	CpG	29594	NM_001142462	116039	Hs.253247	NM_053001	ENSG00000164920	OSR2	-	odd-skipped related transciption factor 2	protein-coding
15.5667-14	chr9	8910577	8910692	+	0.166667	NA	intron (NM_002839, intron 11 of 45)	MSTC|LTR|ERVL-MaLR	52616	NR_121599	101929407	Hs.649971	NR_121599		PTPRD-AS1	-	PTPRD antisense RNA 1	ncRNA
29.1-5	chr2	81826924	81827199	+	0.166667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-360115	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
20.6667	chr1	116082702	116082905	+	0.166667	NA	Intergenic	L1MB2|LINE|L1	-28952	NM_152367	126868	Hs.376194	NM_152367	ENSG00000173212	MAB21L3	C1orf161	mab-21 like 3	protein-coding
28.5-11	chr6	36808394	36808871	+	0.166667	NA	intron (NM_020939, intron 3 of 20)	intron (NM_020939, intron 3 of 20)	30812	NM_001314017	57699	Hs.372129	NM_020939	ENSG00000124772	CPNE5	COPN5|CPN5	copine 5	protein-coding
22.4-3	chr11	12998410	12998685	+	0.166667	NA	Intergenic	L1MB3|LINE|L1	-8999	NR_038904	100506305	Hs.153408	NR_038904	ENSG00000251381	LINC00958	BLACAT2	long intergenic non-protein coding RNA 958	ncRNA
29.1667-7	chr2	117679739	117679956	+	0.166667	NA	Intergenic	Intergenic	-134844	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
38.8334	chr22	39905065	39905474	+	0.166667	NA	intron (NM_004810, intron 1 of 7)	intron (NM_004810, intron 1 of 7)	4185	NM_004810	9402	Hs.517499	NM_004810	ENSG00000100351	GRAP2	GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38	GRB2 related adaptor protein 2	protein-coding
19.8666-7	chr8	136014278	136014512	+	0.166667	NA	Intergenic	Intergenic	-516403	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
49.7667	chr2	56056200	56056619	+	0.166667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-9083	NR_126406	104355290	Hs.580331	NR_126406		MIR217HG	MIR216AHG|MIR216BHG	MIR217 host gene	ncRNA
31.9-5	chr4	128814502	128815042	+	0.166667	NA	intron (NM_001287443, intron 1 of 10)	AluSq2|SINE|Alu	2928	NM_001287443	79960	Hs.12420	NM_024900	ENSG00000077684	JADE1	PHF17	jade family PHD finger 1	protein-coding
16.7667-8	chr5	78524219	78524342	+	0.166667	NA	intron (NM_005779, intron 3 of 4)	intron (NM_005779, intron 3 of 4)	124492	NM_005779	10184	Hs.79299	NM_005779	ENSG00000145685	LHFPL2	-	LHFPL tetraspan subfamily member 2	protein-coding
43.4334-2	chr3	172561819	172562198	+	0.166667	NA	intron (NR_146714, intron 3 of 3)	Tigger3b|DNA|TcMar-Tigger	33599	NR_146714	105374219	Hs.186269	NR_146714	ENSG00000223387	LINC02068	-	long intergenic non-protein coding RNA 2068	ncRNA
32.8-11	chr6	143535404	143535689	+	0.166667	NA	Intergenic	MER34C2|LTR|ERV1	-23826	NM_032020	2519	Hs.17680	NM_032020	ENSG00000001036	FUCA2	dJ20N2.5	alpha-L-fucosidase 2	protein-coding
32.1333-2	chr11	80469379	80469730	+	0.166667	NA	Intergenic	L1MEc|LINE|L1	293249	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
50.2333	chr22	40144244	40144626	+	0.166667	NA	intron (NM_001024843, intron 3 of 23)	AluY|SINE|Alu	-33490	NM_001162501	23112	Hs.372082	NM_015088	ENSG00000100354	TNRC6B	-	trinucleotide repeat containing adaptor 6B	protein-coding
36.1667-5	chr14	51836615	51836990	+	0.166667	NA	Intergenic	Intergenic	-23810	NM_001243774	54331	Hs.187772	NM_053064	ENSG00000186469	GNG2	-	G protein subunit gamma 2	protein-coding
44.1334-2	chr7	42939622	42939935	+	0.166667	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	7402	NM_031903	64983	Hs.50252	NM_031903	ENSG00000106591	MRPL32	HSPC283|L32mt|MRP-L32|bMRP-59b	mitochondrial ribosomal protein L32	protein-coding
33.9333-2	chr11	70001920	70002342	+	0.166667	NA	Intergenic	Tigger3a|DNA|TcMar-Tigger	61793	NR_120530	101928443	Hs.313468	NR_120529	ENSG00000248844	LINC02753	-	long intergenic non-protein coding RNA 2753	ncRNA
59.0667	chr12	34105377	34106028	+	0.166667	NA	Intergenic	Intergenic	83206	NM_032834	84920	Hs.102971	NM_032834	ENSG00000139133	ALG10	ALG10A|DIE2|KCR1	ALG10 alpha-1,2-glucosyltransferase	protein-coding
42.6333	chr2	109488889	109489192	+	0.166667	NA	intron (NM_001099289, intron 8 of 9)	intron (NM_001099289, intron 8 of 9)	124627	NM_001321514	151011	Hs.469615	NM_144710	ENSG00000186522	SEPTIN10	SEPT10	septin 10	protein-coding
41.0667	chr13	103060207	103060678	+	0.166667	NA	intron (NM_000452, intron 1 of 5)	AluJb|SINE|Alu	5975	NM_000452	6555	Hs.194783	NM_000452	ENSG00000125255	SLC10A2	ASBT|IBAT|ISBT|NTCP2|PBAM	solute carrier family 10 member 2	protein-coding
26.3667-10	chr6	142459313	142459568	+	0.166667	NA	Intergenic	Intergenic	157433	NM_198569	57211	Hs.743302	NM_020455	ENSG00000112414	ADGRG6	APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR	adhesion G protein-coupled receptor G6	protein-coding
34.5-4	chr11	23848826	23849146	+	0.166667	NA	Intergenic	L2a|LINE|L2	-429796	NR_107021	102465860		NR_107021	ENSG00000275868	MIR8054	hsa-mir-8054	microRNA 8054	ncRNA
25.4-15	chr3	189630647	189630860	+	0.166667	NA	promoter-TSS (NM_001114979)	promoter-TSS (NM_001114979)	-636	NM_001114979	8626	Hs.137569	NM_003722	ENSG00000073282	TP63	AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L	tumor protein p63	protein-coding
29.9667-4	chr2	106180138	106180531	+	0.166667	NA	intron (NM_025076, intron 1 of 14)	intron (NM_025076, intron 1 of 14)	14005	NM_025076	80146	Hs.469561	NM_025076	ENSG00000115652	UXS1	SDR6E1|UGD	UDP-glucuronate decarboxylase 1	protein-coding
21.7667-4	chr17	55072110	55072374	+	0.166667	NA	intron (NM_178509, intron 12 of 17)	MIRb|SINE|MIR	-103457	NM_001162861	1353	Hs.591171	NM_004375	ENSG00000166260	COX11	COX11P	cytochrome c oxidase copper chaperone COX11	protein-coding
56.3667	chr11	30154858	30155533	+	0.166667	NA	Intergenic	Intergenic	-75819	NM_001018080	2488	Hs.36975	NM_000510	ENSG00000131808	FSHB	HH24	follicle stimulating hormone subunit beta	protein-coding
49.8667-3	chr6	70837631	70838132	+	0.166667	NA	intron (NM_001044305, intron 7 of 10)	intron (NM_001044305, intron 7 of 10)	119179	NM_080742	135152	Hs.713609	NM_080742	ENSG00000112309	B3GAT2	GLCATS	beta-1,3-glucuronyltransferase 2	protein-coding
30.3667-8	chr5	13735802	13736192	+	0.166667	NA	intron (NM_001369, intron 66 of 78)	intron (NM_001369, intron 66 of 78)	208483	NM_001369	1767	Hs.212360	NM_001369	ENSG00000039139	DNAH5	CILD3|DNAHC5|HL1|KTGNR|PCD	dynein axonemal heavy chain 5	protein-coding
27.4333-5	chr15	67874130	67874551	+	0.166667	NA	Intergenic	L1M4|LINE|L1	-34295	NR_104088	101954278		NR_104088	ENSG00000202337	RNU6-8	U6-8	RNA, U6 small nuclear 8	snRNA
33.8-3	chr5	11135385	11135780	+	0.166667	NA	intron (NM_001288715, intron 11 of 20)	intron (NM_001288715, intron 11 of 20)	-374348	NM_001291963	1611	Hs.75189	NM_004394	ENSG00000112977	DAP	-	death associated protein	protein-coding
27.0334-3	chr3	68739481	68739683	+	0.166667	NA	intron (NM_001005527, intron 4 of 5)	L1PB4|LINE|L1	192965	NM_182522	151647	Hs.187873	NM_182522	ENSG00000163377	TAFA4	FAM19A4|TAFA-4	TAFA chemokine like family member 4	protein-coding
31.1333-14	chr9	82104366	82104778	+	0.166667	NA	Intergenic	MER3|DNA|hAT-Charlie	115800	NM_001001670	389763	Hs.209545	NM_001001670	ENSG00000214929	SPATA31D1	FAM75D1	SPATA31 subfamily D member 1	protein-coding
26.8-13	chr4	188240856	188241038	+	0.166667	NA	Intergenic	AluSg|SINE|Alu	101506	NM_178556	339976	Hs.348618	NM_178556	ENSG00000184108	TRIML1	RNF209	tripartite motif family like 1	protein-coding
32-2	chr10	108107210	108107678	+	0.166667	NA	Intergenic	Intergenic	-38151	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
64.4668	chr7	64452381	64452834	+	0.166667	NA	Intergenic	AluSp|SINE|Alu	18914	NR_029404	649395	Hs.728871	NR_029404		YWHAEP1	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1	pseudo
49.6	chr19	31175340	31175985	+	0.166667	NA	intron (NR_147209, intron 2 of 4)	intron (NR_147209, intron 2 of 4)	8152	NR_147209	107985312	Hs.211053	NR_147209	ENSG00000267777	LINC01791	-	long intergenic non-protein coding RNA 1791	ncRNA
34.3334	chr12	52485580	52485813	+	0.166667	NA	Intergenic	L1MA5A|LINE|L1	7561	NM_005554	3853	Hs.700779	NM_005554	ENSG00000205420	KRT6A	CK-6C|CK-6E|CK6A|CK6C|CK6D|K6A|K6C|K6D|KRT6C|KRT6D|PC3	keratin 6A	protein-coding
39.2666	chr1	86418856	86419458	+	0.166667	NA	Intergenic	Intergenic	-5014	NM_006536	9635	Hs.241551	NM_006536	ENSG00000137975	CLCA2	CACC|CACC3|CLCRG2|CaCC-3	chloride channel accessory 2	protein-coding
35.3-3	chr22	29620592	29620909	+	0.166667	NA	intron (NM_181831, intron 1 of 14)	AluJo|SINE|Alu	17117	NM_181829	4771	Hs.187898	NM_000268	ENSG00000186575	NF2	ACN|BANF|SCH	neurofibromin 2	protein-coding
15.9333-7	chr2	156067228	156067415	+	0.166667	NA	intron (NR_110250, intron 1 of 3)	intron (NR_110250, intron 1 of 3)	187610	NR_110249	101929378	Hs.171192	NR_110249	ENSG00000226383	LINC01876	-	long intergenic non-protein coding RNA 1876	ncRNA
62.3999	chr13	75301141	75301875	+	0.166667	NA	intron (NM_001286658, intron 15 of 19)	AluY|SINE|Alu	60920	NR_132375	106144536	Hs.591226	NR_132375		LINC01078	-	long intergenic non-protein coding RNA 1078	ncRNA
48.1334-2	chr3	17958304	17959037	+	0.166667	NA	Intergenic	L1MEd|LINE|L1	-3882	NR_161333	339862	Hs.652981	NR_046199		LOC339862	-	uncharacterized LOC339862	ncRNA
54.5333	chr11	76798601	76799455	+	0.166667	NA	TTS (NM_015516)	TTS (NM_015516)	7276	NM_001318477	25987	Hs.8361	NM_015516	ENSG00000182704	TSKU	E2IG4|LRRC54|TSK	tsukushi, small leucine rich proteoglycan	protein-coding
33.6-9	chrX	151259873	151260172	+	0.166667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-82186	NR_135300	100128688	Hs.460993	NR_135300	ENSG00000234696	GPR50-AS1	-	GPR50 antisense RNA 1	ncRNA
36.5-9	chrX	81759933	81760205	+	0.166667	NA	Intergenic	L1PA11|LINE|L1	557967	NM_003022	6451	Hs.108029	NM_003022	ENSG00000131171	SH3BGRL	HEL-S-115|SH3BGR	SH3 domain binding glutamate rich protein like	protein-coding
39.3667	chr3	180438885	180439174	+	0.166667	NA	Intergenic	L1MEc|LINE|L1	24856	NR_132416	100505609	Hs.518427	NR_132416	ENSG00000241696	LINC02053	-	long intergenic non-protein coding RNA 2053	ncRNA
32.9-7	chr19	27892922	27893340	+	0.166667	NA	intron (NR_146734, intron 1 of 7)	intron (NR_146734, intron 1 of 7)	-99191	NR_027301	148189	Hs.706547	NR_027301	ENSG00000261824	LINC00662	-	long intergenic non-protein coding RNA 662	ncRNA
39.3001-2	chr21	44535961	44536278	+	0.166667	NA	intron (NM_144991, intron 2 of 11)	HAL1M8|LINE|L1	4076	NM_198691	386677	Hs.688631	NM_198691	ENSG00000215455	KRTAP10-1	KAP10.1|KAP18-1|KAP18.1|KRTAP10.1|KRTAP18-1|KRTAP18.1	keratin associated protein 10-1	protein-coding
21.6334	chr12	90761970	90762138	+	0.166667	NA	Intergenic	Intergenic	-155969	NR_038868	439916	Hs.350600	NM_001039384	ENSG00000196243	LINC00615	C12orf37	long intergenic non-protein coding RNA 615	ncRNA
19.1-3	chr10	758368	758538	+	0.166667	NA	Intergenic	Intergenic	-68785	NM_014974	22982	Hs.432397	NM_014974	ENSG00000151240	DIP2C	KIAA0934	disco interacting protein 2 homolog C	protein-coding
31.6667-7	chr2	225634403	225634650	+	0.166667	NA	intron (NM_001371273, intron 6 of 7)	intron (NM_001371273, intron 6 of 7)	233640	NM_020864	57624	Hs.224409	NM_020864	ENSG00000144460	NYAP2	KIAA1486	neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	protein-coding
47.1333-2	chr11	105774269	105774616	+	0.166667	NA	intron (NR_046356, intron 3 of 16)	L1M5|LINE|L1	163736	NR_046356	2893	Hs.503743	NM_000829	ENSG00000152578	GRIA4	GLUR4|GLUR4C|GLURD|GluA4|NEDSGA	glutamate ionotropic receptor AMPA type subunit 4	protein-coding
36.1-4	chr7	41919253	41919620	+	0.166667	NA	Intergenic	Intergenic	-216346	NM_002192	3624	Hs.28792	NM_002192	ENSG00000122641	INHBA	EDF|FRP	inhibin subunit beta A	protein-coding
43.2667-5	chr16	58233408	58233867	+	0.166667	NA	Intergenic	Intergenic	-16299	NM_001142302	29070	Hs.11614	NM_014157	ENSG00000103021	CCDC113	HSPC065	coiled-coil domain containing 113	protein-coding
36.8333	chr10	107942975	107943247	+	0.166667	NA	intron (NR_125760, intron 4 of 4)	intron (NR_125760, intron 4 of 4)	126182	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
20.9-11	chr2	84559983	84560226	+	0.166667	NA	intron (NM_001370, intron 11 of 76)	L1MC4|LINE|L1	43649	NM_001370	1768	Hs.249972	NM_001370	ENSG00000115423	DNAH6	DNHL1|Dnahc6|HL-2|HL2	dynein axonemal heavy chain 6	protein-coding
37.3334-2	chr4	65764211	65764706	+	0.166667	NA	Intergenic	AluSx1|SINE|Alu	-93963	NM_001281765	2044	Hs.654492	NM_004439	ENSG00000145242	EPHA5	CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4	EPH receptor A5	protein-coding
11.3333-4	chr3	179337255	179337378	+	0.166667	NA	3' UTR (NM_001303426, exon 6 of 6)	3' UTR (NM_001303426, exon 6 of 6)	-10393	NM_033540	55669	Hs.478383	NM_017927	ENSG00000171109	MFN1	hfzo1|hfzo2	mitofusin 1	protein-coding
35.4667-6	chr15	65879932	65880350	+	0.166667	NA	intron (NM_004663, intron 4 of 4)	intron (NM_004663, intron 4 of 4)	10650	NM_004663	8766	Hs.321541	NM_004663	ENSG00000103769	RAB11A	YL8	RAB11A, member RAS oncogene family	protein-coding
47.6	chr10	67330861	67331360	+	0.166667	NA	intron (NM_001127384, intron 5 of 17)	intron (NM_001127384, intron 5 of 17)	72300	NR_106973	102466814		NR_106973	ENSG00000276866	MIR7151	hsa-mir-7151	microRNA 7151	ncRNA
49.8334	chr2	20971284	20971859	+	0.166667	NA	Intergenic	Intergenic	72502	NM_000384	338	Hs.120759	NM_000384	ENSG00000084674	APOB	FLDB|LDLCQ4|apoB-100|apoB-48	apolipoprotein B	protein-coding
32.8667-3	chr2	204503194	204503751	+	0.166667	NA	Intergenic	Intergenic	-42003	NM_152526	117583	Hs.657382	NM_057177	ENSG00000116117	PARD3B	ALS2CR19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding
40.2334-2	chr16	64557235	64557590	+	0.166667	NA	Intergenic	Intergenic	564651	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
18.3334	chr8	129407086	129407210	+	0.166667	NA	intron (NR_130920, intron 1 of 3)	intron (NR_130920, intron 1 of 3)	76994	NR_037457	100500839		NR_037457	ENSG00000263763	MIR3686	-	microRNA 3686	ncRNA
27.0334	chr14	73693019	73693325	+	0.166667	NA	intron (NM_001201366, intron 8 of 8)	L1ME3A|LINE|L1	21212	NM_006029	9240	Hs.194709	NM_006029	ENSG00000176903	PNMA1	MA1	PNMA family member 1	protein-coding
40.2334-4	chr4	136772096	136772399	+	0.166667	NA	Intergenic	Intergenic	-421509	NR_134640	729307	Hs.552764	NR_134640		LINC02510	-	long intergenic non-protein coding RNA 2510	ncRNA
13.4667-5	chr2	180242120	180242269	+	0.166667	NA	Intergenic	Intergenic	-234897	NM_020943	57703	Hs.311363	NM_020943	ENSG00000163510	CWC22	EIF4GL|NCM|fSAPb	CWC22 spliceosome associated protein homolog	protein-coding
25.6333	chr11	74168649	74168884	+	0.166667	NA	intron (NM_001286577, intron 1 of 32)	intron (NM_001286577, intron 1 of 32)	2236	NM_015531	26005	Hs.557938	NM_015531	ENSG00000168014	C2CD3	OFD14	C2 domain containing 3 centriole elongation regulator	protein-coding
18.1-6	chr15	97743321	97743552	+	0.166667	NA	non-coding (NR_024172, exon 3 of 3)	non-coding (NR_024172, exon 3 of 3)	130993	NR_024172	91948	Hs.130423	NR_024172	ENSG00000251209	LINC00923	-	long intergenic non-protein coding RNA 923	ncRNA
26.8334	chr4	44924892	44925228	+	0.166667	NA	Intergenic	Intergenic	-198426	NR_073095	132789	Hs.21398	NM_138335	ENSG00000163281	GNPDA2	GNP2|SB52	glucosamine-6-phosphate deaminase 2	protein-coding
38.3667	chr16	63967775	63968154	+	0.166667	NA	Intergenic	Intergenic	1154099	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
25.3-16	chr7	55187889	55188088	+	0.166667	NA	intron (NR_047551, intron 1 of 1)	intron (NR_047551, intron 1 of 1)	961	NR_047551	100507500	Hs.720489	NR_047551	ENSG00000224057	EGFR-AS1	-	EGFR antisense RNA 1	ncRNA
24.0333-8	chr15	91993288	91993697	+	0.166667	NA	intron (NR_135775, intron 2 of 10)	intron (NR_135775, intron 2 of 10)	139188	NR_135775	28232	Hs.311187	NM_013272	ENSG00000176463	SLCO3A1	OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11	solute carrier organic anion transporter family member 3A1	protein-coding
26.5334-2	chr21	38082995	38083266	+	0.166667	NA	intron (NR_147130, intron 2 of 2)	intron (NR_147130, intron 2 of 2)	38230	NR_147130	10281	Hs.23251	NM_005867	ENSG00000184029	DSCR4	DCRB|DSCRB	Down syndrome critical region 4	ncRNA
65.4001	chr2	118932941	118933402	+	0.166667	NA	Intergenic	L1M4c|LINE|L1	-8998	NM_006770	8685	Hs.67726	NM_006770	ENSG00000019169	MARCO	SCARA2|SR-A6	macrophage receptor with collagenous structure	protein-coding
20.6667-7	chr13	98375000	98375133	+	0.166667	NA	intron (NM_005766, intron 5 of 26)	MSTB1|LTR|ERVL-MaLR	147059	NM_003576	8428	Hs.508514	NM_003576	ENSG00000102572	STK24	HEL-S-95|MST3|MST3B|STE20|STK3	serine/threonine kinase 24	protein-coding
31.8-13	chr8	131271732	131271954	+	0.166667	NA	Intergenic	Intergenic	-230934	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
24.2334-2	chr10	76301159	76301304	+	0.166667	NA	intron (NM_001305581, intron 5 of 6)	intron (NM_001305581, intron 5 of 6)	518470	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	LRMDA	C10orf11|CDA017	leucine rich melanocyte differentiation associated	protein-coding
40.7667	chr14	26602797	26603198	+	0.166667	NA	intron (NR_147061, intron 1 of 6)	intron (NR_147061, intron 1 of 6)	4350	NR_147061	102725045	Hs.143441	NR_147061		LINC02588	C14orf22|NOVA1-AS1	long intergenic non-protein coding RNA 2588	ncRNA
30.9667-3	chr3	41553143	41553439	+	0.166667	NA	intron (NR_136342, intron 30 of 34)	L1MA4A|LINE|L1	353786	NM_001330729	1499	Hs.476018	NM_001904	ENSG00000168036	CTNNB1	CTNNB|EVR7|MRD19|NEDSDV|armadillo	catenin beta 1	protein-coding
19.2334	chr5	168239420	168239553	+	0.166667	NA	intron (NM_001368145, intron 23 of 26)	intron (NM_001368145, intron 23 of 26)	-7114	NR_109894	101927862	Hs.659376	NR_109894	ENSG00000253978	CTB-178M22.2	-	uncharacterized LOC101927862	ncRNA
51.9999	chr16	58249004	58249542	+	0.166667	NA	promoter-TSS (NM_001142302)	promoter-TSS (NM_001142302)	-663	NM_001142302	29070	Hs.11614	NM_014157	ENSG00000103021	CCDC113	HSPC065	coiled-coil domain containing 113	protein-coding
16.9334	chr8	83675885	83676030	+	0.166667	NA	Intergenic	Intergenic	272199	NR_122034	103352670	Hs.399852	NR_122034	ENSG00000253898	LINC01419	LVCAT7|TCONS_00014497	long intergenic non-protein coding RNA 1419	ncRNA
27.7-3	chr12	99923869	99924128	+	0.166667	NA	intron (NM_152788, intron 1 of 25)	MER96B|DNA|hAT	60656	NM_001352186	56899	Hs.506458	NM_020140	ENSG00000185046	ANKS1B	AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
16.4667-6	chr14	73836371	73836470	+	0.166667	NA	Intergenic	AluJo|SINE|Alu	-6285	NR_135238	100506498	Hs.569330	NR_135238	ENSG00000258586	LINC02274	-	long intergenic non-protein coding RNA 2274	ncRNA
61.0334-3	chr6	72563140	72563861	+	0.166667	NA	Intergenic	Intergenic	-58343	NM_001160130	56479	Hs.445324	NM_019842	ENSG00000185760	KCNQ5	Kv7.5|MRD46	potassium voltage-gated channel subfamily Q member 5	protein-coding
36.6-3	chr18	10071067	10071458	+	0.166667	NA	Intergenic	MLT1E2|LTR|ERVL-MaLR	157246	NM_194434	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding
30.1333	chr10	53605720	53606005	+	0.166667	NA	Intergenic	L1M3c|LINE|L1	-834162	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
25.2-9	chr2	21950030	21950237	+	0.166667	NA	Intergenic	AluSc|SINE|Alu	-239481	NR_038837	645949	Hs.456782	NR_038837	ENSG00000229621	LINC01822	-	long intergenic non-protein coding RNA 1822	ncRNA
30.9-8	chr4	181206461	181206811	+	0.166667	NA	Intergenic	Intergenic	-47487	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
34.1667-2	chr10	97937815	97938084	+	0.166667	NA	intron (NM_001206528, intron 2 of 14)	intron (NM_001206528, intron 2 of 14)	-62052	NR_162124	113839520		NR_162124		MIR3085	-	microRNA 3085	ncRNA
30.5667-6	chrX	77502873	77503083	+	0.166667	NA	Intergenic	Intergenic	55589	NM_003868	8823	Hs.666364	NM_003868	ENSG00000196468	FGF16	FGF-16|MF4	fibroblast growth factor 16	protein-coding
20.3-13	chr4	43476432	43476578	+	0.166667	NA	intron (NR_146993, intron 1 of 2)	L1M1|LINE|L1	16038	NR_146993	105374436	Hs.170605	NR_146993	ENSG00000248143	LINC02383	-	long intergenic non-protein coding RNA 2383	ncRNA
26.9-4	chr11	64471248	64471510	+	0.166667	NA	Intergenic	L1M5|LINE|L1	22322	NR_073177	100996455	Hs.634142	NR_073177	ENSG00000181908	LINC02724	-	long intergenic non-protein coding RNA 2724	ncRNA
27.1333-11	chr3	43437050	43437433	+	0.166667	NA	intron (NM_001346464, intron 12 of 13)	HAL1ME|LINE|L1	-85279	NR_046757	100873954	Hs.600984	NR_046757		SNRK-AS1	-	SNRK antisense RNA 1	ncRNA
20.7333-13	chr3	36711513	36711714	+	0.166667	NA	TTS (NM_033403)	TTS (NM_033403)	28248	NM_033403	85443	Hs.631907	NM_033403	ENSG00000163673	DCLK3	CLR|DCAMKL3|DCDC3C|DCK3	doublecortin like kinase 3	protein-coding
39.2667-7	chr8	89045810	89046063	+	0.166667	NA	Intergenic	L1ME3A|LINE|L1	711775	NR_125822	101929709	Hs.651324	NR_125822	ENSG00000251136	LOC101929709	-	uncharacterized LOC101929709	ncRNA
48.0334-2	chr6	129755730	129756136	+	0.166667	NA	Intergenic	L2a|LINE|L2	-45756	NM_033515	93663	Hs.486458	NM_033515	ENSG00000146376	ARHGAP18	MacGAP|SENEX|bA307O14.2	Rho GTPase activating protein 18	protein-coding
43.8666	chr10	101806467	101806923	+	0.166667	NA	intron (NM_012215, intron 5 of 15)	intron (NM_012215, intron 5 of 15)	11749	NM_012215	10724	Hs.500842	NM_012215	ENSG00000198408	OGA	MEA5|MGEA5|NCOAT	O-GlcNAcase	protein-coding
30.8-12	chr6	67827071	67827414	+	0.166667	NA	Intergenic	MIR|SINE|MIR	-228109	NR_125869	102723883	Hs.566528	NR_125869	ENSG00000223504	LOC102723883	-	uncharacterized LOC102723883	ncRNA
47.0334	chr10	132631488	132631976	+	0.166667	NA	intron (NM_005539, intron 2 of 15)	intron (NM_005539, intron 2 of 15)	-49543	NM_001321042	3632	Hs.523360	NM_005539	ENSG00000068383	INPP5A	5PTASE	inositol polyphosphate-5-phosphatase A	protein-coding
33.3667	chr1	232469411	232469768	+	0.166667	NA	intron (NM_020808, intron 6 of 20)	intron (NM_020808, intron 6 of 20)	46019	NM_020808	57568	Hs.745009	NM_020808	ENSG00000116991	SIPA1L2	SPAL2|SPAR2	signal induced proliferation associated 1 like 2	protein-coding
63.2333-2	chr11	101913844	101914832	+	0.166667	NA	promoter-TSS (NM_020802)	promoter-TSS (NM_020802)	-672	NM_020802	57562	Hs.156352	NM_020802	ENSG00000110318	CEP126	KIAA1377	centrosomal protein 126	protein-coding
36.3-3	chr13	72860986	72861281	+	0.166667	NA	intron (NR_146206, intron 10 of 16)	intron (NR_146206, intron 10 of 16)	79000	NM_006346	10464	Hs.441926	NM_006346	ENSG00000083535	PIBF1	C13orf24|CEP90|JBTS33|PIBF	progesterone immunomodulatory binding factor 1	protein-coding
60.8668	chr8	140441635	140442088	+	0.166667	NA	intron (NM_001160372, intron 2 of 22)	AluJr|SINE|Alu	15883	NM_001160372	83696	Hs.654911	NM_031466	ENSG00000167632	TRAPPC9	IBP|IKBKBBP|MRT13|NIBP|T1|TRS120	trafficking protein particle complex 9	protein-coding
22.7667-14	chr6	40639695	40639897	+	0.166667	NA	Intergenic	Intergenic	-52432	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding
42.8001	chr10	116055357	116055742	+	0.166667	NA	Intergenic	Intergenic	139240	NR_145811	109623470		NR_145811		SNORD158	-	small nucleolar RNA, C/D box 158	snoRNA
34.8667-6	chr6	166138052	166138360	+	0.166667	NA	Intergenic	AluSz6|SINE|Alu	29645	NM_001366285	6862	Hs.389457	NM_003181	ENSG00000164458	TBXT	SAVA|T|TFT	T-box transcription factor T	protein-coding
58.8667-2	chr8	117652364	117652907	+	0.166667	NA	Intergenic	MIRb|SINE|MIR	131922	NM_080651	90390	Hs.492612	NM_080651	ENSG00000164758	MED30	MED30S|THRAP6|TRAP25	mediator complex subunit 30	protein-coding
13.2333-10	chr7	47870451	47870577	+	0.166667	NA	intron (NM_138295, intron 24 of 56)	L1MB8|LINE|L1	75223	NR_161268	80099	Hs.287647	NM_025031		C7orf69	-	chromosome 7 open reading frame 69	ncRNA
23.7667-12	chr3	39292780	39293112	+	0.166667	NA	Intergenic	Intergenic	-11211	NM_001171174	1524	Hs.78913	NM_001337	ENSG00000168329	CX3CR1	CCRL1|CMKBRL1|CMKDR1|GPR13|GPRV28|V28	C-X3-C motif chemokine receptor 1	protein-coding
20.0333-17	chr8	144593396	144593641	+	0.166667	NA	intron (NM_025251, intron 1 of 10)	L1MB8|LINE|L1	12177	NM_025251	80728	Hs.148988	NM_025251	ENSG00000147799	ARHGAP39	CrGAP|Vilse	Rho GTPase activating protein 39	protein-coding
27.2-2	chr11	59140118	59140301	+	0.166667	NA	intron (NR_110184, intron 1 of 3)	intron (NR_110184, intron 1 of 3)	-2537	NM_001142520	63901	Hs.150651	NM_022074	ENSG00000166801	FAM111A	GCLEB|KCS2	family with sequence similarity 111 member A	protein-coding
54.9667	chr2	59445661	59446175	+	0.166667	NA	Intergenic	L2a|LINE|L2	228210	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
17.8-19	chr7	94076294	94076517	+	0.166667	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-72050	NM_001317739	10282	Hs.489132	NM_005868	ENSG00000105829	BET1	HBET1	Bet1 golgi vesicular membrane trafficking protein	protein-coding
34.2667-9	chr6	125323895	125324205	+	0.166667	NA	Intergenic	Intergenic	-22083	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding
50.7667-3	chr2	28500596	28500989	+	0.166667	NA	intron (NM_001170585, intron 1 of 56)	L1MC5a|LINE|L1	4721	NM_001170585	151056	Hs.444933	NM_153021	ENSG00000163803	PLB1	PLB|PLB/LIP	phospholipase B1	protein-coding
33.5334-2	chr4	120751301	120751740	+	0.166667	NA	intron (NM_001300824, intron 12 of 13)	L1MCc|LINE|L1	171346	NM_001300824	11107	Hs.666782	NM_018699	ENSG00000138738	PRDM5	BCS2|PFM2	PR/SET domain 5	protein-coding
25.6667-4	chr20	63474476	63474776	+	0.166667	NA	Intergenic	Intergenic	-1971	NM_172109	3785	Hs.161851	NM_004518	ENSG00000075043	KCNQ2	BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2	potassium voltage-gated channel subfamily Q member 2	protein-coding
24.4-15	chr2	74146440	74146633	+	0.166667	NA	intron (NM_212552, intron 1 of 3)	intron (NM_212552, intron 1 of 3)	1376	NM_001035505	388962	Hs.61472	NM_212552	ENSG00000163170	BOLA3	MMDS2	bolA family member 3	protein-coding
40.4-3	chr13	58407298	58407831	+	0.166667	NA	Intergenic	Intergenic	-174447	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA
58.1666-2	chr14	28207329	28207923	+	0.166667	NA	Intergenic	AluSx4|SINE|Alu	-534405	NR_148991	728755	Hs.652058	NR_148991	ENSG00000258932	LOC728755	-	uncharacterized LOC728755	ncRNA
14.8666-3	chr5	140005524	140005634	+	0.166667	NA	intron (NM_013983, intron 1 of 10)	intron (NM_013983, intron 1 of 10)	37720	NM_004883	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding
37.1	chr10	85795930	85796496	+	0.166667	NA	intron (NM_017551, intron 8 of 15)	intron (NM_017551, intron 8 of 15)	218482	NR_038986	100507470	Hs.585483	NR_038986	ENSG00000234942	GRID1-AS1	-	GRID1 antisense RNA 1	ncRNA
44.4999-2	chr12	10533203	10533546	+	0.166667	NA	Intergenic	L1M1|LINE|L1	-20005	NR_146456	101060038		NR_146455		LINC02446	-	long intergenic non-protein coding RNA 2446	ncRNA
64.3668	chr5	116040418	116040960	+	0.166667	NA	Intergenic	Intergenic	-10777	NM_001195581	644100	Hs.98288	NM_001195581	ENSG00000268223	ARL14EPL	-	ADP ribosylation factor like GTPase 14 effector protein like	protein-coding
37.9334	chr12	64079499	64079757	+	0.166667	NA	intron (NM_001346201, intron 9 of 21)	AluJb|SINE|Alu	142668	NM_001300941	144577	Hs.444671	NM_152440	ENSG00000174206	C12orf66	-	chromosome 12 open reading frame 66	protein-coding
21-9	chr6	157658563	157658728	+	0.166667	NA	intron (NM_153746, intron 8 of 8)	L1M4|LINE|L1	129513	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA
26.3667-5	chr20	1177254	1177425	+	0.166667	NA	Intergenic	L2a|LINE|L2	7134	NM_018354	55321	Hs.516834	NM_018354	ENSG00000125895	TMEM74B	C20orf46	transmembrane protein 74B	protein-coding
36.0667	chr10	107063774	107064165	+	0.166667	NA	intron (NM_001206569, intron 1 of 25)	intron (NM_001206569, intron 1 of 25)	100737	NM_001206571	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
26.4333-8	chr19	31075281	31075584	+	0.166667	NA	Intergenic	Intergenic	-92078	NR_147209	107985312	Hs.211053	NR_147209	ENSG00000267777	LINC01791	-	long intergenic non-protein coding RNA 1791	ncRNA
13.6333-13	chr7	42361259	42361425	+	0.166667	NA	Intergenic	Intergenic	-124133	NM_000168	2737	Hs.21509	NM_000168	ENSG00000106571	GLI3	ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV	GLI family zinc finger 3	protein-coding
28.5	chr1	178913753	178914347	+	0.166667	NA	intron (NM_152663, intron 19 of 19)	L1PA16|LINE|L1	-42973	NM_004673	9068	Hs.591474	NM_004673	ENSG00000116194	ANGPTL1	ANG3|ANGPT3|ARP1|AngY|UNQ162|dJ595C2.2	angiopoietin like 1	protein-coding
57.1001	chr7	6139138	6139600	+	0.166667	NA	intron (NM_032172, intron 5 of 17)	intron (NM_032172, intron 5 of 17)	32768	NM_001367582	9265	Hs.487479	NM_004227	ENSG00000008256	CYTH3	ARNO3|GRP1|PSCD3|cytohesin-3	cytohesin 3	protein-coding
13.5-11	chr5	118408037	118408168	+	0.166667	NA	intron (NR_104610, intron 9 of 9)	intron (NR_104610, intron 9 of 9)	125528	NR_104609	100505811	Hs.369776	NR_104609	ENSG00000250427	LINC02148	HNCAT21	long intergenic non-protein coding RNA 2148	ncRNA
31.5667-4	chr2	122773962	122774173	+	0.166667	NA	Intergenic	L1PA8|LINE|L1	299414	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
28.4667-13	chr8	140084210	140084380	+	0.166667	NA	intron (NM_001160372, intron 17 of 22)	intron (NM_001160372, intron 17 of 22)	16240	NR_144431	359809	Hs.26814	NR_144431	ENSG00000282164	PEG13	-	paternally expressed 13	ncRNA
28.1334	chr11	9920654	9920949	+	0.166667	NA	intron (NR_120539, intron 2 of 2)	intron (NR_120539, intron 2 of 2)	81659	NR_120539	101928008	Hs.585524	NR_120539	ENSG00000255476	LOC101928008	-	uncharacterized LOC101928008	ncRNA
56.5	chr11	2757990	2758554	+	0.166667	NA	intron (NM_181798, intron 11 of 15)	L1MD1|LINE|L1	-58274	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1	ncRNA
40.1999-2	chr11	98897095	98897561	+	0.133333	NA	Intergenic	Intergenic	-123621	NM_014361	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
15.5-12	chr8	111408470	111408649	+	0.133333	NA	intron (NR_146282, intron 2 of 3)	intron (NR_146282, intron 2 of 3)	31920	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
16.8667-5	chr12	56243555	56243710	+	0.133333	NA	intron (NM_173595, intron 27 of 27)	intron (NM_173595, intron 27 of 27)	12915	NM_001135195	283375	Hs.591018	NM_173596	ENSG00000139540	SLC39A5	LZT-Hs7|MYP24|ZIP5	solute carrier family 39 member 5	protein-coding
13.1667-9	chr5	28978292	28978430	+	0.133333	NA	Intergenic	Intergenic	51491	NR_033961	729862	Hs.646006	NR_033961		LSP1P3	-	LSP1 pseudogene 3	pseudo
38.6666-2	chr22	50575708	50576148	+	0.133333	NA	intron (NR_027928, intron 17 of 29)	intron (NR_027928, intron 17 of 29)	2089	NM_001145137	1375	Hs.439777	NM_004377	ENSG00000205560	CPT1B	CPT1-M|CPT1M|CPTI|CPTI-M|M-CPT1|MCCPT1|MCPT1	carnitine palmitoyltransferase 1B	protein-coding
47.6999-2	chr8	120614429	120614899	+	0.133333	NA	intron (NM_021021, intron 3 of 6)	intron (NM_021021, intron 3 of 6)	-146589	NR_125419	101927543	Hs.371902	NR_125419	ENSG00000248318	LOC101927543	-	uncharacterized LOC101927543	ncRNA
9.66665	chr6	10186402	10186479	+	0.133333	NA	Intergenic	L2c|LINE|L2	-218062	NR_145448	109729173		NR_145448	ENSG00000285278	TFAP2A-AS2	HIPSTR	TFAP2A antisense RNA 2	ncRNA
24.4666	chr1	100246486	100246670	+	0.133333	NA	intron (NM_001918, intron 1 of 10)	intron (NM_001918, intron 1 of 10)	3256	NM_001918	1629	Hs.709187	NM_001918	ENSG00000137992	DBT	BCATE2|BCKAD-E2|BCKADE2|BCOADC-E2|E2|E2B	dihydrolipoamide branched chain transacylase E2	protein-coding
24.5-10	chr3	18193632	18194033	+	0.133333	NA	intron (NR_161333, intron 4 of 4)	L1ME4a|LINE|L1	231280	NR_161333	339862	Hs.652981	NR_046199		LOC339862	-	uncharacterized LOC339862	ncRNA
10.1667-5	chr4	3030434	3030615	+	0.133333	NA	intron (NM_001004056, intron 11 of 14)	L2a|LINE|L2	43990	NR_045414	100750326	Hs.575112	NR_045414		HTT-AS	HTT-AS1|HTTAS	HTT antisense RNA	ncRNA
38.9999-2	chr6	88637093	88637612	+	0.133333	NA	intron (NM_001286428, intron 12 of 13)	intron (NM_001286428, intron 12 of 13)	-97983	NR_110867	101928936	Hs.533080	NR_110867		LOC101928936	-	uncharacterized LOC101928936	ncRNA
13.5333-2	chr1	113406630	113406828	+	0.133333	NA	intron (NM_001142782, intron 1 of 20)	FLAM_A|SINE|Alu	16214	NM_152900	260425	Hs.486189	NM_020965	ENSG00000081026	MAGI3	MAGI-3|dJ730K3.2	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
19.0666-4	chr8	132275316	132275524	+	0.133333	NA	intron (NM_004519, intron 1 of 14)	intron (NM_004519, intron 1 of 14)	-170155	NM_001145095	10086	Hs.285026	NM_005712	ENSG00000132297	HHLA1	PLA2L	HERV-H LTR-associating 1	protein-coding
58	chr1	109790591	109791288	+	0.133333	NA	Intergenic	Intergenic	-27016	NM_024526	79574	Hs.485352	NM_024526	ENSG00000198758	EPS8L3	EPS8R3	EPS8 like 3	protein-coding
37.0666-2	chr5	11401529	11402179	+	0.133333	NA	intron (NM_001288715, intron 4 of 20)	intron (NM_001288715, intron 4 of 20)	187063	NM_001288716	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
22.0667-10	chr6	153036822	153037127	+	0.133333	NA	intron (NM_012419, intron 2 of 4)	L2|LINE|L2	-34159	NM_001301872	54516	Hs.225836	NM_019041	ENSG00000112031	MTRF1L	HMRF1L|MRF1L|mtRF1a	mitochondrial translational release factor 1 like	protein-coding
27.4-11	chr2	218425643	218425905	+	0.133333	NA	exon (NM_007127, exon 4 of 20)	exon (NM_007127, exon 4 of 20)	6651	NM_007127	7429	Hs.654595	NM_007127	ENSG00000127831	VIL1	D2S1471|VIL	villin 1	protein-coding
8.36665	chr18	40915842	40915904	+	0.133333	NA	Intergenic	Intergenic	604804	NR_002838	641516	Hs.116612	NR_002838	ENSG00000267313	KC6	-	keratoconus gene 6	ncRNA
12.6-9	chr8	121095601	121095741	+	0.133333	NA	Intergenic	Intergenic	-283625	NM_021021	6641	Hs.46701	NM_021021	ENSG00000172164	SNTB1	59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43	syntrophin beta 1	protein-coding
26.7	chr1	21830450	21830841	+	0.133333	NA	intron (NM_005529, intron 85 of 96)	AluSq|SINE|Alu	18380	NM_001013693	401944	Hs.745158	NM_001013693	ENSG00000187942	LDLRAD2	-	low density lipoprotein receptor class A domain containing 2	protein-coding
48.2666	chr8	55337625	55338301	+	0.133333	NA	intron (NM_052898, intron 1 of 2)	intron (NM_052898, intron 1 of 2)	117358	NR_027765	100133234	Hs.729852	NR_027765	ENSG00000248522	SBF1P1	-	SET binding factor 1 pseudogene 1	pseudo
22.3333-15	chr7	133257406	133257579	+	0.133333	NA	intron (NM_021807, intron 1 of 17)	intron (NM_021807, intron 1 of 17)	4414	NM_021807	60412	Hs.321273	NM_021807	ENSG00000131558	EXOC4	SEC8|SEC8L1|Sec8p	exocyst complex component 4	protein-coding
37.6666-2	chr12	121382263	121382701	+	0.133333	NA	Intergenic	AluSc8|SINE|Alu	-17601	NM_001256858	80196	Hs.292804	NM_025126	ENSG00000170633	RNF34	CARP-1|CARP1|RFI|RIF|RIFF|hRFI	ring finger protein 34	protein-coding
20.3-2	chr14	22648980	22649183	+	0.133333	NA	Intergenic	Intergenic	-14237	NM_001348233	79549		NM_001348233	ENSG00000255804	OR6J1	OR6J1P|OR6J2	olfactory receptor family 6 subfamily J member 1 (gene/pseudogene)	protein-coding
49.4-3	chr7	133221785	133222595	+	0.133333	NA	Intergenic	HAL1|LINE|L1	-30877	NM_001037126	60412	Hs.321273	NM_021807	ENSG00000131558	EXOC4	SEC8|SEC8L1|Sec8p	exocyst complex component 4	protein-coding
33.5333-3	chr4	70240820	70241375	+	0.133333	NA	Intergenic	Intergenic	-1519	NM_005212	1448	Hs.54415	NM_005212	ENSG00000171209	CSN3	CNS10|CSN10|CSNK|KCA	casein kappa	protein-coding
19.8666-2	chr14	73392630	73392794	+	0.133333	NA	intron (NM_001005743, intron 2 of 12)	intron (NM_001005743, intron 2 of 12)	65868	NM_001005744	8650	Hs.525443	NM_003744	ENSG00000133961	NUMB	C14orf41|S171|c14_5527	NUMB endocytic adaptor protein	protein-coding
45.4333	chr1	186263150	186263789	+	0.133333	NA	Intergenic	MER90a|LTR|ERV1	-32804	NM_001127709	10216	Hs.647723	NM_005807	ENSG00000116690	PRG4	CACP|HAPO|JCAP|MSF|SZP	proteoglycan 4	protein-coding
15.5-3	chr17	58319327	58319472	+	0.133333	NA	intron (NM_024418, intron 11 of 30)	intron (NM_024418, intron 11 of 30)	-6051	NR_038410	100506779	Hs.718477	NR_038410	ENSG00000265148	TSPOAP1-AS1	BZRAP1-AS1	TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1	ncRNA
24.6333	chr11	11412922	11413258	+	0.133333	NA	intron (NM_001363464, intron 3 of 9)	LTR16C|LTR|ERVL	-59840	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding
37.2-7	chr3	110861304	110861760	+	0.133333	NA	Intergenic	Tigger2a|DNA|TcMar-Tigger	208427	NR_045114	100506555	Hs.535689	NR_045114		NECTIN3-AS1	PVRL3-AS1	NECTIN3 antisense RNA 1	ncRNA
32.8333-3	chr17	53888339	53888648	+	0.133333	NA	Intergenic	L1MA10|LINE|L1	65566	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
32.4666-2	chr12	116870341	116870748	+	0.133333	NA	intron (NR_073189, intron 3 of 4)	AluJo|SINE|Alu	10897	NR_073189	8739	Hs.26605	NM_003806	ENSG00000135116	HRK	DP5|HARAKIRI	harakiri, BCL2 interacting protein	protein-coding
17.5333-5	chr14	60008325	60008536	+	0.133333	NA	intron (NR_075071, intron 23 of 32)	intron (NR_075071, intron 23 of 32)	-83481	NM_022495	64430	Hs.509499	NM_022495	ENSG00000126773	PCNX4	C14orf135|FBP2|PCNXL4	pecanex 4	protein-coding
33.1333-3	chr14	50341880	50342233	+	0.133333	NA	intron (NM_001282236, intron 5 of 8)	intron (NM_001282236, intron 5 of 8)	29732	NM_001003805	27109	Hs.438489	NM_015684	ENSG00000125375	DMAC2L	ATP5S|ATPW|FB|HSU79253	distal membrane arm assembly complex 2 like	protein-coding
22.2666	chr13	108802700	108802929	+	0.133333	NA	intron (NM_015011, intron 6 of 34)	L1MA7|LINE|L1	173203	NM_001198950	23026	Hs.656587	NM_015011	ENSG00000041515	MYO16	MYAP3|MYR8|Myo16b|NYAP3|PPP1R107	myosin XVI	protein-coding
21.8-2	chr10	23710243	23710467	+	0.133333	NA	intron (NM_001098500, intron 1 of 18)	intron (NM_001098500, intron 1 of 18)	15628	NM_001098500	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	ETL4|SKT	KIAA1217	protein-coding
30.5333-4	chr17	53576333	53576774	+	0.133333	NA	Intergenic	Intergenic	-246374	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
31.6333-8	chr4	57138966	57139346	+	0.133333	NA	intron (NR_034081, intron 1 of 4)	MER41-int|LTR|ERV1	-28771	NM_001553	3490	Hs.479808	NM_001553	ENSG00000163453	IGFBP7	AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF	insulin like growth factor binding protein 7	protein-coding
13.6333-3	chr17	78744842	78745070	+	0.133333	NA	intron (NM_004762, intron 1 of 12)	Charlie24|DNA|hAT-Charlie	-8054	NM_001365040	9267	Hs.191215	NM_004762	ENSG00000108669	CYTH1	B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7	cytohesin 1	protein-coding
10.0666	chr8	144073399	144073476	+	0.133333	NA	Intergenic	Intergenic	-5235	NM_019037	54512	Hs.632041	NM_019037	ENSG00000178896	EXOSC4	RRP41|RRP41A|Rrp41p|SKI6|Ski6p|hRrp41p|p12A	exosome component 4	protein-coding
24.4666-3	chr11	42385270	42385701	+	0.133333	NA	Intergenic	Intergenic	-131795	NR_038309	100507205	Hs.99310	NR_038309		LINC02740	-	long intergenic non-protein coding RNA 2740	ncRNA
17.4666-5	chr9	125549706	125549869	+	0.133333	NA	intron (NM_001006619, intron 6 of 10)	intron (NM_001006619, intron 6 of 10)	157421	NM_001006617	79109	Hs.495138	NM_024117	ENSG00000119487	MAPKAP1	JC310|MIP1|SIN1|SIN1b|SIN1g	MAPK associated protein 1	protein-coding
25.5667-12	chr4	45844254	45844555	+	0.133333	NA	Intergenic	AluJo|SINE|Alu	279650	NM_173536	2565	Hs.375051	NM_173536	ENSG00000163285	GABRG1	-	gamma-aminobutyric acid type A receptor gamma1 subunit	protein-coding
33.3333-11	chr9	137541191	137541550	+	0.133333	NA	intron (NM_001098537, intron 7 of 34)	intron (NM_001098537, intron 7 of 34)	9032	NM_152286	375775	Hs.294147	NM_152286	ENSG00000130653	PNPLA7	C9orf111|NTE-R1|NTEL1	patatin like phospholipase domain containing 7	protein-coding
15.7333	chr1	182822692	182822882	+	0.133333	NA	intron (NM_001200056, intron 11 of 12)	intron (NM_001200056, intron 11 of 12)	-16560	NR_033302	1660	Hs.191518	NM_001357	ENSG00000135829	DHX9	DDX9|LKP|NDH2|NDHII|RHA	DExH-box helicase 9	protein-coding
45.7333-7	chr4	47409957	47410358	+	0.133333	NA	intron (NM_000812, intron 8 of 8)	intron (NM_000812, intron 8 of 8)	53545	NM_017845	54951	Hs.23956	NM_017845	ENSG00000169019	COMMD8	-	COMM domain containing 8	protein-coding
34.6667-4	chr14	68400005	68400516	+	0.133333	NA	intron (NM_133509, intron 8 of 10)	intron (NM_133509, intron 8 of 10)	228527	NR_135816	100996664		NR_135816		LOC100996664	-	uncharacterized LOC100996664	ncRNA
23.4-12	chr9	23391822	23392081	+	0.133333	NA	Intergenic	L1MA9|LINE|L1	280448	NR_121602	101929563	Hs.533220	NR_121602	ENSG00000283982	LOC101929563	-	uncharacterized LOC101929563	ncRNA
24.2333-11	chr6	82998963	82999363	+	0.133333	NA	intron (NR_146807, intron 9 of 10)	L2|LINE|L2	66678	NR_146807	90025	Hs.148609	NM_198920	ENSG00000118420	UBE3D	C6orf157|H10BH|UBE2CBP|YJR141W	ubiquitin protein ligase E3D	protein-coding
37.8667-5	chr8	114719811	114720425	+	0.133333	NA	Intergenic	MLT1F2|LTR|ERVL-MaLR	947895	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
34-5	chr3	134651138	134651540	+	0.133333	NA	promoter-TSS (NM_001366276)	promoter-TSS (NM_001366276)	-317	NM_001350860	339855	Hs.146730	NM_178554	ENSG00000174611	KY	MFM7	kyphoscoliosis peptidase	protein-coding
46.6666-4	chr9	34388328	34388744	+	0.133333	NA	intron (NM_032596, intron 1 of 6)	HAL1|LINE|L1	-6947	NM_147169	84688	Hs.50334	NM_032596	ENSG00000164972	C9orf24	CBE1|NYD-SP22|SMRP1|bA573M23.4	chromosome 9 open reading frame 24	protein-coding
24.0333-4	chr10	76639536	76639829	+	0.133333	NA	Intergenic	Intergenic	-248362	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA
23.6-23	chr9	27034739	27035019	+	0.133333	NA	intron (NM_025103, intron 13 of 19)	MIR|SINE|MIR	-29207	NM_022901	64922	Hs.128071	NM_022901	ENSG00000184434	LRRC19	-	leucine rich repeat containing 19	protein-coding
21.7666-3	chr9	36610554	36611026	+	0.133333	NA	intron (NM_001256691, intron 6 of 15)	intron (NM_001256691, intron 6 of 15)	37895	NM_014791	9833	Hs.184339	NM_014791	ENSG00000165304	MELK	HPK38	maternal embryonic leucine zipper kinase	protein-coding
11.4667-8	chr8	140724447	140724641	+	0.133333	NA	intron (NM_001352718, intron 22 of 32)	intron (NM_001352718, intron 22 of 32)	-5975	NM_001352750	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding
14.7666	chr11	73705086	73705336	+	0.133333	NA	intron (NM_001243718, intron 3 of 4)	intron (NM_001243718, intron 3 of 4)	54882	NM_001243719	5870	Hs.503222	NM_002869	ENSG00000175582	RAB6A	RAB6	RAB6A, member RAS oncogene family	protein-coding
37.2-2	chr10	78295188	78295513	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	28008	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA
14.0666-2	chr6	118864537	118864661	+	0.133333	NA	intron (NM_017696, intron 6 of 11)	L1M3de|LINE|L1	-29553	NM_014034	25842	Hs.292316	NM_014034	ENSG00000111875	ASF1A	CGI-98|CIA|HSPC146	anti-silencing function 1A histone chaperone	protein-coding
23.8-14	chr7	49382711	49383000	+	0.133333	NA	Intergenic	Intergenic	-390783	NM_198570	375567	Hs.629302	NM_198570	ENSG00000188730	VWC2	PSST739|UNQ739	von Willebrand factor C domain containing 2	protein-coding
20.2666-2	chr11	63739530	63739692	+	0.133333	NA	intron (NM_001265589, intron 3 of 8)	intron (NM_001265589, intron 3 of 8)	29164	NM_001144936	65998	Hs.191073	NM_001144936	ENSG00000188070	C11orf95	-	chromosome 11 open reading frame 95	protein-coding
22.8-16	chr7	813221	813455	+	0.133333	NA	Intergenic	CpG	-2219	NM_001171946	23353	Hs.438072	NM_025154	ENSG00000164828	SUN1	UNC84A	Sad1 and UNC84 domain containing 1	protein-coding
21.4333-4	chr10	120375991	120376411	+	0.133333	NA	Intergenic	Intergenic	-20978	NM_000982	6144	Hs.381123	NM_000982	ENSG00000122026	RPL21	HYPT12|L21	ribosomal protein L21	protein-coding
28.2333-11	chr6	3317530	3317806	+	0.133333	NA	intron (NM_021945, intron 5 of 10)	intron (NM_021945, intron 5 of 10)	58721	NM_001128592	389362	Hs.207069	NM_001128591	ENSG00000180822	PSMG4	C6orf86|PAC4|bA506K6.2	proteasome assembly chaperone 4	protein-coding
32.2666-6	chr8	113623313	113623678	+	0.133333	NA	Intergenic	Intergenic	-186556	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
60.4333	chr2	218826324	218827049	+	0.133333	NA	intron (NM_017431, intron 10 of 13)	MIRc|SINE|MIR	3596	NR_128707	103504730		NR_128707	ENSG00000283639	MIR9500	hsa-mir-9500	microRNA 9500	ncRNA
34.0333-3	chr17	53989529	53989976	+	0.133333	NA	Intergenic	MER21-int|LTR|ERVL	166825	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
15.9333-6	chr2	101302668	101302891	+	0.133333	NA	intron (NM_173647, intron 1 of 6)	AluJr|SINE|Alu	5922	NM_173647	284996	Hs.142074	NM_173647	ENSG00000163162	RNF149	DNAPTP2	ring finger protein 149	protein-coding
37.6666-3	chr3	94621353	94621889	+	0.133333	NA	Intergenic	Intergenic	-316642	NR_015400	255025	Hs.130994	NR_015400	ENSG00000239589	LINC00879	-	long intergenic non-protein coding RNA 879	ncRNA
22.6666	chr13	64737848	64738182	+	0.133333	NA	Intergenic	MER57-int|LTR|ERV1	-662004	NR_145420	144766	Hs.719557	NR_145420	ENSG00000227674	LINC00355	-	long intergenic non-protein coding RNA 355	ncRNA
24.9-9	chr3	18790807	18791036	+	0.133333	NA	Intergenic	Intergenic	-345329	NM_001322874	6304	Hs.517717	NM_002971	ENSG00000182568	SATB1	-	SATB homeobox 1	protein-coding
35.1333-5	chr2	203968981	203969433	+	0.133333	NA	Intergenic	LTR33|LTR|ERVL	32459	NM_012092	29851	Hs.56247	NM_012092	ENSG00000163600	ICOS	AILIM|CD278|CVID1	inducible T cell costimulator	protein-coding
19.2-10	chr5	23072701	23073055	+	0.133333	NA	Intergenic	Intergenic	-219534	NM_001364104	1010	Hs.113684	NM_004061	ENSG00000154162	CDH12	CDHB	cadherin 12	protein-coding
18.3333-15	chr9	71968382	71968683	+	0.133333	NA	intron (NM_001365057, intron 2 of 2)	L1MEc|LINE|L1	56893	NM_001365053	138241	Hs.534190	NM_182505	ENSG00000155621	C9orf85	-	chromosome 9 open reading frame 85	protein-coding
34.4999	chr14	48279429	48279734	+	0.133333	NA	Intergenic	L1M4b|LINE|L1	-484567	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
29.0999	chr17	61550597	61551112	+	0.133333	NA	Intergenic	Intergenic	40365	NM_199290	342538	Hs.591178	NM_199290	ENSG00000253506	NACA2	ANAC|NACAL	nascent polypeptide associated complex subunit alpha 2	protein-coding
36.7667-5	chr4	127737903	127738255	+	0.133333	NA	intron (NM_001318467, intron 1 of 6)	AluJb|SINE|Alu	7679	NM_001318467	83447	Hs.149030	NM_031291	ENSG00000151475	SLC25A31	AAC4|ANT 4|ANT4|SFEC35kDa	solute carrier family 25 member 31	protein-coding
25.9333	chr12	7656285	7656608	+	0.133333	NA	intron (NM_001304566, intron 2 of 5)	intron (NM_001304566, intron 2 of 5)	9462	NM_005889	339	Hs.560	NM_001644	ENSG00000111701	APOBEC1	APOBEC-1|BEDP|CDAR1|HEPR	apolipoprotein B mRNA editing enzyme catalytic subunit 1	protein-coding
20.6666-9	chr8	142235128	142235296	+	0.133333	NA	intron (NM_001366901, intron 12 of 13)	intron (NM_001366901, intron 12 of 13)	36856	NR_024378	619434	Hs.393308	NR_024378	ENSG00000254008	LINC00051	C8orf43|NCRNA00051	long intergenic non-protein coding RNA 51	ncRNA
22.6-9	chr17	80073584	80073861	+	0.133333	NA	intron (NM_017950, intron 10 of 19)	AluSx1|SINE|Alu	-25106	NR_039607	100616121		NR_039607	ENSG00000265561	MIR1268B	-	microRNA 1268b	ncRNA
26.7999	chr14	46849040	46849386	+	0.133333	NA	intron (NM_001113498, intron 15 of 16)	intron (NM_001113498, intron 15 of 16)	-197432	NM_080746	140801	Hs.308332	NM_080746	ENSG00000165496	RPL10L	RPL10_5_1358	ribosomal protein L10 like	protein-coding
43.3333-5	chr8	115748360	115748871	+	0.133333	NA	Intergenic	Intergenic	-79640	NM_014112	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
13.2667-7	chr2	175198553	175198745	+	0.133333	NA	Intergenic	Intergenic	-16939	NM_001689	518	Hs.429	NM_001689	ENSG00000154518	ATP5MC3	ATP5G3|P3	ATP synthase membrane subunit c locus 3	protein-coding
20.4-2	chr10	1109118	1109314	+	0.133333	NA	intron (NM_014023, intron 11 of 13)	intron (NM_014023, intron 11 of 13)	-50552	NR_015376	399706	Hs.721191	NM_001010910	ENSG00000229205	LINC00200	C10orf139|NCRNA00200	long intergenic non-protein coding RNA 200	ncRNA
19.6333-6	chr2	123390479	123390860	+	0.133333	NA	Intergenic	Intergenic	-317188	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
20.8666-5	chr3	34337115	34337410	+	0.133333	NA	Intergenic	Intergenic	538632	NM_013374	10015	Hs.475896	NM_013374	ENSG00000170248	PDCD6IP	AIP1|ALIX|DRIP4|HP95	programmed cell death 6 interacting protein	protein-coding
20.3333-5	chr10	97641794	97642077	+	0.133333	NA	intron (NM_018425, intron 1 of 8)	intron (NM_018425, intron 1 of 8)	1249	NM_018425	55361	Hs.25300	NM_018425	ENSG00000155252	PI4K2A	PI4KII|PIK42A	phosphatidylinositol 4-kinase type 2 alpha	protein-coding
23.3333-5	chr19	29500807	29501080	+	0.133333	NA	intron (NR_040029, intron 1 of 9)	intron (NR_040029, intron 1 of 9)	24809	NR_040029	284395	Hs.631601	NR_040029	ENSG00000264515	LOC284395	-	uncharacterized LOC284395	ncRNA
10.8-4	chr2	49586549	49586646	+	0.133333	NA	Intergenic	Intergenic	387606	NM_001320156	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
19.1666	chr1	181609618	181609892	+	0.133333	NA	intron (NM_001205293, intron 6 of 47)	MIRb|SINE|MIR	126238	NM_001205294	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding
42.3333-3	chr5	133261150	133261532	+	0.133333	NA	intron (NM_015082, intron 6 of 15)	intron (NM_015082, intron 6 of 15)	166365	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA
28.6-21	chr4	114773879	114774385	+	0.133333	NA	Intergenic	L1MA4|LINE|L1	117373	NR_030303	693162		NR_030303	ENSG00000207931	MIR577	MIRN577|hsa-mir-577|mir-577	microRNA 577	ncRNA
10.9333-3	chr1	177284804	177285014	+	0.133333	NA	Intergenic	Intergenic	-66677	NR_126001	102724661	Hs.146628	NR_126001		LINC01645	-	long intergenic non-protein coding RNA 1645	ncRNA
31.8-7	chr22	26968943	26969383	+	0.133333	NA	Intergenic	Intergenic	65871	NR_110540	101929539	Hs.517505	NR_110540	ENSG00000235271	LINC01422	-	long intergenic non-protein coding RNA 1422	ncRNA
14.8-15	chr8	93575843	93575994	+	0.133333	NA	intron (NR_033858, intron 5 of 10)	intron (NR_033858, intron 5 of 10)	124515	NR_033858	642924	Hs.434882	NR_033858	ENSG00000246662	LINC00535	-	long intergenic non-protein coding RNA 535	ncRNA
30.5999	chr21	19711621	19711868	+	0.133333	NA	Intergenic	L2a|LINE|L2	188011	NR_146910	105372746	Hs.580899	NR_146910	ENSG00000233480	LINC01683	C21orf40	long intergenic non-protein coding RNA 1683	ncRNA
30.9333-5	chr22	26652228	26652836	+	0.133333	NA	Intergenic	AluSg|SINE|Alu	-4950	NR_033319	440823	Hs.517502	NR_003491	ENSG00000225783	MIAT	C22orf35|GOMAFU|LINC00066|NCRNA00066|RNCR2|lncRNA-MIAT	myocardial infarction associated transcript	ncRNA
29.9333-4	chr13	29752251	29752630	+	0.133333	NA	Intergenic	CR1-L3A_Croc|LINE|CR1	98177	NM_007106	5412	Hs.145575	NM_007106	ENSG00000122042	UBL3	HCG-1|PNSC1	ubiquitin like 3	protein-coding
21.6-6	chr2	84946170	84946394	+	0.133333	NA	Intergenic	Intergenic	-24879	NM_020122	56888	Hs.654968	NM_020122	ENSG00000176407	KCMF1	DEBT91|FIGC|PCMF|ZZZ1	potassium channel modulatory factor 1	protein-coding
31.2333-4	chr2	70619209	70619507	+	0.133333	NA	Intergenic	L2a|LINE|L2	-65532	NM_001099691	7039	Hs.170009	NM_003236	ENSG00000163235	TGFA	TFGA	transforming growth factor alpha	protein-coding
16.6-13	chr6	51810277	51810468	+	0.133333	NA	intron (NM_138694, intron 52 of 66)	LTR84b|LTR|ERVL	188502	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
29.5333-3	chr18	3257068	3257529	+	0.133333	NA	intron (NR_130144, intron 1 of 2)	AluJb|SINE|Alu	4520	NR_130144	104968399	Hs.464472	NR_130143	ENSG00000264235	LOC104968399	-	uncharacterized LOC104968399	ncRNA
29.6-3	chr11	33811469	33811737	+	0.133333	NA	Intergenic	L1ME3|LINE|L1	36904	NR_120550	101928440	Hs.202343	NR_120550	ENSG00000254508	FBXO3-DT	FBXO3-AS1	FBXO3 divergent transcript	ncRNA
18.2-13	chr3	82965041	82965304	+	0.133333	NA	Intergenic	L1ME1|LINE|L1	979030	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
39.9333-3	chr12	1993909	1994391	+	0.133333	NA	intron (NM_001319292, intron 2 of 2)	intron (NM_001319292, intron 2 of 2)	10307	NM_152640	196513	Hs.130934	NM_152640	ENSG00000151065	DCP1B	DCP1	decapping mRNA 1B	protein-coding
60.9999	chr3	5654997	5655590	+	0.133333	NA	Intergenic	Intergenic	-405038	NR_039953	100616334		NR_039953	ENSG00000265180	MIR4790	-	microRNA 4790	ncRNA
47.5333	chr1	97254143	97254802	+	0.133333	NA	intron (NM_000110, intron 18 of 22)	intron (NM_000110, intron 18 of 22)	158549	NR_046590	100873932	Hs.682651	NR_046590	ENSG00000232878	DPYD-AS1	-	DPYD antisense RNA 1	ncRNA
38.4666-4	chr9	35629106	35629530	+	0.133333	NA	Intergenic	L1ME2z|LINE|L1	-10905	NM_001782	971	Hs.116481	NM_001782	ENSG00000137101	CD72	CD72b|LYB2	CD72 molecule	protein-coding
39.8-6	chr9	25522841	25523224	+	0.133333	NA	Intergenic	Intergenic	155826	NM_001004125	286319	Hs.26268	NM_001004125	ENSG00000198680	TUSC1	CCDC89B|TSG-9|TSG9	tumor suppressor candidate 1	protein-coding
46.3333	chr1	118820753	118821226	+	0.133333	NA	Intergenic	Intergenic	167354	NM_001330677	6913	Hs.146196	NM_152380	ENSG00000092607	TBX15	TBX14	T-box transcription factor 15	protein-coding
37.2667-6	chr5	160792249	160792790	+	0.133333	NA	intron (NM_001366652, intron 1 of 24)	MLT1J|LTR|ERVL-MaLR	59692	NM_001366654	23120	Hs.109358	NM_025153	ENSG00000118322	ATP10B	ATPVB	ATPase phospholipid transporting 10B (putative)	protein-coding
20.9666-2	chr17	61865377	61865738	+	0.133333	NA	3' UTR (NM_020748, exon 25 of 25)	3' UTR (NM_020748, exon 25 of 25)	-1998	NM_032043	83990	Hs.128903	NM_032043	ENSG00000136492	BRIP1	BACH1|FANCJ|OF	BRCA1 interacting protein C-terminal helicase 1	protein-coding
23.6-20	chr8	88921566	88921905	+	0.133333	NA	Intergenic	Intergenic	-594252	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
42.8666	chr1	109124971	109125463	+	0.133333	NA	intron (NM_001284352, intron 1 of 20)	AluSx1|SINE|Alu	11102	NM_001284352	57535	Hs.708190	NM_020775	ENSG00000116299	KIAA1324	EIG121	KIAA1324	protein-coding
27.7666	chr1	35028833	35029353	+	0.133333	NA	intron (NM_007167, intron 2 of 15)	AluSq2|SINE|Alu	2852	NM_007167	9204	Hs.533986	NM_007167	ENSG00000163867	ZMYM6	Buster2|MYM|ZBED7|ZNF198L4|ZNF258	zinc finger MYM-type containing 6	protein-coding
46.6-6	chr6	147158283	147158822	+	0.133333	NA	promoter-TSS (NR_132442)	promoter-TSS (NR_132442)	-373	NR_132442	106182249	Hs.575390	NR_132442	ENSG00000196634	LUADT1	-	lung adenocarcinoma associated transcript 1	ncRNA
19.1-8	chr17	79006282	79006473	+	0.133333	NA	intron (NM_001159772, intron 1 of 5)	MLT1D|LTR|ERVL-MaLR	3387	NM_138793	124583	Hs.8859	NM_138793	ENSG00000171302	CANT1	DBQD|DBQD1|EDM7|SCAN-1|SCAN1|SHAPY	calcium activated nucleotidase 1	protein-coding
27.6333-10	chr7	86301231	86301647	+	0.133333	NA	Intergenic	Intergenic	-342470	NM_001363522	2913	Hs.590575	NM_000840	ENSG00000198822	GRM3	GLUR3|GPRC1C|MGLUR3|mGlu3	glutamate metabotropic receptor 3	protein-coding
30.3333-6	chr5	107971738	107972001	+	0.133333	NA	intron (NM_001163315, intron 7 of 8)	L2c|LINE|L2	-300932	NM_001962	1946	Hs.288741	NM_001962	ENSG00000184349	EFNA5	AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS	ephrin A5	protein-coding
20.8-8	chr16	73896646	73896943	+	0.133333	NA	Intergenic	Charlie21a|DNA|hAT-Charlie	318727	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA
32.9666-6	chr5	37109071	37109549	+	0.133333	NA	intron (NM_023073, intron 50 of 51)	intron (NM_023073, intron 50 of 51)	-139736	NR_134263	105374727	Hs.170993	NR_134263	ENSG00000286193	LOC105374727	-	uncharacterized LOC105374727	ncRNA
21.2666	chr10	133067102	133067286	+	0.133333	NA	Intergenic	Intergenic	19503	NR_111905	100128127	Hs.694139	NR_111905		ADGRA1-AS1	GPR123-AS1	adhesion G protein-coupled receptor A1 antisense RNA 1	ncRNA
28.0667-7	chr2	162331003	162331390	+	0.133333	NA	intron (NM_001330265, intron 2 of 8)	Tigger17a|DNA|TcMar-Tigger	12214	NM_001330267	25801	Hs.377894	NM_012198	ENSG00000115271	GCA	GCL	grancalcin	protein-coding
28-3	chr16	62484004	62484374	+	0.133333	NA	Intergenic	L2c|LINE|L2	-447751	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
23.8333-6	chr4	87904037	87904215	+	0.133333	NA	Intergenic	Intergenic	69423	NM_001291183	56955	Hs.676357	NM_020203	ENSG00000152595	MEPE	OF45	matrix extracellular phosphoglycoprotein	protein-coding
36.5666	chr14	56913689	56914080	+	0.133333	NA	intron (NR_029385, intron 3 of 3)	L2c|LINE|L2	100726	NR_029385	100309464	Hs.637962	NR_029385	ENSG00000248550	OTX2-AS1	OTX2OS1	OTX2 antisense RNA 1 (head to head)	ncRNA
21.2-15	chr2	156466672	156466941	+	0.133333	NA	intron (NM_000408, intron 1 of 16)	intron (NM_000408, intron 1 of 16)	30427	NM_000408	2820	Hs.512382	NM_000408	ENSG00000115159	GPD2	GDH2|GPDM|mGPDH	glycerol-3-phosphate dehydrogenase 2	protein-coding
37.1333-6	chr2	209447712	209448321	+	0.133333	NA	intron (NM_001039538, intron 1 of 14)	MER5A1|DNA|hAT-Charlie	23969	NM_001363910	4133	Hs.368281	NM_002374	ENSG00000078018	MAP2	MAP-2|MAP2A|MAP2B|MAP2C	microtubule associated protein 2	protein-coding
29.9333	chr10	66283209	66283576	+	0.133333	NA	intron (NM_001127384, intron 12 of 17)	intron (NM_001127384, intron 12 of 17)	-642644	NM_178011	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding
27.7333-2	chr13	61696525	61696820	+	0.133333	NA	Intergenic	MLT1F2-int|LTR|ERVL-MaLR	-268726	NR_134946	101926951	Hs.732367	NR_134946	ENSG00000279797	LINC02339	-	long intergenic non-protein coding RNA 2339	ncRNA
18.9333-12	chr5	127684237	127684469	+	0.133333	NA	Intergenic	Intergenic	-19036	NM_001317938	728586	Hs.582532	NM_001317938	ENSG00000230561	CCDC192	LINC01183	coiled-coil domain containing 192	protein-coding
29.7333-14	chr5	42337269	42337618	+	0.133333	NA	Intergenic	L1MA4A|LINE|L1	-85996	NM_000163	2690	Hs.125180	NM_000163	ENSG00000112964	GHR	GHBP|GHIP	growth hormone receptor	protein-coding
30.4999	chr5	24766483	24767055	+	0.133333	NA	Intergenic	Intergenic	73814	NR_037896	340107	Hs.145181	NR_037896	ENSG00000248908	LINC02239	-	long intergenic non-protein coding RNA 2239	ncRNA
50.8666-3	chr6	92053475	92053960	+	0.133333	NA	Intergenic	Intergenic	-363289	NR_104154	101929083	Hs.586238	NR_104154		CASC6	-	cancer susceptibility 6	ncRNA
44.6-3	chr19	30374145	30374678	+	0.133333	NA	intron (NM_014717, intron 1 of 4)	intron (NM_014717, intron 1 of 4)	2027	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding
28.2333-12	chr7	27281043	27281622	+	0.133333	NA	Intergenic	Intergenic	-34103	NR_120507	101410536	Hs.687800	NR_120507	ENSG00000253405	EVX1-AS	EVX1-AS1	EVX1 antisense RNA	ncRNA
20.6667-10	chr18	12308537	12308818	+	0.133333	NA	intron (NM_001303527, intron 1 of 2)	CpG	436	NM_001303530	84617	Hs.193491	NM_032525	ENSG00000176014	TUBB6	FPVEPD|HsT1601|TUBB-5	tubulin beta 6 class V	protein-coding
32.4	chr1	114662136	114662520	+	0.133333	NA	intron (NM_001256404, intron 1 of 20)	intron (NM_001256404, intron 1 of 20)	7721	NM_198459	163259	Hs.654928	NM_198459	ENSG00000175984	DENND2C	dJ1156J9.1	DENN domain containing 2C	protein-coding
25.6-8	chr5	9176578	9176811	+	0.133333	NA	intron (NM_003966, intron 11 of 22)	intron (NM_003966, intron 11 of 22)	-122799	NR_039779	100616326		NR_039779	ENSG00000266415	MIR4636	mir-4636	microRNA 4636	ncRNA
32.9999	chr16	234990	235299	+	0.133333	NA	intron (NM_032039, intron 1 of 12)	CpG	323	NM_001284497	83986	Hs.513225	NM_032039	ENSG00000167930	FAM234A	C16orf9|ITFG3|gs19	family with sequence similarity 234 member A	protein-coding
16.3333-12	chr8	141928813	141928957	+	0.133333	NA	Intergenic	MER20|DNA|hAT-Charlie	-142572	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA
15.0333	chr1	8969344	8969523	+	0.133333	NA	intron (NM_001270501, intron 5 of 6)	L1MEd|LINE|L1	23565	NM_001270502	765	Hs.100322	NM_001215	ENSG00000131686	CA6	CA-VI|GUSTIN	carbonic anhydrase 6	protein-coding
19.8-20	chr6	62639369	62639542	+	0.133333	NA	Intergenic	Intergenic	-353228	NR_146870	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
13.1-10	chr8	131132105	131132356	+	0.133333	NA	Intergenic	Intergenic	-91321	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
27.2-13	chr8	142076243	142076598	+	0.133333	NA	Intergenic	Intergenic	-99919	NR_039682	100616268		NR_039682	ENSG00000265247	MIR4472-1	-	microRNA 4472-1	ncRNA
11.3333-11	chr9	128170020	128170119	+	0.133333	NA	exon (NM_001131018, exon 12 of 17)	exon (NM_001131018, exon 12 of 17)	9804	NM_024112	79095	Hs.522412	NM_024112	ENSG00000171159	C9orf16	EST00098	chromosome 9 open reading frame 16	protein-coding
13.4333-6	chr3	87035849	87036007	+	0.133333	NA	Intergenic	L2c|LINE|L2	-44779	NM_016206	389136	Hs.606507	NM_016206	ENSG00000206538	VGLL3	VGL-3|VGL3	vestigial like family member 3	protein-coding
34.6333-2	chr15	56146212	56146742	+	0.133333	NA	intron (NM_001368073, intron 2 of 8)	intron (NM_001368073, intron 2 of 8)	43455	NM_001370554	64864	Hs.745089	NM_022841	ENSG00000181827	RFX7	RFXDC2	regulatory factor X7	protein-coding
30	chr1	44337861	44338228	+	0.133333	NA	intron (NM_001301701, intron 2 of 7)	intron (NM_001301701, intron 2 of 7)	17213	NM_024066	79033	Hs.731413	NM_024066	ENSG00000117419	ERI3	PINT1|PRNPIP	ERI1 exoribonuclease family member 3	protein-coding
15.2-8	chr8	53147072	53147218	+	0.133333	NA	Intergenic	Charlie1a|DNA|hAT-Charlie	104492	NM_001318497	4986	Hs.106795	NM_000912	ENSG00000082556	OPRK1	K-OR-1|KOR|KOR-1|OPRK	opioid receptor kappa 1	protein-coding
35.0666	chr1	38711399	38711918	+	0.133333	NA	Intergenic	L1MC|LINE|L1	148114	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding
32.9666	chr13	71104050	71104490	+	0.133333	NA	intron (NR_047699, intron 1 of 3)	L1PA5|LINE|L1	89129	NR_047699	100885781	Hs.372660	NR_047699	ENSG00000226846	LINC00348	-	long intergenic non-protein coding RNA 348	ncRNA
16.8666-4	chr7	41400911	41401168	+	0.133333	NA	Intergenic	Intergenic	-292880	NR_027118	285954	Hs.656869	NR_027118	ENSG00000224116	INHBA-AS1	-	INHBA antisense RNA 1	ncRNA
20.6333	chr1	104856520	104856743	+	0.133333	NA	Intergenic	MLT1G3|LTR|ERVL-MaLR	762304	NR_125954	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
20.9333-4	chr11	108161102	108161345	+	0.133333	NA	exon (NM_002519, exon 17 of 18)	exon (NM_002519, exon 17 of 18)	39656	NM_000019	38	Hs.232375	NM_000019	ENSG00000075239	ACAT1	ACAT|MAT|T2|THIL	acetyl-CoA acetyltransferase 1	protein-coding
13.6-2	chr15	53745354	53745484	+	0.133333	NA	intron (NR_102334, intron 1 of 19)	intron (NR_102334, intron 1 of 19)	14244	NM_182758	256764	Hs.122125	NM_182758	ENSG00000166415	WDR72	AI2A3	WD repeat domain 72	protein-coding
64.7332	chr5	119656710	119657419	+	0.133333	NA	Intergenic	Intergenic	27505	NM_001163991	340069	Hs.713304	NM_182761	ENSG00000164334	FAM170A	ZNFD	family with sequence similarity 170 member A	protein-coding
40.0666-2	chr10	95973320	95973740	+	0.133333	NA	intron (NM_001349008, intron 16 of 34)	intron (NM_001349008, intron 16 of 34)	-26561	NM_001001732	387707	Hs.652240	NM_001001732	ENSG00000188649	CC2D2B	C10orf130|C10orf131	coiled-coil and C2 domain containing 2B	protein-coding
29-6	chr17	79840107	79840460	+	0.133333	NA	promoter-TSS (NM_003655)	promoter-TSS (NM_003655)	-843	NM_003655	8535	Hs.405046	NM_003655	ENSG00000141582	CBX4	NBP16|PC2	chromobox 4	protein-coding
20-7	chr5	40169735	40169915	+	0.133333	NA	Intergenic	L1PA16|LINE|L1	117534	NR_104633	102467077	Hs.148993	NR_104633		LINC00603	-	long intergenic non-protein coding RNA 603	ncRNA
24.2667-10	chr5	177165422	177165648	+	0.133333	NA	intron (NM_172349, intron 3 of 23)	L1M4|LINE|L1	31306	NM_001365684	64324	Hs.106861	NM_022455	ENSG00000165671	NSD1	ARA267|KMT3B|SOTOS|SOTOS1|STO	nuclear receptor binding SET domain protein 1	protein-coding
21.6-4	chr12	124814302	124814603	+	0.133333	NA	intron (NR_160424, intron 3 of 11)	intron (NR_160424, intron 3 of 11)	25219	NM_001367982	949	Hs.731377	NM_005505	ENSG00000073060	SCARB1	CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1	scavenger receptor class B member 1	protein-coding
39.9333-2	chr11	110871369	110871933	+	0.133333	NA	Intergenic	Intergenic	-158462	NM_001258418	57569	Hs.6136	NM_020809	ENSG00000137727	ARHGAP20	RARHOGAP	Rho GTPase activating protein 20	protein-coding
9.19998	chr2	197539272	197539355	+	0.133333	NA	intron (NM_199482, intron 3 of 7)	intron (NM_199482, intron 3 of 7)	23015	NM_001204094	25843	Hs.633165	NM_015387	ENSG00000115540	MOB4	2C4D|CGI-95|MOB1|MOB3|MOBKL3|PHOCN|PREI3	MOB family member 4, phocein	protein-coding
26.9333-12	chr2	136015702	136016030	+	0.133333	NA	Intergenic	Intergenic	-30182	NM_001293312	1615	Hs.503787	NM_001349	ENSG00000115866	DARS	HBSL|aspRS	aspartyl-tRNA synthetase	protein-coding
32.3666-5	chr18	9318656	9319036	+	0.133333	NA	Intergenic	L2b|LINE|L2	-15927	NM_020648	57045	Hs.514685	NM_020648	ENSG00000128791	TWSG1	TSG	twisted gastrulation BMP signaling modulator 1	protein-coding
26.3333-3	chr16	12197408	12197605	+	0.133333	NA	intron (NM_032167, intron 13 of 20)	AluSx1|SINE|Alu	220772	NM_032167	92017	Hs.458401	NM_032167	ENSG00000048471	SNX29	A-388D4.1|RUNDC2A	sorting nexin 29	protein-coding
27.4-10	chr2	164467372	164467702	+	0.133333	NA	Intergenic	AluSq2|SINE|Alu	100958	NM_001303422	2888	Hs.411881	NM_004490	ENSG00000115290	GRB14	-	growth factor receptor bound protein 14	protein-coding
37.4333-10	chr21	29751798	29752509	+	0.133333	NA	intron (NR_027021, intron 2 of 4)	intron (NR_027021, intron 2 of 4)	3978	NR_027021	642976	Hs.473554	NR_027021		GRIK1-AS1	C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110	GRIK1 antisense RNA 1	ncRNA
35.3333-2	chr10	122550841	122551174	+	0.133333	NA	Intergenic	Intergenic	-9658	NM_017579	1755	Hs.279611	NM_004406	ENSG00000187908	DMBT1	GP340|SAG|SALSA|muclin	deleted in malignant brain tumors 1	protein-coding
25.1333-16	chr8	82271670	82271927	+	0.133333	NA	Intergenic	Intergenic	-429512	NM_022133	64089	Hs.492121	NM_022133	ENSG00000104497	SNX16	-	sorting nexin 16	protein-coding
44.2333	chr5	103849530	103850317	+	0.133333	NA	Intergenic	Intergenic	-287134	NM_001300741	83594	Hs.434289	NM_031438	ENSG00000112874	NUDT12	-	nudix hydrolase 12	protein-coding
34.5666-6	chr7	37147712	37148033	+	0.133333	NA	intron (NM_001206480, intron 13 of 21)	intron (NM_001206480, intron 13 of 21)	150076	NR_104120	100861514	Hs.627775	NR_104120	ENSG00000224101	ELMO1-AS1	-	ELMO1 antisense RNA 1	ncRNA
22.8666	chr1	79192682	79192877	+	0.133333	NA	Intergenic	Intergenic	-186049	NM_022159	64123	Hs.132314	NM_022159	ENSG00000162618	ADGRL4	ELTD1|ETL|KPG_003	adhesion G protein-coupled receptor L4	protein-coding
20.7333-5	chr11	8378496	8378689	+	0.133333	NA	Intergenic	THE1C|LTR|ERVL-MaLR	-109805	NM_001270428	4004	Hs.654426	NM_002315	ENSG00000166407	LMO1	RBTN1|RHOM1|TTG1	LIM domain only 1	protein-coding
20.2667-7	chr5	92325738	92325995	+	0.133333	NA	Intergenic	Intergenic	-942549	NM_020801	57561	Hs.24684	NM_020801	ENSG00000113369	ARRDC3	TLIMP	arrestin domain containing 3	protein-coding
33.1333-6	chr2	102077949	102078305	+	0.133333	NA	intron (NM_001320978, intron 1 of 11)	L1MB7|LINE|L1	7737	NM_001288706	3554	Hs.701982	NM_000877	ENSG00000115594	IL1R1	CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80	interleukin 1 receptor type 1	protein-coding
19.0666	chr11	15100287	15100452	+	0.133333	NA	Intergenic	Intergenic	-12055	NM_001031853	387755	Hs.591997	NM_001031853	ENSG00000188487	INSC	-	INSC spindle orientation adaptor protein	protein-coding
22.8-11	chr2	154222720	154222975	+	0.133333	NA	intron (NM_052917, intron 4 of 12)	intron (NM_052917, intron 4 of 12)	234591	NR_161181	100144595	Hs.683952	NR_161181		LOC100144595	-	uncharacterized LOC100144595	ncRNA
12.1333-4	chr5	28460013	28460130	+	0.133333	NA	Intergenic	L1MC4|LINE|L1	-172406	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
27.8666	chr10	22420429	22421024	+	0.133333	NA	Intergenic	Intergenic	17203	NR_036533	100499489	Hs.7444	NR_036533		LOC100499489	-	uncharacterized LOC100499489	ncRNA
29.5333	chr10	126078660	126079077	+	0.133333	NA	intron (NM_001288974, intron 11 of 18)	intron (NM_001288974, intron 11 of 18)	-105595	NR_102707	101410540	Hs.557889	NR_102707	ENSG00000233409	FANK1-AS1	-	FANK1 antisense RNA 1	ncRNA
27.8-9	chr20	12713252	12713621	+	0.133333	NA	Intergenic	Intergenic	223527	NR_109872	102606466	Hs.602196	NR_109872		LOC102606466	-	uncharacterized LOC102606466	ncRNA
35.6666	chr1	119915028	119915719	+	0.133333	NA	exon (NM_024408, exon 34 of 34)	exon (NM_024408, exon 34 of 34)	-18858	NM_021794	11085	Hs.283011	NM_021794	ENSG00000134249	ADAM30	svph4	ADAM metallopeptidase domain 30	protein-coding
52.1333-6	chr8	25716706	25717233	+	0.133333	NA	Intergenic	L1ME4a|LINE|L1	257736	NM_152562	157313	Hs.33366	NM_152562	ENSG00000184661	CDCA2	PPP1R81|Repo-Man	cell division cycle associated 2	protein-coding
18.7333-21	chr8	8444736	8444917	+	0.133333	NA	Intergenic	Intergenic	-58387	NR_163138	157285	Hs.583863	NM_001080826	ENSG00000275342	PRAG1	NACK|PEAK2|PRAGMIN|SGK223	PEAK1 related, kinase-activating pseudokinase 1	protein-coding
34.7333	chr1	47901945	47902478	+	0.133333	NA	intron (NM_001194986, intron 2 of 6)	intron (NM_001194986, intron 2 of 6)	95174	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding
27.3333-4	chr17	57487343	57487708	+	0.133333	NA	intron (NM_001322250, intron 6 of 13)	L2c|LINE|L2	36072	NR_110808	101927557	Hs.639984	NR_110808	ENSG00000266100	LOC101927557	-	uncharacterized LOC101927557	ncRNA
28.7333-12	chr3	157048357	157048692	+	0.133333	NA	Intergenic	Intergenic	-33317	NR_135546	105374177	Hs.634263	NR_135546	ENSG00000241544	LINC02029	-	long intergenic non-protein coding RNA 2029	ncRNA
30.3333-11	chr9	132330875	132331128	+	0.133333	NA	intron (NM_001351527, intron 9 of 25)	intron (NM_001351527, intron 9 of 25)	23855	NM_001351527	23064	Hs.460317	NM_015046	ENSG00000107290	SETX	ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2	senataxin	protein-coding
27.7333-11	chr7	32090883	32091274	+	0.133333	NA	intron (NM_001322059, intron 3 of 17)	L2b|LINE|L2	-19642	NM_001322055	5137	Hs.143821	NM_005020	ENSG00000154678	PDE1C	DFNA74|Hcam3|cam-PDE 1C|hCam-3	phosphodiesterase 1C	protein-coding
28.2-11	chr2	120240803	120241089	+	0.133333	NA	Intergenic	Intergenic	-11906	NM_001369400	5899	Hs.469820	NM_002881	ENSG00000144118	RALB	-	RAS like proto-oncogene B	protein-coding
65.7666	chr11	45271164	45272136	+	0.133333	NA	intron (NM_001247987, intron 1 of 7)	L2c|LINE|L2	14691	NM_020826	57586	Hs.436643	NM_020826	ENSG00000019505	SYT13	-	synaptotagmin 13	protein-coding
59.5999	chr20	11739973	11740489	+	0.133333	NA	Intergenic	L1M4|LINE|L1	130484	NR_110635	728450	Hs.560990	NR_110635	ENSG00000228422	LINC00687	C20orf61|dJ1012F16.1	long intergenic non-protein coding RNA 687	ncRNA
28.1666-3	chr12	8583717	8584201	+	0.133333	NA	Intergenic	Tigger12c|DNA|TcMar-Tigger	28900	NM_020661	57379	Hs.149342	NM_020661	ENSG00000111732	AICDA	AID|ARP2|CDA2|HEL-S-284|HIGM2	activation induced cytidine deaminase	protein-coding
32.8999	chr15	66943089	66943335	+	0.133333	NA	intron (NR_135687, intron 1 of 2)	intron (NR_135687, intron 1 of 2)	13303	NR_135687	102723481	Hs.512978	NR_135687	ENSG00000259289	LINC02206	-	long intergenic non-protein coding RNA 2206	ncRNA
33.8999-2	chr6	2983391	2983682	+	0.133333	NA	Intergenic	Intergenic	-4431	NR_026856	401232	Hs.720158	NM_207495		LINC01011	-	long intergenic non-protein coding RNA 1011	ncRNA
15.5333-3	chr14	56288364	56288542	+	0.133333	NA	exon (NM_021255, exon 4 of 6)	exon (NM_021255, exon 4 of 6)	170042	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding
22.8-14	chr5	6814584	6814885	+	0.133333	NA	intron (NR_146281, intron 1 of 1)	MER63A|DNA|hAT-Blackjack	13187	NR_036242	100422999		NR_036242	ENSG00000283420	MIR4278	-	microRNA 4278	ncRNA
20.3333-3	chr10	47241044	47241290	+	0.133333	NA	Intergenic	Intergenic	-59030	NM_004962	2662	Hs.2171	NM_004962	ENSG00000266524	GDF10	BIP|BMP-3b|BMP3B	growth differentiation factor 10	protein-coding
25.4-5	chr11	108896482	108896860	+	0.133333	NA	intron (NM_004398, intron 16 of 17)	intron (NM_004398, intron 16 of 17)	231602	NM_004398	1662	Hs.591931	NM_004398	ENSG00000178105	DDX10	Dbp4|HRH-J8	DEAD-box helicase 10	protein-coding
21.8-6	chr12	77925262	77925561	+	0.133333	NA	intron (NM_001024383, intron 1 of 39)	intron (NM_001024383, intron 1 of 39)	94517	NM_001024383	89795	Hs.655301	NM_014903	ENSG00000067798	NAV3	POMFIL1|STEERIN3|unc53H3	neuron navigator 3	protein-coding
21.5-9	chr6	64368780	64369067	+	0.133333	NA	intron (NM_001292009, intron 29 of 43)	L1PA15|LINE|L1	562087	NR_157848	112935969		NR_157848		SCAT8	EYS-AS1	S-phase cancer associated transcript 8	ncRNA
21.4-12	chr7	14960636	14960820	+	0.133333	NA	intron (NM_001350717, intron 1 of 24)	intron (NM_001350717, intron 1 of 24)	14130	NM_001350717	1607	Hs.567255	NM_004080	ENSG00000136267	DGKB	DAGK2|DGK|DGK-BETA	diacylglycerol kinase beta	protein-coding
18-13	chr4	141979167	141979427	+	0.133333	NA	Intergenic	PABL_A-int|LTR|ERV1	342714	NM_172175	3600	Hs.168132	NM_000585	ENSG00000164136	IL15	IL-15	interleukin 15	protein-coding
38.2666-5	chr6	25917982	25918323	+	0.133333	NA	intron (NM_001286123, intron 6 of 11)	intron (NM_001286123, intron 6 of 11)	7727	NM_001286125	10246	Hs.591802	NM_005835	ENSG00000112337	SLC17A2	NPT3	solute carrier family 17 member 2	protein-coding
31.0667-10	chr5	131301104	131301528	+	0.133333	NA	intron (NM_001038702, intron 1 of 4)	L1MA5A|LINE|L1	37307	NM_020240	56990	Hs.508829	NM_020240	ENSG00000158985	CDC42SE2	SPEC2	CDC42 small effector 2	protein-coding
44.7666	chr11	13410590	13411043	+	0.133333	NA	intron (NM_032320, intron 6 of 8)	intron (NM_032320, intron 6 of 8)	29463	NM_001297742	84280	Hs.332382	NM_032320	ENSG00000148925	BTBD10	GMRP-1|GMRP1	BTB domain containing 10	protein-coding
33.4666-6	chr5	60279833	60280262	+	0.133333	NA	intron (NM_001364599, intron 1 of 16)	AluJo|SINE|Alu	92616	NM_001364600	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
20.5666-2	chr2	42639298	42639572	+	0.133333	NA	intron (NM_001330443, intron 4 of 16)	L5|LINE|RTE-X	70803	NM_001330443	57504	Hs.435413	NM_020744	ENSG00000057935	MTA3	-	metastasis associated 1 family member 3	protein-coding
40.1999-3	chr18	3570527	3570870	+	0.133333	NA	intron (NM_001242762, intron 5 of 9)	AluJo|SINE|Alu	-23416	NR_024101	649446	Hs.19872	NM_001039796		DLGAP1-AS1	HsT914	DLGAP1 antisense RNA 1	ncRNA
51.9667	chr10	33841630	33842514	+	0.133333	NA	Intergenic	Intergenic	-69392	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA
15.4333-13	chr9	35313119	35313371	+	0.133333	NA	intron (NM_006377, intron 9 of 38)	intron (NM_006377, intron 9 of 38)	-28651	NM_001371188								
47.1333-4	chr22	46253032	46253584	+	0.133333	NA	Intergenic	Intergenic	-3015	NM_207327	150383	Hs.103110	NM_207327	ENSG00000205643	CDPF1	C22orf40	cysteine rich DPF motif domain containing 1	protein-coding
21.6-11	chr3	191290392	191290683	+	0.133333	NA	intron (NM_198152, intron 4 of 8)	intron (NM_198152, intron 4 of 8)	-38857	NM_178335	152137	Hs.478682	NM_174908	ENSG00000152492	CCDC50	C3orf6|DFNA44|YMER	coiled-coil domain containing 50	protein-coding
48.9999	chr4	48686206	48686616	+	0.133333	NA	intron (NM_015030, intron 2 of 63)	intron (NM_015030, intron 2 of 63)	93888	NM_015030	285527	Hs.595553	NM_015030	ENSG00000075539	FRYL	AF4p12|KIAA0826|MOR2	FRY like transcription coactivator	protein-coding
24.8-11	chr8	85022200	85022616	+	0.133333	NA	Intergenic	LTR60B|LTR|ERV1	-84830	NM_001349639	85444	Hs.193115	NM_033402	ENSG00000133739	LRRCC1	CLERC|CLERK|SAP2|VFL1	leucine rich repeat and coiled-coil centrosomal protein 1	protein-coding
19.6-13	chr4	42963748	42964055	+	0.133333	NA	intron (NM_001080476, intron 2 of 3)	MamSINE1|SINE|tRNA-RTE	70635	NM_001080476	389207	Hs.162559	NM_001080476	ENSG00000215203	GRXCR1	DFNB25|PPP1R88	glutaredoxin and cysteine rich domain containing 1	protein-coding
21.9667-13	chr8	135240923	135241196	+	0.133333	NA	intron (NR_120396, intron 1 of 4)	intron (NR_120396, intron 1 of 4)	6928	NR_026706	286094	Hs.440978	NR_026706	ENSG00000254083	LINC01591	-	long intergenic non-protein coding RNA 1591	ncRNA
22.2-13	chr4	81589123	81589525	+	0.133333	NA	Intergenic	Intergenic	-117417	NM_001300736	153020	Hs.591696	NM_152545	ENSG00000138670	RASGEF1B	GPIG4	RasGEF domain family member 1B	protein-coding
28.5999-2	chr7	37634770	37635028	+	0.133333	NA	Intergenic	L1MD1|LINE|L1	-48867	NM_001329994	353345	Hs.563492	NM_181791	ENSG00000187037	GPR141	PGR13	G protein-coupled receptor 141	protein-coding
61.0666	chr11	91549435	91550130	+	0.133333	NA	Intergenic	Intergenic	-675252	NM_001367949	120114	Hs.98523	NM_001008781	ENSG00000165323	FAT3	CDHF15|CDHR10|hFat3	FAT atypical cadherin 3	protein-coding
19.3333-4	chr15	58604420	58604708	+	0.133333	NA	intron (NM_001320570, intron 13 of 14)	intron (NM_001320570, intron 13 of 14)	89043	NR_073415	664618	Hs.670224	NR_002927		HSP90AB4P	HSP90Bd	heat shock protein 90 alpha family class B member 4, pseudogene	pseudo
17.2-4	chr2	117696568	117696747	+	0.133333	NA	Intergenic	MER30|DNA|hAT-Charlie	-118034	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
20.6666-8	chr7	27369375	27369612	+	0.133333	NA	Intergenic	L1M5|LINE|L1	-122264	NR_120507	101410536	Hs.687800	NR_120507	ENSG00000253405	EVX1-AS	EVX1-AS1	EVX1 antisense RNA	ncRNA
37.4-7	chr8	63841911	63842447	+	0.133333	NA	Intergenic	Intergenic	72749	NR_038875	286184	Hs.586402	NR_038875	ENSG00000253734	LINC01289	-	long intergenic non-protein coding RNA 1289	ncRNA
33.8999	chr12	53843846	53844397	+	0.133333	NA	Intergenic	Intergenic	-87087	NR_104332	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA
43.4-2	chr12	10653561	10654066	+	0.133333	NA	intron (NM_018423, intron 1 of 10)	intron (NM_018423, intron 1 of 10)	20239	NM_018423	55359	Hs.24979	NM_018423	ENSG00000060140	STYK1	NOK|SuRTK106	serine/threonine/tyrosine kinase 1	protein-coding
16.8666	chr2	103223044	103223197	+	0.133333	NA	Intergenic	Intergenic	-238691	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
35.2999	chr8	35730533	35730937	+	0.133333	NA	intron (NM_001322818, intron 10 of 16)	intron (NM_001322818, intron 10 of 16)	-20415	NR_125819	101929550	Hs.583803	NR_125819		LOC101929550	-	uncharacterized LOC101929550	ncRNA
13.1333-10	chr7	84380462	84380657	+	0.133333	NA	Intergenic	Intergenic	-151917	NR_110080	101927378	Hs.539042	NR_110079	ENSG00000235139	LOC101927378	-	uncharacterized LOC101927378	ncRNA
12.3333-6	chr14	69147459	69147584	+	0.133333	NA	intron (NM_003861, intron 1 of 8)	MIR|SINE|MIR	5078	NM_001284207	8816	Hs.509780	NM_003861	ENSG00000139990	DCAF5	BCRG2|BCRP2|D14S1461E|WDR22	DDB1 and CUL4 associated factor 5	protein-coding
34.5667-6	chr5	53255428	53255980	+	0.133333	NA	Intergenic	MER45A|DNA|hAT-Tip100	145862	NR_034107	257396	Hs.12326	NR_034107	ENSG00000247796	LOC257396	-	uncharacterized LOC257396	ncRNA
34.9999	chr12	102847241	102847747	+	0.133333	NA	intron (NM_000277, intron 8 of 12)	intron (NM_000277, intron 8 of 12)	-23095	NR_033855	283432	Hs.382110	NR_033855	ENSG00000258169	LINC00485	-	long intergenic non-protein coding RNA 485	ncRNA
60.1999	chr1	171327087	171327786	+	0.133333	NA	intron (NM_002022, intron 5 of 9)	MIR|SINE|MIR	-11460	NR_002719	7151	Hs.661092	NR_002719		TOP1P1	-	DNA topoisomerase I pseudogene 1	pseudo
35.2-4	chr18	12770958	12771474	+	0.133333	NA	Intergenic	Intergenic	-21794	NR_110763	100996324	Hs.333275	NR_110763		LINC01882	-	long intergenic non-protein coding RNA 1882	ncRNA
23.7-7	chr22	20220014	20220289	+	0.133333	NA	Intergenic	Intergenic	13819	NR_026919	150197	Hs.635544	NM_152508	ENSG00000236499	LINC00896	-	long intergenic non-protein coding RNA 896	ncRNA
20.5333-4	chr14	28617387	28617646	+	0.133333	NA	Intergenic	Intergenic	147803	NR_125758	103695363	Hs.569360	NR_125758		FOXG1-AS1	FOXG1-AS	FOXG1 antisense RNA 1	ncRNA
41.7999-3	chr12	11504908	11505609	+	0.133333	NA	Intergenic	Intergenic	-18580	NR_148969	440084	Hs.121321	NR_148969		LOC440084	-	uncharacterized LOC440084	ncRNA
6.93332	chr2	55918360	55918417	+	0.133333	NA	intron (NM_001039349, intron 2 of 10)	intron (NM_001039349, intron 2 of 10)	5394	NM_001039348	2202	Hs.76224	NM_004105	ENSG00000115380	EFEMP1	DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5	EGF containing fibulin extracellular matrix protein 1	protein-coding
33.7333	chr14	61853788	61854180	+	0.133333	NA	intron (NM_001367656, intron 1 of 7)	Tigger5b|DNA|TcMar-Tigger	41281	NM_001367654	83851	Hs.404139	NM_031914	ENSG00000139973	SYT16	CHR14SYT|SYT14L|Strep14|syt14r	synaptotagmin 16	protein-coding
19.3333-13	chr4	178330514	178330728	+	0.133333	NA	Intergenic	Intergenic	-422685	NR_108092	101928656	Hs.508131	NR_108092	ENSG00000251504	LINC01099	-	long intergenic non-protein coding RNA 1099	ncRNA
32.7	chr10	13980033	13980344	+	0.133333	NA	intron (NM_018027, intron 2 of 24)	intron (NM_018027, intron 2 of 24)	-8292	NM_001318337	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding
33.3999	chr3	126023939	126024204	+	0.133333	NA	intron (NM_001164475, intron 4 of 9)	intron (NM_001164475, intron 4 of 9)	32704	NM_001008487	54946	Hs.573007	NM_017836	ENSG00000114544	SLC41A3	SLC41A1-L2	solute carrier family 41 member 3	protein-coding
38.0666	chr10	44855085	44855533	+	0.133333	NA	intron (NR_033842, intron 2 of 7)	intron (NR_033842, intron 2 of 7)	-56007	NM_001345926	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding
39.5333	chr11	9638920	9639372	+	0.133333	NA	Intergenic	Intergenic	-24931	NM_001297714	23075	Hs.153026	NM_015055	ENSG00000133789	SWAP70	HSPC321|SWAP-70	switching B cell complex subunit SWAP70	protein-coding
11.7333-5	chr7	119091460	119091649	+	0.133333	NA	Intergenic	Intergenic	815821	NR_131962	105375475	Hs.566654	NR_131960	ENSG00000225546	LINC02476	LVCAT5	long intergenic non-protein coding RNA 2476	ncRNA
13.7666	chr18	11535035	11535138	+	0.133333	NA	Intergenic	Intergenic	45038	NR_110778	101927433	Hs.331210	NR_110778	ENSG00000267252	LINC01255	-	long intergenic non-protein coding RNA 1255	ncRNA
16.7-6	chr14	49175256	49175457	+	0.133333	NA	Intergenic	L1MA8|LINE|L1	411024	NM_001030001	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29|uS14	ribosomal protein S29	protein-coding
30.3999-2	chr10	21944263	21944628	+	0.133333	NA	intron (NM_022365, intron 1 of 11)	intron (NM_022365, intron 1 of 11)	59285	NM_022365	64215	Hs.499000	NM_022365	ENSG00000136770	DNAJC1	DNAJL1|ERdj1|HTJ1|MTJ1	DnaJ heat shock protein family (Hsp40) member C1	protein-coding
33.2333-3	chr11	28576660	28577046	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-99305	NR_107035	102466876		NR_107035	ENSG00000273912	MIR8068	hsa-mir-8068	microRNA 8068	ncRNA
36-5	chr18	4738719	4739139	+	0.133333	NA	Intergenic	Intergenic	-283622	NM_004746	9229	Hs.594640	NM_004746	ENSG00000170579	DLGAP1	DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1	DLG associated protein 1	protein-coding
51.7-2	chr22	39175592	39176417	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-23324	NM_175709	23492	Hs.356416	NM_175709	ENSG00000100307	CBX7	-	chromobox 7	protein-coding
30.3333-7	chr6	140064780	140065129	+	0.133333	NA	intron (NR_121623, intron 1 of 1)	AluSg|SINE|Alu	-73693	NR_121624	103352541	Hs.582647	NR_121624		LOC103352541	-	uncharacterized LOC103352541	ncRNA
28.2-17	chr8	139430388	139430669	+	0.133333	NA	Intergenic	Intergenic	272595	NM_001282534	51305	Hs.493037	NM_001282534	ENSG00000169427	KCNK9	K2p9.1|KT3.2|TASK-3|TASK3	potassium two pore domain channel subfamily K member 9	protein-coding
29.0333-4	chr4	85014820	85015079	+	0.133333	NA	Intergenic	LTR16B|LTR|ERVL	47465	NR_152782	404201	Hs.46730	NM_205857	ENSG00000180769	WDFY3-AS2	C4orf12|FBI4|NCRNA00247	WDFY3 antisense RNA 2	ncRNA
41.3-3	chr16	9402246	9402748	+	0.133333	NA	intron (NR_135195, intron 2 of 2)	intron (NR_135195, intron 2 of 2)	42488	NR_126397	104355218	Hs.564967	NR_126397	ENSG00000261397	LINC01177	-	long intergenic non-protein coding RNA 1177	ncRNA
30.8333	chr11	8669710	8670317	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-11177	NM_014818	9866	Hs.130836	NM_014818	ENSG00000166436	TRIM66	C11orf29|TIF1D|TIF1DELTA	tripartite motif containing 66	protein-coding
28.1333-10	chr4	185228956	185229224	+	0.133333	NA	intron (NM_001317781, intron 1 of 18)	intron (NM_001317781, intron 1 of 18)	24853	NM_001317781	83891	Hs.369091	NM_031953	ENSG00000109762	SNX25	MSTP043|SBBI31	sorting nexin 25	protein-coding
16.9-5	chr2	34066421	34066594	+	0.133333	NA	promoter-TSS (NR_132381)	promoter-TSS (NR_132381)	-719	NR_132381	106144585	Hs.580486	NR_132381	ENSG00000237790	LINC01318	-	long intergenic non-protein coding RNA 1318	ncRNA
13.3333-6	chr14	95006847	95006991	+	0.133333	NA	Intergenic	Intergenic	126584	NM_001195573	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2	dicer 1, ribonuclease III	protein-coding
10.8-3	chr2	39570109	39570321	+	0.133333	NA	intron (NR_037875, intron 5 of 5)	intron (NR_037875, intron 5 of 5)	-95283	NM_001167959	130733	Hs.40808	NM_152390	ENSG00000152154	TMEM178A	TMEM178	transmembrane protein 178A	protein-coding
43.2666	chr12	94571791	94572469	+	0.133333	NA	promoter-TSS (NR_106998)	promoter-TSS (NR_106998)	-778	NR_106998	102465834		NR_106998	ENSG00000283818	MIR7844	hsa-mir-7844	microRNA 7844	ncRNA
42.8332	chr2	20800315	20800843	+	0.133333	NA	intron (NR_104233, intron 1 of 4)	intron (NR_104233, intron 1 of 4)	22522	NM_001282720	60526	Hs.187823	NM_021925	ENSG00000118961	LDAH	C2orf43|hLDAH	lipid droplet associated hydrolase	protein-coding
20.4666-7	chr4	102845540	102845919	+	0.133333	NA	intron (NM_181890, intron 1 of 7)	ERVL-E-int|LTR|ERVL	16415	NR_131185	105377348	Hs.661187	NR_131185	ENSG00000246560	UBE2D3-AS1	-	UBE2D3 antisense RNA 1	ncRNA
27.0333-13	chr8	19858422	19858627	+	0.133333	NA	Intergenic	LTR27E|LTR|ERV1	41108	NM_018142	55174	Hs.512627	NM_018142	ENSG00000104613	INTS10	C8orf35|INT10	integrator complex subunit 10	protein-coding
41.7333-3	chr18	70181048	70181500	+	0.133333	NA	intron (NM_001318520, intron 10 of 47)	intron (NM_001318520, intron 10 of 47)	24413	NM_173630	25914	Hs.654809	NM_173630	ENSG00000176225	RTTN	MSSP	rotatin	protein-coding
20.6-3	chr10	21330768	21330934	+	0.133333	NA	Intergenic	Intergenic	42099	NR_155751	105376444	Hs.638243	NR_155751		LINC02643	-	long intergenic non-protein coding RNA 2643	ncRNA
33.6333-6	chr6	162832688	162832984	+	0.133333	NA	intron (NM_001080379, intron 2 of 4)	intron (NM_001080379, intron 2 of 4)	104866	NM_001080379	135138	Hs.25791	NM_152410	ENSG00000112530	PACRG	GLUP|HAK005771|PACRG2.1|PARK2CRG	parkin coregulated	protein-coding
15.1-13	chr7	46820902	46821015	+	0.133333	NA	Intergenic	L1HS|LINE|L1	-123836	NR_134575	730338	Hs.640207	NR_134575	ENSG00000233539	LOC730338	-	uncharacterized LOC730338	ncRNA
47.5333-2	chr16	83659685	83660090	+	0.133333	NA	intron (NM_001220489, intron 7 of 12)	AluSx1|SINE|Alu	144089	NR_120308	102724163		NR_120308	ENSG00000260228	LOC102724163	-	uncharacterized LOC102724163	ncRNA
25.3333-13	chr7	4175903	4176132	+	0.133333	NA	intron (NM_001079653, intron 8 of 19)	intron (NM_001079653, intron 8 of 19)	-41180	NR_158215	105375131		NR_158215		LOC105375131	-	uncharacterized LOC105375131	ncRNA
28.7666-7	chr6	38876122	38876468	+	0.133333	NA	intron (NM_001371, intron 52 of 91)	intron (NM_001371, intron 52 of 91)	76812	NR_038401	100131047	Hs.670957	NR_038401		LOC100131047	-	uncharacterized LOC100131047	ncRNA
39.1333	chr13	40424758	40425257	+	0.133333	NA	intron (NR_024506, intron 5 of 5)	(AAAT)n|Simple_repeat|Simple_repeat	55999	NR_024507	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	lncFOXO1	long intergenic non-protein coding RNA 598	ncRNA
53.4667	chr4	61990986	61991736	+	0.133333	NA	intron (NM_001371343, intron 18 of 23)	intron (NM_001371343, intron 18 of 23)	170404	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
23.0667-14	chr6	138068529	138068825	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	38742	NM_022121	64065	Hs.201446	NM_022121	ENSG00000112378	PERP	KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1	p53 apoptosis effector related to PMP22	protein-coding
43.9999	chr6	77878962	77879409	+	0.133333	NA	intron (NM_001282136, intron 4 of 4)	intron (NM_001282136, intron 4 of 4)	226146	NM_001322247	101928601	Hs.544538	NM_001282136	ENSG00000269964	MEI4	-	meiotic double-stranded break formation protein 4	protein-coding
21.6-9	chr20	48600834	48601078	+	0.133333	NA	Intergenic	MIR|SINE|MIR	227043	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1	protein-coding
15.7333-13	chr5	131881314	131881515	+	0.133333	NA	intron (NM_001303622, intron 8 of 12)	L2a|LINE|L2	64249	NM_001303622	728637	Hs.631802	NM_001278059	ENSG00000239642	MEIKIN	-	meiotic kinetochore factor	protein-coding
31-9	chr6	125413561	125413859	+	0.133333	NA	Intergenic	Intergenic	-111743	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding
24.0333-6	chr14	87742399	87742848	+	0.133333	NA	Intergenic	Intergenic	-87329	NR_146551	105370611	Hs.691123	NR_146551	ENSG00000258770	LINC02330	-	long intergenic non-protein coding RNA 2330	ncRNA
27.7333-10	chr6	48475133	48475378	+	0.133333	NA	Intergenic	L1MA3|LINE|L1	-406566	NM_207499	442213	Hs.659409	NM_207499	ENSG00000244694	PTCHD4	C6orf138|PTCH53|dJ402H5.2	patched domain containing 4	protein-coding
52.8666-3	chrX	69048656	69049555	+	0.133333	NA	Intergenic	MIR|SINE|MIR	116348	NM_145119	64219	Hs.522679	NM_022368	ENSG00000181191	PJA1	PRAJA1|RNF70	praja ring finger ubiquitin ligase 1	protein-coding
26.7666-2	chr2	176369592	176369818	+	0.133333	NA	Intergenic	Intergenic	100263	NM_001006635	10651	Hs.470728	NM_006554	ENSG00000128654	MTX2	-	metaxin 2	protein-coding
34.0666-2	chr10	53586635	53586960	+	0.133333	NA	Intergenic	Intergenic	-815097	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
28.6-11	chr2	32140371	32140668	+	0.133333	NA	intron (NM_001363875, intron 11 of 15)	AluSz6|SINE|Alu	-25322	NM_001193515	55676	Hs.23248	NM_017964	ENSG00000152683	SLC30A6	MST103|MSTP103|ZNT6	solute carrier family 30 member 6	protein-coding
63.1332	chr4	66572658	66573290	+	0.133333	NA	Intergenic	HAL1b|LINE|L1	296150	NR_031673	100302177		NR_031673	ENSG00000221563	MIR1269A	MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a	microRNA 1269a	ncRNA
42.8666-6	chr7	40110564	40111149	+	0.133333	NA	Intergenic	AluSg|SINE|Alu	23766	NM_138701	136647	Hs.654989	NM_138701	ENSG00000168303	MPLKIP	ABHS|C7orf11|ORF20|TTD4	M-phase specific PLK1 interacting protein	protein-coding
20.4333-6	chr4	38291562	38291832	+	0.133333	NA	Intergenic	AluY|SINE|Alu	-75217	NR_149123	105374410		NR_149123	ENSG00000248227	LINC02513	-	long intergenic non-protein coding RNA 2513	ncRNA
34.4666-5	chr9	101418287	101418657	+	0.133333	NA	Intergenic	MIR|SINE|MIR	17302	NM_000035	229	Hs.530274	NM_000035	ENSG00000136872	ALDOB	ALDB|ALDO2	aldolase, fructose-bisphosphate B	protein-coding
32.2666-5	chr3	189594845	189595204	+	0.133333	NA	Intergenic	Intergenic	-1722	NM_001329964	8626	Hs.137569	NM_003722	ENSG00000073282	TP63	AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L	tumor protein p63	protein-coding
18.7333-13	chr2	112780431	112780611	+	0.133333	NA	intron (NM_000575, intron 4 of 6)	intron (NM_000575, intron 4 of 6)	4877	NM_000575	3552	Hs.1722	NM_000575	ENSG00000115008	IL1A	IL-1A|IL1|IL1-ALPHA|IL1F1	interleukin 1 alpha	protein-coding
46.1-3	chr3	126358497	126358931	+	0.133333	NA	Intergenic	Intergenic	-1306	NM_014079	28999	Hs.272215	NM_014079	ENSG00000163884	KLF15	KKLF	Kruppel like factor 15	protein-coding
16.0333-9	chr22	22073919	22074070	+	0.133333	NA	Intergenic	Intergenic	-30060	NR_135291	649179	Hs.553939	NR_135291	ENSG00000197549	PRAMENP	PRAMEF24P|PRAMEL	PRAME N-terminal like, pseudogene	pseudo
33.9999	chr7	8258591	8258880	+	0.133333	NA	intron (NM_001350826, intron 1 of 14)	intron (NM_001350826, intron 1 of 14)	3317	NM_001350825	3382	Hs.487561	NM_004968	ENSG00000003147	ICA1	ICA69|ICAp69	islet cell autoantigen 1	protein-coding
29.8666-3	chr14	103707214	103707547	+	0.133333	NA	intron (NM_001371232, intron 5 of 9)	intron (NM_001371232, intron 5 of 9)	8071	NM_001371229								
32.4333	chr1	12573349	12573703	+	0.133333	NA	intron (NM_001324370, intron 4 of 5)	L2b|LINE|L2	5497	NR_106788	102466722		NR_106788	ENSG00000276830	MIR6730	hsa-mir-6730	microRNA 6730	ncRNA
24.0333-12	chr3	96865941	96866168	+	0.133333	NA	intron (NM_001080448, intron 1 of 17)	L2c|LINE|L2	51460	NM_001278301	285220	Hs.272208	NM_173655	ENSG00000080224	EPHA6	EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066	EPH receptor A6	protein-coding
24.5333-16	chr8	137519928	137520170	+	0.133333	NA	Intergenic	Intergenic	-106461	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
41.0666	chr12	46703681	46704136	+	0.133333	NA	Intergenic	Intergenic	122089	NM_001143824	55089	Hs.446077	NM_018018	ENSG00000139209	SLC38A4	ATA3|NAT3|PAAT|SNAT4	solute carrier family 38 member 4	protein-coding
23.4666	chr18	1984499	1984697	+	0.133333	NA	Intergenic	Intergenic	586907	NM_022840	64863	Hs.126888	NM_022840	ENSG00000101574	METTL4	HsT661	methyltransferase like 4	protein-coding
31.8666-8	chr7	53148047	53148346	+	0.133333	NA	Intergenic	MLT1H1|LTR|ERVL-MaLR	112563	NM_182595	285877	Hs.381970	NM_182595	ENSG00000221900	POM121L12	-	POM121 transmembrane nucleoporin like 12	protein-coding
52-7	chr4	83664995	83665665	+	0.133333	NA	Intergenic	Intergenic	129222	NM_032717	84803	Hs.99196	NM_032717	ENSG00000138678	GPAT3	AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1	glycerol-3-phosphate acyltransferase 3	protein-coding
31.2666-3	chr15	35119261	35119615	+	0.133333	NA	Intergenic	MER121|DNA|hAT?	-34030	NM_001355281	388112	Hs.635882	NM_001355281	ENSG00000255192	NANOGP8	NANOGP1|PN8	Nanog homeobox retrogene P8	protein-coding
48.2999-2	chr4	86944824	86945432	+	0.133333	NA	intron (NM_001166693, intron 1 of 20)	MIRb|SINE|MIR	10126	NM_001166693	4299	Hs.480190	NM_005935	ENSG00000172493	AFF1	AF4|MLLT2|PBM1	AF4/FMR2 family member 1	protein-coding
44.9333-5	chr9	1004718	1005429	+	0.133333	NA	Intergenic	Intergenic	28418	NM_021240	58524	Hs.189174	NM_021240	ENSG00000064218	DMRT3	DMRTA3	doublesex and mab-3 related transcription factor 3	protein-coding
30.0667-11	chr5	81968050	81968477	+	0.133333	NA	Intergenic	Intergenic	-3760	NM_001131028	83734	Hs.713698	NM_031482	ENSG00000152348	ATG10	APG10|APG10L|pp12616	autophagy related 10	protein-coding
38.3333-2	chr14	31536543	31537056	+	0.133333	NA	Intergenic	L2a|LINE|L2	-24605	NR_120408	80224	Hs.288981	NM_025152	ENSG00000151413	NUBPL	C14orf127|IND1|MC1DN21|huInd1	nucleotide binding protein like	protein-coding
19.4667	chr1	100579965	100580238	+	0.133333	NA	Intergenic	L1MC2|LINE|L1	41962	NM_022049	54112	Hs.170053	NM_022049	ENSG00000181656	GPR88	COCPMR|STRG	G protein-coupled receptor 88	protein-coding
26.7666	chr2	128705889	128706199	+	0.133333	NA	Intergenic	L1M4b|LINE|L1	-158556	NR_110278	101927881	Hs.570247	NR_110278		LOC101927881	-	uncharacterized LOC101927881	ncRNA
12.1666	chr9	78491095	78491186	+	0.133333	NA	Intergenic	Intergenic	194015	NM_058179	29968	Hs.494261	NM_021154	ENSG00000135069	PSAT1	EPIP|NLS2|PSA|PSAT|PSATD	phosphoserine aminotransferase 1	protein-coding
20.4666-3	chr18	52388938	52389188	+	0.133333	NA	intron (NM_005215, intron 1 of 28)	intron (NM_005215, intron 1 of 28)	48866	NM_005215	1630	Hs.162025	NM_005215	ENSG00000187323	DCC	CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1	DCC netrin 1 receptor	protein-coding
38.3999-2	chr15	77721305	77721623	+	0.133333	NA	promoter-TSS (NM_001301197)	promoter-TSS (NM_001301197)	-713	NM_001301197	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|MRT64|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
29.8-11	chr8	63068131	63068445	+	0.133333	NA	intron (NM_000370, intron 2 of 4)	L2|LINE|L2	17765	NM_000370	7274	Hs.69049	NM_000370	ENSG00000137561	TTPA	ATTP|AVED|TTP1|alphaTTP	alpha tocopherol transfer protein	protein-coding
23.8666	chr15	46266320	46266725	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	561327	NR_135680	105370802	Hs.447522	NR_135680	ENSG00000259200	LOC105370802	-	uncharacterized LOC105370802	ncRNA
25.4666-3	chr2	78821084	78821472	+	0.133333	NA	Intergenic	Intergenic	-204424	NM_001270040	130120	Hs.447084	NM_198448	ENSG00000143954	REG3G	LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429	regenerating family member 3 gamma	protein-coding
42.6333-2	chr8	130606990	130607620	+	0.133333	NA	Intergenic	Intergenic	-163631	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	protein-coding
28.6-6	chr15	73387286	73387601	+	0.133333	NA	Intergenic	MER4CL34|LTR|ERV1	-18485	NM_005477	10021	Hs.86941	NM_005477	ENSG00000138622	HCN4	SSS2	hyperpolarization activated cyclic nucleotide gated potassium channel 4	protein-coding
23.9-4	chr17	63560347	63560832	+	0.133333	NA	intron (NR_073585, intron 1 of 7)	L1ME4b|LINE|L1	10112	NM_005828	10238	Hs.410596	NM_005828	ENSG00000136485	DCAF7	AN11|HAN11|SWAN-1|WDR68	DDB1 and CUL4 associated factor 7	protein-coding
19.8333-16	chrX	88709864	88710057	+	0.133333	NA	Intergenic	Intergenic	-37265	NM_033048	53336	Hs.458292	NM_033048	ENSG00000147183	CPXCR1	CT77	CPX chromosome region candidate 1	protein-coding
23.1333	chr10	15501243	15501564	+	0.133333	NA	Intergenic	MER102a|DNA|hAT-Charlie	-130114	NM_001010924	221061	Hs.66762	NM_001010924	ENSG00000148468	FAM171A1	APCN|C10orf38	family with sequence similarity 171 member A1	protein-coding
14.2	chr12	66392183	66392346	+	0.133333	NA	intron (NM_001366722, intron 19 of 24)	intron (NM_001366722, intron 19 of 24)	89719	NM_033647	92797	Hs.505941	NM_033647	ENSG00000127311	HELB	DHB|hDHB	DNA helicase B	protein-coding
10.8333	chr11	104984183	104984339	+	0.133333	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	-15687	NM_033306	837	Hs.138378	NM_001225	ENSG00000196954	CASP4	ICE(rel)II|ICEREL-II|ICH-2|Mih1|Mih1/TX|TX	caspase 4	protein-coding
29.4333-6	chr2	99887297	99887804	+	0.133333	NA	intron (NM_001025108, intron 6 of 23)	intron (NM_001025108, intron 6 of 23)	218033	NM_001025108	3899	Hs.444414	NM_002285	ENSG00000144218	AFF3	LAF4|MLLT2-like	AF4/FMR2 family member 3	protein-coding
20.0666-3	chr4	84280680	84280910	+	0.133333	NA	intron (NR_125909, intron 4 of 8)	AluSx|SINE|Alu	18374	NR_125909	101928978	Hs.647977	NR_125909	ENSG00000250546	LOC101928978	-	uncharacterized LOC101928978	ncRNA
25.3333-3	chr14	47781641	47781858	+	0.133333	NA	intron (NR_039996, intron 2 of 2)	intron (NR_039996, intron 2 of 2)	13265	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
26.6-17	chr7	36529541	36529806	+	0.133333	NA	intron (NM_001177507, intron 18 of 19)	intron (NM_001177507, intron 18 of 19)	70447	NR_046764	100874264	Hs.690994	NR_046764	ENSG00000230539	AOAH-IT1	-	AOAH intronic transcript 1	ncRNA
29.2666-4	chr3	78823749	78824039	+	0.133333	NA	intron (NM_002941, intron 4 of 30)	(TG)n|Simple_repeat|Simple_repeat	195565	NM_001145845	6091	Hs.744218	NM_002941	ENSG00000169855	ROBO1	DUTT1|SAX3	roundabout guidance receptor 1	protein-coding
22.5333-9	chr15	60084152	60084488	+	0.133333	NA	Intergenic	Intergenic	80009	NM_012182	27023	Hs.734475	NM_012182	ENSG00000171956	FOXB1	FKH5|HFKH-5	forkhead box B1	protein-coding
55.8666-2	chr9	30507841	30508474	+	0.133333	NA	Intergenic	Intergenic	-99703	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
36.7333-5	chr3	160228913	160229322	+	0.133333	NA	TTS (NM_001168214)	TTS (NM_001168214)	3481	NM_001168214	401097	Hs.729755	NM_001168214	ENSG00000180044	C3orf80	-	chromosome 3 open reading frame 80	protein-coding
31.2666-2	chr14	76920513	76921047	+	0.133333	NA	Intergenic	G-rich|Low_complexity|Low_complexity	-38858	NR_133913	105370578	Hs.574184	NR_133913	ENSG00000258602	LINC01629	linc-KIAA1737-2	long intergenic non-protein coding RNA 1629	ncRNA
41.6-10	chr8	140426847	140427410	+	0.133333	NA	intron (NM_001160372, intron 4 of 22)	AluSx3|SINE|Alu	30616	NM_001160372	83696	Hs.654911	NM_031466	ENSG00000167632	TRAPPC9	IBP|IKBKBBP|MRT13|NIBP|T1|TRS120	trafficking protein particle complex 9	protein-coding
56.2	chr11	97876024	97876581	+	0.133333	NA	Intergenic	Intergenic	-1144647	NM_014361	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
35.1-5	chr9	99401335	99401943	+	0.133333	NA	Intergenic	LTR32|LTR|ERVL	-26382	NR_102271	100996569	Hs.745280	NR_102270	ENSG00000271086	NAMA	-	non-protein coding RNA, associated with MAP kinase pathway and growth arrest	ncRNA
21.8-14	chr7	10457027	10457401	+	0.133333	NA	intron (NR_147499, intron 2 of 2)	L1ME2|LINE|L1	-245462	NR_149037	100131472	Hs.170681	NR_149037		LOC100131472	-	uncharacterized LOC100131472	ncRNA
53.1	chr5	42218853	42219776	+	0.133333	NA	Intergenic	Intergenic	-43969	NR_104636	101926960	Hs.365692	NR_104635		LOC101926960	-	uncharacterized LOC101926960	ncRNA
25.4667-4	chr16	66460945	66461257	+	0.133333	NA	intron (NM_001178020, intron 2 of 4)	intron (NM_001178020, intron 2 of 4)	15301	NR_109960	101927726	Hs.739193	NR_109960	ENSG00000261656	BEAN1-AS1	CTD-2258A20.5	BEAN1 antisense RNA 1	ncRNA
29.7333-9	chr2	20072190	20072513	+	0.133333	NA	Intergenic	Intergenic	-20723	NM_014713	9741	Hs.467807	NM_014713	ENSG00000068697	LAPTM4A	HUMORF13|LAPTM4|MBNT|Mtrp	lysosomal protein transmembrane 4 alpha	protein-coding
50-2	chr7	27917109	27917844	+	0.133333	NA	intron (NM_175061, intron 2 of 4)	MER5A|DNA|hAT-Charlie	177381	NM_001362795	8887	Hs.34576	NM_006024	ENSG00000106052	TAX1BP1	CALCOCO3|T6BP|TXBP151	Tax1 binding protein 1	protein-coding
23.6-18	chr7	50097481	50097792	+	0.133333	NA	intron (NM_001161834, intron 1 of 8)	intron (NM_001161834, intron 1 of 8)	1550	NM_001161834	100130988	Hs.99248	NM_001161834	ENSG00000164500	SPATA48	C7orf72	spermatogenesis associated 48	protein-coding
32.3333-10	chr7	54469947	54470460	+	0.133333	NA	Intergenic	Intergenic	-72122	NM_001301009	222008	Hs.335933	NM_182546	ENSG00000170419	VSTM2A	VSTM2	V-set and transmembrane domain containing 2A	protein-coding
37-5	chr3	191892251	191892659	+	0.133333	NA	Intergenic	Intergenic	-346175	NR_046596	100873986	Hs.581652	NR_046596	ENSG00000231383	FGF12-AS1	-	FGF12 antisense RNA 1	ncRNA
11.0666	chr12	83637492	83637575	+	0.133333	NA	Intergenic	L1MA4A|LINE|L1	950378	NM_001320322	160335	Hs.577775	NM_152588	ENSG00000179104	TMTC2	IBDBP1	transmembrane O-mannosyltransferase targeting cadherins 2	protein-coding
22.5333-14	chr4	148158250	148158506	+	0.133333	NA	intron (NM_000901, intron 4 of 8)	MIRc|SINE|MIR	284036	NM_001166104	4306	Hs.163924	NM_000901	ENSG00000151623	NR3C2	MCR|MLR|MR|NR3C2VIT	nuclear receptor subfamily 3 group C member 2	protein-coding
20.0666-4	chr5	100777340	100777596	+	0.133333	NA	Intergenic	Intergenic	39097	NR_031686	100302288		NR_031686	ENSG00000221263	MIR548P	MIRN548P|hsa-mir-548p	microRNA 548p	ncRNA
11.8	chr12	54879889	54879982	+	0.133333	NA	Intergenic	Intergenic	25419	NM_058173	118430	Hs.348419	NM_058173	ENSG00000172551	MUCL1	SBEM	mucin like 1	protein-coding
35.1333-2	chr11	88386960	88387477	+	0.133333	NA	Intergenic	Intergenic	-49482	NM_001814	1075	Hs.128065	NM_001814	ENSG00000109861	CTSC	CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS	cathepsin C	protein-coding
14.6-13	chr6	162751301	162751515	+	0.133333	NA	intron (NM_001080379, intron 1 of 4)	intron (NM_001080379, intron 1 of 4)	23438	NM_001080379	135138	Hs.25791	NM_152410	ENSG00000112530	PACRG	GLUP|HAK005771|PACRG2.1|PARK2CRG	parkin coregulated	protein-coding
34.8333-2	chr12	39553592	39554033	+	0.133333	NA	3' UTR (NM_005164, exon 10 of 10)	3' UTR (NM_005164, exon 10 of 10)	65991	NM_005164	225	Hs.117852	NM_005164	ENSG00000173208	ABCD2	ABC39|ALDL1|ALDR|ALDRP|hALDR	ATP binding cassette subfamily D member 2	protein-coding
30.0667-7	chr19	58283200	58283586	+	0.133333	NA	intron (NR_144447, intron 1 of 6)	MSTC|LTR|ERVL-MaLR	4427	NR_144447	108903150	Hs.715293	NR_144447	ENSG00000267216	ZNF8-ERVK3-1	-	ZNF8-ERVK3-1 readthrough	ncRNA
48.3333-6	chr2	204536861	204537294	+	0.133333	NA	Intergenic	Intergenic	-8398	NM_152526	117583	Hs.657382	NM_057177	ENSG00000116117	PARD3B	ALS2CR19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding
43.0333-4	chr5	144510130	144510536	+	0.133333	NA	Intergenic	Intergenic	304942	NM_001370486	57528	Hs.7093	NM_020768	ENSG00000183775	KCTD16	-	potassium channel tetramerization domain containing 16	protein-coding
36.1333-3	chr17	67358670	67359041	+	0.133333	NA	intron (NM_002816, intron 1 of 10)	intron (NM_002816, intron 1 of 10)	7722	NM_174871	5718	Hs.4295	NM_002816	ENSG00000197170	PSMD12	Rpn5|STISS|p55	proteasome 26S subunit, non-ATPase 12	protein-coding
48.7332	chr16	80362402	80362860	+	0.133333	NA	intron (NR_120307, intron 2 of 5)	intron (NR_120307, intron 2 of 5)	-178103	NM_001305017	83657	Hs.98849	NM_130897	ENSG00000168589	DYNLRB2	DNCL2B|DNLC2B|ROBLD2	dynein light chain roadblock-type 2	protein-coding
18.3333-3	chr1	175891525	175891783	+	0.133333	NA	Intergenic	Intergenic	14311	NR_125964	101928751		NR_125964	ENSG00000224718	LINC01657	-	long intergenic non-protein coding RNA 1657	ncRNA
33.5333-6	chr9	68851890	68852271	+	0.133333	NA	intron (NM_003558, intron 4 of 15)	L1PA8|LINE|L1	72015	NM_138333	116224	Hs.655572	NM_138333	ENSG00000187866	FAM122A	C9orf42	family with sequence similarity 122A	protein-coding
24.3333-9	chr3	160216624	160216980	+	0.133333	NA	Intergenic	L4_B_Mam|LINE|RTE-X	-8834	NM_001168214	401097	Hs.729755	NM_001168214	ENSG00000180044	C3orf80	-	chromosome 3 open reading frame 80	protein-coding
26.9999	chr15	69563701	69563950	+	0.133333	NA	intron (NR_026979, intron 3 of 4)	intron (NR_026979, intron 3 of 4)	2105	NR_026979	145837	Hs.410126	NR_026979		DRAIC	-	downregulated RNA in cancer, inhibitor of cell invasion and migration	ncRNA
36.2667-3	chr2	156148192	156148677	+	0.133333	NA	intron (NR_110250, intron 1 of 3)	intron (NR_110250, intron 1 of 3)	106497	NR_110249	101929378	Hs.171192	NR_110249	ENSG00000226383	LINC01876	-	long intergenic non-protein coding RNA 1876	ncRNA
17.6666-2	chr14	96508736	96509064	+	0.133333	NA	intron (NM_001293628, intron 1 of 21)	MIRc|SINE|MIR	6035	NM_001293628	10914	Hs.253726	NM_032632	ENSG00000090060	PAPOLA	PAP|PAP-alpha	poly(A) polymerase alpha	protein-coding
20.8-2	chr10	19404372	19404868	+	0.133333	NA	intron (NM_001142308, intron 28 of 39)	intron (NM_001142308, intron 28 of 39)	323930	NR_120646	101928834	Hs.676482	NR_120646	ENSG00000233968	LOC101928834	-	uncharacterized LOC101928834	ncRNA
26.2-29	chrX	100401336	100401634	+	0.133333	NA	intron (NM_020766, intron 2 of 4)	AluSp|SINE|Alu	8788	NM_020766	57526	Hs.4993	NM_020766	ENSG00000165194	PCDH19	EFMR|EIEE9	protocadherin 19	protein-coding
25.5666-3	chr17	17824937	17825304	+	0.133333	NA	intron (NM_001005291, intron 1 of 19)	intron (NM_001005291, intron 1 of 19)	-1490	NM_001321096	6720	Hs.592123	NM_004176	ENSG00000072310	SREBF1	SREBP1|bHLHd1	sterol regulatory element binding transcription factor 1	protein-coding
42.1666	chr1	189689268	189689612	+	0.133333	NA	Intergenic	MLT1-int|LTR|ERVL-MaLR	786570	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
27-25	chrX	134793397	134793960	+	0.133333	NA	intron (NM_001170757, intron 2 of 9)	intron (NM_001170757, intron 2 of 9)	2677	NM_001331092	159090	Hs.404706	NM_145284	ENSG00000156504	FAM122B	SPACIA2	family with sequence similarity 122B	protein-coding
22.9333-3	chr10	47175772	47175956	+	0.133333	NA	Intergenic	Intergenic	-124333	NM_004962	2662	Hs.2171	NM_004962	ENSG00000266524	GDF10	BIP|BMP-3b|BMP3B	growth differentiation factor 10	protein-coding
40.8666-3	chr5	12643875	12644351	+	0.133333	NA	intron (NR_033383, intron 2 of 3)	L1PB|LINE|L1	-23746	NR_039659	100616234		NR_039659	ENSG00000283468	MIR4454	-	microRNA 4454	ncRNA
29.1333-2	chr12	43457623	43457971	+	0.133333	NA	intron (NM_025003, intron 11 of 38)	L2a|LINE|L2	94406	NM_025003	80070	Hs.287554	NM_025003	ENSG00000173157	ADAMTS20	ADAM-TS20|ADAMTS-20|GON-1	ADAM metallopeptidase with thrombospondin type 1 motif 20	protein-coding
28.2667-6	chr3	20951717	20952205	+	0.133333	NA	Intergenic	L1MEc|LINE|L1	-453765	NR_002311	391518	Hs.543226	NR_002311		VENTXP7	HPX42|VENTX1	VENT homeobox pseudogene 7	pseudo
20.1333-8	chr18	33103920	33104122	+	0.133333	NA	intron (NM_001308126, intron 20 of 23)	intron (NM_001308126, intron 20 of 23)	-330998	NM_020805	57565	Hs.446164	NM_020805	ENSG00000197705	KLHL14	-	kelch like family member 14	protein-coding
31.1999	chr12	32137749	32138222	+	0.133333	NA	intron (NR_148725, intron 1 of 9)	AluSx|SINE|Alu	31138	NR_148725	636	Hs.505202	NM_001714	ENSG00000151746	BICD1	BICD|bic-D 1	BICD cargo adaptor 1	protein-coding
27.2666-6	chr7	23364867	23365160	+	0.133333	NA	intron (NM_006547, intron 3 of 14)	AluSz|SINE|Alu	-31433	NR_145734	109616981		NR_145734	ENSG00000212264	SNORD65C	-	small nucleolar RNA, C/D box 65C	snoRNA
45	chr1	49497105	49497607	+	0.133333	NA	intron (NR_136623, intron 2 of 12)	L1MA8|LINE|L1	-25271	NR_046839	100874313	Hs.551277	NR_046839	ENSG00000225623	AGBL4-IT1	-	AGBL4 intronic transcript 1	ncRNA
29.0666	chr9	26507390	26507852	+	0.133333	NA	Intergenic	Intergenic	385181	NM_024828	79886	Hs.178357	NM_024828	ENSG00000120159	CAAP1	C9orf82|CAAP	caspase activity and apoptosis inhibitor 1	protein-coding
34.3333-9	chr5	11572945	11573359	+	0.133333	NA	intron (NM_001288717, intron 2 of 20)	MIRb|SINE|MIR	15765	NM_001288716	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
36.4666-5	chr9	94481023	94481558	+	0.133333	NA	Intergenic	Intergenic	-73755	NR_121569	101928099	Hs.674409	NR_121566		PCAT7	PCAN-R2	prostate cancer associated transcript 7	ncRNA
43.9333-7	chr6	156647699	156648139	+	0.133333	NA	Intergenic	Intergenic	-129936	NM_001346813	57492	Hs.291587	NM_017519	ENSG00000049618	ARID1B	6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R	AT-rich interaction domain 1B	protein-coding
18.2667-13	chr4	11734415	11734671	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	34925	NR_146995	105374484	Hs.581972	NR_146995	ENSG00000248300	LINC02360	-	long intergenic non-protein coding RNA 2360	ncRNA
26.0666-2	chr11	10164911	10165292	+	0.133333	NA	intron (NM_030962, intron 2 of 39)	intron (NM_030962, intron 2 of 39)	129106	NM_030962	81846	Hs.577252	NM_030962	ENSG00000133812	SBF2	CMT4B2|DENND7B|MTMR13	SET binding factor 2	protein-coding
44.5333-2	chr10	57204440	57204998	+	0.133333	NA	Intergenic	Intergenic	99840	NR_037490	100500834		NR_037490	ENSG00000264747	MIR3924	-	microRNA 3924	ncRNA
35.1999	chr4	14971940	14972427	+	0.133333	NA	intron (NR_038857, intron 7 of 7)	L1MDa|LINE|L1	29862	NR_038857	441009	Hs.535004	NR_038857	ENSG00000247624	CPEB2-DT	CPEB2-AS1	CPEB2 divergent transcript	ncRNA
18.4666-4	chr4	110276187	110276452	+	0.133333	NA	Intergenic	Intergenic	-77704	NM_024090	79071	Hs.412939	NM_024090	ENSG00000170522	ELOVL6	FACE|FAE|LCE	ELOVL fatty acid elongase 6	protein-coding
35.4333-2	chr1	115349216	115349787	+	0.133333	NA	intron (NR_157569, intron 1 of 1)	intron (NR_157569, intron 1 of 1)	-11265	NM_002506	4803	Hs.2561	NM_002506	ENSG00000134259	NGF	Beta-NGF|HSAN5|NGFB	nerve growth factor	protein-coding
32.7333-4	chr17	6006194	6006576	+	0.133333	NA	Intergenic	L1MC3|LINE|L1	-64229	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding
21.2667-6	chr6	169278097	169278389	+	0.133333	NA	Intergenic	MER57B2|LTR|ERV1	-24129	NM_003247	7058	Hs.371147	NM_003247	ENSG00000186340	THBS2	TSP2	thrombospondin 2	protein-coding
46.9-2	chr1	190761422	190762070	+	0.133333	NA	intron (NR_033922, intron 2 of 4)	intron (NR_033922, intron 2 of 4)	136856	NR_033922	440704		NR_033922	ENSG00000231175	LINC01720	-	long intergenic non-protein coding RNA 1720	ncRNA
40.5	chr1	64488605	64488996	+	0.133333	NA	intron (NM_020925, intron 1 of 26)	intron (NM_020925, intron 1 of 26)	-17114	NM_001293274	57685	Hs.443891	NM_020925	ENSG00000158966	CACHD1	-	cache domain containing 1	protein-coding
33.2666	chr4	29316498	29316772	+	0.133333	NA	Intergenic	L1MB8|LINE|L1	102343	NR_146996	105374561	Hs.582013	NR_146996	ENSG00000248338	LINC02472	-	long intergenic non-protein coding RNA 2472	ncRNA
38.0666-2	chr14	48344797	48345141	+	0.133333	NA	Intergenic	L1MC5|LINE|L1	-549955	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
47.4999	chr1	11767932	11768481	+	0.133333	NA	exon (NM_001010881, exon 5 of 21)	exon (NM_001010881, exon 5 of 21)	6013	NM_001010881	284498	Hs.585415	NM_001010881		C1orf167	-	chromosome 1 open reading frame 167	protein-coding
33.5666-5	chr9	9422568	9422862	+	0.133333	NA	intron (NM_002839, intron 8 of 45)	L1MEg|LINE|L1	-376677	NR_135135	105375972	Hs.738242	NR_135135	ENSG00000230920	LOC105375972	-	uncharacterized LOC105375972	ncRNA
15.8-2	chr1	208099994	208100145	+	0.133333	NA	intron (NM_025179, intron 5 of 31)	MIR|SINE|MIR	144315	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding
36.3333-6	chr6	126107851	126108244	+	0.133333	NA	Intergenic	Intergenic	121507	NM_001031712	60487	Hs.404186	NM_021820	ENSG00000066651	TRMT11	C6orf75|MDS024|TRM11|TRMT11-1	tRNA methyltransferase 11 homolog	protein-coding
29.3666	chr16	89137923	89138576	+	0.133333	NA	intron (NR_045667, intron 1 of 4)	intron (NR_045667, intron 1 of 4)	1701	NR_045667	197322	Hs.461727	NM_174917	ENSG00000176715	ACSF3	-	acyl-CoA synthetase family member 3	protein-coding
23.2-4	chr12	25703820	25704115	+	0.133333	NA	Intergenic	L2|LINE|L2	-55389	NM_001352232	160492	Hs.44647	NM_152590	ENSG00000152936	LMNTD1	IFLTD1|LMNARS1|PAS1C1	lamin tail domain containing 1	protein-coding
25.7999	chr11	63749849	63750154	+	0.133333	NA	exon (NM_001265590, exon 3 of 8)	exon (NM_001265590, exon 3 of 8)	18774	NM_001144936	65998	Hs.191073	NM_001144936	ENSG00000188070	C11orf95	-	chromosome 11 open reading frame 95	protein-coding
30.7333-11	chr5	128353332	128353693	+	0.133333	NA	intron (NM_001999, intron 20 of 64)	intron (NM_001999, intron 20 of 64)	184733	NM_001999	2201	Hs.519294	NM_001999	ENSG00000138829	FBN2	CCA|DA9|EOMD	fibrillin 2	protein-coding
9.63332	chr10	14215277	14215360	+	0.133333	NA	intron (NR_134578, intron 2 of 3)	intron (NR_134578, intron 2 of 3)	115566	NR_134578	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding
58.1666	chr13	69150218	69151093	+	0.133333	NA	Intergenic	Intergenic	-71691	NR_125752	103689913	Hs.585628	NR_125752	ENSG00000235221	LINC00383	LINC00401	long intergenic non-protein coding RNA 383	ncRNA
23.1-8	chr2	130560018	130560268	+	0.133333	NA	Intergenic	AluJr4|SINE|Alu	-10228	NR_033930	646743	Hs.634887	NR_033930		PRSS40B	-	serine protease 40B	pseudo
36.2-7	chr3	106614179	106614600	+	0.133333	NA	Intergenic	AluSz|SINE|Alu	626249	NR_028303	100302640	Hs.648607	NR_028303	ENSG00000242759	LINC00882	-	long intergenic non-protein coding RNA 882	ncRNA
35.9333-5	chr3	52422939	52423508	+	0.133333	NA	exon (NM_001278221, exon 10 of 10)	exon (NM_001278221, exon 10 of 10)	12563	NM_016483	51533	Hs.372719	NM_016483	ENSG00000010318	PHF7	HSPC045|HSPC226|NYD-SP6	PHD finger protein 7	protein-coding
19.6-10	chr20	50854510	50854722	+	0.133333	NA	intron (NM_198799, intron 4 of 4)	MIR|SINE|MIR	55175	NM_001282532	23394	Hs.293736	NM_015339	ENSG00000101126	ADNP	ADNP1|HVDAS|MRD28	activity dependent neuroprotector homeobox	protein-coding
26-3	chr10	54959093	54959443	+	0.133333	NA	intron (NM_001354404, intron 3 of 34)	intron (NM_001354404, intron 3 of 34)	-157977	NM_001142767	65217	Hs.280209	NM_033056	ENSG00000150275	PCDH15	CDHR15|DFNB23|USH1F	protocadherin related 15	protein-coding
24.2333-4	chr15	82789854	82790431	+	0.133333	NA	intron (NM_001007122, intron 1 of 12)	AluSx3|SINE|Alu	15927	NM_001281806	123722	Hs.719372	NM_001007122	ENSG00000186628	FSD2	SPRYD1	fibronectin type III and SPRY domain containing 2	protein-coding
26.3-9	chr6	138984461	138984860	+	0.133333	NA	intron (NM_031922, intron 1 of 19)	intron (NM_031922, intron 1 of 19)	3601	NM_001286611	85021	Hs.334603	NM_031922	ENSG00000135597	REPS1	NBIA7|RALBP1	RALBP1 associated Eps domain containing 1	protein-coding
39.6-4	chr17	57222017	57222612	+	0.133333	NA	Intergenic	L1MEc|LINE|L1	-33537	NM_001322250	124540	Hs.658922	NM_138962	ENSG00000153944	MSI2	MSI2H	musashi RNA binding protein 2	protein-coding
24.2333-10	chr5	148352056	148352395	+	0.133333	NA	intron (NR_105057, intron 2 of 4)	L3|LINE|CR1	16666	NM_001040433	643394	Hs.631798	NM_001040433	ENSG00000204909	SPINK9	LEKTI2	serine peptidase inhibitor, Kazal type 9	protein-coding
21.1333-12	chr20	22002552	22002828	+	0.133333	NA	Intergenic	MSTB2|LTR|ERVL-MaLR	-51400	NR_038394	100270679	Hs.385748	NR_038394	ENSG00000234435	LINC01432	-	long intergenic non-protein coding RNA 1432	ncRNA
42.5333-5	chr22	20394166	20394604	+	0.133333	NA	non-coding (NR_046282, exon 1 of 6)	non-coding (NR_046282, exon 1 of 6)	234	NR_046282	7625	Hs.517418	NM_003426	ENSG00000185252	ZNF74	COS52|ZFP520|ZNF520|hZNF7	zinc finger protein 74	protein-coding
31.4333-3	chr20	53834388	53834642	+	0.133333	NA	Intergenic	Intergenic	41194	NR_002189	391257	Hs.449977	NR_002189		SUMO1P1	PIC1L|UBL2|UBL6	SUMO1 pseudogene 1	pseudo
47.6666	chr1	45936391	45936826	+	0.133333	NA	intron (NM_001324321, intron 3 of 28)	intron (NM_001324321, intron 3 of 28)	72260	NM_001324321	23139	Hs.319481	NM_015112	ENSG00000086015	MAST2	MAST205|MTSSK	microtubule associated serine/threonine kinase 2	protein-coding
25.7333-13	chr7	50105077	50105347	+	0.133333	NA	intron (NM_001161834, intron 2 of 8)	L1MB7|LINE|L1	9126	NM_001161834	100130988	Hs.99248	NM_001161834	ENSG00000164500	SPATA48	C7orf72	spermatogenesis associated 48	protein-coding
25.8666-4	chr15	63154720	63155009	+	0.133333	NA	intron (NM_015920, intron 3 of 3)	intron (NM_015920, intron 3 of 3)	2613	NM_015920	51065	Hs.108957	NM_015920	ENSG00000185088	RPS27L	-	ribosomal protein S27 like	protein-coding
30.7333-14	chrX	67650250	67650688	+	0.133333	NA	intron (NM_001011645, intron 3 of 8)	intron (NM_001011645, intron 3 of 8)	105846	NM_001348061	367	Hs.76704	NM_000044	ENSG00000169083	AR	AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM	androgen receptor	protein-coding
16.2666-2	chr7	53387078	53387206	+	0.133333	NA	Intergenic	Intergenic	351509	NM_182595	285877	Hs.381970	NM_182595	ENSG00000221900	POM121L12	-	POM121 transmembrane nucleoporin like 12	protein-coding
27.0666-2	chr3	87178280	87178514	+	0.133333	NA	Intergenic	AluJo|SINE|Alu	47880	NR_039958	100616161		NR_039958	ENSG00000264119	MIR4795	-	microRNA 4795	ncRNA
38.7333-5	chr19	36902437	36902875	+	0.133333	NA	intron (NM_001037232, intron 5 of 5)	(AAAAT)n|Simple_repeat|Simple_repeat	13383	NM_001171979	374899	Hs.720312	NM_001037232	ENSG00000185869	ZNF829	-	zinc finger protein 829	protein-coding
28.0333-2	chr11	20733307	20733559	+	0.133333	NA	intron (NM_201551, intron 2 of 18)	intron (NM_201551, intron 2 of 18)	63847	NM_006157	4745	Hs.657172	NM_006157	ENSG00000165973	NELL1	IDH3GL|NRP1	neural EGFL like 1	protein-coding
22.7333-3	chr19	34799900	34800197	+	0.133333	NA	Intergenic	L1MC3|LINE|L1	-26833	NM_001007248	148103	Hs.590961	NM_001007247	ENSG00000153896	ZNF599	-	zinc finger protein 599	protein-coding
38.0999	chr14	80184858	80185370	+	0.133333	NA	Intergenic	Intergenic	-26305	NR_038355	100628307	Hs.623865	NR_038355	ENSG00000258766	DIO2-AS1	-	DIO2 antisense RNA 1	ncRNA
16.5333	chr1	67583345	67583585	+	0.133333	NA	Intergenic	Intergenic	-101736	NM_001199742	1647	Hs.80409	NM_001924	ENSG00000116717	GADD45A	DDIT1|GADD45	growth arrest and DNA damage inducible alpha	protein-coding
28.3-3	chr20	3642799	3643269	+	0.133333	NA	intron (NM_139321, intron 27 of 28)	FRAM|SINE|Alu	20365	NM_145762	64096	Hs.302025	NM_022139	ENSG00000125861	GFRA4	-	GDNF family receptor alpha 4	protein-coding
19.4333-3	chr18	72815519	72815852	+	0.133333	NA	intron (NM_001354018, intron 4 of 11)	L1MEd|LINE|L1	37697	NR_049858	100847083		NR_049858	ENSG00000263750	MIR548AV	-	microRNA 548av	ncRNA
43.6999	chr5	30584961	30585288	+	0.133333	NA	Intergenic	Intergenic	-608562	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
28.6333-9	chr4	100225785	100226256	+	0.133333	NA	Intergenic	Intergenic	-35552	NM_145244	115265	Hs.480378	NM_145244	ENSG00000145358	DDIT4L	REDD2|Rtp801L	DNA damage inducible transcript 4 like	protein-coding
52.4666-2	chr5	78900053	78900546	+	0.133333	NA	intron (NM_198709, intron 5 of 7)	L1M3f|LINE|L1	85011	NM_000046	411	Hs.149103	NM_000046	ENSG00000113273	ARSB	ASB|G4S|MPS6	arylsulfatase B	protein-coding
17.8-6	chr12	9123157	9123348	+	0.133333	NA	Intergenic	MER44B|DNA|TcMar-Tigger	-7023	NM_001347423	2	Hs.88556	NM_000014	ENSG00000175899	A2M	A2MD|CPAMD5|FWP007|S863-7	alpha-2-macroglobulin	protein-coding
14.6666	chr8	138860140	138860276	+	0.133333	NA	intron (NM_152888, intron 3 of 64)	intron (NM_152888, intron 3 of 64)	53833	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
34.4-2	chr3	70480111	70480430	+	0.133333	NA	Intergenic	Intergenic	-167632	NM_001364676	107986096		NM_001364676	ENSG00000242120	MDFIC2	-	MyoD family inhibitor domain containing 2	protein-coding
12.6667-8	chr8	38358420	38358588	+	0.133333	NA	intron (NM_023034, intron 1 of 23)	intron (NM_023034, intron 1 of 23)	23767	NM_023034	54904	Hs.434966	NM_017778	ENSG00000147548	NSD3	KMT3F|KMT3G|WHISTLE|WHSC1L1|pp14328	nuclear receptor binding SET domain protein 3	protein-coding
36.8333-6	chr4	125020646	125021002	+	0.133333	NA	Intergenic	Intergenic	-295588	NM_024582	79633	Hs.563205	NM_024582	ENSG00000196159	FAT4	CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2	FAT atypical cadherin 4	protein-coding
21.7333-5	chr13	87598260	87598573	+	0.133333	NA	intron (NR_033829, intron 1 of 5)	L1MA8|LINE|L1	20324	NR_039722	100616182		NR_039722	ENSG00000266052	MIR4500	-	microRNA 4500	ncRNA
19.7333-3	chr18	68530509	68530770	+	0.133333	NA	Intergenic	Intergenic	184469	NM_001350516	54495	Hs.440534	NM_019022	ENSG00000166479	TMX3	PDIA13|TXNDC10	thioredoxin related transmembrane protein 3	protein-coding
41.8666-7	chr5	62627381	62627834	+	0.133333	NA	non-coding (NR_073584, exon 4 of 4)	non-coding (NR_073584, exon 4 of 4)	48788	NM_181506	100130733	Hs.721348	NM_181506	ENSG00000186105	LRRC70	SLRN	leucine rich repeat containing 70	protein-coding
15.1333-8	chr19	38181528	38181652	+	0.133333	NA	intron (NM_015073, intron 15 of 21)	AluSx|SINE|Alu	18494	NR_145800	109623473		NR_145800		SNORD152	-	small nucleolar RNA, C/D box 152	snoRNA
33.8-6	chr8	120880315	120880702	+	0.133333	NA	Intergenic	L2c|LINE|L2	-68462	NM_021021	6641	Hs.46701	NM_021021	ENSG00000172164	SNTB1	59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43	syntrophin beta 1	protein-coding
40.5333-3	chr11	85553029	85553488	+	0.133333	NA	intron (NM_001142699, intron 3 of 27)	L2a|LINE|L2	74012	NM_001142699	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
27.4667-2	chr1	201398747	201399135	+	0.133333	NA	intron (NM_005558, intron 1 of 9)	intron (NM_005558, intron 1 of 9)	383	NM_005558	3898	Hs.519035	NM_005558	ENSG00000159166	LAD1	LadA	ladinin 1	protein-coding
46.6999	chr18	75302840	75303317	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	91549	NM_001308210	10194	Hs.284217	NM_005786	ENSG00000179981	TSHZ1	CAA|NY-CO-33|SDCCAG33|TSH1	teashirt zinc finger homeobox 1	protein-coding
40.9666	chr2	33246563	33247013	+	0.133333	NA	intron (NM_206943, intron 10 of 33)	intron (NM_206943, intron 10 of 33)	112191	NM_001166266	4052	Hs.619315	NM_000627	ENSG00000049323	LTBP1	-	latent transforming growth factor beta binding protein 1	protein-coding
28.8-2	chr1	113229289	113229705	+	0.133333	NA	Intergenic	Intergenic	-23244	NR_038846	643441	Hs.124895	NR_038846		LOC643441	-	uncharacterized LOC643441	ncRNA
26.7333-11	chr6	48550420	48550890	+	0.133333	NA	Intergenic	Intergenic	-481966	NM_207499	442213	Hs.659409	NM_207499	ENSG00000244694	PTCHD4	C6orf138|PTCH53|dJ402H5.2	patched domain containing 4	protein-coding
19.4667-4	chr2	121816084	121816321	+	0.133333	NA	Intergenic	MIR|SINE|MIR	60551	NM_004622	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding
41.3999	chr20	13236994	13237321	+	0.133333	NA	TTS (NR_040043)	TTS (NR_040043)	2530	NR_040043	100505536	Hs.665253	NR_040043		ISM1-AS1	-	ISM1 antisense RNA 1	ncRNA
41.2-4	chr17	62928866	62929328	+	0.133333	NA	Intergenic	Intergenic	-15118	NR_030363	693218		NR_030363	ENSG00000207552	MIR633	MIRN633|hsa-mir-633	microRNA 633	ncRNA
18.8-11	chr4	180284919	180285173	+	0.133333	NA	Intergenic	Intergenic	874103	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
32.8666-3	chr12	40548225	40548471	+	0.133333	NA	intron (NM_173600, intron 152 of 173)	intron (NM_173600, intron 152 of 173)	-144091	NM_001843	1272	Hs.143434	NM_001843	ENSG00000018236	CNTN1	F3|GP135|MYPCN	contactin 1	protein-coding
21.1333-10	chr2	27185189	27185452	+	0.133333	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	-26711	NM_080592	51374	Hs.9527	NM_016085	ENSG00000138085	ATRAID	APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18	all-trans retinoic acid induced differentiation factor	protein-coding
50.3-2	chr2	30847083	30847785	+	0.133333	NA	Intergenic	L1MA3|LINE|L1	-39988	NM_144575	92291	Hs.660911	NM_144575	ENSG00000162949	CAPN13	-	calpain 13	protein-coding
33.4333-11	chr8	99402056	99402374	+	0.133333	NA	intron (NM_017890, intron 21 of 61)	MER70A|LTR|ERVL	134515	NR_030329	693184		NR_030329	ENSG00000207804	MIR599	MIRN599|hsa-mir-599	microRNA 599	ncRNA
51.3999	chr3	71795080	71795637	+	0.133333	NA	Intergenic	Intergenic	-10210	NM_021935	60675	Hs.528665	NM_021935	ENSG00000163421	PROK2	BV8|HH4|KAL4|MIT1|PK2	prokineticin 2	protein-coding
8.09999	chr16	77824034	77824135	+	0.133333	NA	intron (NM_020927, intron 2 of 8)	intron (NM_020927, intron 2 of 8)	35520	NM_020927	57687	Hs.461405	NM_020927	ENSG00000171724	VAT1L	-	vesicle amine transport 1 like	protein-coding
44.3333-2	chr2	130942947	130943523	+	0.133333	NA	intron (NM_001367493, intron 3 of 13)	L1MEf|LINE|L1	106321	NM_015320	50649	Hs.469935	NM_015320	ENSG00000136002	ARHGEF4	ASEF|ASEF1|GEF4|SMIM39|STM6	Rho guanine nucleotide exchange factor 4	protein-coding
34.0667-6	chr3	122376381	122376883	+	0.133333	NA	intron (NM_001017928, intron 1 of 4)	AluSq2|SINE|Alu	6599	NM_001017928	131076	Hs.220594	NM_001017928	ENSG00000160124	CCDC58	-	coiled-coil domain containing 58	protein-coding
22.7999	chr2	167783427	167783644	+	0.133333	NA	Intergenic	Intergenic	-35137	NM_020981	8708	Hs.735833	NM_020981	ENSG00000172318	B3GALT1	beta3Gal-T1	beta-1,3-galactosyltransferase 1	protein-coding
22.2667-2	chr12	61903760	61904010	+	0.133333	NA	intron (NM_178539, intron 1 of 4)	intron (NM_178539, intron 1 of 4)	288954	NM_178539	338811	Hs.269745	NM_178539	ENSG00000198673	TAFA2	FAM19A2|TAFA-2	TAFA chemokine like family member 2	protein-coding
30-15	chr8	133743355	133743673	+	0.133333	NA	Intergenic	Intergenic	33838	NR_125422	101927798	Hs.615036	NR_125422	ENSG00000253165	LOC101927798	-	uncharacterized LOC101927798	ncRNA
24.0333-16	chr9	88443097	88443385	+	0.133333	NA	intron (NM_006717, intron 2 of 5)	L1MC1|LINE|L1	54797	NM_006717	10927	Hs.146804	NM_006717	ENSG00000106723	SPIN1	SPIN|TDRD24	spindlin 1	protein-coding
61.2999	chr5	158672033	158672796	+	0.133333	NA	Intergenic	Intergenic	-262641	NR_109888	101927697	Hs.483960	NR_109888	ENSG00000276778	LINC02227	-	long intergenic non-protein coding RNA 2227	ncRNA
33.3333-5	chr2	168123789	168124044	+	0.133333	NA	intron (NM_013233, intron 10 of 17)	intron (NM_013233, intron 10 of 17)	123679	NM_013233	27347	Hs.276271	NM_013233	ENSG00000198648	STK39	DCHT|PASK|SPAK	serine/threonine kinase 39	protein-coding
42.4-10	chr8	121461564	121462034	+	0.133333	NA	Intergenic	L1MA9|LINE|L1	-177547	NR_002835	594842	Hs.668686	NR_002835		HAS2-AS1	HAS2-AS|HAS2AS|HASNT|NCRNA00077	HAS2 antisense RNA 1	ncRNA
51.0667-3	chr5	73277113	73277796	+	0.133333	NA	Intergenic	Intergenic	-60452	NR_146627	105379033	Hs.145178	NR_146627		LINC02230	-	long intergenic non-protein coding RNA 2230	ncRNA
25.8	chr10	85024290	85024572	+	0.133333	NA	Intergenic	LTR38A1|LTR|ERV1	174474	NR_120668	101929624	Hs.588831	NR_120667	ENSG00000237267	LINC01519	-	long intergenic non-protein coding RNA 1519	ncRNA
19.9666-2	chr2	193922009	193922361	+	0.133333	NA	Intergenic	Intergenic	-422084	NR_110222	101927406	Hs.385793	NR_110222	ENSG00000225539	LINC01821	-	long intergenic non-protein coding RNA 1821	ncRNA
35-12	chr7	39681418	39681857	+	0.133333	NA	intron (NM_005402, intron 1 of 4)	intron (NM_005402, intron 1 of 4)	-51931	NR_026999	349114	Hs.414183	NM_198284		LINC00265	NCRNA00265	long intergenic non-protein coding RNA 265	ncRNA
49.8332	chr16	84088286	84088937	+	0.133333	NA	intron (NM_003791, intron 8 of 22)	intron (NM_003791, intron 8 of 22)	28331	NM_003791	8720	Hs.75890	NM_003791	ENSG00000140943	MBTPS1	PCSK8|S1P|SEDKF|SKI-1	membrane bound transcription factor peptidase, site 1	protein-coding
41.6-7	chr2	72222015	72222480	+	0.133333	NA	intron (NR_135773, intron 19 of 21)	intron (NR_135773, intron 19 of 21)	-74385	NM_019885	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
28.6333-11	chr5	82520613	82521108	+	0.133333	NA	Intergenic	Intergenic	241398	NM_001017971	92270	Hs.676227	NM_001017971	ENSG00000205464	ATP6AP1L	-	ATPase H+ transporting accessory protein 1 like	protein-coding
23.1666-2	chr2	108992096	108992430	+	0.133333	NA	Intergenic	L2a|LINE|L2	-3043	NM_022336	10913	Hs.171971	NM_022336	ENSG00000135960	EDAR	DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1	ectodysplasin A receptor	protein-coding
55.5333-2	chr2	123834745	123835323	+	0.133333	NA	Intergenic	L2a|LINE|L2	190140	NR_147976	107985820	Hs.637705	NR_147976		LOC107985820	-	uncharacterized LOC107985820	ncRNA
19.6333-2	chr10	130381704	130382061	+	0.133333	NA	Intergenic	Intergenic	245473	NM_001321980	10539	Hs.42644	NM_006541	ENSG00000108010	GLRX3	GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3	glutaredoxin 3	protein-coding
9.89998	chr5	83814417	83814491	+	0.133333	NA	Intergenic	L1MA4|LINE|L1	-93599	NM_001884	1404	Hs.2799	NM_001884	ENSG00000145681	HAPLN1	CRT1|CRTL1	hyaluronan and proteoglycan link protein 1	protein-coding
15.1-17	chr9	134155550	134155781	+	0.133333	NA	intron (NM_052821, intron 10 of 12)	intron (NM_052821, intron 10 of 12)	8899	NR_023344	100151684	Hs.545589	NR_023344	ENSG00000221676	RNU6ATAC	RNU6ATAC1|U6ATAC	RNA, U6atac small nuclear (U12-dependent splicing)	snRNA
38.5999-2	chr12	123785024	123785387	+	0.133333	NA	intron (NM_207437, intron 8 of 77)	L1MB4|LINE|L1	22710	NM_207437	196385	Hs.622654	NM_207437	ENSG00000197653	DNAH10	-	dynein axonemal heavy chain 10	protein-coding
41.0332-2	chr9	5820677	5820984	+	0.133333	NA	intron (NM_024896, intron 4 of 14)	intron (NM_024896, intron 4 of 14)	12287	NM_024896	79956	Hs.591078	NM_024896	ENSG00000099219	ERMP1	FXNA|KIAA1815|bA207C16.3	endoplasmic reticulum metallopeptidase 1	protein-coding
31.0333-6	chr5	164607334	164607690	+	0.133333	NA	Intergenic	AluSc|SINE|Alu	137233	NR_105065	102546299	Hs.437730	NR_105065	ENSG00000241956	LOC102546299	-	uncharacterized LOC102546299	ncRNA
26.9666-5	chr8	119659962	119660228	+	0.133333	NA	intron (NM_001330600, intron 1 of 25)	intron (NM_001330600, intron 1 of 25)	13295	NM_001330600	5168	Hs.190977	NM_006209	ENSG00000136960	ENPP2	ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2	ectonucleotide pyrophosphatase/phosphodiesterase 2	protein-coding
28.7333-14	chr8	41631165	41631431	+	0.133333	NA	Intergenic	Intergenic	16061	NM_152568	157848		NM_152568	ENSG00000165066	NKX6-3	NKX6.3	NK6 homeobox 3	protein-coding
18-17	chr6	62021582	62021858	+	0.133333	NA	intron (NR_146874, intron 3 of 13)	intron (NR_146874, intron 3 of 13)	264505	NR_146873	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
30.9333-2	chr1	96079829	96080297	+	0.133333	NA	Intergenic	L1PA8|LINE|L1	87995	NR_125991	102723661	Hs.143911	NR_125991	ENSG00000237435	LINC02790	-	long intergenic non-protein coding RNA 2790	ncRNA
22.3333	chr10	71795112	71795454	+	0.133333	NA	promoter-TSS (NM_001171933)	promoter-TSS (NM_001171933)	-488	NM_001171933	64072	Hs.656032	NM_022124	ENSG00000107736	CDH23	CDHR23|PITA5|USH1D	cadherin related 23	protein-coding
32.1333-9	chr7	85167166	85167449	+	0.133333	NA	Intergenic	Intergenic	-45376	NM_152754	223117	Hs.201340	NM_152754	ENSG00000153993	SEMA3D	Sema-Z2|coll-2	semaphorin 3D	protein-coding
47.8666	chr18	21760844	21761503	+	0.133333	NA	intron (NM_020774, intron 1 of 20)	intron (NM_020774, intron 1 of 20)	19844	NM_020774	57534	Hs.140903	NM_020774	ENSG00000101752	MIB1	DIP-1|DIP1|LVNC7|MIB|ZZANK2|ZZZ6	mindbomb E3 ubiquitin protein ligase 1	protein-coding
26.9666	chr11	24038319	24038728	+	0.133333	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-458530	NM_001009909	338645	Hs.144138	NM_001009909	ENSG00000187398	LUZP2	KFSP2566|PRO6246	leucine zipper protein 2	protein-coding
18.7333-6	chr12	103616936	103617076	+	0.133333	NA	intron (NM_017564, intron 3 of 68)	intron (NM_017564, intron 3 of 68)	29733	NM_017564	55576	Hs.408249	NM_017564	ENSG00000136011	STAB2	FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1	stabilin 2	protein-coding
32.5-5	chr14	32659716	32660034	+	0.133333	NA	intron (NM_004274, intron 7 of 13)	intron (NM_004274, intron 7 of 13)	-279004	NM_001165893	64067	Hs.657892	NM_022123	ENSG00000151322	NPAS3	MOP6|PASD6|bHLHe12	neuronal PAS domain protein 3	protein-coding
22.2-9	chr2	154861750	154861966	+	0.133333	NA	Intergenic	L1MEi|LINE|L1	163163	NM_002239	3760	Hs.591606	NM_002239	ENSG00000162989	KCNJ3	GIRK1|KGA|KIR3.1	potassium voltage-gated channel subfamily J member 3	protein-coding
20.4666	chr14	56810284	56810638	+	0.133333	NA	promoter-TSS (NM_021728)	promoter-TSS (NM_021728)	18	NR_073034	5015	Hs.288655	NM_021728	ENSG00000165588	OTX2	CPHD6|MCOPS5	orthodenticle homeobox 2	protein-coding
38.3999-3	chr2	66050805	66051333	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	307259	NR_039938	100616464		NR_039938	ENSG00000264525	MIR4778	-	microRNA 4778	ncRNA
43.8333	chr11	35313423	35314037	+	0.133333	NA	intron (NM_001252652, intron 4 of 11)	intron (NM_001252652, intron 4 of 11)	105828	NM_004171	6506	Hs.502338	NM_004171	ENSG00000110436	SLC1A2	EAAT2|EIEE41|GLT-1|HBGT	solute carrier family 1 member 2	protein-coding
57.3666	chr11	90606827	90607457	+	0.133333	NA	intron (NR_104190, intron 3 of 6)	L1MA2|LINE|L1	-51285	NR_039711	100616186		NR_039711	ENSG00000266703	MIR4490	-	microRNA 4490	ncRNA
20.1-6	chr22	48792537	48792860	+	0.133333	NA	Intergenic	Intergenic	12403	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA
37.0999	chr3	172699683	172699985	+	0.133333	NA	intron (NM_001146276, intron 1 of 4)	AluJb|SINE|Alu	11233	NM_001146277	57552	Hs.444099	NM_020792	ENSG00000144959	NCEH1	AADACL1|NCEH	neutral cholesterol ester hydrolase 1	protein-coding
28.4999	chr3	19244471	19244734	+	0.133333	NA	intron (NM_144633, intron 1 of 15)	L1P4|LINE|L1	70329	NR_039954	100616291		NR_039954	ENSG00000271898	MIR4791	mir-4791	microRNA 4791	ncRNA
30.7	chr1	87234685	87235190	+	0.133333	NA	intron (NM_001290053, intron 2 of 3)	intron (NM_001290053, intron 2 of 3)	22268	NM_001290053	101927844	Hs.694591	NM_001290053		LINC02801	-	long intergenic non-protein coding RNA 2801	protein-coding
26.3999	chr10	4775228	4775426	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-50850	NR_073127	83592	Hs.657944	NM_031436	ENSG00000165568	AKR1E2	AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR	aldo-keto reductase family 1 member E2	protein-coding
32.9666-4	chr16	73975499	73976006	+	0.133333	NA	Intergenic	Intergenic	239769	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA
18.2333-8	chr3	116152400	116152751	+	0.133333	NA	intron (NM_001318915, intron 1 of 8)	intron (NM_001318915, intron 1 of 8)	-207449	NR_109998	101926903	Hs.26479	NR_109998	ENSG00000240922	LSAMP-AS1	-	LSAMP antisense RNA 1	ncRNA
30.3666	chr22	24439936	24440235	+	0.133333	NA	intron (NR_028483, intron 6 of 7)	intron (NR_028483, intron 6 of 7)	7966	NM_001278497	135	Hs.197029	NM_000675	ENSG00000128271	ADORA2A	A2aR|ADORA2|RDC8	adenosine A2a receptor	protein-coding
45.4-4	chr4	28870787	28871405	+	0.133333	NA	Intergenic	Intergenic	51514	NR_036237	100422937		NR_036237	ENSG00000283275	MIR4275	-	microRNA 4275	ncRNA
20.4-17	chr8	73907425	73907604	+	0.133333	NA	Intergenic	HERV9-int|LTR|ERV1	28532	NR_147034	101926947	Hs.521636	NR_147034		LINC01617	C8orf23|NCRNA00249|XLOC_006844	long intergenic non-protein coding RNA 1617	ncRNA
22.9333-9	chr2	207104034	207104355	+	0.133333	NA	intron (NR_073108, intron 3 of 4)	intron (NR_073108, intron 3 of 4)	5879	NR_036227	100423036		NR_036227	ENSG00000253008	MIR2355	mir-2355	microRNA 2355	ncRNA
43.7	chr15	26639273	26639699	+	0.133333	NA	intron (NM_000814, intron 3 of 8)	MER2|DNA|TcMar-Tigger	-10396	NM_001191321	2562	Hs.302352	NM_000814	ENSG00000166206	GABRB3	ECA5|EIEE43	gamma-aminobutyric acid type A receptor beta3 subunit	protein-coding
34.7333-3	chr12	15582285	15582729	+	0.133333	NA	intron (NM_030671, intron 11 of 13)	intron (NM_030671, intron 11 of 13)	35896	NM_030670	5800	Hs.160871	NM_002848	ENSG00000151490	PTPRO	GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O	protein tyrosine phosphatase receptor type O	protein-coding
28.7333-15	chr8	66273807	66274296	+	0.133333	NA	Intergenic	Intergenic	81937	NR_039979	100505659	Hs.529729	NR_039979	ENSG00000253138	LINC00967	-	long intergenic non-protein coding RNA 967	ncRNA
21.6-10	chr3	2584366	2584604	+	0.133333	NA	intron (NM_175607, intron 4 of 24)	AluSq2|SINE|Alu	-307730	NM_175613	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
15.7-7	chr20	1287688	1287805	+	0.133333	NA	intron (NM_014723, intron 2 of 5)	intron (NM_014723, intron 2 of 5)	21452	NM_001318234	9751	Hs.323833	NM_014723	ENSG00000101298	SNPH	-	syntaphilin	protein-coding
17.2333-7	chr3	35317057	35317255	+	0.133333	NA	intron (NR_110817, intron 1 of 3)	intron (NR_110817, intron 1 of 3)	76867	NR_110817	101928135	Hs.550715	NR_110817		LOC101928135	-	uncharacterized LOC101928135	ncRNA
23.7-4	chr17	3879902	3880265	+	0.133333	NA	intron (NM_172206, intron 9 of 15)	intron (NM_172206, intron 9 of 15)	10660	NM_172206	84254	Hs.8417	NM_032294	ENSG00000004660	CAMKK1	CAMKKA	calcium/calmodulin dependent protein kinase kinase 1	protein-coding
25.2666	chr1	32299561	32299892	+	0.133333	NA	intron (NM_004964, intron 1 of 13)	intron (NM_004964, intron 1 of 13)	7643	NM_004964	3065	Hs.88556	NM_004964	ENSG00000116478	HDAC1	GON-10|HD1|KDAC1|RPD3|RPD3L1	histone deacetylase 1	protein-coding
24.6333-10	chr7	1464932	1465164	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-5578	NM_182924	79778	Hs.376617	NM_024723	ENSG00000164877	MICALL2	JRAB|MICAL-L2	MICAL like 2	protein-coding
36.3666-2	chr21	10432218	10432583	+	0.133333	NA	intron (NM_001187, intron 3 of 4)	AluSx1|SINE|Alu	18868	NM_181704	85317	Hs.545789	NM_181704		BAGE4	CT2.4|MLL3P	BAGE family member 4	protein-coding
45.1333-3	chr7	124918676	124919336	+	0.133333	NA	intron (NM_001042594, intron 2 of 17)	Tigger3a|DNA|TcMar-Tigger	10819	NM_015450	25913	Hs.31968	NM_015450	ENSG00000128513	POT1	CMM10|GLM9|HPOT1	protection of telomeres 1	protein-coding
33.4-5	chr2	104834691	104834993	+	0.133333	NA	intron (NR_037883, intron 1 of 3)	intron (NR_037883, intron 1 of 3)	16634	NR_037883	100506421	Hs.437281	NR_037883	ENSG00000233639	PANTR1	LINC01158|linc-Brn1a|linc-POU3F3	POU3F3 adjacent non-coding transcript 1	ncRNA
38.4-6	chr20	38914143	38914551	+	0.133333	NA	intron (NM_015568, intron 10 of 10)	MER92B|LTR|ERV1	-12070	NM_030919	81610	Hs.726442	NM_030919	ENSG00000101447	FAM83D	C20orf129|CHICA|dJ616B8.3	family with sequence similarity 83 member D	protein-coding
38.8333-3	chr5	6698782	6699372	+	0.133333	NA	intron (NR_103771, intron 2 of 2)	intron (NR_103771, intron 2 of 2)	8634	NR_103771	100505625	Hs.550028	NR_103771	ENSG00000248677	LINC02102	-	long intergenic non-protein coding RNA 2102	ncRNA
16.2667-4	chr2	65918171	65918366	+	0.133333	NA	Intergenic	Intergenic	440060	NR_039938	100616464		NR_039938	ENSG00000264525	MIR4778	-	microRNA 4778	ncRNA
36.4666-3	chr8	121535378	121535831	+	0.133333	NA	Intergenic	Intergenic	-103742	NR_002835	594842	Hs.668686	NR_002835		HAS2-AS1	HAS2-AS|HAS2AS|HASNT|NCRNA00077	HAS2 antisense RNA 1	ncRNA
27.8999-3	chr6	74580909	74581121	+	0.133333	NA	intron (NR_110856, intron 2 of 3)	intron (NR_110856, intron 2 of 3)	511564	NR_110856	101928516	Hs.384600	NR_110856	ENSG00000223786	LOC101928516	-	uncharacterized LOC101928516	ncRNA
7.86665	chr6	35111990	35112066	+	0.133333	NA	Intergenic	L1MDa|LINE|L1	29311	NM_001366330	6954	Hs.435371	NM_018679	ENSG00000124678	TCP11	D6S230E|FPPR	t-complex 11	protein-coding
56.0666-2	chr14	49811352	49811941	+	0.133333	NA	intron (NM_001301732, intron 17 of 31)	L1MB7|LINE|L1	41142	NM_004713	9147	Hs.655964	NM_004713	ENSG00000165525	NEMF	NY-CO-1|SDCCAG1	nuclear export mediator factor	protein-coding
20.6-13	chr7	27796102	27796309	+	0.133333	NA	exon (NM_001206901, exon 12 of 17)	exon (NM_001206901, exon 12 of 17)	56110	NM_001362795	8887	Hs.34576	NM_006024	ENSG00000106052	TAX1BP1	CALCOCO3|T6BP|TXBP151	Tax1 binding protein 1	protein-coding
38.7333-2	chr14	43390900	43391423	+	0.133333	NA	Intergenic	L1PA2|LINE|L1	1116122	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
50.3666	chr6	130286190	130286607	+	0.133333	NA	intron (NM_001258275, intron 2 of 13)	intron (NM_001258275, intron 2 of 13)	-63447	NM_001017373	154075	Hs.440508	NM_152552	ENSG00000164483	SAMD3	-	sterile alpha motif domain containing 3	protein-coding
36.8666-4	chr3	34425130	34425551	+	0.133333	NA	Intergenic	Tigger3a|DNA|TcMar-Tigger	626710	NM_013374	10015	Hs.475896	NM_013374	ENSG00000170248	PDCD6IP	AIP1|ALIX|DRIP4|HP95	programmed cell death 6 interacting protein	protein-coding
30.4333-5	chr3	134387011	134387274	+	0.133333	NA	Intergenic	Intergenic	-11725	NM_001278683	51421	Hs.426312	NM_016201	ENSG00000114019	AMOTL2	LCCP	angiomotin like 2	protein-coding
27.8-7	chr14	89243672	89243917	+	0.133333	NA	intron (NM_001085471, intron 4 of 6)	intron (NM_001085471, intron 4 of 6)	173439	NM_005197	1112	Hs.434286	NM_005197	ENSG00000053254	FOXN3	C14orf116|CHES1|PRO1635	forkhead box N3	protein-coding
44.0333	chr1	49762519	49762936	+	0.133333	NA	intron (NM_001323575, intron 2 of 12)	L1MA6|LINE|L1	261227	NM_032785	84871	Hs.551844	NM_032785	ENSG00000186094	AGBL4	CCP6	ATP/GTP binding protein like 4	protein-coding
27.0666-3	chr4	33576735	33577014	+	0.133333	NA	Intergenic	L1MCa|LINE|L1	463019	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
12.2-8	chr7	37529415	37529519	+	0.133333	NA	Intergenic	Intergenic	-80141	NM_001206480	9844	Hs.434989	NM_014800	ENSG00000155849	ELMO1	CED-12|CED12|ELMO-1	engulfment and cell motility 1	protein-coding
32.2666-2	chr1	92655904	92656263	+	0.133333	NA	intron (NM_005665, intron 11 of 17)	L1PB4|LINE|L1	129025	NM_001350197	7813	Hs.594434	NM_005665	ENSG00000067208	EVI5	EVI-5|NB4S	ecotropic viral integration site 5	protein-coding
34.4666	chr1	232920053	232920362	+	0.133333	NA	Intergenic	Intergenic	-30404	NR_138025	84284	Hs.642715	NM_032324	ENSG00000135778	NTPCR	C1orf57|HCR-NTPase|THEP1	nucleoside-triphosphatase, cancer-related	protein-coding
27.7-4	chr14	45376741	45377321	+	0.133333	NA	Intergenic	Intergenic	-123829	NM_018353	55320	Hs.732769	NM_018353	ENSG00000129534	MIS18BP1	C14orf106|HSA242977|KNL2|M18BP1	MIS18 binding protein 1	protein-coding
43.2666-3	chr2	96297014	96297778	+	0.133333	NA	exon (NM_014014, exon 11 of 45)	exon (NM_014014, exon 11 of 45)	8150	NM_014014	23020	Hs.246112	NM_014014	ENSG00000144028	SNRNP200	ASCC3L1|BRR2|HELIC2|RP33|U5-200KD	small nuclear ribonucleoprotein U5 subunit 200	protein-coding
34.5333-4	chr15	94577361	94577723	+	0.133333	NA	Intergenic	Intergenic	221612	NM_001159644	55784	Hs.33368	NM_018349	ENSG00000140563	MCTP2	-	multiple C2 and transmembrane domain containing 2	protein-coding
44.3999-2	chr5	152381207	152381660	+	0.133333	NA	Intergenic	AluYa5|SINE|Alu	23846	NM_020167	56923	Hs.731911	NM_020167	ENSG00000132911	NMUR2	FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1	neuromedin U receptor 2	protein-coding
41.1999-3	chr15	47345607	47346024	+	0.133333	NA	intron (NM_001198999, intron 1 of 19)	L1ME2|LINE|L1	161726	NM_001198999	80031	Hs.511265	NM_020858	ENSG00000137872	SEMA6D	-	semaphorin 6D	protein-coding
16.9333-6	chr12	46049266	46049555	+	0.133333	NA	Intergenic	L1PA16|LINE|L1	-58836	NM_004719	9169	Hs.210367	NM_004719	ENSG00000139218	SCAF11	CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP	SR-related CTD associated factor 11	protein-coding
48.3332	chr4	40567591	40567978	+	0.133333	NA	intron (NM_001371114, intron 1 of 5)	intron (NM_001371114, intron 1 of 5)	-51799	NM_019027	54502	Hs.518727	NM_019027	ENSG00000163694	RBM47	NET18	RNA binding motif protein 47	protein-coding
17.1333-9	chr16	54648091	54648392	+	0.133333	NA	Intergenic	Intergenic	199992	NR_134971	101927480	Hs.499208	NR_134971	ENSG00000245694	LOC101927480	-	uncharacterized LOC101927480	ncRNA
20.4-5	chr14	40787435	40787705	+	0.133333	NA	Intergenic	Intergenic	-167141	NR_109757	644919	Hs.434414	NR_109757		LINC02315	-	long intergenic non-protein coding RNA 2315	ncRNA
24.8-3	chr1	186769548	186769843	+	0.133333	NA	Intergenic	L2|LINE|L2	-59205	NM_024420	5321	Hs.497200	NM_024420	ENSG00000116711	PLA2G4A	GURDP|PLA2G4|cPLA2|cPLA2-alpha	phospholipase A2 group IVA	protein-coding
44.6999	chr1	62963445	62964026	+	0.133333	NA	Intergenic	Intergenic	47190	NR_146607	105378769	Hs.435002	NR_146605	ENSG00000229537	LINC01739	-	long intergenic non-protein coding RNA 1739	ncRNA
38.4-5	chr2	178226648	178227126	+	0.133333	NA	intron (NM_001201480, intron 1 of 25)	L1ME3F|LINE|L1	32375	NM_032523	114880	Hs.318775	NM_032523	ENSG00000079156	OSBPL6	ORP6	oxysterol binding protein like 6	protein-coding
32.3666-2	chr12	96169680	96170162	+	0.133333	NA	Intergenic	LTR81A|LTR|Gypsy	-24454	NM_005230	2004	Hs.46523	NM_005230	ENSG00000111145	ELK3	ERP|NET|SAP-2|SAP2	ETS transcription factor ELK3	protein-coding
12.6667	chr1	59656497	59656661	+	0.133333	NA	intron (NM_001350790, intron 12 of 16)	intron (NM_001350790, intron 12 of 16)	76717	NR_039861	100616409		NR_039861	ENSG00000266150	MIR4711	-	microRNA 4711	ncRNA
19.8667-4	chr19	6758537	6758769	+	0.133333	NA	intron (NM_005490, intron 4 of 9)	L2a|LINE|L2	8782	NM_005490	10045	Hs.439645	NM_005490	ENSG00000125731	SH2D3A	NSP1	SH2 domain containing 3A	protein-coding
24.6333-2	chr17	5562982	5563337	+	0.133333	NA	intron (NM_014922, intron 3 of 15)	L1PA13|LINE|L1	21350	NM_014922	22861	Hs.652273	NM_014922	ENSG00000091592	NLRP1	AIADK|CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|MSPC|NAC|NALP1|PP1044|SLEV1|VAMAS1	NLR family pyrin domain containing 1	protein-coding
35.5666	chr1	61145908	61146178	+	0.133333	NA	intron (NM_001134673, intron 2 of 10)	MLT1D|LTR|ERVL-MaLR	63482	NM_001134673	4774	Hs.740757	NM_005595	ENSG00000162599	NFIA	BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L	nuclear factor I A	protein-coding
32.8333	chr10	75773202	75773848	+	0.133333	NA	intron (NR_131178, intron 1 of 7)	intron (NR_131178, intron 1 of 7)	-9236	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	LRMDA	C10orf11|CDA017	leucine rich melanocyte differentiation associated	protein-coding
18.1666-3	chr2	19726030	19726403	+	0.133333	NA	Intergenic	Intergenic	-142638	NR_033875	400946	Hs.289062	NR_033875	ENSG00000228784	LINC00954	-	long intergenic non-protein coding RNA 954	ncRNA
33.3333	chr12	10144590	10145087	+	0.133333	NA	Intergenic	AluY|SINE|Alu	-14569	NM_197947	64581	Hs.143929	NM_022570	ENSG00000172243	CLEC7A	BGR|CANDF4|CD369|CLECSF12|DECTIN1|SCARE2	C-type lectin domain containing 7A	protein-coding
35.5666-3	chr17	73162561	73162958	+	0.133333	NA	Intergenic	(GAAA)n|Simple_repeat|Simple_repeat	-2251	NM_001050	6752	Hs.514451	NM_001050	ENSG00000180616	SSTR2	-	somatostatin receptor 2	protein-coding
46.1333-2	chr14	34201213	34201736	+	0.133333	NA	Intergenic	L1ME4a|LINE|L1	-250400	NM_022073	112399	Hs.135507	NM_022073	ENSG00000129521	EGLN3	HIFP4H3|HIFPH3|PHD3	egl-9 family hypoxia inducible factor 3	protein-coding
16.9	chr1	87861175	87861301	+	0.133333	NA	Intergenic	Intergenic	-489583	NR_038324	100505768	Hs.125247	NR_038324	ENSG00000227290	LINC01364	-	long intergenic non-protein coding RNA 1364	ncRNA
18.5333-8	chr16	11146909	11147132	+	0.133333	NA	intron (NM_015226, intron 21 of 22)	L2a|LINE|L2	109162	NM_003745	8651	Hs.50640	NM_003745	ENSG00000185338	SOCS1	CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3	suppressor of cytokine signaling 1	protein-coding
34.8-4	chr17	53914018	53914465	+	0.133333	NA	Intergenic	MLT1E|LTR|ERVL-MaLR	91314	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
23.2666-2	chr9	100644873	100645219	+	0.133333	NA	Intergenic	L2a|LINE|L2	66967	NM_001018116	347273	Hs.99004	NM_001018116	ENSG00000170681	CAVIN4	MURC|cavin-4	caveolae associated protein 4	protein-coding
20.2-11	chr4	165475831	165476051	+	0.133333	NA	intron (NM_001873, intron 3 of 8)	MER50-int|LTR|ERV1	89699	NR_030304	693163		NR_030304	ENSG00000207559	MIR578	MIRN578|hsa-mir-578	microRNA 578	ncRNA
18.1333-8	chr15	91670372	91670598	+	0.133333	NA	Intergenic	Intergenic	-183223	NM_013272	28232	Hs.311187	NM_013272	ENSG00000176463	SLCO3A1	OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11	solute carrier organic anion transporter family member 3A1	protein-coding
33.2-6	chr13	20341810	20342133	+	0.133333	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	91875	NR_039721	100616304		NR_039721	ENSG00000263978	MIR4499	-	microRNA 4499	ncRNA
29.8666-4	chr21	22754008	22754363	+	0.133333	NA	Intergenic	Intergenic	-325099	NR_106746	102466967		NR_106746	ENSG00000275469	MIR6130	hsa-mir-6130	microRNA 6130	ncRNA
27.4-2	chr1	200017133	200017503	+	0.133333	NA	Intergenic	AluSz|SINE|Alu	-10392	NM_205860	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding
20.8-14	chr5	762400	762686	+	0.133333	NA	intron (NM_001351303, intron 1 of 10)	intron (NM_001351303, intron 1 of 10)	4376	NM_001351303	653082		NM_001351303	ENSG00000206077	ZDHHC11B	DHHC-11B	zinc finger DHHC-type containing 11B	protein-coding
39.3333-2	chr15	80243907	80244467	+	0.133333	NA	intron (NM_001352888, intron 1 of 2)	intron (NM_001352888, intron 1 of 2)	8026	NM_001352888	100996492	Hs.20034	NM_001352888	ENSG00000259417	CTXND1	LINC01314	cortexin domain containing 1	protein-coding
45.6332	chr3	53091899	53092266	+	0.133333	NA	intron (NM_052859, intron 12 of 12)	intron (NM_052859, intron 12 of 12)	38353	NM_052859	91869	Hs.631910	NM_052859	ENSG00000163933	RFT1	CDG1N	RFT1 homolog	protein-coding
16.0666	chr3	82131531	82131651	+	0.133333	NA	intron (NR_147146, intron 1 of 8)	MSTA|LTR|ERVL-MaLR	145449	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
11.8-4	chr15	89674486	89674648	+	0.133333	NA	intron (NM_001145311, intron 2 of 8)	L3|LINE|CR1	4800	NM_001145311	5346	Hs.103253	NM_002666	ENSG00000166819	PLIN1	FPLD4|PERI|PLIN	perilipin 1	protein-coding
38.4667-3	chr3	96016863	96017373	+	0.133333	NA	Intergenic	Intergenic	-333925	NR_077228	100287639	Hs.591320	NR_077228	ENSG00000244681	MTHFD2P1	-	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1	pseudo
17.4-13	chrX	74443241	74443416	+	0.133333	NA	intron (NM_006517, intron 1 of 5)	MIR3|SINE|MIR	21835	NM_006517	6567	Hs.75317	NM_006517	ENSG00000147100	SLC16A2	AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT	solute carrier family 16 member 2	protein-coding
41.1333-9	chr4	54471357	54471946	+	0.133333	NA	Intergenic	L1MEi|LINE|L1	135480	NR_134657	339978		NR_134657	ENSG00000250456	LINC02260	-	long intergenic non-protein coding RNA 2260	ncRNA
27.4666-6	chr4	131094079	131094386	+	0.133333	NA	Intergenic	Tigger13a|DNA|TcMar-Tigger	-670606	NR_125883	101927305	Hs.507924	NR_125883		SNHG27	-	small nucleolar RNA host gene 27	ncRNA
25.3333-16	chr9	138003362	138003611	+	0.133333	NA	intron (NM_001243812, intron 15 of 45)	L1ME3Cz|LINE|L1	41585	NR_121582	101928786	Hs.678847	NR_121582		LOC101928786	-	uncharacterized LOC101928786	ncRNA
28.5333	chr1	237285909	237286129	+	0.133333	NA	intron (NM_001035, intron 2 of 104)	L1PBa1|LINE|L1	-185100	NR_039626	100616141		NR_039626	ENSG00000266262	MIR4428	-	microRNA 4428	ncRNA
22.5333-17	chr6	85770760	85771320	+	0.133333	NA	Intergenic	L1PB1|LINE|L1	-92307	NR_003038	387066	Hs.292457	NR_003038	ENSG00000203875	SNHG5	C6orf160|LINC00044|NCRNA00044|U50HG	small nucleolar RNA host gene 5	ncRNA
32.7-3	chr12	111909423	111909975	+	0.133333	NA	Intergenic	L1MA2|LINE|L1	10636	NR_036636	8759	Hs.661708	NR_036636		ADAM1A	ADAM1|ADAM1P|FTNAP|Ftna|PH-30a	ADAM metallopeptidase domain 1A (pseudogene)	pseudo
25.7333-6	chr14	74667773	74668011	+	0.133333	NA	intron (NM_001039479, intron 15 of 19)	intron (NM_001039479, intron 15 of 19)	45188	NM_001039479	9870	Hs.497417	NM_014821	ENSG00000119682	AREL1	FIEL1|KIAA0317	apoptosis resistant E3 ubiquitin protein ligase 1	protein-coding
16.9333-14	chr5	25723975	25724202	+	0.133333	NA	Intergenic	Intergenic	533135	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
21.0666-2	chr3	78910278	78910576	+	0.133333	NA	intron (NM_002941, intron 4 of 30)	intron (NM_002941, intron 4 of 30)	109032	NM_001145845	6091	Hs.744218	NM_002941	ENSG00000169855	ROBO1	DUTT1|SAX3	roundabout guidance receptor 1	protein-coding
41.6333-3	chr20	47320572	47320977	+	0.133333	NA	TTS (NR_024594)	TTS (NR_024594)	2272	NR_024594	100131496	Hs.662547	NR_024594	ENSG00000267882	LOC100131496	-	uncharacterized LOC100131496	ncRNA
46.0999	chr10	36097664	36098053	+	0.133333	NA	Intergenic	L1ME3Cz|LINE|L1	319556	NR_110138	102578074		NR_110138	ENSG00000280719	PCAT5	LINC01452|TPCAT-10-36067	prostate cancer associated transcript 5	ncRNA
36.9-7	chr8	58571469	58571802	+	0.133333	NA	intron (NM_001348339, intron 3 of 7)	intron (NM_001348339, intron 3 of 7)	18374	NM_005625	6386	Hs.200804	NM_005625	ENSG00000137575	SDCBP	MDA-9|MDA9|ST1|SYCL|TACIP18	syndecan binding protein	protein-coding
31.2666-5	chr2	67719918	67720199	+	0.133333	NA	Intergenic	Intergenic	105504	NR_110271	101927701	Hs.348697	NR_110271	ENSG00000237013	LINC01812	-	long intergenic non-protein coding RNA 1812	ncRNA
24.5666-3	chr14	56692282	56692584	+	0.133333	NA	Intergenic	Intergenic	112635	NM_017799	54916	Hs.497253	NM_017799	ENSG00000070269	TMEM260	C14orf101|SHDRA	transmembrane protein 260	protein-coding
32.8666-2	chr1	182347159	182347420	+	0.133333	NA	Intergenic	HAL1M8|LINE|L1	-33228	NR_104175	400799	Hs.634884	NR_104175	ENSG00000228918	LINC01344	GS1-122H1.2	long intergenic non-protein coding RNA 1344	ncRNA
17.6-12	chr7	69968875	69969079	+	0.133333	NA	intron (NM_015570, intron 2 of 18)	intron (NM_015570, intron 2 of 18)	370502	NM_001127231	26053	Hs.21631	NM_015570	ENSG00000158321	AUTS2	FBRSL2|MRD26	activator of transcription and developmental regulator AUTS2	protein-coding
40.2999	chr2	173213934	173214236	+	0.133333	NA	intron (NR_033882, intron 4 of 7)	intron (NR_033882, intron 4 of 7)	67951	NR_033882	339751	Hs.570083	NR_033882	ENSG00000238133	MAP3K20-AS1	MLK7-AS1	MAP3K20 antisense RNA 1	ncRNA
47.8999	chr1	79724861	79725284	+	0.133333	NA	Intergenic	L1MEg|LINE|L1	-718342	NM_022159	64123	Hs.132314	NM_022159	ENSG00000162618	ADGRL4	ELTD1|ETL|KPG_003	adhesion G protein-coupled receptor L4	protein-coding
29.7333-10	chr22	37834509	37834906	+	0.133333	NA	intron (NM_001349853, intron 3 of 7)	AluJb|SINE|Alu	9141	NM_001363839	129138	Hs.135259	NM_138797	ENSG00000100124	ANKRD54	LIAR	ankyrin repeat domain 54	protein-coding
59.6667	chr2	199387597	199388455	+	0.133333	NA	intron (NM_001172509, intron 3 of 10)	intron (NM_001172509, intron 3 of 10)	69913	NM_001172509	23314	Hs.516617	NM_015265	ENSG00000119042	SATB2	GLSS	SATB homeobox 2	protein-coding
28.6666-5	chr18	75533442	75533803	+	0.133333	NA	Intergenic	Intergenic	-105919	NM_001303482	284274	Hs.666744	NM_001037331	ENSG00000206026	SMIM21	C18orf62	small integral membrane protein 21	protein-coding
29.5-5	chr17	64634484	64634746	+	0.133333	NA	intron (NM_022739, intron 1 of 18)	HAL1|LINE|L1	27692	NM_022739	64750	Hs.515011	NM_022739	ENSG00000108854	SMURF2	-	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
36.9333-3	chr18	78283344	78283745	+	0.133333	NA	Intergenic	AluSx3|SINE|Alu	-289817	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA
31.4667-8	chr7	40595996	40596409	+	0.133333	NA	intron (NM_001193312, intron 11 of 12)	intron (NM_001193312, intron 11 of 12)	383737	NR_110831	101928744	Hs.639767	NR_110831	ENSG00000232458	LINC01450	-	long intergenic non-protein coding RNA 1450	ncRNA
45.7666	chr11	92034138	92034553	+	0.133333	NA	Intergenic	Intergenic	-190689	NM_001367949	120114	Hs.98523	NM_001008781	ENSG00000165323	FAT3	CDHF15|CDHR10|hFat3	FAT atypical cadherin 3	protein-coding
39.1333-2	chr17	15280264	15280732	+	0.133333	NA	Intergenic	MER33|DNA|hAT-Charlie	-15172	NM_001281456	5376	Hs.372031	NM_000304	ENSG00000109099	PMP22	CIDP|CMT1A|CMT1E|DSS|GAS-3|GAS3|HMSNIA|HNPP|Sp110	peripheral myelin protein 22	protein-coding
22.4-7	chr14	37109302	37109578	+	0.133333	NA	intron (NM_001171170, intron 1 of 10)	intron (NM_001171170, intron 1 of 10)	-62586	NR_033240	100129794	Hs.601579	NR_033240	ENSG00000258708	SLC25A21-AS1	-	SLC25A21 antisense RNA 1	ncRNA
27.7333-3	chr13	68311092	68311429	+	0.133333	NA	Intergenic	A-rich|Low_complexity|Low_complexity	574065	NR_038878	338862		NR_038878	ENSG00000281778	LINC00550	-	long intergenic non-protein coding RNA 550	ncRNA
42.3666-3	chr7	7333800	7334344	+	0.133333	NA	Intergenic	L1PA16|LINE|L1	78918	NR_108073	101927354	Hs.520664	NR_108073		LOC101927354	-	uncharacterized LOC101927354	ncRNA
32.4-6	chr2	188950235	188950670	+	0.133333	NA	Intergenic	MER2|DNA|TcMar-Tigger	-23921	NM_000090	1281	Hs.443625	NM_000090	ENSG00000168542	COL3A1	EDS4A|EDSVASC|PMGEDSV	collagen type III alpha 1 chain	protein-coding
17.3333-6	chr20	32580416	32580579	+	0.133333	NA	intron (NM_001256798, intron 1 of 10)	Charlie22a|DNA|hAT-Charlie	4836	NM_001256798	140688	Hs.516978	NM_080616	ENSG00000197183	NOL4L	C20orf112|C20orf113	nucleolar protein 4 like	protein-coding
40.0666-5	chr8	58306411	58306795	+	0.133333	NA	Intergenic	L1M4|LINE|L1	-34502	NR_105005	101929528	Hs.563551	NR_105005	ENSG00000253281	LOC101929528	-	uncharacterized LOC101929528	ncRNA
9.66665-2	chr7	27040609	27040781	+	0.133333	NA	Intergenic	MIR|SINE|MIR	55305	NM_153620	3198	Hs.67397	NM_005522	ENSG00000105991	HOXA1	BSAS|HOX1|HOX1F	homeobox A1	protein-coding
31.0333	chr1	41813531	41813811	+	0.133333	NA	intron (NM_024503, intron 1 of 8)	intron (NM_024503, intron 1 of 8)	105251	NM_001127714	59269	Hs.403972	NM_024503	ENSG00000127124	HIVEP3	KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C	human immunodeficiency virus type I enhancer binding protein 3	protein-coding
13.0667-12	chr9	94189507	94189693	+	0.133333	NA	intron (NR_160773, intron 2 of 2)	L1MD|LINE|L1	10766	NR_029481	406886		NR_029481	ENSG00000199133	MIRLET7D	LET7D|MIRNLET7D|hsa-let-7d|let-7d	microRNA let-7d	ncRNA
13.0333-4	chr5	123697632	123697802	+	0.133333	NA	Intergenic	Intergenic	152300	NM_001044723	1456	Hs.129206	NM_004384	ENSG00000151292	CSNK1G3	CKI-gamma 3|CSNK1G3L	casein kinase 1 gamma 3	protein-coding
43.2666-5	chr6	94261981	94262354	+	0.133333	NA	Intergenic	Intergenic	543864	NR_152795	643432	Hs.509936	NR_015362		TSG1	-	tumor suppressor TSG1	ncRNA
17.9-9	chr4	94333272	94333535	+	0.133333	NA	intron (NM_014485, intron 2 of 5)	MLT1J|LTR|ERVL-MaLR	9433	NM_014485	27306	Hs.128433	NM_014485	ENSG00000163106	HPGDS	GSTS|GSTS1|GSTS1-1|PGD2|PGDS	hematopoietic prostaglandin D synthase	protein-coding
66.2333	chr10	16733493	16734273	+	0.133333	NA	intron (NM_152724, intron 6 of 7)	intron (NM_152724, intron 6 of 7)	83541	NM_012425	6251	Hs.524161	NM_012425	ENSG00000148484	RSU1	RSP-1	Ras suppressor protein 1	protein-coding
25.9666-4	chr8	125521393	125521693	+	0.133333	NA	Intergenic	Intergenic	89334	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding
21.2666-6	chr3	123292035	123292279	+	0.133333	NA	intron (NM_183357, intron 17 of 20)	intron (NM_183357, intron 17 of 20)	90214	NM_012430	26984	Hs.477361	NM_012430	ENSG00000121542	SEC22A	SEC22L2	SEC22 homolog A, vesicle trafficking protein	protein-coding
43.2999	chr15	92263668	92264034	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	-130030	NM_006011	8128	Hs.302341	NM_006011	ENSG00000140557	ST8SIA2	HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
35.2333-7	chrX	51449202	51449727	+	0.133333	NA	Intergenic	ERVL-B4-int|LTR|ERVL	42516	NM_203407	340602	Hs.97053	NM_203407	ENSG00000187690	EZHIP	CXorf67	EZH inhibitory protein	protein-coding
18.8667-10	chr4	58110924	58111288	+	0.133333	NA	Intergenic	Intergenic	425222	NR_133943	105377671	Hs.225045	NR_133943	ENSG00000250340	LINC02494	-	long intergenic non-protein coding RNA 2494	ncRNA
23.8667-7	chr3	95074734	95075031	+	0.133333	NA	Intergenic	Intergenic	136619	NR_015400	255025	Hs.130994	NR_015400	ENSG00000239589	LINC00879	-	long intergenic non-protein coding RNA 879	ncRNA
21.3666-2	chr17	58577023	58577212	+	0.133333	NA	intron (NM_031272, intron 21 of 31)	MIRb|SINE|MIR	-32789	NM_001368772	5414	Hs.287518	NM_004574	ENSG00000108387	SEPTIN4	ARTS|BRADEION|C17orf47|CE5B3|H5|MART|PNUTL2|SEP4|SEPT4|hCDCREL-2|hucep-7	septin 4	protein-coding
19.6333-11	chr5	114073126	114073517	+	0.133333	NA	Intergenic	Intergenic	-288749	NM_021614	3781	Hs.98280	NM_021614	ENSG00000080709	KCNN2	KCa2.2|SK2|SKCA2|SKCa 2|hSK2	potassium calcium-activated channel subfamily N member 2	protein-coding
56.0333	chr10	55475338	55476031	+	0.133333	NA	intron (NM_001354404, intron 2 of 34)	Tigger4b|DNA|TcMar-Tigger	-123358	NM_001190478	100463289		NM_001190478	ENSG00000249860	MTRNR2L5	HN5	MT-RNR2 like 5	protein-coding
17.8-4	chr11	75790278	75790437	+	0.133333	NA	intron (NM_032564, intron 3 of 7)	intron (NM_032564, intron 3 of 7)	21579	NM_032564	84649	Hs.129798	NM_032564	ENSG00000062282	DGAT2	ARAT|GS1999FULL|HMFN1045	diacylglycerol O-acyltransferase 2	protein-coding
33.8666-4	chr6	116482349	116482649	+	0.133333	NA	Intergenic	L2c|LINE|L2	21124	NM_001010919	441168	Hs.381220	NM_001010919	ENSG00000188820	CALHM6	C6orf187|FAM26F|INAM|dJ93H18.5	calcium homeostasis modulator family member 6	protein-coding
17.9333-2	chr1	79078741	79078882	+	0.133333	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-72081	NM_022159	64123	Hs.132314	NM_022159	ENSG00000162618	ADGRL4	ELTD1|ETL|KPG_003	adhesion G protein-coupled receptor L4	protein-coding
35.9333-2	chr2	226065953	226066292	+	0.133333	NA	Intergenic	Intergenic	-76672	NR_046102	646736	Hs.712836	NR_046102		LOC646736	-	uncharacterized LOC646736	ncRNA
31.1333-7	chr3	32493538	32493910	+	0.133333	NA	intron (NM_017801, intron 1 of 3)	L2c|LINE|L2	9128	NM_017801	54918	Hs.380627	NM_017801	ENSG00000091317	CMTM6	CKLFSF6|PRO2219	CKLF like MARVEL transmembrane domain containing 6	protein-coding
37.9999	chr3	187019316	187019669	+	0.133333	NA	intron (NM_173216, intron 2 of 7)	(TG)n|Simple_repeat|Simple_repeat	-2363	NM_003032	6480	Hs.207459	NM_003032	ENSG00000073849	ST6GAL1	SIAT1|ST6GalI|ST6N	ST6 beta-galactoside alpha-2,6-sialyltransferase 1	protein-coding
25.1666-6	chr9	132209736	132210127	+	0.133333	NA	intron (NM_032536, intron 3 of 7)	L2a|LINE|L2	47873	NM_032536	84628	Hs.163642	NM_032536	ENSG00000196358	NTNG2	LHLL9381|Lmnt2|NTNG1|bA479K20.1	netrin G2	protein-coding
14.6	chr10	32850194	32850361	+	0.133333	NA	intron (NM_001321115, intron 40 of 43)	LTR50|LTR|ERVL	51195	NR_132768	106633814		NR_132768		SNORA86	-	small nucleolar RNA, H/ACA box 86	snoRNA
41.7333-6	chr5	26363548	26364032	+	0.133333	NA	Intergenic	THE1D-int|LTR|ERVL-MaLR	674796	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
30.9666-4	chr9	106839494	106840018	+	0.133333	NA	Intergenic	L2a|LINE|L2	-23410	NM_021224	58499	Hs.370379	NM_021224	ENSG00000148143	ZNF462	ZFPIP|Zfp462	zinc finger protein 462	protein-coding
54.6666-4	chrX	70977919	70978461	+	0.133333	NA	Intergenic	Intergenic	-47094	NM_001048164	84889	Hs.175220	NM_032803	ENSG00000165349	SLC7A3	ATRC3|CAT-3|CAT3	solute carrier family 7 member 3	protein-coding
44.6332	chr8	138093333	138093768	+	0.133333	NA	Intergenic	THE1D-int|LTR|ERVL-MaLR	-10005	NR_161374	401478	Hs.654931	NM_001354876		LOC401478	-	uncharacterized LOC401478	ncRNA
28.7999-4	chr5	101267783	101268130	+	0.133333	NA	Intergenic	Intergenic	-364674	NM_175052	7903	Hs.308628	NM_005668	ENSG00000113532	ST8SIA4	PST|PST1|SIAT8D|ST8SIA-IV	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	protein-coding
25.6-5	chr17	3048025	3048406	+	0.133333	NA	Intergenic	L1M5|LINE|L1	15392	NM_014566	8386	Hs.553508	NM_014566	ENSG00000262628	OR1D5	C17orf2|OR17-2|OR17-30|OR17-31|OR1D4	olfactory receptor family 1 subfamily D member 5	protein-coding
23-6	chr17	8159444	8159821	+	0.133333	NA	3' UTR (NM_001330125, exon 5 of 5)	3' UTR (NM_001330125, exon 5 of 5)	3244	NM_001330125	6844	Hs.25348	NM_014232	ENSG00000220205	VAMP2	SYB2|VAMP-2	vesicle associated membrane protein 2	protein-coding
31.2999-2	chr2	23902819	23903301	+	0.133333	NA	intron (NR_125717, intron 1 of 28)	AluJo|SINE|Alu	24063	NM_001242338	54454	Hs.467862	NM_017552	ENSG00000119778	ATAD2B	-	ATPase family AAA domain containing 2B	protein-coding
43.8666-5	chr4	99954650	99955328	+	0.133333	NA	intron (NR_125923, intron 1 of 3)	MER2|DNA|TcMar-Tigger	4495	NR_125923	256880	Hs.448554	NR_002799	ENSG00000245322	LOC256880	-	uncharacterized LOC256880	ncRNA
28.2-16	chr8	81936997	81937349	+	0.133333	NA	Intergenic	Intergenic	-94887	NM_022133	64089	Hs.492121	NM_022133	ENSG00000104497	SNX16	-	sorting nexin 16	protein-coding
29.2666-2	chr12	68722226	68722575	+	0.133333	NA	intron (NM_020401, intron 17 of 27)	intron (NM_020401, intron 17 of 27)	-23776	NM_001354997	55508	Hs.506011	NM_018656	ENSG00000175782	SLC35E3	BLOV1	solute carrier family 35 member E3	protein-coding
17.6333	chr1	11462638	11462852	+	0.133333	NA	Intergenic	Intergenic	-16410	NM_020780	57540	Hs.202355	NM_020780	ENSG00000204624	DISP3	PTCHD2	dispatched RND transporter family member 3	protein-coding
26.7333-3	chr10	107759138	107759462	+	0.133333	NA	Intergenic	Intergenic	309993	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
32.7333-2	chr11	91954612	91955032	+	0.133333	NA	Intergenic	Intergenic	-270212	NM_001367949	120114	Hs.98523	NM_001008781	ENSG00000165323	FAT3	CDHF15|CDHR10|hFat3	FAT atypical cadherin 3	protein-coding
34.0333-4	chr2	71681027	71681397	+	0.133333	NA	intron (NM_001130985, intron 53 of 54)	intron (NM_001130985, intron 53 of 54)	214513	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|LGMDR2|MMD1	dysferlin	protein-coding
25.8666-6	chr8	99039205	99039510	+	0.133333	NA	intron (NM_017890, intron 3 of 61)	intron (NM_017890, intron 3 of 61)	26091	NM_015243	157680	Hs.191540	NM_015243	ENSG00000132549	VPS13B	CHS1|COH1	vacuolar protein sorting 13 homolog B	protein-coding
16.9333-12	chr3	20184954	20185184	+	0.133333	NA	intron (NM_001012409, intron 1 of 7)	intron (NM_001012409, intron 1 of 7)	1137	NM_001012410	151648	Hs.105153	NM_138484	ENSG00000129810	SGO1	CAID|NY-BR-85|SGO|SGOL1	shugoshin 1	protein-coding
41.4-4	chr5	13424387	13425087	+	0.133333	NA	Intergenic	Intergenic	-391851	NR_147005	105374658		NR_147005		LINC02220	-	long intergenic non-protein coding RNA 2220	ncRNA
53.4-3	chr4	154729944	154730645	+	0.133333	NA	Intergenic	Intergenic	-10547	NM_001301645	9227	Hs.658427	NM_004744	ENSG00000121207	LRAT	LCA14	lecithin retinol acyltransferase	protein-coding
30.6333-3	chr13	94267357	94267750	+	0.133333	NA	intron (NM_005708, intron 4 of 8)	AmnSINE1|SINE|5S-Deu-L2	-79562	NR_046535	100873972	Hs.670344	NR_046535	ENSG00000236520	GPC6-AS1	-	GPC6 antisense RNA 1	ncRNA
50.8332	chr15	78542092	78542604	+	0.133333	NA	intron (NM_001102668, intron 3 of 7)	intron (NM_001102668, intron 3 of 7)	1662	NM_001330676	5685	Hs.251531	NM_002789	ENSG00000041357	PSMA4	HC9|HsT17706|PSC9	proteasome subunit alpha 4	protein-coding
26.2999	chr16	68372903	68373190	+	0.133333	NA	intron (NM_018667, intron 2 of 8)	intron (NM_018667, intron 2 of 8)	61932	NM_001290018	54496	Hs.640229	NM_019023	ENSG00000132600	PRMT7	SBIDDS	protein arginine methyltransferase 7	protein-coding
29.5-2	chr1	51383109	51383487	+	0.133333	NA	intron (NM_001159969, intron 9 of 12)	L1MB3|LINE|L1	-38182	NM_001144832	22996	Hs.112949	NM_001080494	ENSG00000085831	TTC39A	C1orf34|DEME-6	tetratricopeptide repeat domain 39A	protein-coding
36.1666-2	chr9	5049082	5049431	+	0.133333	NA	intron (NM_004972, intron 5 of 24)	intron (NM_004972, intron 5 of 24)	7563	NM_001322204	3717	Hs.656213	NM_004972	ENSG00000096968	JAK2	JTK10|THCYT3	Janus kinase 2	protein-coding
27.6999-2	chr4	2634515	2634865	+	0.133333	NA	intron (NM_001256668, intron 3 of 19)	L1MEd|LINE|L1	9258	NM_003704	8603	Hs.652364	NM_003704	ENSG00000125386	FAM193A	C4orf8|RES4-22	family with sequence similarity 193 member A	protein-coding
27.9666	chr11	85476242	85476515	+	0.133333	NA	intron (NM_001142699, intron 3 of 27)	Tigger3b|DNA|TcMar-Tigger	150892	NM_001142699	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
24-18	chr7	35619280	35619567	+	0.133333	NA	Intergenic	Intergenic	75712	NM_022373	64224	Hs.643051	NM_022373	ENSG00000122557	HERPUD2	-	HERPUD family member 2	protein-coding
15.2333-6	chr2	235809362	235809476	+	0.133333	NA	intron (NM_001037131, intron 9 of 17)	intron (NM_001037131, intron 9 of 17)	-291498	NR_146582	27321		NR_146582		TNRC17	CAGL234	trinucleotide repeat containing 17	ncRNA
20.4666-6	chr4	34404022	34404186	+	0.133333	NA	Intergenic	Intergenic	-134357	NR_147183	105374394	Hs.570782	NR_147183	ENSG00000248685	LINC02484	-	long intergenic non-protein coding RNA 2484	ncRNA
37.9333-6	chr6	45075248	45075660	+	0.133333	NA	intron (NM_001350327, intron 2 of 9)	intron (NM_001350327, intron 2 of 9)	122316	NR_030313	693171		NR_030313	ENSG00000207769	MIR586	MIRN586|hsa-mir-586	microRNA 586	ncRNA
25-10	chr5	86963092	86963425	+	0.133333	NA	Intergenic	MLT1A1|LTR|ERVL-MaLR	151696	NR_036243	100422887		NR_036243	ENSG00000265919	MIR4280	-	microRNA 4280	ncRNA
42.8666-3	chr12	133137446	133138016	+	0.133333	NA	intron (NM_015394, intron 1 of 4)	L2c|LINE|L2	7104	NM_015394	7556	Hs.573983	NM_015394	ENSG00000256223	ZNF10	KOX1	zinc finger protein 10	protein-coding
52.8666	chr15	33324995	33325485	+	0.133333	NA	intron (NM_001243996, intron 1 of 102)	intron (NM_001243996, intron 1 of 102)	14273	NM_001243996	6263	Hs.709373	NM_001036	ENSG00000198838	RYR3	RYR-3	ryanodine receptor 3	protein-coding
35.1666	chr2	233776729	233777300	+	0.133333	NA	intron (NM_001367507, intron 1 of 41)	intron (NM_001367507, intron 1 of 41)	1290	NM_001367507	339766	Hs.361778	NM_001287395	ENSG00000185038	MROH2A	HEATR7B1	maestro heat like repeat family member 2A	protein-coding
57.5332	chr1	109292404	109292980	+	0.133333	NA	intron (NM_001265613, intron 8 of 8)	intron (NM_001265613, intron 8 of 8)	-9524	NM_001350242	84722	Hs.405925	NM_032636	ENSG00000134222	PSRC1	DDA3|FP3214	proline and serine rich coiled-coil 1	protein-coding
19.1333	chr1	66636600	66636810	+	0.133333	NA	intron (NM_032291, intron 4 of 24)	intron (NM_032291, intron 4 of 24)	8265	NR_036060	100422871		NR_036060	ENSG00000264720	MIR3117	mir-3117	microRNA 3117	ncRNA
24.6-14	chr8	123552900	123553205	+	0.133333	NA	Intergenic	MLT1N2|LTR|ERVL-MaLR	-11846	NM_058229	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding
21.7-7	chr22	31531924	31532185	+	0.133333	NA	intron (NM_001007467, intron 4 of 32)	AluSx|SINE|Alu	35518	NM_001007467	9814	Hs.62209	NM_014775	ENSG00000198089	SFI1	PISD|PPP1R139|hSfi1p	SFI1 centrin binding protein	protein-coding
6.26666	chr1	106162500	106162591	+	0.133333	NA	Intergenic	LTR67B|LTR|ERVL	-134292	NR_146609	105378884	Hs.568533	NR_146609		LINC01677	-	long intergenic non-protein coding RNA 1677	ncRNA
30.7333-3	chr1	204321248	204321633	+	0.133333	NA	intron (NM_014935, intron 1 of 22)	L2c|LINE|L2	38489	NM_014935	22874	Hs.253146	NM_014935	ENSG00000143850	PLEKHA6	PEPP-3|PEPP3	pleckstrin homology domain containing A6	protein-coding
12.8666-2	chr15	67433457	67433587	+	0.133333	NA	intron (NR_040052, intron 3 of 5)	intron (NR_040052, intron 3 of 5)	87451	NR_040055	100506686	Hs.656245	NR_040051	ENSG00000259673	IQCH-AS1	-	IQCH antisense RNA 1	ncRNA
27.4666-5	chr3	134237610	134238103	+	0.133333	NA	intron (NM_001005861, intron 1 of 14)	intron (NM_001005861, intron 1 of 14)	12888	NM_002958	6259	Hs.654562	NM_002958	ENSG00000163785	RYK	D3S3195|JTK5|JTK5A|RYK1	receptor like tyrosine kinase	protein-coding
39.8332	chr2	72062431	72062743	+	0.133333	NA	Intergenic	MER72|LTR|ERV1	85275	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
27.3-6	chr4	17680785	17681262	+	0.133333	NA	intron (NM_015688, intron 7 of 17)	intron (NM_015688, intron 7 of 17)	66382	NM_025205	80306	Hs.731966	NM_025205	ENSG00000118579	MED28	1500003D12Rik|EG1|magicin	mediator complex subunit 28	protein-coding
29.7-8	chr18	42519445	42519705	+	0.133333	NA	intron (NR_046454, intron 6 of 6)	intron (NR_046454, intron 6 of 6)	332907	NR_046174	284260	Hs.652819	NR_046174	ENSG00000267586	LINC00907	-	long intergenic non-protein coding RNA 907	ncRNA
33.3666-2	chr7	96213681	96214289	+	0.133333	NA	intron (NR_027662, intron 3 of 16)	intron (NR_027662, intron 3 of 16)	5771	NR_030322	693176		NR_030322	ENSG00000208025	MIR591	MIRN591|hsa-mir-591	microRNA 591	ncRNA
43.3333-4	chr5	53019293	53019948	+	0.133333	NA	intron (NR_073107, intron 1 of 28)	AluSx|SINE|Alu	30268	NR_073104	3673	Hs.482077	NM_002203	ENSG00000164171	ITGA2	BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2	integrin subunit alpha 2	protein-coding
32.7667-3	chr14	88932082	88932544	+	0.133333	NA	Intergenic	AluSc8|SINE|Alu	107662	NR_159362	123016	Hs.303055	NM_144596	ENSG00000165533	TTC8	BBS8|RP51	tetratricopeptide repeat domain 8	protein-coding
11.6333	chr15	59083887	59084058	+	0.133333	NA	intron (NM_001270529, intron 8 of 13)	intron (NM_001270529, intron 8 of 13)	-21174	NM_004701	9133	Hs.194698	NM_004701	ENSG00000157456	CCNB2	HsT17299	cyclin B2	protein-coding
49.3999	chr20	44509600	44510165	+	0.133333	NA	intron (NM_006811, intron 5 of 9)	intron (NM_006811, intron 5 of 9)	12188	NM_006811	10955	Hs.272168	NM_006811	ENSG00000132824	SERINC3	AIGP1|DIFF33|SBBI99|TDE|TDE1|TMS-1	serine incorporator 3	protein-coding
41.4666-2	chr16	57634576	57634951	+	0.133333	NA	intron (NM_001145772, intron 1 of 14)	L3|LINE|CR1	-4729	NM_001290144	9289	Hs.513633	NM_005682	ENSG00000205336	ADGRG1	BFPP|BPPR|GPR56|TM7LN4|TM7XN1	adhesion G protein-coupled receptor G1	protein-coding
29.8	chr1	181015222	181015609	+	0.133333	NA	intron (NM_005819, intron 1 of 7)	intron (NM_005819, intron 1 of 7)	7455	NM_005819	10228	Hs.518417	NM_005819	ENSG00000135823	STX6	-	syntaxin 6	protein-coding
21.3-14	chr3	49375917	49376205	+	0.133333	NA	intron (NM_001664, intron 1 of 4)	AluSx|SINE|Alu	-17461	NM_001329455	2876	Hs.76686	NM_000581	ENSG00000233276	GPX1	GPXD|GSHPX1	glutathione peroxidase 1	protein-coding
43.2-4	chr2	48737100	48737627	+	0.133333	NA	intron (NM_000233, intron 1 of 10)	intron (NM_000233, intron 1 of 10)	18361	NM_000233	3973	Hs.468490	NM_000233	ENSG00000138039	LHCGR	HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5	luteinizing hormone/choriogonadotropin receptor	protein-coding
24.4999	chr9	80540002	80540295	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	565125	NR_121212	101927477	Hs.571630	NR_121212		LINC01507	XLOC_000303	long intergenic non-protein coding RNA 1507	ncRNA
52.0999	chr17	35508349	35508873	+	0.133333	NA	intron (NM_001363830, intron 2 of 4)	AluY|SINE|Alu	-20872	NM_001195790	100506736	Hs.447559	NM_001145027	ENSG00000205045	SLFN12L	-	schlafen family member 12 like	protein-coding
38.4-4	chr2	72652649	72653125	+	0.133333	NA	intron (NR_135774, intron 6 of 19)	AluJb|SINE|Alu	173146	NR_135774	23233	Hs.303454	NM_015189	ENSG00000144036	EXOC6B	SEC15B|SEC15L2|SEMDJL3	exocyst complex component 6B	protein-coding
34.0667	chr10	76543716	76544084	+	0.133333	NA	intron (NM_001305581, intron 6 of 6)	intron (NM_001305581, intron 6 of 6)	-344144	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA
36.0999	chr1	119970418	119970911	+	0.133333	NA	intron (NM_001200001, intron 5 of 21)	intron (NM_001200001, intron 5 of 21)	-74149	NM_021794	11085	Hs.283011	NM_021794	ENSG00000134249	ADAM30	svph4	ADAM metallopeptidase domain 30	protein-coding
57.4666-2	chr20	15936087	15936699	+	0.133333	NA	intron (NM_001351663, intron 11 of 17)	(AT)n|Simple_repeat|Simple_repeat	-13079	NR_130925	613266	Hs.309149	NR_130924		LOC613266	-	uncharacterized LOC613266	ncRNA
34.7666-2	chr3	160283280	160283610	+	0.133333	NA	intron (NM_001190242, intron 12 of 18)	intron (NM_001190242, intron 12 of 18)	57809	NM_001168214	401097	Hs.729755	NM_001168214	ENSG00000180044	C3orf80	-	chromosome 3 open reading frame 80	protein-coding
34.3666	chr21	44295224	44295795	+	0.133333	NA	intron (NM_000383, intron 12 of 13)	intron (NM_000383, intron 12 of 13)	-4544	NM_002626	5211	Hs.255093	NM_002626	ENSG00000141959	PFKL	ATP-PFK|PFK-B|PFK-L	phosphofructokinase, liver type	protein-coding
17.1666	chr12	125742608	125742771	+	0.133333	NA	Intergenic	Intergenic	120237	NM_001286219	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding
46.1332	chr14	32725915	32726285	+	0.133333	NA	intron (NM_004274, intron 9 of 13)	intron (NM_004274, intron 9 of 13)	-212779	NM_001165893	64067	Hs.657892	NM_022123	ENSG00000151322	NPAS3	MOP6|PASD6|bHLHe12	neuronal PAS domain protein 3	protein-coding
40.9333-4	chr8	67104012	67104428	+	0.133333	NA	intron (NM_001363133, intron 7 of 27)	intron (NM_001363133, intron 7 of 27)	20372	NM_001291339	79848	Hs.370147	NM_024790	ENSG00000104218	CSPP1	CSPP|JBTS21	centrosome and spindle pole associated protein 1	protein-coding
36.8999-2	chr16	72277684	72278086	+	0.133333	NA	Intergenic	L2c|LINE|L2	-105435	NM_001160213	83449	Hs.714939	NM_031293	ENSG00000118557	PMFBP1	SPGF31|STAP	polyamine modulated factor 1 binding protein 1	protein-coding
22.1333-8	chr17	60968634	60968901	+	0.133333	NA	intron (NM_001330413, intron 14 of 25)	L1MA4|LINE|L1	290916	NM_001353144	54828	Hs.655028	NM_017679	ENSG00000141376	BCAS3	GAOB1|MAAB	BCAS3 microtubule associated cell migration factor	protein-coding
17.5-2	chr10	69783281	69783452	+	0.133333	NA	Intergenic	Intergenic	-18540	NM_001368882	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding
43.3	chr1	221583367	221583900	+	0.133333	NA	Intergenic	Intergenic	153267	NR_111939	11221	Hs.497822	NM_007207	ENSG00000143507	DUSP10	MKP-5|MKP5	dual specificity phosphatase 10	protein-coding
32.4333-2	chr13	48083826	48084354	+	0.133333	NA	intron (NM_014166, intron 3 of 6)	AluSz|SINE|Alu	6953	NR_046511	100873965	Hs.616241	NR_046511	ENSG00000229111	MED4-AS1	MED4-AS	MED4 antisense RNA 1	ncRNA
17.8333-16	chr8	138803641	138803851	+	0.133333	NA	intron (NM_152888, intron 10 of 64)	intron (NM_152888, intron 10 of 64)	110295	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
22.1333-12	chr5	13465405	13465888	+	0.133333	NA	Intergenic	L1M4|LINE|L1	-432760	NR_147005	105374658		NR_147005		LINC02220	-	long intergenic non-protein coding RNA 2220	ncRNA
43.2-8	chr8	68520836	68521361	+	0.133333	NA	intron (NR_146187, intron 4 of 13)	intron (NR_146187, intron 4 of 13)	-189607	NR_038877	286189	Hs.593427	NR_038877	ENSG00000248801	C8orf34-AS1	-	C8orf34 antisense RNA 1	ncRNA
28.8666-5	chr4	67761201	67761455	+	0.133333	NA	Intergenic	LTR16A1|LTR|ERVL	-5242	NM_000406	2798	Hs.407587	NM_000406	ENSG00000109163	GNRHR	GNRHR1|GRHR|HH7|LHRHR|LRHR	gonadotropin releasing hormone receptor	protein-coding
27.1333-4	chr11	15527052	15527557	+	0.133333	NA	Intergenic	L1MA6|LINE|L1	-116581	NM_001293172	102724957	Hs.512245	NM_001293172		LOC102724957	-	uncharacterized LOC102724957	protein-coding
29.1-6	chr2	202628744	202629099	+	0.133333	NA	Intergenic	Intergenic	-6048	NM_173511	150864	Hs.471130	NM_173511	ENSG00000138439	FAM117B	ALS2CR13	family with sequence similarity 117 member B	protein-coding
30.6333-7	chr3	118926473	118926811	+	0.133333	NA	intron (NM_001353325, intron 4 of 7)	intron (NM_001353325, intron 4 of 7)	-16434	NR_046230	100506765	Hs.660823	NR_046230	ENSG00000239877	IGSF11-AS1	-	IGSF11 antisense RNA 1	ncRNA
15.6333	chr1	204011335	204011480	+	0.133333	NA	Intergenic	MLT1F2|LTR|ERVL-MaLR	29857	NR_027902	284573	Hs.406979	NR_027902	ENSG00000176754	LINC00303	C1orf157|NCRNA00303	long intergenic non-protein coding RNA 303	ncRNA
26.8-2	chr10	6846404	6846749	+	0.133333	NA	Intergenic	Charlie1a|DNA|hAT-Charlie	66978	NR_038291	100507127	Hs.498571	NR_038291	ENSG00000238266	LINC00707	-	long intergenic non-protein coding RNA 707	ncRNA
13.3666	chr18	79284426	79284526	+	0.133333	NA	intron (NR_148360, intron 14 of 31)	intron (NR_148360, intron 14 of 31)	-111454	NM_172388	4772	Hs.534074	NM_006162	ENSG00000131196	NFATC1	NF-ATC|NF-ATc1.2|NFAT2|NFATc	nuclear factor of activated T cells 1	protein-coding
21.8-15	chr7	39166823	39167121	+	0.133333	NA	intron (NM_001370959, intron 2 of 9)	intron (NM_001370959, intron 2 of 9)	-153405	NR_138047	100689074	Hs.675876	NR_138047		POU6F2-AS2	-	POU6F2 antisense RNA 2	ncRNA
20.6666-6	chr2	183348013	183348203	+	0.133333	NA	Intergenic	Intergenic	223665	NM_138285	129401	Hs.180591	NM_138285	ENSG00000163002	NUP35	MP-44|MP44|NP44|NUP53	nucleoporin 35	protein-coding
21-11	chr7	27970846	27971281	+	0.133333	NA	intron (NM_175061, intron 2 of 4)	intron (NM_175061, intron 2 of 4)	-209394	NR_034097	100128081	Hs.434307	NR_034097		JAZF1-AS1	-	JAZF1 antisense RNA 1	ncRNA
10.2-7	chr7	46148330	46148420	+	0.133333	NA	Intergenic	Intergenic	-227103	NM_001013398	3486	Hs.450230	NM_000598	ENSG00000146674	IGFBP3	BP-53|IBP3	insulin like growth factor binding protein 3	protein-coding
19.4666-3	chr8	133815497	133815666	+	0.133333	NA	Intergenic	MER2|DNA|TcMar-Tigger	-38229	NR_125422	101927798	Hs.615036	NR_125422	ENSG00000253165	LOC101927798	-	uncharacterized LOC101927798	ncRNA
50.3999-2	chr2	99721219	99721677	+	0.133333	NA	intron (NM_001025108, intron 10 of 23)	AluSc|SINE|Alu	-231431	NR_135650	51455	Hs.443077	NM_016316	ENSG00000135945	REV1	AIBP80|REV1L	REV1 DNA directed polymerase	protein-coding
19.7333-8	chr7	156143053	156143293	+	0.133333	NA	Intergenic	Intergenic	180541	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding
31.7666	chr14	20335694	20336277	+	0.133333	NA	Intergenic	MSTC|LTR|ERVL-MaLR	-2673	NM_182849	57820	Hs.107003	NM_021178	ENSG00000100814	CCNB1IP1	C14orf18|HEI10	cyclin B1 interacting protein 1	protein-coding
24.8333-3	chr16	74692697	74692907	+	0.133333	NA	intron (NM_001142497, intron 2 of 5)	MLT1I|LTR|ERVL-MaLR	8060	NM_152649	197259	Hs.119878	NM_152649	ENSG00000168404	MLKL	hMLKL	mixed lineage kinase domain like pseudokinase	protein-coding
21.2-4	chr12	5562825	5563049	+	0.133333	NA	3' UTR (NM_001364791, exon 25 of 25)	3' UTR (NM_001364791, exon 25 of 25)	68805	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding
44.8666	chr2	107516028	107516477	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-13167	NR_146968	105373537		NR_146968	ENSG00000224568	LINC01886	-	long intergenic non-protein coding RNA 1886	ncRNA
26-11	chr9	19816546	19817026	+	0.133333	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-29767	NM_020344	25769	Hs.283014	NM_020344	ENSG00000155886	SLC24A2	NCKX2	solute carrier family 24 member 2	protein-coding
36.3334-2	chr20	32749807	32750349	+	0.133333	NA	Intergenic	Intergenic	-6070	NM_001099339	149951	Hs.408427	NM_053041	ENSG00000149600	COMMD7	C20orf92|dJ1085F17.3	COMM domain containing 7	protein-coding
30-8	chr2	8669734	8670093	+	0.133333	NA	Intergenic	MLT1J2|LTR|ERVL-MaLR	11948	NR_110153	100506299	Hs.439031	NR_110153	ENSG00000235092	ID2-AS1	-	ID2 antisense RNA 1	ncRNA
54.0666	chr9	31040053	31040666	+	0.133333	NA	Intergenic	Intergenic	341131	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
29.3333-9	chr4	55424973	55425546	+	0.133333	NA	intron (NR_073070, intron 6 of 6)	intron (NR_073070, intron 6 of 6)	29302	NR_073070	55858	Hs.479766	NM_018475	ENSG00000134851	TMEM165	CDG2K|FT27|GDT1|TMPT27|TPARL	transmembrane protein 165	protein-coding
49.4-2	chr5	164135437	164136161	+	0.133333	NA	Intergenic	Intergenic	331603	NR_105064	101927835	Hs.735171	NR_105064	ENSG00000253236	LINC02143	-	long intergenic non-protein coding RNA 2143	ncRNA
25.5-2	chr2	214697571	214698085	+	0.133333	NA	Intergenic	(AGCCAA)n|Simple_repeat|Simple_repeat	111855	NM_001282548	580	Hs.591642	NM_000465	ENSG00000138376	BARD1	-	BRCA1 associated RING domain 1	protein-coding
21.2	chr1	39911179	39911341	+	0.133333	NA	Intergenic	HAL1|LINE|L1	-9343	NM_001033082	4610	Hs.437922	NM_005376	ENSG00000116990	MYCL	L-Myc|LMYC|MYCL1|bHLHe38	MYCL proto-oncogene, bHLH transcription factor	protein-coding
9.99999-3	chr8	126243901	126244049	+	0.133333	NA	Intergenic	Intergenic	-81520	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA
25.1333-6	chr13	78943838	78944192	+	0.133333	NA	Intergenic	AluJr4|SINE|Alu	-103965	NR_046869	100874126	Hs.577893	NR_046869		LINC00331	NCRNA00331	long intergenic non-protein coding RNA 331	ncRNA
15.6666	chr1	168332691	168332812	+	0.133333	NA	Intergenic	Intergenic	-42773	NR_030284	693142		NR_030284	ENSG00000207974	MIR557	MIRN557|hsa-mir-557	microRNA 557	ncRNA
11-3	chr14	27043823	27043974	+	0.133333	NA	Intergenic	Intergenic	135256	NR_036193	100423019		NR_036193	ENSG00000265165	MIR4307	-	microRNA 4307	ncRNA
33.3333-7	chr4	139505471	139505904	+	0.133333	NA	TTS (NM_030648)	TTS (NM_030648)	51082	NM_001306200	80854	Hs.480792	NM_030648	ENSG00000145391	SETD7	KMT7|SET7|SET7/9|SET9	SET domain containing 7, histone lysine methyltransferase	protein-coding
19-13	chr3	176546176	176546339	+	0.133333	NA	Intergenic	Intergenic	31154	NR_107017	102465858		NR_107017	ENSG00000283333	MIR7977	hsa-mir-7977	microRNA 7977	ncRNA
49.3999-2	chr4	57669417	57669826	+	0.133333	NA	Intergenic	Intergenic	243749	NR_125907	101928851	Hs.555072	NR_125907	ENSG00000248505	LINC02380	-	long intergenic non-protein coding RNA 2380	ncRNA
26.8-15	chr6	41890206	41890540	+	0.133333	NA	intron (NM_018561, intron 2 of 6)	AluSx1|SINE|Alu	5002	NM_018561	25862	Hs.593575	NM_018561	ENSG00000164663	USP49	-	ubiquitin specific peptidase 49	protein-coding
20.4333-5	chr3	120170544	120170733	+	0.133333	NA	intron (NM_001168271, intron 8 of 8)	intron (NM_001168271, intron 8 of 8)	73657	NM_153002	165829	Hs.333358	NM_153002	ENSG00000175697	GPR156	GABABL|PGR28	G protein-coupled receptor 156	protein-coding
27.3999-2	chr5	155471567	155471890	+	0.133333	NA	Intergenic	Intergenic	457973	NM_001099293	285643	Hs.567824	NM_001099293	ENSG00000226650	KIF4B	-	kinesin family member 4B	protein-coding
29.9666-2	chr8	129806955	129807179	+	0.133333	NA	Intergenic	MSTB-int|LTR|ERVL-MaLR	-20443	NM_031415	56169	Hs.133244	NM_031415	ENSG00000147697	GSDMC	MLZE	gasdermin C	protein-coding
26.7333-7	chr3	74363406	74363829	+	0.133333	NA	intron (NM_020872, intron 9 of 21)	intron (NM_020872, intron 9 of 21)	157523	NM_020872	5067	Hs.12723	NM_020872	ENSG00000113805	CNTN3	BIG-1|PANG|PCS	contactin 3	protein-coding
60.6332	chr9	81513063	81513636	+	0.133333	NA	Intergenic	L1ME4b|LINE|L1	176186	NM_001303103	7088	Hs.197320	NM_005077	ENSG00000196781	TLE1	ESG|ESG1|GRG1	TLE family member 1, transcriptional corepressor	protein-coding
24.4666-7	chrX	43680689	43680964	+	0.133333	NA	intron (NM_001270458, intron 2 of 15)	L1MC5|LINE|L1	25919	NM_000240	4128	Hs.183109	NM_000240	ENSG00000189221	MAOA	BRNRS|MAO-A	monoamine oxidase A	protein-coding
35-8	chr5	2678722	2679149	+	0.133333	NA	Intergenic	Intergenic	-33656	NR_145480	101234261		NR_145480	ENSG00000281560	LSINCT5	-	long stress-induced non-coding transcript 5	ncRNA
13.6333-5	chr2	86557988	86558178	+	0.133333	NA	intron (NM_001198954, intron 3 of 7)	intron (NM_001198954, intron 3 of 7)	5360	NR_036454	51652	Hs.591582	NM_016079	ENSG00000115561	CHMP3	CGI-149|NEDF|VPS24	charged multivesicular body protein 3	protein-coding
23.6-12	chr21	29445841	29446061	+	0.133333	NA	Intergenic	L1M5|LINE|L1	-50096	NR_146594	54147	Hs.124532	NR_146594	ENSG00000234293	BACH1-IT3	C21orf8|NCRNA00097	BACH1 intronic transcript 3	ncRNA
30-14	chr5	173127885	173128162	+	0.133333	NA	intron (NM_153607, intron 8 of 8)	intron (NM_153607, intron 8 of 8)	-16508	NM_013979	662	Hs.145726	NM_001205	ENSG00000113734	BNIP1	NIP1|SEC20|TRG-8	BCL2 interacting protein 1	protein-coding
16.7666-2	chr11	36559131	36559256	+	0.133333	NA	Intergenic	L1M2|LINE|L1	-8820	NM_000448	5896	Hs.73958	NM_000448	ENSG00000166349	RAG1	RAG-1|RNF74	recombination activating 1	protein-coding
34.3333	chr10	36069109	36069543	+	0.133333	NA	Intergenic	Intergenic	291024	NR_110138	102578074		NR_110138	ENSG00000280719	PCAT5	LINC01452|TPCAT-10-36067	prostate cancer associated transcript 5	ncRNA
9.6-4	chr14	78747835	78747993	+	0.133333	NA	intron (NR_073547, intron 8 of 20)	intron (NR_073547, intron 8 of 20)	344195	NM_004796	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
15.4-14	chr20	2020210	2020367	+	0.133333	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	-26003	NM_001190899	5173	Hs.22584	NM_024411	ENSG00000101327	PDYN	ADCA|PENKB|SCA23	prodynorphin	protein-coding
46.8-2	chr12	102842324	102842938	+	0.133333	NA	intron (NM_000277, intron 11 of 12)	intron (NM_000277, intron 11 of 12)	-18232	NR_033855	283432	Hs.382110	NR_033855	ENSG00000258169	LINC00485	-	long intergenic non-protein coding RNA 485	ncRNA
13.2	chr1	111727815	111727973	+	0.133333	NA	intron (NM_198926, intron 1 of 1)	intron (NM_198926, intron 1 of 1)	11501	NM_019099	55924	Hs.193406	NM_019099	ENSG00000197852	INKA2	C1orf183|FAM212B	inka box actin regulator 2	protein-coding
29.5-7	chr5	27712685	27713047	+	0.133333	NA	Intergenic	Intergenic	240574	NR_038848	643401	Hs.533212	NR_038848	ENSG00000250337	PURPL	LINC01021	p53 upregulated regulator of p53 levels	ncRNA
21.9333-14	chr3	119950251	119950496	+	0.133333	NA	intron (NM_002093, intron 2 of 11)	L2a|LINE|L2	134275	NR_162125	113839522		NR_162125		MIR6529	-	microRNA 6529	ncRNA
44.3999	chr3	101658033	101658410	+	0.133333	NA	intron (NM_014415, intron 6 of 10)	intron (NM_014415, intron 6 of 10)	-18209	NR_024407	100009676	Hs.743292	NR_024407	ENSG00000256628	ZBTB11-AS1	-	ZBTB11 antisense RNA 1	ncRNA
47.1999	chr5	75002382	75002990	+	0.133333	NA	Intergenic	L1MCa|LINE|L1	49872	NM_001366737	51301	Hs.272404	NM_016591	ENSG00000176928	GCNT4	C2GNT3|LINC01336	glucosaminyl (N-acetyl) transferase 4	protein-coding
39.5333-5	chr9	113139250	113139615	+	0.133333	NA	Intergenic	Intergenic	-11575	NM_001860	1318	Hs.24030	NM_001860	ENSG00000136867	SLC31A2	COPT2|CTR2|hCTR2	solute carrier family 31 member 2	protein-coding
49.5999-3	chr9	129289535	129290089	+	0.133333	NA	Intergenic	Intergenic	7396	NR_121587	101929331	Hs.522428	NR_121587	ENSG00000224307	LOC101929331	-	uncharacterized LOC101929331	ncRNA
28.9666	chr14	34149410	34149949	+	0.133333	NA	Intergenic	L1MC4|LINE|L1	-198605	NM_022073	112399	Hs.135507	NM_022073	ENSG00000129521	EGLN3	HIFP4H3|HIFPH3|PHD3	egl-9 family hypoxia inducible factor 3	protein-coding
10.0667-7	chr8	132042107	132042206	+	0.133333	NA	intron (NM_001080399, intron 4 of 13)	MLT1L|LTR|ERVL-MaLR	17226	NM_001080399	729330	Hs.653174	NM_001080399	ENSG00000253117	OC90	PLA2L	otoconin 90	protein-coding
22.1333-11	chr4	51863973	51864247	+	0.133333	NA	intron (NM_001040402, intron 3 of 10)	intron (NM_001040402, intron 3 of 10)	20531	NM_001287755	23142	Hs.605388	NM_015115	ENSG00000109184	DCUN1D4	-	defective in cullin neddylation 1 domain containing 4	protein-coding
54.7999-2	chr15	27765579	27766122	+	0.133333	NA	intron (NM_001300984, intron 22 of 22)	MER41B|LTR|ERV1	333465	NM_000275	4948	Hs.654411	NM_000275	ENSG00000104044	OCA2	BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1	OCA2 melanosomal transmembrane protein	protein-coding
32.1333	chr1	88055571	88055818	+	0.133333	NA	Intergenic	L2c|LINE|L2	-628450	NM_001320707	5586	Hs.440833	NM_006256	ENSG00000065243	PKN2	PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7	protein kinase N2	protein-coding
41.9666-4	chr5	155477483	155478125	+	0.133333	NA	Intergenic	L2a|LINE|L2	464049	NM_001099293	285643	Hs.567824	NM_001099293	ENSG00000226650	KIF4B	-	kinesin family member 4B	protein-coding
25.2667-10	chr3	57804624	57804944	+	0.133333	NA	intron (NM_001304420, intron 1 of 21)	intron (NM_001304420, intron 1 of 21)	47528	NM_007159	7871	Hs.476432	NM_007159	ENSG00000163681	SLMAP	SLAP	sarcolemma associated protein	protein-coding
16.9333-7	chr13	23505018	23505219	+	0.133333	NA	Intergenic	Intergenic	35606	NR_038995	100506697	Hs.50118	NR_038995	ENSG00000232977	LINC00327	NCRNA00327	long intergenic non-protein coding RNA 327	ncRNA
27.8333	chr1	111962550	111962797	+	0.133333	NA	intron (NM_172198, intron 2 of 6)	intron (NM_172198, intron 2 of 6)	26482	NM_004980	3752	Hs.666367	NM_004980	ENSG00000171385	KCND3	BRGDA9|KCND3L|KCND3S|KSHIVB|KV4.3|SCA19|SCA22	potassium voltage-gated channel subfamily D member 3	protein-coding
23.8666-2	chr15	62501103	62501588	+	0.133333	NA	Intergenic	Intergenic	143836	NR_026897	197003	Hs.352253	NM_152648	ENSG00000259458	MGC15885	-	uncharacterized protein MGC15885	ncRNA
12.3	chr11	84397910	84398023	+	0.133333	NA	intron (NM_001142699, intron 7 of 27)	intron (NM_001142699, intron 7 of 27)	-80627	NM_001206769	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
24.1667-5	chr7	45245399	45245795	+	0.133333	NA	Intergenic	Intergenic	87806	NM_005856	10268	Hs.25691	NM_005856	ENSG00000122679	RAMP3	-	receptor activity modifying protein 3	protein-coding
44.9666	chr18	79118483	79119175	+	0.133333	NA	intron (NR_148360, intron 4 of 31)	AluJb|SINE|Alu	49435	NR_148360	374868	Hs.465475	NM_198531	ENSG00000166377	ATP9B	ATPASEP|ATPIIB|HUSSY-20|NEO1L|hMMR1	ATPase phospholipid transporting 9B (putative)	protein-coding
23.3666-3	chr7	46057039	46057366	+	0.133333	NA	Intergenic	Charlie1b|DNA|hAT-Charlie	-135930	NM_001013398	3486	Hs.450230	NM_000598	ENSG00000146674	IGFBP3	BP-53|IBP3	insulin like growth factor binding protein 3	protein-coding
44.9999-2	chrX	104574325	104574942	+	0.133333	NA	intron (NM_017416, intron 1 of 10)	L1ME4a|LINE|L1	8434	NM_017416	26280	Hs.675519	NM_017416	ENSG00000189108	IL1RAPL2	IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1	interleukin 1 receptor accessory protein like 2	protein-coding
23.3-13	chr7	26432231	26432659	+	0.133333	NA	intron (NR_148500, intron 2 of 5)	intron (NR_148500, intron 2 of 5)	-33027	NR_136272	105375304	Hs.735352	NR_136270	ENSG00000225792	LOC105375304	-	uncharacterized LOC105375304	ncRNA
15.5666-2	chr17	33479910	33480115	+	0.133333	NA	intron (NM_001094, intron 1 of 9)	L2|LINE|L2	53748	NR_037584	100506677	Hs.652571	NR_037584	ENSG00000265544	AA06	AA02|AA04|AA05	uncharacterized LOC100506677	pseudo
34.3333-2	chr10	52835622	52835910	+	0.133333	NA	Intergenic	L1MA4|LINE|L1	-64066	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
27.7333-13	chrX	65478329	65478703	+	0.133333	NA	Intergenic	L1MA6|LINE|L1	-10219	NM_001010888	340554	Hs.21249	NM_001010888	ENSG00000102053	ZC3H12B	CXorf32|MCPIP2	zinc finger CCCH-type containing 12B	protein-coding
14.1333-7	chr14	67551321	67551449	+	0.133333	NA	intron (NM_020715, intron 2 of 28)	MIR|SINE|MIR	-17535	NM_001348546	161145	Hs.509707	NM_182526	ENSG00000198133	TMEM229B	C14orf83	transmembrane protein 229B	protein-coding
35.8666-6	chr2	54025467	54025794	+	0.133333	NA	intron (NM_001320587, intron 2 of 5)	L1PB1|LINE|L1	54517	NM_001320586	98	Hs.516173	NM_138448	ENSG00000170634	ACYP2	ACYM|ACYP	acylphosphatase 2	protein-coding
21.4-3	chr10	51873303	51873489	+	0.133333	NA	intron (NM_001098512, intron 4 of 17)	intron (NM_001098512, intron 4 of 17)	-173801	NM_015235	23283	Hs.591358	NM_015235	ENSG00000177613	CSTF2T	CstF-64T	cleavage stimulation factor subunit 2 tau variant	protein-coding
16.3	chr10	81069450	81069617	+	0.133333	NA	Intergenic	Intergenic	419736	NR_155749	105378386	Hs.531456	NR_155749		LINC02655	-	long intergenic non-protein coding RNA 2655	ncRNA
26.1333-7	chr4	53710239	53710458	+	0.133333	NA	intron (NR_125918, intron 1 of 2)	AluSz6|SINE|Alu	14447	NR_125918	100506444	Hs.636176	NR_125918	ENSG00000249341	LOC100506444	-	uncharacterized LOC100506444	ncRNA
35.5333-13	chr9	98396566	98397076	+	0.133333	NA	intron (NM_005458, intron 8 of 18)	intron (NM_005458, intron 8 of 18)	-141172	NR_051978	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding
43.1333-4	chr14	70154755	70155261	+	0.133333	NA	intron (NM_033262, intron 2 of 7)	AluSx3|SINE|Alu	-32100	NR_135825	646548		NR_135825		LOC646548	-	ADAM metallopeptidase domain 20 pseudogene	pseudo
38.9666-2	chr5	35751554	35752007	+	0.133333	NA	intron (NM_024867, intron 23 of 36)	MIR|SINE|MIR	-105111	NM_002185	3575	Hs.591742	NM_002185	ENSG00000168685	IL7R	CD127|CDW127|IL-7R-alpha|IL7RA|ILRA	interleukin 7 receptor	protein-coding
30.6-3	chr14	77168904	77169281	+	0.133333	NA	Intergenic	L1MB7|LINE|L1	-12706	NM_020431	57156	Hs.22452	NM_020431	ENSG00000165548	TMEM63C	C14orf171|CSC1|hsCSC1	transmembrane protein 63C	protein-coding
40.6-6	chr4	106493300	106493806	+	0.133333	NA	Intergenic	Intergenic	59929	NR_147150	105377355	Hs.253188	NR_147150	ENSG00000249613	LINC02173	-	long intergenic non-protein coding RNA 2173	ncRNA
16.5333-8	chr6	3451880	3452083	+	0.133333	NA	intron (NM_015482, intron 1 of 9)	MER47A|DNA|TcMar-Tigger	-3722	NR_147844	643327	Hs.631820	NR_147844		LOC643327	-	uncharacterized LOC643327	ncRNA
20.7667-13	chr7	31900799	31901049	+	0.133333	NA	intron (NM_001322059, intron 3 of 17)	L1M3|LINE|L1	169483	NM_001191057	5137	Hs.143821	NM_005020	ENSG00000154678	PDE1C	DFNA74|Hcam3|cam-PDE 1C|hCam-3	phosphodiesterase 1C	protein-coding
48.7332-2	chr5	28606109	28606535	+	0.133333	NA	Intergenic	Intergenic	-318657	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
38.8667-3	chr9	70193903	70194422	+	0.133333	NA	intron (NM_153267, intron 11 of 13)	MIRc|SINE|MIR	-18274	NR_040076	100507244	Hs.556816	NR_040076	ENSG00000204706	MAMDC2-AS1	-	MAMDC2 antisense RNA 1	ncRNA
21.3333-4	chr3	99877602	99878025	+	0.133333	NA	intron (NM_001042459, intron 4 of 4)	intron (NM_001042459, intron 4 of 4)	-1610	NM_014890	11259	Hs.104672	NM_014890	ENSG00000168386	FILIP1L	DOC-1|DOC1|GIP130|GIP90	filamin A interacting protein 1 like	protein-coding
20.0333-13	chr6	144297056	144297313	+	0.133333	NA	intron (NM_007124, intron 1 of 73)	intron (NM_007124, intron 1 of 73)	5447	NM_007124	7402	Hs.133135	NM_007124	ENSG00000152818	UTRN	DMDL|DRP|DRP1	utrophin	protein-coding
53.6666	chr3	127155170	127155635	+	0.133333	NA	Intergenic	(TGTGTG)n|Simple_repeat|Simple_repeat	-37729	NM_001007534	285311	Hs.591284	NM_001007534	ENSG00000214324	C3orf56	-	chromosome 3 open reading frame 56	protein-coding
30.7-8	chr3	171521726	171522075	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-61492	NR_027767	23043	Hs.34024	NM_015028	ENSG00000154310	TNIK	MRT54	TRAF2 and NCK interacting kinase	protein-coding
29.9333-9	chr2	174472548	174472950	+	0.133333	NA	intron (NM_001267051, intron 3 of 14)	intron (NM_001267051, intron 3 of 14)	14280	NM_152529	151556	Hs.516604	NM_152529	ENSG00000163328	GPR155	DEP.7|DEPDC3|PGR22	G protein-coupled receptor 155	protein-coding
16.1333-10	chr2	106613567	106613743	+	0.133333	NA	Intergenic	L1ME3Cz|LINE|L1	126291	NM_001349727	927	Hs.534308	NM_001349727	ENSG00000232001	CD8B2	CD8BP	CD8b2 molecule	protein-coding
9.6-6	chr22	33042098	33042229	+	0.133333	NA	intron (NM_003490, intron 1 of 13)	MLT1A|LTR|ERVL-MaLR	10381	NM_001369908	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding
25-2	chr10	4618694	4618942	+	0.133333	NA	Intergenic	Intergenic	-37338	NR_015425	338588	Hs.121365	NR_015425		LINC00705	-	long intergenic non-protein coding RNA 705	ncRNA
12.3333-13	chr7	89403190	89403319	+	0.133333	NA	Intergenic	L1PA13|LINE|L1	-607517	NM_152706	219557	Hs.112877	NM_152706	ENSG00000164645	TEX47	C7orf62	testis expressed 47	protein-coding
17.7-4	chr13	78896140	78896373	+	0.133333	NA	Intergenic	L4_A_Mam|LINE|RTE-X	-56206	NR_046869	100874126	Hs.577893	NR_046869		LINC00331	NCRNA00331	long intergenic non-protein coding RNA 331	ncRNA
28.4333-6	chr8	130606120	130606639	+	0.133333	NA	Intergenic	Intergenic	-162705	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	protein-coding
51.7333-4	chr3	40684952	40685580	+	0.133333	NA	Intergenic	HAL1|LINE|L1	160306	NM_001098414	285268	Hs.19977	NM_198484	ENSG00000172888	ZNF621	-	zinc finger protein 621	protein-coding
32.8999-2	chr22	19151610	19152095	+	0.133333	NA	Intergenic	Intergenic	-1569	NM_005315	2928	Hs.534318	NM_005315	ENSG00000063515	GSC2	GSCL	goosecoid homeobox 2	protein-coding
31.4-4	chr14	71549401	71549790	+	0.133333	NA	intron (NM_001354289, intron 5 of 23)	intron (NM_001354289, intron 5 of 23)	-36703	NM_001284246	26037	Hs.654657	NM_015556	ENSG00000197555	SIPA1L1	E6TP1|SPAR1	signal induced proliferation associated 1 like 1	protein-coding
32.4666-6	chrX	51548777	51549186	+	0.133333	NA	Intergenic	L1ME1|LINE|L1	-41540	NR_110654	102723426	Hs.584513	NR_110654		LINC01496	-	long intergenic non-protein coding RNA 1496	ncRNA
35-2	chr11	32759847	32760256	+	0.133333	NA	intron (NM_001008391, intron 2 of 17)	intron (NM_001008391, intron 2 of 17)	34607	NM_001008391	493860	Hs.706808	NM_001008391	ENSG00000186714	CCDC73	NY-SAR-79	coiled-coil domain containing 73	protein-coding
12.3333-10	chr3	161481017	161481151	+	0.133333	NA	Intergenic	Intergenic	-15724	NM_001080440	131149	Hs.585021	NM_001080440	ENSG00000182447	OTOL1	C1QTNF15|C1QTNF16	otolin 1	protein-coding
31.2-13	chr3	36499247	36499627	+	0.133333	NA	intron (NM_001292049, intron 4 of 8)	L1MEd|LINE|L1	118950	NM_003149	6769	Hs.56045	NM_003149	ENSG00000144681	STAC	STAC1	SH3 and cysteine rich domain	protein-coding
17.5333-3	chr10	92677886	92678060	+	0.133333	NA	Intergenic	L1PA15|LINE|L1	-11982	NM_002729	3087	Hs.118651	NM_002729	ENSG00000152804	HHEX	HEX|HMPH|HOX11L-PEN|PRH|PRHX	hematopoietically expressed homeobox	protein-coding
28.6-5	chr15	58439160	58439714	+	0.133333	NA	intron (NR_120338, intron 2 of 2)	MER5A|DNA|hAT-Charlie	7446	NM_000236	3990	Hs.654472	NM_000236	ENSG00000166035	LIPC	HDLCQ12|HL|HTGL|LIPH	lipase C, hepatic type	protein-coding
40.8-8	chr6	92395267	92395844	+	0.133333	NA	Intergenic	L1MC3|LINE|L1	-705127	NR_104154	101929083	Hs.586238	NR_104154		CASC6	-	cancer susceptibility 6	ncRNA
32.4-4	chr19	30229371	30229673	+	0.133333	NA	Intergenic	Intergenic	-142862	NM_001352260	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding
49.3333-2	chr11	76544186	76544680	+	0.133333	NA	exon (NM_001300943, exon 19 of 21)	exon (NM_001300943, exon 19 of 21)	99408	NM_020193	56946	Hs.352588	NM_020193	ENSG00000158636	EMSY	C11orf30|GL002	EMSY transcriptional repressor, BRCA2 interacting	protein-coding
28.4-4	chr16	63752400	63752954	+	0.133333	NA	Intergenic	HERV35I-int|LTR|ERV1	1369386	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
51.7333-2	chr10	72649321	72650167	+	0.133333	NA	Intergenic	Intergenic	-23553	NM_006077	10367	Hs.524367	NM_006077	ENSG00000107745	MICU1	CALC|CBARA1|EFHA3|MPXPS|ara CALC	mitochondrial calcium uptake 1	protein-coding
42.2666-5	chr5	57505853	57506265	+	0.133333	NA	Intergenic	Intergenic	-23248	NM_001017992	345651	Hs.482167	NM_001017992	ENSG00000169067	ACTBL2	ACT	actin beta like 2	protein-coding
28.2333-8	chr4	30775006	30775321	+	0.133333	NA	intron (NM_032457, intron 1 of 2)	intron (NM_032457, intron 1 of 2)	54794	NM_032456	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
40.1999-4	chr8	14016101	14016471	+	0.133333	NA	Intergenic	L1PA13|LINE|L1	386596	NR_134450	102725080	Hs.130621	NR_134450		LOC102725080	-	uncharacterized LOC102725080	ncRNA
40.6666-7	chr7	97179888	97180261	+	0.133333	NA	intron (NM_020186, intron 1 of 1)	intron (NM_020186, intron 1 of 1)	63481	NM_020186	57001	Hs.592269	NM_020186	ENSG00000196636	SDHAF3	ACN9|DC11|LYRM10|Sdh7	succinate dehydrogenase complex assembly factor 3	protein-coding
45.2333-2	chr7	96884892	96885297	+	0.133333	NA	Intergenic	L1ME3E|LINE|L1	-120459	NM_005222	1750	Hs.249196	NM_005222	ENSG00000006377	DLX6	-	distal-less homeobox 6	protein-coding
38.7333-9	chr5	51863152	51863846	+	0.133333	NA	Intergenic	Intergenic	-144532	NR_147166	105378960	Hs.639310	NR_147166	ENSG00000248789	LINC02118	-	long intergenic non-protein coding RNA 2118	ncRNA
35.4666-2	chr1	117856158	117856618	+	0.133333	NA	Intergenic	Intergenic	73233	NM_001135589	54834	Hs.310809	NM_017686	ENSG00000196505	GDAP2	MACROD3|SCAR27	ganglioside induced differentiation associated protein 2	protein-coding
9.79998	chr14	87333693	87333818	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	321539	NR_146551	105370611	Hs.691123	NR_146551	ENSG00000258770	LINC02330	-	long intergenic non-protein coding RNA 2330	ncRNA
23.7333-8	chr6	120795720	120796024	+	0.133333	NA	Intergenic	L1MB1|LINE|L1	538608	NM_152730	221322	Hs.121396	NM_152730	ENSG00000146350	TBC1D32	BROMI|C6orf170|C6orf171	TBC1 domain family member 32	protein-coding
32.5333-4	chr18	3210994	3211385	+	0.133333	NA	intron (NM_019856, intron 2 of 36)	intron (NM_019856, intron 2 of 36)	8779	NM_019856	8736	Hs.464469	NM_003803	ENSG00000101605	MYOM1	SKELEMIN	myomesin 1	protein-coding
28.8	chr1	911792	912179	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	7707	NR_122045	100130417	Hs.200644	NM_175912	ENSG00000223764	LINC02593	-	long intergenic non-protein coding RNA 2593	ncRNA
34.5666	chr1	22089071	22089540	+	0.133333	NA	intron (NM_001039802, intron 6 of 6)	intron (NM_001039802, intron 6 of 6)	36596	NM_044472	998	Hs.467637	NM_001791	ENSG00000070831	CDC42	CDC42Hs|G25K|TKS	cell division cycle 42	protein-coding
21.8667-6	chr2	38808982	38809295	+	0.133333	NA	intron (NM_001329963, intron 21 of 23)	AluJr|SINE|Alu	30928	NM_024775	79833	Hs.143818	NM_024775	ENSG00000152147	GEMIN6	-	gem nuclear organelle associated protein 6	protein-coding
25.5-7	chr7	55015473	55015782	+	0.133333	NA	Intergenic	Intergenic	-3390	NM_001346941	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding
33.8333-6	chr17	48923839	48924232	+	0.133333	NA	intron (NM_023079, intron 6 of 6)	AluSz|SINE|Alu	-15052	NR_135674	105371814	Hs.655254	NR_135674	ENSG00000248278	LOC105371814	-	uncharacterized LOC105371814	ncRNA
27.9-8	chr7	53433966	53434496	+	0.133333	NA	Intergenic	Intergenic	377700	NR_038371	401337	Hs.531378	NM_001001707	ENSG00000205628	LINC01446	GS1-179L18.1	long intergenic non-protein coding RNA 1446	ncRNA
12.2-5	chr2	22546137	22546256	+	0.133333	NA	Intergenic	L3|LINE|CR1	9717	NR_110577	102723362	Hs.502887	NR_110577	ENSG00000233587	LINC01884	-	long intergenic non-protein coding RNA 1884	ncRNA
43.4333-3	chr14	58260268	58260680	+	0.133333	NA	intron (NM_152132, intron 5 of 10)	intron (NM_152132, intron 5 of 10)	15631	NM_002788	5684	Hs.558799	NM_002788	ENSG00000100567	PSMA3	HC8|PSC3	proteasome subunit alpha 3	protein-coding
18.1666-4	chr6	17764741	17764979	+	0.133333	NA	exon (NM_022113, exon 39 of 39)	exon (NM_022113, exon 39 of 39)	57817	NR_134618	105374952	Hs.718703	NR_134616	ENSG00000272269	LOC105374952	-	uncharacterized LOC105374952	ncRNA
31.2999-4	chr8	112405619	112406026	+	0.133333	NA	intron (NM_001363185, intron 31 of 66)	intron (NM_001363185, intron 31 of 66)	-237671	NR_031745	100302225		NR_031745	ENSG00000238399	MIR2053	hsa-mir-2053	microRNA 2053	ncRNA
42.2666-6	chr7	105153711	105154371	+	0.133333	NA	intron (NM_182692, intron 7 of 15)	intron (NM_182692, intron 7 of 15)	115036	NM_001350745	6733	Hs.285197	NM_182691	ENSG00000135250	SRPK2	SFRSK2	SRSF protein kinase 2	protein-coding
33.1999-2	chr8	62358440	62358916	+	0.133333	NA	intron (NM_001304533, intron 1 of 6)	intron (NM_001304533, intron 1 of 6)	109824	NR_130764	286183	Hs.654662	NM_173688	ENSG00000185942	NKAIN3	FAM77D	sodium/potassium transporting ATPase interacting 3	protein-coding
14.5333-2	chr11	17903447	17903572	+	0.133333	NA	intron (NR_104041, intron 8 of 9)	intron (NR_104041, intron 8 of 9)	109538	NR_104040	26297	Hs.32470	NM_012139	ENSG00000129158	SERGEF	DELGEF|Gnefr	secretion regulating guanine nucleotide exchange factor	protein-coding
47.6333	chr17	16139225	16139976	+	0.133333	NA	intron (NM_001190440, intron 10 of 44)	intron (NM_001190440, intron 10 of 44)	13596	NR_145787	109623477		NR_145787		SNORD163	-	small nucleolar RNA, C/D box 163	snoRNA
32.1333-6	chr4	66657946	66658349	+	0.133333	NA	Intergenic	Intergenic	381323	NR_031673	100302177		NR_031673	ENSG00000221563	MIR1269A	MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a	microRNA 1269a	ncRNA
40	chr1	62466965	62467542	+	0.133333	NA	intron (NM_001367561, intron 48 of 49)	Tigger2|DNA|TcMar-Tigger	30204	NM_003368	7398	Hs.35086	NM_003368	ENSG00000162607	USP1	UBP	ubiquitin specific peptidase 1	protein-coding
27.1333-3	chr10	98406323	98406625	+	0.133333	NA	intron (NM_032709, intron 4 of 15)	intron (NM_032709, intron 4 of 15)	8708	NM_032709	84795	Hs.238303	NM_032709	ENSG00000119943	PYROXD2	C10orf33|FP3420|YUEF	pyridine nucleotide-disulphide oxidoreductase domain 2	protein-coding
9.16665	chr7	93420667	93420760	+	0.133333	NA	Intergenic	Intergenic	62142	NR_030388	724023		NR_030388	ENSG00000208014	MIR653	MIRN653|hsa-mir-653|mir-653	microRNA 653	ncRNA
24.0666-4	chr8	75922152	75922416	+	0.133333	NA	Intergenic	Intergenic	382316	NM_004133	3174	Hs.241529	NM_004133	ENSG00000164749	HNF4G	NR2A2|NR2A3	hepatocyte nuclear factor 4 gamma	protein-coding
29.4-12	chr6	56714664	56714985	+	0.133333	NA	intron (NM_001144770, intron 3 of 94)	L2a|LINE|L2	-71935	NM_001723	667	Hs.604915	NM_001723	ENSG00000151914	DST	BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2	dystonin	protein-coding
23.9999-2	chr15	63923823	63924113	+	0.133333	NA	intron (NM_001363730, intron 9 of 9)	AluJo|SINE|Alu	-4306	NR_120344	101928988	Hs.673214	NR_120344	ENSG00000259351	LOC101928988	-	uncharacterized LOC101928988	ncRNA
18.8-7	chr2	49398532	49398795	+	0.133333	NA	Intergenic	Intergenic	-244136	NM_000145	2492	Hs.1428	NM_000145	ENSG00000170820	FSHR	FSHR1|FSHRO|LGR1|ODG1	follicle stimulating hormone receptor	protein-coding
75.3332	chr2	77541949	77542659	+	0.133333	NA	Intergenic	Intergenic	-19871	NM_001282924	80059	Hs.285782	NM_024993	ENSG00000176204	LRRTM4	-	leucine rich repeat transmembrane neuronal 4	protein-coding
27.7999	chr4	98138296	98138549	+	0.133333	NA	intron (NM_174952, intron 1 of 10)	L2c|LINE|L2	5054	NM_174952	285555	Hs.680226	NM_174952	ENSG00000163116	STPG2	C4orf37	sperm tail PG-rich repeat containing 2	protein-coding
16.9333-2	chr10	88417475	88417676	+	0.133333	NA	intron (NM_018363, intron 4 of 6)	intron (NM_018363, intron 4 of 6)	165743	NM_001031709	55328	Hs.149849	NM_018363	ENSG00000184719	RNLS	C10orf59|RENALASE	renalase, FAD dependent amine oxidase	protein-coding
29.1666-2	chr3	22331642	22331993	+	0.133333	NA	Intergenic	Intergenic	374678	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
44.4333-2	chr6	121765362	121766032	+	0.133333	NA	Intergenic	MER57F|LTR|ERV1	330051	NM_000165	2697	Hs.74471	NM_000165	ENSG00000152661	GJA1	AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA	gap junction protein alpha 1	protein-coding
33.5666-4	chr8	61702511	61702914	+	0.133333	NA	intron (NM_001164755, intron 1 of 12)	L1M5|LINE|L1	11880	NM_001164755	444	Hs.332422	NM_004318	ENSG00000198363	ASPH	AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin	aspartate beta-hydroxylase	protein-coding
13.6-5	chr6	51555915	51556065	+	0.133333	NA	Intergenic	Intergenic	-65880	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
35.6-10	chr3	142129293	142129776	+	0.133333	NA	intron (NM_001178139, intron 1 of 12)	L1MB3|LINE|L1	20010	NM_001178139	7029	Hs.379018	NM_006286	ENSG00000114126	TFDP2	DP2	transcription factor Dp-2	protein-coding
29.7666-4	chr9	107688154	107688377	+	0.133333	NA	Intergenic	Intergenic	-198496	NM_004235	9314	Hs.376206	NM_004235	ENSG00000136826	KLF4	EZF|GKLF	Kruppel like factor 4	protein-coding
20.9666-5	chrX	154860814	154861010	+	0.133333	NA	intron (NM_019863, intron 3 of 4)	AluSx1|SINE|Alu	-24057	NM_001017991	474381	Hs.534498	NM_001017991	ENSG00000277858	H2AFB2	H2A.Bbd	H2A histone family member B2	protein-coding
28.2-2	chr1	216609129	216609537	+	0.133333	NA	intron (NM_001243505, intron 3 of 6)	intron (NM_001243505, intron 3 of 6)	114096	NM_001243518	2104	Hs.444225	NM_001438	ENSG00000196482	ESRRG	ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3	estrogen related receptor gamma	protein-coding
12.5333-2	chr5	114948592	114948750	+	0.133333	NA	Intergenic	Intergenic	-175258	NR_130785	101927078	Hs.160027	NR_130785		LOC101927078	-	uncharacterized LOC101927078	ncRNA
21.1333-4	chr10	129349770	129349951	+	0.133333	NA	Intergenic	Intergenic	-117381	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding
23.6667-12	chr8	114488059	114488412	+	0.133333	NA	Intergenic	L1PB2|LINE|L1	-1051296	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
17.8666	chr2	205824157	205824303	+	0.133333	NA	Intergenic	L1MB5|LINE|L1	141729	NM_201266	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding
24.5667-9	chr20	6936987	6937424	+	0.133333	NA	Intergenic	MLT1G1|LTR|ERVL-MaLR	169519	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A|SSFSC	bone morphogenetic protein 2	protein-coding
21.2666-2	chr2	180104195	180104434	+	0.133333	NA	Intergenic	AluSq2|SINE|Alu	-97017	NM_020943	57703	Hs.311363	NM_020943	ENSG00000163510	CWC22	EIF4GL|NCM|fSAPb	CWC22 spliceosome associated protein homolog	protein-coding
15.7333-15	chr6	89006424	89006575	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	-42881	NM_001286426	8732	Hs.567378	NM_003800	ENSG00000111880	RNGTT	CAP1A|HCE|HCE1|hCAP	RNA guanylyltransferase and 5'-phosphatase	protein-coding
28.6333-6	chr2	56936319	56936912	+	0.133333	NA	Intergenic	Intergenic	-750845	NR_125368	100129434	Hs.580330	NR_125368		LOC100129434	-	uncharacterized LOC100129434	ncRNA
40.6666-2	chr2	161099888	161100552	+	0.133333	NA	Intergenic	Intergenic	-36735	NM_133484	10010	Hs.132257	NM_004180	ENSG00000136560	TANK	I-TRAF|ITRAF|TRAF2	TRAF family member associated NFKB activator	protein-coding
32.3999-4	chr4	11501845	11502152	+	0.133333	NA	Intergenic	L2c|LINE|L2	-73104	NM_005114	9957	Hs.507348	NM_005114	ENSG00000002587	HS3ST1	3OST|3OST1	heparan sulfate-glucosamine 3-sulfotransferase 1	protein-coding
23.3	chr1	22204071	22204284	+	0.133333	NA	Intergenic	Intergenic	-61080	NM_030761	54361	Hs.25766	NM_030761	ENSG00000162552	WNT4	SERKAL|WNT-4	Wnt family member 4	protein-coding
30.5	chr1	40067746	40068205	+	0.133333	NA	intron (NM_001350484, intron 9 of 13)	intron (NM_001350484, intron 9 of 13)	27124	NM_001350481	10487	Hs.370581	NM_006367	ENSG00000131236	CAP1	CAP|CAP1-PEN	cyclase associated actin cytoskeleton regulatory protein 1	protein-coding
49.3666	chr21	17596037	17596620	+	0.133333	NA	intron (NM_001130914, intron 5 of 5)	L1ME4b|LINE|L1	-15358	NR_149073	110806272	Hs.607138	NR_149073	ENSG00000280594	BTG3-AS1	ASBEL	BTG3 antisense RNA 1	ncRNA
29.5667-7	chr20	62506545	62507061	+	0.133333	NA	Intergenic	MIR1_Amn|SINE|MIR	-30808	NM_080473	140628	Hs.352250	NM_080473	ENSG00000130700	GATA5	CHTD5|GATAS|bB379O24.1	GATA binding protein 5	protein-coding
25.1666-3	chr4	116868823	116869253	+	0.133333	NA	Intergenic	LTR37-int|LTR|ERV1	216538	NM_152402	133022	Hs.570737	NM_152402	ENSG00000174599	TRAM1L1	-	translocation associated membrane protein 1 like 1	protein-coding
31.7666-4	chr4	148849049	148849314	+	0.133333	NA	Intergenic	Intergenic	93197	NR_134681	105377480	Hs.148699	NR_134681	ENSG00000249317	LOC105377480	-	uncharacterized LOC105377480	ncRNA
49.0333	chr9	93958294	93958912	+	0.133333	NA	TTS (NR_144455)	TTS (NR_144455)	2769	NR_144455	101928040	Hs.375820	NR_144455	ENSG00000235601	BARX1-DT	BARX1-AS1	BARX1 divergent transcript	ncRNA
33.5666-2	chr12	79038459	79038845	+	0.133333	NA	intron (NM_001291901, intron 2 of 9)	intron (NM_001291901, intron 2 of 9)	-7040	NM_001135806	6857	Hs.310545	NM_005639	ENSG00000067715	SYT1	BAGOS|P65|SVP65|SYT	synaptotagmin 1	protein-coding
34.0666-4	chr5	29913038	29913606	+	0.133333	NA	Intergenic	L1PA13|LINE|L1	32762	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
35.5667	chr10	98422480	98423134	+	0.133333	NA	intron (NM_001322476, intron 16 of 19)	Tigger12c|DNA|TcMar-Tigger	-7625	NM_032709	84795	Hs.238303	NM_032709	ENSG00000119943	PYROXD2	C10orf33|FP3420|YUEF	pyridine nucleotide-disulphide oxidoreductase domain 2	protein-coding
15.6333-12	chr20	20828802	20829023	+	0.133333	NA	Intergenic	THE1D|LTR|ERVL-MaLR	-116268	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding
29.7333-17	chr9	5920838	5921178	+	0.133333	NA	exon (NM_001017969, exon 8 of 8)	exon (NM_001017969, exon 8 of 8)	30119	NM_005511	2315	Hs.154069	NM_005511	ENSG00000120215	MLANA	MART-1|MART1	melan-A	protein-coding
19.7-13	chr6	153348646	153349019	+	0.133333	NA	Intergenic	Intergenic	-217550	NM_012419	26575	Hs.166313	NM_012419	ENSG00000091844	RGS17	RGS-17|RGSZ2|hRGS17	regulator of G protein signaling 17	protein-coding
19.8666-6	chr8	34437575	34437755	+	0.133333	NA	Intergenic	L1PBa|LINE|L1	-346256	NR_125746	103689844	Hs.590682	NR_125746	ENSG00000254344	LINC01288	TCONS_00014671	long intergenic non-protein coding RNA 1288	ncRNA
29.6333-4	chr2	216069973	216070409	+	0.133333	NA	intron (NM_018441, intron 1 of 7)	L1MA7|LINE|L1	11618	NM_018441	55825	Hs.281680	NM_018441	ENSG00000115425	PECR	DCRRP|HPDHASE|HSA250303|PVIARL|SDR29C1|TERP	peroxisomal trans-2-enoyl-CoA reductase	protein-coding
12.6667-4	chr21	29287501	29287647	+	0.133333	NA	intron (NR_027072, intron 1 of 1)	intron (NR_027072, intron 1 of 1)	-11348	NM_001186	571	Hs.154276	NM_001186	ENSG00000156273	BACH1	BACH-1|BTBD24	BTB domain and CNC homolog 1	protein-coding
30.1333-9	chr5	94073443	94073860	+	0.133333	NA	intron (NM_001163418, intron 1 of 8)	intron (NM_001163418, intron 1 of 8)	38012	NM_032042	83989	Hs.600086	NM_032042	ENSG00000113391	FAM172A	C5orf21|Toupee	family with sequence similarity 172 member A	protein-coding
47.1333-3	chr12	112687172	112687844	+	0.133333	NA	intron (NM_001347952, intron 1 of 21)	MLT1J|LTR|ERVL-MaLR	7668	NR_031631	100302227		NR_031631	ENSG00000283507	MIR1302-1	MIRN1302-1|hsa-mir-1302-1	microRNA 1302-1	ncRNA
48.4666-3	chr9	105163007	105163453	+	0.133333	NA	Intergenic	Intergenic	-81375	NM_001330731	23446	Hs.573495	NM_022109	ENSG00000070214	SLC44A1	CD92|CDW92|CHTL1|CTL1	solute carrier family 44 member 1	protein-coding
24.1333-5	chr18	803701	803975	+	0.133333	NA	intron (NM_005433, intron 1 of 11)	intron (NM_005433, intron 1 of 11)	8404	NM_005433	7525	Hs.194148	NM_005433	ENSG00000176105	YES1	HsT441|P61-YES|Yes|c-yes	YES proto-oncogene 1, Src family tyrosine kinase	protein-coding
33.9	chr10	11645179	11645755	+	0.133333	NA	Intergenic	L1ME1|LINE|L1	-33678	NR_125732	9712	Hs.498661	NM_014688	ENSG00000148429	USP6NL	RNTRE|TRE2NL|USP6NL-IT1	USP6 N-terminal like	protein-coding
7.03332	chr1	29417118	29417170	+	0.133333	NA	Intergenic	Intergenic	-67030	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA
27.5666-4	chr3	124498240	124498514	+	0.133333	NA	intron (NM_001024660, intron 33 of 59)	L2b|LINE|L2	-86281	NM_001322995	8997	Hs.8004	NM_003947	ENSG00000160145	KALRN	ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD	kalirin RhoGEF kinase	protein-coding
31.5999	chr2	12044637	12044874	+	0.133333	NA	intron (NR_110196, intron 2 of 5)	intron (NR_110196, intron 2 of 5)	37639	NR_110198	100506457	Hs.197824	NR_110196	ENSG00000224184	MIR3681HG	-	MIR3681 host gene	ncRNA
18.6-3	chr10	78410525	78410690	+	0.133333	NA	Intergenic	Intergenic	143265	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA
23.5333-11	chr3	71580821	71581199	+	0.133333	NA	intron (NR_146142, intron 2 of 19)	intron (NR_146142, intron 2 of 19)	2718	NM_001349338	27086	Hs.59368	NM_032682	ENSG00000114861	FOXP1	12CC4|HSPC215|MFH|QRF1|hFKH1B	forkhead box P1	protein-coding
59.3666	chr11	78328566	78329320	+	0.133333	NA	intron (NM_080491, intron 1 of 9)	L1ME2z|LINE|L1	12937	NM_012296	9846	Hs.429434	NM_012296	ENSG00000033327	GAB2	-	GRB2 associated binding protein 2	protein-coding
19.1333-7	chr4	112302842	112303031	+	0.133333	NA	intron (NM_001102406, intron 1 of 15)	L2a|LINE|L2	5567	NM_001102406	80216	Hs.652825	NM_025144	ENSG00000073331	ALPK1	8430410J10Rik|LAK	alpha kinase 1	protein-coding
30.0333-3	chr15	27028843	27029473	+	0.133333	NA	intron (NM_001270873, intron 3 of 5)	intron (NM_001270873, intron 3 of 5)	57977	NM_001270873	2567	Hs.569475	NM_033223	ENSG00000182256	GABRG3	-	gamma-aminobutyric acid type A receptor gamma3 subunit	protein-coding
16.4666-2	chr5	98041001	98041190	+	0.133333	NA	Intergenic	L1PA15|LINE|L1	120144	NR_146477	105379098	Hs.566306	NR_146477		LINC01846	-	long intergenic non-protein coding RNA 1846	ncRNA
32.9333-4	chr16	82780624	82780942	+	0.133333	NA	intron (NR_110938, intron 1 of 2)	intron (NR_110938, intron 1 of 2)	7464	NR_110938	101928446	Hs.684007	NR_110938	ENSG00000260862	LOC101928446	-	uncharacterized LOC101928446	ncRNA
31.6667-3	chr1	239049831	239050240	+	0.133333	NA	Intergenic	Intergenic	-336533	NM_001347716	1131	Hs.7138	NM_000740	ENSG00000133019	CHRM3	EGBRS|HM3|PBS	cholinergic receptor muscarinic 3	protein-coding
34.7333-4	chr3	177540366	177540965	+	0.133333	NA	intron (NR_047568, intron 2 of 3)	intron (NR_047568, intron 2 of 3)	98744	NR_047568	100505566	Hs.581170	NR_047568		LINC00578	-	long intergenic non-protein coding RNA 578	ncRNA
27.8666-3	chr20	24291442	24292019	+	0.133333	NA	Intergenic	L1PA17|LINE|L1	91963	NR_040102	400839	Hs.651965	NR_040102	ENSG00000230133	LINC01721	-	long intergenic non-protein coding RNA 1721	ncRNA
18.9333-16	chr7	89695568	89695803	+	0.133333	NA	Intergenic	L1MA1|LINE|L1	-423715	NR_003551	442523	Hs.406964	NR_003551	ENSG00000235436	DPY19L2P4	-	DPY19L2 pseudogene 4	pseudo
12.3333-8	chr20	54789084	54789258	+	0.133333	NA	Intergenic	L1PREC2|LINE|L1	313578	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
16.3333-11	chr7	42345322	42345539	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-108221	NM_000168	2737	Hs.21509	NM_000168	ENSG00000106571	GLI3	ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV	GLI family zinc finger 3	protein-coding
29.6333	chr10	77196403	77196637	+	0.133333	NA	intron (NM_001271519, intron 3 of 28)	intron (NM_001271519, intron 3 of 28)	55689	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA
19.5666-2	chr19	28555366	28555655	+	0.133333	NA	intron (NR_110759, intron 5 of 9)	intron (NR_110759, intron 5 of 9)	-51178	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA
30.5333-7	chr4	82376471	82376751	+	0.133333	NA	Intergenic	Intergenic	-2615	NM_001003810	3184	Hs.480073	NM_002138	ENSG00000138668	HNRNPD	AUF1|AUF1A|HNRPD|P37|hnRNPD0	heterogeneous nuclear ribonucleoprotein D	protein-coding
18.5333	chr1	163163532	163163745	+	0.133333	NA	intron (NR_110699, intron 2 of 3)	intron (NR_110699, intron 2 of 3)	1963	NR_110699	101928404	Hs.683933	NR_110699	ENSG00000232892	LOC101928404	-	uncharacterized LOC101928404	ncRNA
53.6333	chr9	32067588	32068239	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-316690	NM_001278352	48	Hs.567229	NM_002197	ENSG00000122729	ACO1	ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1	aconitase 1	protein-coding
21.4666	chr1	245096641	245096843	+	0.133333	NA	intron (NM_001143943, intron 6 of 6)	intron (NM_001143943, intron 6 of 6)	-58243	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding
22.7666-4	chr16	10312908	10313275	+	0.133333	NA	Intergenic	AluJo|SINE|Alu	-72970	NM_001352120	80063	Hs.513343	NM_024997	ENSG00000166669	ATF7IP2	MCAF2	activating transcription factor 7 interacting protein 2	protein-coding
41.7333	chr11	76546023	76546449	+	0.133333	NA	exon (NM_001300943, exon 20 of 21)	exon (NM_001300943, exon 20 of 21)	101211	NM_020193	56946	Hs.352588	NM_020193	ENSG00000158636	EMSY	C11orf30|GL002	EMSY transcriptional repressor, BRCA2 interacting	protein-coding
25.3333-8	chr2	124482464	124482723	+	0.133333	NA	intron (NM_001367498, intron 7 of 23)	intron (NM_001367498, intron 7 of 23)	457306	NM_001367498	129684	Hs.660653	NM_130773	ENSG00000155052	CNTNAP5	caspr5	contactin associated protein like 5	protein-coding
35	chr1	78621272	78621655	+	0.133333	NA	intron (NM_006820, intron 1 of 8)	AluSz|SINE|Alu	1015	NM_006820	10964	Hs.744918	NM_006820	ENSG00000137959	IFI44L	C1orf29|GS3686	interferon induced protein 44 like	protein-coding
37.0667-7	chr9	85727333	85727826	+	0.133333	NA	intron (NM_015239, intron 1 of 25)	Charlie6|DNA|hAT-Charlie	14450	NM_001286715	23287	Hs.719980	NM_015239	ENSG00000135049	AGTPBP1	CCP1|CONDCA|NNA1	ATP/GTP binding protein 1	protein-coding
23.9333-16	chr9	138050306	138050837	+	0.133333	NA	intron (NM_001243812, intron 24 of 45)	intron (NM_001243812, intron 24 of 45)	-5500	NR_121582	101928786	Hs.678847	NR_121582		LOC101928786	-	uncharacterized LOC101928786	ncRNA
13.1666-2	chr5	7200981	7201106	+	0.133333	NA	Intergenic	AluSx3|SINE|Alu	68311	NR_039659	100616234		NR_039659	ENSG00000283468	MIR4454	-	microRNA 4454	ncRNA
18.2-8	chr16	5682441	5682665	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	50086	NR_107032	102465867		NR_107032	ENSG00000273648	MIR8065	hsa-mir-8065	microRNA 8065	ncRNA
25.1333-9	chr2	32056216	32056511	+	0.133333	NA	Intergenic	FLAM_A|SINE|Alu	-7248	NM_001363875	6683	Hs.468091	NM_014946	ENSG00000021574	SPAST	ADPSP|FSP2|SPG4	spastin	protein-coding
45.2-2	chr2	96192841	96193362	+	0.133333	NA	exon (NM_020151, exon 5 of 8)	exon (NM_020151, exon 5 of 8)	-15315	NR_046322	285033	Hs.58648	NM_001037228		STARD7-AS1	-	STARD7 antisense RNA 1	ncRNA
23.7333-5	chr3	74053430	74053643	+	0.133333	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	244292	NR_146637	105377165		NR_146637		LINC02005	-	long intergenic non-protein coding RNA 2005	ncRNA
25.7666	chr1	57841151	57841605	+	0.133333	NA	intron (NM_001353980, intron 3 of 5)	THE1D-int|LTR|ERVL-MaLR	-19203	NR_104362	101926890	Hs.662207	NR_104362	ENSG00000226759	DAB1-AS1	-	DAB1 antisense RNA 1	ncRNA
26.4666-2	chr2	36491149	36491762	+	0.133333	NA	intron (NM_016441, intron 7 of 16)	intron (NM_016441, intron 7 of 16)	106713	NM_001042548	9637	Hs.258563	NM_005102	ENSG00000171055	FEZ2	HUM3CL	fasciculation and elongation protein zeta 2	protein-coding
28.1666-5	chr2	125772021	125772418	+	0.133333	NA	Intergenic	Intergenic	345766	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
26.7333-15	chr7	68372315	68372629	+	0.133333	NA	Intergenic	Intergenic	352219	NR_120514	102723427	Hs.583491	NR_120514	ENSG00000225209	LOC102723427	-	uncharacterized LOC102723427	ncRNA
22.2666-5	chr6	74527500	74527888	+	0.133333	NA	intron (NR_110856, intron 2 of 3)	L1M1|LINE|L1	458243	NR_110856	101928516	Hs.384600	NR_110856	ENSG00000223786	LOC101928516	-	uncharacterized LOC101928516	ncRNA
44.1333-2	chr2	67036711	67037483	+	0.133333	NA	Intergenic	AluSq2|SINE|Alu	-49349	NR_110564	102800447	Hs.144196	NR_110564		LINC01828	-	long intergenic non-protein coding RNA 1828	ncRNA
32.7999-2	chr11	77256272	77256560	+	0.133333	NA	intron (NM_182833, intron 11 of 16)	intron (NM_182833, intron 11 of 16)	45250	NM_182833	220032	Hs.249795	NM_182833	ENSG00000178795	GDPD4	GDE6	glycerophosphodiester phosphodiesterase domain containing 4	protein-coding
18.4666-3	chr15	89970887	89971065	+	0.133333	NA	Intergenic	Intergenic	-30348	NM_198526	374655	Hs.459311	NM_198526	ENSG00000140548	ZNF710	-	zinc finger protein 710	protein-coding
17.2667-5	chr11	29089127	29089346	+	0.133333	NA	Intergenic	Intergenic	-505177	NR_149107	105376606	Hs.577275	NR_149106	ENSG00000255117	LINC02546	-	long intergenic non-protein coding RNA 2546	ncRNA
50.4332	chr3	71739752	71740250	+	0.133333	NA	intron (NM_173359, intron 1 of 7)	L1MEc|LINE|L1	-10883	NM_001134650	317649	Hs.581355	NM_173359	ENSG00000163412	EIF4E3	eIF-4E3|eIF4E-3	eukaryotic translation initiation factor 4E family member 3	protein-coding
10.1666	chr2	60966108	60966229	+	0.133333	NA	intron (NM_144709, intron 6 of 17)	intron (NM_144709, intron 6 of 17)	51044	NM_001322124	150962	Hs.368348	NM_144709	ENSG00000162927	PUS10	CCDC139|DOBI	pseudouridine synthase 10	protein-coding
17.6-3	chr14	62712099	62712379	+	0.133333	NA	intron (NM_172375, intron 9 of 9)	intron (NM_172375, intron 9 of 9)	333219	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
25.3-8	chr2	75488447	75488974	+	0.133333	NA	Intergenic	L2c|LINE|L2	-35358	NR_110281	101927884	Hs.671110	NR_110281	ENSG00000231172	LOC101927884	-	uncharacterized LOC101927884	ncRNA
22.5666	chr22	32228231	32228523	+	0.133333	NA	intron (NM_014227, intron 11 of 14)	AluSq2|SINE|Alu	23262	NR_149072	110806273	Hs.382171	NR_149072	ENSG00000242082	SLC5A4-AS1	-	SLC5A4 antisense RNA 1	ncRNA
31.3666-2	chr21	21359136	21359426	+	0.133333	NA	intron (NM_001352592, intron 9 of 18)	intron (NM_001352592, intron 9 of 18)	212119	NM_001352597	4685	Hs.473450	NM_004540	ENSG00000154654	NCAM2	NCAM21	neural cell adhesion molecule 2	protein-coding
42.9667-3	chr2	49045989	49046452	+	0.133333	NA	intron (NM_000145, intron 2 of 9)	intron (NM_000145, intron 2 of 9)	-13383	NR_107011	102465854		NR_107011	ENSG00000212036	MIR548BA	hsa-mir-548ba	microRNA 548ba	ncRNA
35.8666	chr1	44569320	44569677	+	0.133333	NA	intron (NM_001319957, intron 1 of 13)	intron (NM_001319957, intron 1 of 13)	24005	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA
37.5333-5	chr2	219769010	219769481	+	0.133333	NA	Intergenic	Intergenic	135644	NR_146975	105373889	Hs.570066	NR_146975	ENSG00000228909	LINC01803	-	long intergenic non-protein coding RNA 1803	ncRNA
25.1666	chr15	88786454	88786762	+	0.133333	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-16828	NM_001369268	176	Hs.2159	NM_001135	ENSG00000157766	ACAN	AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD	aggrecan	protein-coding
24.0666-2	chr10	6332010	6332256	+	0.133333	NA	intron (NR_040079, intron 5 of 5)	AluSz|SINE|Alu	5589	NR_040079	399715		NR_040079	ENSG00000215244	LINC02649	-	long intergenic non-protein coding RNA 2649	ncRNA
19.0667	chr1	194536323	194536586	+	0.133333	NA	Intergenic	L1MC3|LINE|L1	1231709	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
40.3-2	chr11	23549038	23549679	+	0.133333	NA	Intergenic	L1MDa|LINE|L1	-130168	NR_107021	102465860		NR_107021	ENSG00000275868	MIR8054	hsa-mir-8054	microRNA 8054	ncRNA
29.0333-3	chr17	59106461	59106980	+	0.133333	NA	non-coding (NR_148347, exon 1 of 23)	non-coding (NR_148347, exon 1 of 23)	160	NM_001005207	4591	Hs.579079	NM_015294	ENSG00000108395	TRIM37	MUL|POB1|TEF3	tripartite motif containing 37	protein-coding
23.4667-3	chr16	79454032	79454371	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	146536	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding
33.3333-10	chr8	81863596	81863904	+	0.133333	NA	Intergenic	L1PA16|LINE|L1	-21464	NM_022133	64089	Hs.492121	NM_022133	ENSG00000104497	SNX16	-	sorting nexin 16	protein-coding
48.5333-2	chr12	49873027	49873593	+	0.133333	NA	intron (NM_012306, intron 11 of 11)	MIRc|SINE|MIR	-30204	NM_181708	144233	Hs.142736	NM_181708	ENSG00000186666	BCDIN3D	-	BCDIN3 domain containing RNA methyltransferase	protein-coding
11.8333-5	chr20	50007923	50008023	+	0.133333	NA	Intergenic	Intergenic	24993	NM_005985	6615	Hs.48029	NM_005985	ENSG00000124216	SNAI1	SLUGH2|SNA|SNAH|SNAIL|SNAIL1|dJ710H13.1	snail family transcriptional repressor 1	protein-coding
28.9-2	chr11	22675612	22676163	+	0.133333	NA	intron (NM_005256, intron 1 of 6)	MIRb|SINE|MIR	1113	NM_005256	2620	Hs.711297	NM_005256	ENSG00000148935	GAS2	GAS-2	growth arrest specific 2	protein-coding
28.8666-4	chr13	94656502	94656991	+	0.133333	NA	Intergenic	Tigger4|DNA|TcMar-Tigger	51740	NR_120417	101927248		NR_120417		LOC101927248	-	uncharacterized LOC101927248	ncRNA
23.4-2	chr3	23376822	23377090	+	0.133333	NA	intron (NM_001370225, intron 3 of 5)	intron (NM_001370225, intron 3 of 5)	173629	NM_152653	7325	Hs.475688	NM_152653	ENSG00000182247	UBE2E2	UBCH8	ubiquitin conjugating enzyme E2 E2	protein-coding
32.9666-7	chr6	13825111	13825616	+	0.133333	NA	Intergenic	Intergenic	-10803	NM_001031713	63933	Hs.214043	NM_022102	ENSG00000050393	MCUR1	C6orf79|CCDC90A|FMP32	mitochondrial calcium uniporter regulator 1	protein-coding
19.0333-5	chr14	71670283	71670449	+	0.133333	NA	intron (NM_001354286, intron 11 of 24)	intron (NM_001354286, intron 11 of 24)	84068	NM_001284246	26037	Hs.654657	NM_015556	ENSG00000197555	SIPA1L1	E6TP1|SPAR1	signal induced proliferation associated 1 like 1	protein-coding
30.8-5	chr2	82017766	82018169	+	0.133333	NA	Intergenic	L1MB8|LINE|L1	-551021	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
14.5666	chr16	62934324	62934535	+	0.133333	NA	Intergenic	Intergenic	-897991	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
7.56665	chr14	39059083	39059152	+	0.133333	NA	intron (NM_006364, intron 13 of 19)	intron (NM_006364, intron 13 of 19)	-44023	NR_146545	105370458		NR_146545	ENSG00000258651	SEC23A-AS1	-	SEC23A antisense RNA 1	ncRNA
40.1333-11	chr8	105848931	105849511	+	0.133333	NA	intron (NR_125796, intron 2 of 7)	L1PB1|LINE|L1	211282	NR_125796	102723356	Hs.571413	NR_125796		ZFPM2-AS1	SCAT3	ZFPM2 antisense RNA 1	ncRNA
30.3333-8	chr7	51089289	51089722	+	0.133333	NA	intron (NM_015198, intron 6 of 12)	AluSx1|SINE|Alu	227304	NM_001287438	23242	Hs.99141	NM_015198	ENSG00000106078	COBL	-	cordon-bleu WH2 repeat protein	protein-coding
13.5333-18	chr5	77190066	77190247	+	0.133333	NA	intron (NM_001349752, intron 1 of 21)	intron (NM_001349752, intron 1 of 21)	9852	NM_001349750	8622	Hs.584830	NM_003719	ENSG00000113231	PDE8B	ADSD|PPNAD3	phosphodiesterase 8B	protein-coding
23.7	chr1	112000018	112000276	+	0.133333	NA	Intergenic	Intergenic	9611	NR_145438	643355	Hs.279714	NR_145438	ENSG00000231437	LINC01750	-	long intergenic non-protein coding RNA 1750	ncRNA
17.7-13	chr5	6940914	6941122	+	0.133333	NA	Intergenic	Intergenic	-113097	NR_036242	100422999		NR_036242	ENSG00000283420	MIR4278	-	microRNA 4278	ncRNA
13.3333-13	chr4	106765517	106765686	+	0.133333	NA	Intergenic	Intergenic	270712	NM_014421	27123	Hs.211869	NM_014421	ENSG00000155011	DKK2	DKK-2	dickkopf WNT signaling pathway inhibitor 2	protein-coding
42.7999	chr18	78688707	78689148	+	0.133333	NA	Intergenic	Intergenic	-291348	NM_171999	27164	Hs.700557	NM_171999	ENSG00000256463	SALL3	ZNF796	spalt like transcription factor 3	protein-coding
6.66666	chr17	59267356	59267423	+	0.133333	NA	intron (NM_182569, intron 7 of 9)	intron (NM_182569, intron 7 of 9)	46878	NM_001165993	284161	Hs.631744	NM_182569	ENSG00000153982	GDPD1	GDE4	glycerophosphodiester phosphodiesterase domain containing 1	protein-coding
18.5666	chr12	100417625	100417815	+	0.133333	NA	intron (NM_001145288, intron 9 of 10)	intron (NM_001145288, intron 9 of 10)	-56146	NM_001206979	9971	Hs.282735	NM_005123	ENSG00000012504	NR1H4	BAR|FXR|HRR-1|HRR1|PFIC5|RIP14	nuclear receptor subfamily 1 group H member 4	protein-coding
9.63331	chr11	84022608	84022705	+	0.133333	NA	intron (NM_001142699, intron 11 of 27)	intron (NM_001142699, intron 11 of 27)	250624	NM_001142700	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
36.0666-3	chr3	64198617	64198919	+	0.133333	NA	non-coding (NR_046702, exon 4 of 4)	non-coding (NR_046702, exon 4 of 4)	11224	NR_046702	100874243	Hs.670840	NR_046702	ENSG00000226017	PRICKLE2-AS3	-	PRICKLE2 antisense RNA 3	ncRNA
40.1666-3	chr5	82457455	82457908	+	0.133333	NA	Intergenic	L1ME4a|LINE|L1	178219	NM_001017971	92270	Hs.676227	NM_001017971	ENSG00000205464	ATP6AP1L	-	ATPase H+ transporting accessory protein 1 like	protein-coding
27.3666	chr14	64459385	64459753	+	0.133333	NA	intron (NM_005956, intron 27 of 27)	intron (NM_005956, intron 27 of 27)	-5930	NM_004857	9495	Hs.656683	NM_004857	ENSG00000179841	AKAP5	AKAP75|AKAP79|H21	A-kinase anchoring protein 5	protein-coding
49.6665	chr11	74968831	74969203	+	0.133333	NA	intron (NM_014752, intron 3 of 4)	MIRb|SINE|MIR	-19627	NM_001367860	10825	Hs.191074	NM_006656	ENSG00000162139	NEU3	SIAL3	neuraminidase 3	protein-coding
34.7333-2	chr1	94213126	94213558	+	0.133333	NA	intron (NM_001328665, intron 2 of 21)	AluY|SINE|Alu	24242	NM_001328666	9411	Hs.483238	NM_004815	ENSG00000137962	ARHGAP29	PARG1	Rho GTPase activating protein 29	protein-coding
38.4666	chr1	188008198	188008722	+	0.133333	NA	Intergenic	Intergenic	564832	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
22.2-7	chr18	65540006	65540215	+	0.133333	NA	Intergenic	Intergenic	-210142	NM_033646	1005	Hs.541003	NM_004361	ENSG00000081138	CDH7	CDH7L1	cadherin 7	protein-coding
20.2333-8	chr5	21238490	21238715	+	0.133333	NA	Intergenic	Intergenic	-220878	NR_027027	728411	Hs.88181	NM_207331	ENSG00000183666	GUSBP1	-	GUSB pseudogene 1	pseudo
27.9333	chr1	13967060	13967327	+	0.133333	NA	Intergenic	L1MC4a|LINE|L1	217778	NM_001007257	7799	Hs.371823	NM_012231	ENSG00000116731	PRDM2	HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2	PR/SET domain 2	protein-coding
36.5	chr1	113303432	113304034	+	0.133333	NA	Intergenic	L1MB7|LINE|L1	-86782	NM_001142782	260425	Hs.486189	NM_020965	ENSG00000081026	MAGI3	MAGI-3|dJ730K3.2	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
53.9333-4	chr6	130313293	130314064	+	0.133333	NA	intron (NM_001258275, intron 1 of 13)	HAL1|LINE|L1	52190	NM_001258275	154075	Hs.440508	NM_152552	ENSG00000164483	SAMD3	-	sterile alpha motif domain containing 3	protein-coding
15.0667-13	chr5	131055650	131055852	+	0.133333	NA	Intergenic	L1MA9|LINE|L1	109505	NM_005340	3094	Hs.483305	NM_005340	ENSG00000169567	HINT1	HINT|NMAN|PKCI-1|PRKCNH1	histidine triad nucleotide binding protein 1	protein-coding
35.7333-2	chr10	94233042	94233411	+	0.133333	NA	intron (NM_001165979, intron 4 of 31)	intron (NM_001165979, intron 4 of 31)	53844	NR_033969	100128054	Hs.677562	NR_033969	ENSG00000268894	PLCE1-AS1	-	PLCE1 antisense RNA 1	ncRNA
21.8666-3	chr5	178432963	178433401	+	0.133333	NA	intron (NM_173465, intron 2 of 28)	MER21C|LTR|ERVL	157211	NM_173465	91522	Hs.660026	NM_173465	ENSG00000050767	COL23A1	-	collagen type XXIII alpha 1 chain	protein-coding
17.7667	chr10	52089415	52089785	+	0.133333	NA	intron (NM_001098512, intron 7 of 17)	L1MC4a|LINE|L1	224528	NR_038277	100506939	Hs.584791	NR_038277		PRKG1-AS1	-	PRKG1 antisense RNA 1	ncRNA
45.8667-5	chr4	78484794	78485425	+	0.133333	NA	intron (NM_025074, intron 58 of 73)	MIRb|SINE|MIR	-66661	NM_005139	306	Hs.480042	NM_005139	ENSG00000138772	ANXA3	ANX3	annexin A3	protein-coding
29.3333-2	chr12	115142466	115142846	+	0.133333	NA	Intergenic	Intergenic	-458481	NM_016569	6926	Hs.744016	NM_005996	ENSG00000135111	TBX3	TBX3-ISO|UMS|XHL	T-box transcription factor 3	protein-coding
17.9333-8	chr2	226139260	226139481	+	0.133333	NA	Intergenic	Intergenic	-3424	NR_046102	646736	Hs.712836	NR_046102		LOC646736	-	uncharacterized LOC646736	ncRNA
44.4666	chr11	90519134	90519540	+	0.133333	NA	intron (NR_104190, intron 1 of 6)	intron (NR_104190, intron 1 of 6)	36520	NR_039711	100616186		NR_039711	ENSG00000266703	MIR4490	-	microRNA 4490	ncRNA
44.6666-4	chr4	33692166	33692695	+	0.133333	NA	Intergenic	Intergenic	347463	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
29.2667-4	chr16	58816169	58816538	+	0.133333	NA	Intergenic	Intergenic	-82037	NM_001286220	2806	Hs.599470	NM_002080	ENSG00000125166	GOT2	KAT4|KATIV|KYAT4|mitAAT	glutamic-oxaloacetic transaminase 2	protein-coding
39.9999	chr6	47877480	47877897	+	0.133333	NA	TTS (NM_001013732)	TTS (NM_001013732)	90620	NR_033806	221391	Hs.213717	NM_181744	ENSG00000124818	OPN5	GPR136|GRP136|PGR12|TMEM13	opsin 5	protein-coding
43.2666-2	chr2	17920585	17921078	+	0.133333	NA	intron (NM_002252, intron 2 of 2)	intron (NM_002252, intron 2 of 2)	42164	NM_002252	3790	Hs.414489	NM_002252	ENSG00000170745	KCNS3	KV9.3	potassium voltage-gated channel modifier subfamily S member 3	protein-coding
36.9999	chr12	125964287	125964612	+	0.133333	NA	intron (NR_034132, intron 3 of 5)	intron (NR_034132, intron 3 of 5)	18925	NR_034132	400084	Hs.156191	NR_034132	ENSG00000249267	LINC00939	-	long intergenic non-protein coding RNA 939	ncRNA
34.0333-7	chr7	53833427	53833711	+	0.133333	NA	Intergenic	L1MB2|LINE|L1	-21638	NR_038371	401337	Hs.531378	NM_001001707	ENSG00000205628	LINC01446	GS1-179L18.1	long intergenic non-protein coding RNA 1446	ncRNA
30.3999-3	chr15	91537840	91538138	+	0.133333	NA	Intergenic	Intergenic	74650	NR_110106	101926928	Hs.638788	NR_110106	ENSG00000258551	CRAT37	-	cervical cancer-associated transcript 37	ncRNA
27.8666-2	chr18	23556265	23556574	+	0.133333	NA	exon (NM_000271, exon 8 of 25)	exon (NM_000271, exon 8 of 25)	30087	NM_000271	4864	Hs.464779	NM_000271	ENSG00000141458	NPC1	NPC|POGZ|SLC65A1	NPC intracellular cholesterol transporter 1	protein-coding
25.3	chr1	147093041	147093437	+	0.133333	NA	Intergenic	Intergenic	-8483	NR_121645	101447996		NR_121645	ENSG00000286172	RNVU1-8	RNU1-145|vU1.8	RNA, variant U1 small nuclear 8	snRNA
28.8999-3	chr2	20887313	20887721	+	0.133333	NA	Intergenic	L1PA16|LINE|L1	-64387	NM_001282719	60526	Hs.187823	NM_021925	ENSG00000118961	LDAH	C2orf43|hLDAH	lipid droplet associated hydrolase	protein-coding
39.7999-2	chr7	75813973	75814446	+	0.133333	NA	promoter-TSS (NM_002991)	promoter-TSS (NM_002991)	-403	NM_002991	6369	Hs.247838	NM_002991	ENSG00000106178	CCL24	Ckb-6|MPIF-2|MPIF2|SCYA24	C-C motif chemokine ligand 24	protein-coding
15.4666-2	chr5	66902926	66903185	+	0.133333	NA	intron (NM_001164664, intron 4 of 28)	L1ME3C|LINE|L1	-56018	NM_001290226	375449	Hs.595458	NM_015183	ENSG00000069020	MAST4	-	microtubule associated serine/threonine kinase family member 4	protein-coding
10.9333-5	chr13	60686536	60686624	+	0.133333	NA	intron (NR_047003, intron 2 of 4)	intron (NR_047003, intron 2 of 4)	13625	NR_047003	101926930	Hs.578045	NR_047003		LINC00378	-	long intergenic non-protein coding RNA 378	ncRNA
41.5333-4	chr15	79778812	79779175	+	0.133333	NA	Intergenic	Intergenic	118004	NR_037654	10588	Hs.194294	NM_006441	ENSG00000136371	MTHFS	HsT19268|NEDMEHM	methenyltetrahydrofolate synthetase	protein-coding
46.3999-2	chr4	30757392	30757871	+	0.133333	NA	intron (NM_032457, intron 1 of 2)	L2b|LINE|L2	37262	NM_032456	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
39.7666	chr14	81648060	81648640	+	0.133333	NA	Intergenic	L2a|LINE|L2	-25289	NR_110074	101928559	Hs.525499	NR_110074	ENSG00000258977	LINC01467	-	long intergenic non-protein coding RNA 1467	ncRNA
35.7	chr11	20015912	20016314	+	0.133333	NA	intron (NM_182964, intron 11 of 37)	MIRb|SINE|MIR	-6443	NM_001111019	89797	Hs.64341	NM_145117	ENSG00000166833	NAV2	HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2	neuron navigator 2	protein-coding
12.8333-8	chr3	63442787	63442984	+	0.133333	NA	promoter-TSS (NM_144642)	promoter-TSS (NM_144642)	-427	NM_144642	132204	Hs.648668	NM_144642	ENSG00000163630	SYNPR	SPO	synaptoporin	protein-coding
36.3999	chr1	199459949	199460402	+	0.133333	NA	Intergenic	FLAM_A|SINE|Alu	311577	NR_147896	400800	Hs.369324	NR_147896	ENSG00000231718	LINC02789	-	long intergenic non-protein coding RNA 2789	ncRNA
35.7333-7	chr3	185960597	185961111	+	0.133333	NA	intron (NR_151491, intron 1 of 3)	L2a|LINE|L2	911	NR_151491	344887	Hs.128803	NR_033752	ENSG00000171658	NMRAL2P	NMRAL1P1	NmrA like redox sensor 2, pseudogene	pseudo
23.5-14	chr4	122186601	122186879	+	0.133333	NA	intron (NM_015312, intron 5 of 83)	MER58A|DNA|hAT-Charlie	16137	NM_015312	84162	Hs.408142	NM_015312	ENSG00000138688	KIAA1109	ALKKUCS|FSA|Tweek	KIAA1109	protein-coding
32-13	chr8	138884870	138885204	+	0.133333	NA	intron (NM_152888, intron 1 of 64)	(CA)n|Simple_repeat|Simple_repeat	29004	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
15.0667	chr10	5483268	5483439	+	0.133333	NA	Intergenic	AluSz6|SINE|Alu	16217	NM_017422	51806	Hs.180142	NM_017422	ENSG00000178372	CALML5	CLSP	calmodulin like 5	protein-coding
8.89998	chr6	75523678	75523744	+	0.133333	NA	Intergenic	Intergenic	-29911	NM_015687	27145	Hs.201488	NM_015687	ENSG00000118407	FILIP1	FILIP	filamin A interacting protein 1	protein-coding
41.1999-2	chr1	214330140	214330501	+	0.133333	NA	intron (NM_020197, intron 8 of 11)	intron (NM_020197, intron 8 of 11)	49161	NM_020197	56950	Hs.66170	NM_020197	ENSG00000143499	SMYD2	HSKM-B|KMT3C|ZMYND14	SET and MYND domain containing 2	protein-coding
14.6-15	chr8	103530036	103530222	+	0.133333	NA	intron (NM_001348497, intron 1 of 22)	L1MEg|LINE|L1	-28219	NR_145698	105375690		NR_145697		LOC105375690	-	uncharacterized LOC105375690	ncRNA
8.39998	chr4	32202978	32203041	+	0.133333	NA	Intergenic	L1MB8|LINE|L1	-148029	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
34.9666	chr6	14420058	14420336	+	0.133333	NA	Intergenic	Intergenic	-134743	NR_108096	102216342	Hs.563409	NR_108096	ENSG00000226673	LINC01108	LncRNA-ES1	long intergenic non-protein coding RNA 1108	ncRNA
24.5667-7	chr17	56885098	56885355	+	0.133333	NA	promoter-TSS (NR_027025)	promoter-TSS (NR_027025)	-313	NR_027025	246754	Hs.720736	NR_027025		MTVR2	-	mouse mammary tumor virus receptor homolog 2	pseudo
41.4-2	chr16	77546129	77546685	+	0.133333	NA	Intergenic	L3|LINE|CR1	-111373	NM_199355	170692	Hs.188746	NM_139054	ENSG00000140873	ADAMTS18	ADAMTS21|KNO2|MMCAT	ADAM metallopeptidase with thrombospondin type 1 motif 18	protein-coding
31.7333-6	chr5	44424410	44424818	+	0.133333	NA	Intergenic	AluSq2|SINE|Alu	-35194	NM_004465	2255	Hs.248049	NM_004465	ENSG00000070193	FGF10	-	fibroblast growth factor 10	protein-coding
19.3333-10	chr3	168314737	168314986	+	0.133333	NA	intron (NR_021485, intron 3 of 15)	intron (NR_021485, intron 3 of 15)	65339	NR_021485	93556	Hs.478158	NR_021485		EGFEM1P	C3orf50|NCRNA00259	EGF like and EMI domain containing 1, pseudogene	pseudo
30.2667-10	chr9	100466553	100466967	+	0.133333	NA	intron (NM_001198812, intron 1 of 9)	AluJr4|SINE|Alu	-6389	NM_003692	8577	Hs.598100	NM_003692	ENSG00000241697	TMEFF1	C9orf2|CT120.1|H7365|TR-1	transmembrane protein with EGF like and two follistatin like domains 1	protein-coding
18.4667-9	chr9	27689209	27689478	+	0.133333	NA	Intergenic	Intergenic	-115477	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
30.3667-6	chr3	16838832	16839364	+	0.133333	NA	Intergenic	Intergenic	-45857	NM_001144382	23228	Hs.202010	NM_015184	ENSG00000154822	PLCL2	PLCE2	phospholipase C like 2	protein-coding
29.6666	chr1	193170183	193170737	+	0.133333	NA	intron (NM_024529, intron 10 of 16)	L1PA13|LINE|L1	16153	NM_003783	8707	Hs.518834	NM_003783	ENSG00000162630	B3GALT2	BETA3GALT2|GLCT2|beta3Gal-T2	beta-1,3-galactosyltransferase 2	protein-coding
30.8-2	chr1	212641113	212641526	+	0.133333	NA	Intergenic	Intergenic	16845	NM_153606	149647	Hs.129293	NM_153606	ENSG00000162771	FAM71A	GARI-L4	family with sequence similarity 71 member A	protein-coding
17.8667-4	chr14	41022083	41022427	+	0.133333	NA	intron (NR_109758, intron 3 of 3)	L1PA15-16|LINE|L1	67544	NR_109758	644919	Hs.434414	NR_109757		LINC02315	-	long intergenic non-protein coding RNA 2315	ncRNA
25-9	chr5	11116264	11116620	+	0.133333	NA	intron (NM_001288715, intron 12 of 20)	intron (NM_001288715, intron 12 of 20)	-355208	NM_001291963	1611	Hs.75189	NM_004394	ENSG00000112977	DAP	-	death associated protein	protein-coding
22.5333-6	chr12	33693551	33693741	+	0.133333	NA	Intergenic	BLACKJACK|DNA|hAT-Blackjack	-253827	NM_198992	341359	Hs.118703	NM_198992	ENSG00000110975	SYT10	-	synaptotagmin 10	protein-coding
15.4-8	chr13	32045222	32045350	+	0.133333	NA	intron (NM_023037, intron 1 of 60)	L2|LINE|L2	13512	NM_023037	10129	Hs.507669	NM_023037	ENSG00000073910	FRY	13CDNA73|214K23.2|C13orf14|CG003|bA207N4.2|bA37E23.1	FRY microtubule binding protein	protein-coding
28.4-9	chr2	210868428	210868739	+	0.133333	NA	Intergenic	L1PA10|LINE|L1	251012	NR_002763	29034	Hs.658398	NR_002763	ENSG00000280837	CPS1-IT1	CPS1-IT|CPS1IT|CPS1IT1|PRO0132	CPS1 intronic transcript 1	ncRNA
28.7666-4	chr16	26418777	26419184	+	0.133333	NA	Intergenic	L1M4a1|LINE|L1	393743	NR_036146	100422923		NR_036146	ENSG00000265005	MIR548W	-	microRNA 548w	ncRNA
26.9333	chr1	172221931	172222336	+	0.133333	NA	intron (NR_146559, intron 15 of 20)	Charlie15a|DNA|hAT-Charlie	-77298	NR_038397	100628315	Hs.584880	NR_038397		DNM3OS	DNM3-AS1|MIR199A2HG	DNM3 opposite strand/antisense RNA	ncRNA
39.7-5	chr2	58408307	58408699	+	0.133333	NA	Intergenic	L1MC1|LINE|L1	-112250	NR_033873	400955	Hs.503210	NR_033873	ENSG00000233723	LINC01122	-	long intergenic non-protein coding RNA 1122	ncRNA
23.8-3	chr14	29223338	29223665	+	0.133333	NA	Intergenic	Intergenic	-437714	NR_135255	105370424	Hs.375809	NR_135255	ENSG00000257056	LINC02282	-	long intergenic non-protein coding RNA 2282	ncRNA
19.6667-4	chr8	13559178	13559463	+	0.133333	NA	intron (NM_001348082, intron 1 of 16)	intron (NM_001348082, intron 1 of 16)	-7549	NM_001007090	157773	Hs.104941	NM_001007090	ENSG00000164743	C8orf48	-	chromosome 8 open reading frame 48	protein-coding
29.9666-3	chr9	27056957	27057537	+	0.133333	NA	intron (NM_025103, intron 18 of 19)	intron (NM_025103, intron 18 of 19)	-51575	NM_022901	64922	Hs.128071	NM_022901	ENSG00000184434	LRRC19	-	leucine rich repeat containing 19	protein-coding
25.7-6	chr12	44539407	44539910	+	0.133333	NA	intron (NM_006159, intron 16 of 20)	L1ME1|LINE|L1	336003	NM_001145109	4753	Hs.505326	NM_006159	ENSG00000184613	NELL2	NRP2	neural EGFL like 2	protein-coding
19.7333-10	chr9	32023578	32023804	+	0.133333	NA	Intergenic	L1PB1|LINE|L1	-360912	NM_001278352	48	Hs.567229	NM_002197	ENSG00000122729	ACO1	ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1	aconitase 1	protein-coding
35.9333-6	chr3	127229777	127230104	+	0.133333	NA	Intergenic	L2c|LINE|L2	36809	NM_001007534	285311	Hs.591284	NM_001007534	ENSG00000214324	C3orf56	-	chromosome 3 open reading frame 56	protein-coding
24.1-8	chr8	130858070	130858525	+	0.133333	NA	intron (NM_001115, intron 9 of 17)	L1MC3|LINE|L1	182612	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
21.2666-7	chr3	147002538	147002741	+	0.133333	NA	Intergenic	L2|LINE|L2	80716	NR_135561	101927866	Hs.586116	NR_135560	ENSG00000242671	LINC02010	-	long intergenic non-protein coding RNA 2010	ncRNA
29.6333-5	chr4	64192480	64192956	+	0.133333	NA	Intergenic	L1MA3|LINE|L1	216732	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
23.5-2	chr11	8797799	8798265	+	0.133333	NA	intron (NR_120590, intron 4 of 4)	L2a|LINE|L2	12642	NM_213618	6764	Hs.117715	NM_005418	ENSG00000166444	ST5	DENND2B|HTS1|p126	suppression of tumorigenicity 5	protein-coding
28.4-5	chr17	3980387	3980755	+	0.133333	NA	intron (NR_146884, intron 1 of 1)	intron (NR_146884, intron 1 of 1)	3468	NR_146884	105371496	Hs.579239	NR_146884		LINC01975	-	long intergenic non-protein coding RNA 1975	ncRNA
20.7666-4	chr3	110243154	110243500	+	0.133333	NA	Intergenic	Intergenic	640499	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
28.1666-2	chr10	62070072	62070679	+	0.133333	NA	intron (NM_001244638, intron 5 of 6)	intron (NM_001244638, intron 5 of 6)	21018	NM_001244638	84159	Hs.535297	NM_032199	ENSG00000150347	ARID5B	DESRT|MRF-2|MRF2	AT-rich interaction domain 5B	protein-coding
20.7666-2	chr2	120126885	120127308	+	0.133333	NA	intron (NM_001330310, intron 16 of 24)	L1MEc|LINE|L1	96304	NM_024121	79134	Hs.376722	NM_024121	ENSG00000226479	TMEM185B	FAM11B	transmembrane protein 185B	protein-coding
30.8-3	chr14	100587808	100588192	+	0.133333	NA	Intergenic	Intergenic	-18208	NM_020836	57596	Hs.211751	NM_020836	ENSG00000183092	BEGAIN	-	brain enriched guanylate kinase associated	protein-coding
37.4666	chr2	180521264	180521879	+	0.133333	NA	Intergenic	Intergenic	-170533	NR_104322	101669767		NR_104319	ENSG00000281131	SCHLAP1	LINC00913|PCAT11|PCAT114	SWI/SNF complex antagonist associated with prostate cancer 1	ncRNA
23.3-16	chrX	23518425	23518608	+	0.133333	NA	Intergenic	L1MA1|LINE|L1	-148977	NM_006406	10549	Hs.83383	NM_006406	ENSG00000123131	PRDX4	AOE37-2|AOE372|HEL-S-97n|PRX-4	peroxiredoxin 4	protein-coding
22.2666-3	chr2	108190835	108191096	+	0.133333	NA	intron (NR_131251, intron 1 of 4)	L1PA16|LINE|L1	26876	NR_131251	102724774	Hs.626744	NR_131251	ENSG00000225328	LINC01594	TCONS_l2_00015893	long intergenic non-protein coding RNA 1594	ncRNA
10.4667-4	chr3	58424003	58424091	+	0.133333	NA	intron (NM_001349540, intron 16 of 16)	intron (NM_001349540, intron 16 of 16)	9785	NM_000925	5162	Hs.161357	NM_000925	ENSG00000168291	PDHB	PDHBD|PDHE1-B|PDHE1B|PHE1B	pyruvate dehydrogenase E1 beta subunit	protein-coding
27.5999-2	chr6	132940353	132940590	+	0.133333	NA	Intergenic	MSTB-int|LTR|ERVL-MaLR	123252	NR_002436	594839	Hs.671378	NR_002436	ENSG00000200534	SNORA33	ACA33	small nucleolar RNA, H/ACA box 33	snoRNA
31.8-14	chr9	108476358	108476669	+	0.133333	NA	Intergenic	Intergenic	379473	NM_006686	10880	Hs.534390	NM_006686	ENSG00000148156	ACTL7B	Tact1	actin like 7B	protein-coding
18.8666-2	chr6	35637044	35637225	+	0.133333	NA	exon (NM_004117, exon 3 of 11)	exon (NM_004117, exon 3 of 11)	27655	NR_049873	100847048		NR_049873	ENSG00000265527	MIR5690	-	microRNA 5690	ncRNA
12.7333-11	chr8	122332333	122332428	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	236264	NR_131202	105375734	Hs.628341	NR_131202		SMILR	-	smooth muscle induced lncRNA, enhancer of proliferation	ncRNA
49.6667	chr4	33563926	33564624	+	0.133333	NA	Intergenic	LTR37B|LTR|ERV1	475618	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
21.3-20	chr7	66657795	66658089	+	0.133333	NA	intron (NM_001367722, intron 1 of 7)	L1M4|LINE|L1	3375	NM_001367737	27342	Hs.530053	NM_014504	ENSG00000154710	RABGEF1	RABEX5|RAP1|rabex-5	RAB guanine nucleotide exchange factor 1	protein-coding
9.13332	chr12	41633913	41634026	+	0.133333	NA	Intergenic	Intergenic	-130220	NR_135041	101927038	Hs.98588	NR_135040	ENSG00000257784	LINC02400	-	long intergenic non-protein coding RNA 2400	ncRNA
35.1666-3	chr5	2623961	2624234	+	0.133333	NA	Intergenic	L1MEj|LINE|L1	-88494	NR_145480	101234261		NR_145480	ENSG00000281560	LSINCT5	-	long stress-induced non-coding transcript 5	ncRNA
55.7333	chr10	105691210	105691957	+	0.133333	NA	intron (NR_120625, intron 3 of 3)	L1MA7|LINE|L1	128750	NR_120625	101927549	Hs.556885	NR_120625		LINC02627	-	long intergenic non-protein coding RNA 2627	ncRNA
22.6333-9	chr19	34853952	34854212	+	0.133333	NA	Intergenic	Intergenic	-21213	NR_033982	400685	Hs.730118	NR_033982	ENSG00000267767	LINC01801	-	long intergenic non-protein coding RNA 1801	ncRNA
29.4333-3	chr16	75224849	75225305	+	0.133333	NA	TTS (NM_001906)	TTS (NM_001906)	-1306	NR_109777	100506281	Hs.710310	NR_109777	ENSG00000240338	LOC100506281	-	uncharacterized LOC100506281	ncRNA
8.83332	chr22	34595550	34595642	+	0.133333	NA	Intergenic	MER63B|DNA|hAT-Blackjack	402320	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
24.4333-9	chr8	125029573	125029996	+	0.133333	NA	intron (NM_014846, intron 27 of 28)	intron (NM_014846, intron 27 of 28)	31279	NM_003129	6713	Hs.71465	NM_003129	ENSG00000104549	SQLE	-	squalene epoxidase	protein-coding
18.1-2	chr10	61883427	61883668	+	0.133333	NA	Intergenic	Intergenic	-18152	NM_032199	84159	Hs.535297	NM_032199	ENSG00000150347	ARID5B	DESRT|MRF-2|MRF2	AT-rich interaction domain 5B	protein-coding
28.3-6	chr4	121156597	121157046	+	0.133333	NA	intron (NM_001128843, intron 7 of 12)	intron (NM_001128843, intron 7 of 12)	7500	NM_024873	79931	Hs.208206	NM_024873	ENSG00000050730	TNIP3	ABIN-3|LIND	TNFAIP3 interacting protein 3	protein-coding
24	chr10	122950561	122950828	+	0.133333	NA	intron (NM_024942, intron 3 of 5)	L2a|LINE|L2	3533	NM_024942	80007	Hs.501286	NM_024942	ENSG00000119965	C10orf88	-	chromosome 10 open reading frame 88	protein-coding
32.8-10	chr6	69166924	69167214	+	0.133333	NA	intron (NM_001704, intron 17 of 31)	MamRep605|LTR?|LTR?	531787	NM_001704	577	Hs.13261	NM_001704	ENSG00000135298	ADGRB3	BAI3	adhesion G protein-coupled receptor B3	protein-coding
29.9999	chr4	90141884	90142372	+	0.133333	NA	intron (NM_001145065, intron 1 of 10)	intron (NM_001145065, intron 1 of 10)	14595	NM_001145065	401145	Hs.654735	NM_207491	ENSG00000184305	CCSER1	FAM190A	coiled-coil serine rich protein 1	protein-coding
24.3666-2	chr20	49308025	49308566	+	0.133333	NA	Intergenic	AluY|SINE|Alu	27612	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	small nucleolar RNA, C/D box 12	snoRNA
15.4-10	chr15	87766764	87766896	+	0.133333	NA	Intergenic	Intergenic	179438	NR_162119	113218493		NR_162119		MIR11181	-	microRNA 11181	ncRNA
6.53333	chr14	72493211	72493290	+	0.133333	NA	intron (NM_001370294, intron 12 of 14)	HAL1|LINE|L1	-23570	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA
20.6-12	chr6	124047368	124047817	+	0.133333	NA	intron (NM_001040214, intron 1 of 6)	LTR84b|LTR|ERVL	-235413	NM_001300740	154215	Hs.656604	NM_153355	ENSG00000188580	NKAIN2	FAM77B|NKAIP2|TCBA|TCBA1	sodium/potassium transporting ATPase interacting 2	protein-coding
19.2667-6	chr18	11113170	11113446	+	0.133333	NA	intron (NM_022068, intron 1 of 51)	MER92B|LTR|ERV1	35454	NM_022068	63895	Hs.436902	NM_022068	ENSG00000154864	PIEZO2	C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS	piezo type mechanosensitive ion channel component 2	protein-coding
20.6333-5	chr14	89973218	89973603	+	0.133333	NA	intron (NM_001008744, intron 5 of 15)	intron (NM_001008744, intron 5 of 15)	17483	NM_018319	55775	Hs.209945	NM_018319	ENSG00000042088	TDP1	-	tyrosyl-DNA phosphodiesterase 1	protein-coding
20.4-9	chr4	33775542	33775844	+	0.133333	NA	Intergenic	MLT1A1|LTR|ERVL-MaLR	264200	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
33.7666	chr9	84992477	84992854	+	0.133333	NA	intron (NM_001018064, intron 16 of 17)	intron (NM_001018064, intron 16 of 17)	286764	NM_001369552	4915	Hs.494312	NM_006180	ENSG00000148053	NTRK2	EIEE58|GP145-TrkB|OBHD|TRKB|trk-B	neurotrophic receptor tyrosine kinase 2	protein-coding
48.8332	chr3	167503090	167503498	+	0.133333	NA	intron (NM_001348951, intron 17 of 18)	MSTA-int|LTR|ERVL-MaLR	-29162	NM_006217	5276	Hs.445555	NM_006217	ENSG00000114204	SERPINI2	MEPI|PANCPIN|PI14|TSA2004	serpin family I member 2	protein-coding
17.0667-7	chr2	204216222	204216449	+	0.133333	NA	Intergenic	Tigger2|DNA|TcMar-Tigger	279587	NM_012092	29851	Hs.56247	NM_012092	ENSG00000163600	ICOS	AILIM|CD278|CVID1	inducible T cell costimulator	protein-coding
10.4-3	chr12	13119620	13119728	+	0.133333	NA	Intergenic	Intergenic	-16007	NM_001367362	83445	Hs.240053	NM_031289	ENSG00000111305	GSG1	-	germ cell associated 1	protein-coding
29.2333-3	chr17	686725	687208	+	0.133333	NA	intron (NM_001366254, intron 4 of 19).2	AluJr|SINE|Alu	27873	NM_018289	55275	Hs.461819	NM_018289	ENSG00000141252	VPS53	HCCS1|PCH2E|hVps53L|pp13624	VPS53 subunit of GARP complex	protein-coding
26.8333-5	chr2	110676608	110677045	+	0.133333	NA	intron (NM_001278617, intron 1 of 23)	intron (NM_001278617, intron 1 of 23)	1237	NM_004336	699	Hs.469649	NM_004336	ENSG00000169679	BUB1	BUB1A|BUB1L|hBUB1	BUB1 mitotic checkpoint serine/threonine kinase	protein-coding
38.4999	chr12	83441433	83441916	+	0.133333	NA	Intergenic	Tigger4a|DNA|TcMar-Tigger	754519	NM_001320322	160335	Hs.577775	NM_152588	ENSG00000179104	TMTC2	IBDBP1	transmembrane O-mannosyltransferase targeting cadherins 2	protein-coding
48.6333	chr9	98494314	98494887	+	0.133333	NA	intron (NM_005458, intron 4 of 18)	MIRb|SINE|MIR	214335	NM_005458	9568	Hs.198612	NM_005458	ENSG00000136928	GABBR2	EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS	gamma-aminobutyric acid type B receptor subunit 2	protein-coding
23.9-11	chr7	22173483	22173866	+	0.133333	NA	intron (NM_001367603, intron 1 of 5)	intron (NM_001367603, intron 1 of 5)	20071	NM_001367603	9771	Hs.174768	NM_012294	ENSG00000136237	RAPGEF5	GFR|MR-GEF|REPAC	Rap guanine nucleotide exchange factor 5	protein-coding
42.0666	chr12	18667386	18667884	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	69874	NM_001330769	89869	Hs.97542	NM_033123	ENSG00000139151	PLCZ1	NYD-SP27|PLC-zeta-1|PLCzeta|SPGF17	phospholipase C zeta 1	protein-coding
23.2-18	chr6	167840352	167840716	+	0.133333	NA	intron (NM_001291964, intron 1 of 32)	MLT1I|LTR|ERVL-MaLR	12899	NM_001291964	4301	Hs.614974	NM_005936	ENSG00000130396	AFDN	AF6|MLL-AF6|MLLT4|l-afadin	afadin, adherens junction formation factor	protein-coding
44.4-13	chr9	81376803	81377464	+	0.133333	NA	Intergenic	Intergenic	312402	NM_001303103	7088	Hs.197320	NM_005077	ENSG00000196781	TLE1	ESG|ESG1|GRG1	TLE family member 1, transcriptional corepressor	protein-coding
16.9667-7	chr3	121237315	121237603	+	0.133333	NA	intron (NM_001348343, intron 12 of 27)	MSTB1-int|LTR|ERVL-MaLR	187819	NR_049861	100847043		NR_049861	ENSG00000264477	MIR5682	-	microRNA 5682	ncRNA
21.8333-10	chr4	149622793	149623147	+	0.133333	NA	intron (NM_001363507, intron 7 of 13)	intron (NM_001363507, intron 7 of 13)	192873	NM_001363509	285423	Hs.591689	NM_001363507	ENSG00000234828	IQCM	-	IQ motif containing M	protein-coding
33.4999	chr7	3596895	3597171	+	0.133333	NA	intron (NM_152744, intron 1 of 44)	AluY|SINE|Alu	295781	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
30.6-9	chr4	64496617	64496940	+	0.133333	NA	Intergenic	Intergenic	-87318	NM_001363796	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
18-11	chr2	172830163	172830468	+	0.133333	NA	intron (NM_001100397, intron 1 of 27)	intron (NM_001100397, intron 1 of 27)	8728	NM_001100397	11069	Hs.470646	NM_007023	ENSG00000091428	RAPGEF4	CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496	Rap guanine nucleotide exchange factor 4	protein-coding
50.0999-4	chr5	128986863	128987442	+	0.133333	NA	intron (NM_001017372, intron 2 of 9)	HAL1|LINE|L1	21664	NM_001017372	28965	Hs.49765	NM_014031	ENSG00000113396	SLC27A6	ACSVL2|FACVL2|FATP6|VLCS-H1	solute carrier family 27 member 6	protein-coding
31.1999-5	chr8	82846317	82846583	+	0.133333	NA	Intergenic	Intergenic	-65654	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
12.2333-7	chr5	166363453	166363596	+	0.133333	NA	Intergenic	Intergenic	562846	NR_108020	102557615		NR_108020	ENSG00000254130	LINC01947	CTB-7E3.1	long intergenic non-protein coding RNA 1947	ncRNA
30.9333-4	chr2	133817921	133818263	+	0.133333	NA	Intergenic	Intergenic	-249629	NM_207363	344148	Hs.537329	NM_207363	ENSG00000176771	NCKAP5	ERIH1|ERIH2|NAP5	NCK associated protein 5	protein-coding
23.6-4	chr12	31539983	31540315	+	0.133333	NA	intron (NM_001308339, intron 1 of 22)	L1MA3|LINE|L1	-49774	NR_046909	100874249	Hs.627628	NR_046909	ENSG00000255867	DENND5B-AS1	-	DENND5B antisense RNA 1	ncRNA
32.1333-5	chr22	29498550	29498921	+	0.133333	NA	Intergenic	L1M5|LINE|L1	18517	NM_021076	4744	Hs.198760	NM_021076	ENSG00000100285	NEFH	CMT2CC|NFH	neurofilament heavy	protein-coding
16.8	chr1	194326165	194326372	+	0.133333	NA	Intergenic	Intergenic	1021523	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
21.8333-5	chr2	67185736	67186192	+	0.133333	NA	intron (NR_038844, intron 3 of 7)	intron (NR_038844, intron 3 of 7)	-27444	NR_110568	101927661	Hs.580508	NR_110568	ENSG00000235885	LOC101927661	-	uncharacterized LOC101927661	ncRNA
29.3333-6	chr18	63010216	63010612	+	0.133333	NA	Intergenic	L1MC2|LINE|L1	294873	NM_194449	23239	Hs.465337	NM_194449	ENSG00000081913	PHLPP1	PHLPP|PLEKHE1|PPM3A|SCOP	PH domain and leucine rich repeat protein phosphatase 1	protein-coding
23.9999	chr12	51008568	51008765	+	0.133333	NA	intron (NR_033422, intron 2 of 17)	intron (NR_033422, intron 2 of 17)	549	NM_001174130	4891	Hs.505545	NM_000617	ENSG00000110911	SLC11A2	AHMIO1|DCT1|DMT1|NRAMP2	solute carrier family 11 member 2	protein-coding
19.8-7	chr2	59576137	59576308	+	0.133333	NA	Intergenic	Intergenic	358514	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
46.7999	chr10	68626082	68626479	+	0.133333	NA	intron (NM_030625, intron 3 of 11)	AluJo|SINE|Alu	65943	NM_030625	80312	Hs.258855	NM_030625	ENSG00000138336	TET1	CXXC6|LCX|bA119F7.1	tet methylcytosine dioxygenase 1	protein-coding
22.5-9	chr8	5500304	5500786	+	0.133333	NA	Intergenic	Intergenic	-505631	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding
40.8666-2	chr4	57291534	57292047	+	0.133333	NA	Intergenic	Intergenic	-134082	NR_125907	101928851	Hs.555072	NR_125907	ENSG00000248505	LINC02380	-	long intergenic non-protein coding RNA 2380	ncRNA
66.3333-2	chr9	105632544	105633346	+	0.133333	NA	intron (NR_147213, intron 9 of 9)	intron (NR_147213, intron 9 of 9)	-29512	NM_005421	6887	Hs.247978	NM_005421	ENSG00000186051	TAL2	-	TAL bHLH transcription factor 2	protein-coding
31.3333-4	chr17	69933385	69933726	+	0.133333	NA	Intergenic	Intergenic	-28152	NR_110874	102723487	Hs.451409	NR_110874	ENSG00000237560	LINC01497	-	long intergenic non-protein coding RNA 1497	ncRNA
28.7333-9	chr2	182918537	182918870	+	0.133333	NA	3' UTR (NM_205842, exon 32 of 32)	3' UTR (NM_205842, exon 32 of 32)	-52066	NM_001463	2487	Hs.128453	NM_001463	ENSG00000162998	FRZB	FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ	frizzled related protein	protein-coding
6.23332-2	chr8	78784001	78784090	+	0.133333	NA	intron (NM_001199886, intron 2 of 4)	intron (NM_001199886, intron 2 of 4)	21418	NM_000880	3574	Hs.591873	NM_000880	ENSG00000104432	IL7	IL-7	interleukin 7	protein-coding
26.1666-3	chr18	10431050	10431452	+	0.133333	NA	Intergenic	HAL1b|LINE|L1	-16881	NR_110775	101927350	Hs.572523	NR_110775	ENSG00000260913	LINC01254	-	long intergenic non-protein coding RNA 1254	ncRNA
9.96664	chr3	60031850	60031924	+	0.133333	NA	intron (NM_001320901, intron 2 of 6)	Charlie4a|DNA|hAT-Charlie	49022	NR_135491	2272	Hs.655995	NM_002012	ENSG00000189283	FHIT	AP3Aase|FRA3B	fragile histidine triad diadenosine triphosphatase	protein-coding
29.5666-3	chr7	145825943	145826325	+	0.133333	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-948137	NM_014141	26047	Hs.655684	NM_014141	ENSG00000174469	CNTNAP2	AUTS15|CASPR2|CDFE|NRXN4|PTHSL1	contactin associated protein like 2	protein-coding
36.1333-9	chr5	3661604	3662003	+	0.133333	NA	Intergenic	Intergenic	65971	NM_024337	79192	Hs.424156	NM_024337	ENSG00000170549	IRX1	IRX-5|IRXA1	iroquois homeobox 1	protein-coding
17.8333	chr1	54852004	54852250	+	0.133333	NA	3' UTR (NM_014762, exon 9 of 9)	3' UTR (NM_014762, exon 9 of 9)	35068	NM_014762	1718	Hs.498727	NM_014762	ENSG00000116133	DHCR24	DCE|Nbla03646|SELADIN1|seladin-1	24-dehydrocholesterol reductase	protein-coding
32.8666-4	chr17	29992615	29992962	+	0.133333	NA	intron (NR_026738, intron 4 of 15)	L1MA7|LINE|L1	51154	NR_026738	374786	Hs.662411	NM_198529	ENSG00000176927	EFCAB5	-	EF-hand calcium binding domain 5	protein-coding
22.8666-3	chr1	109138302	109138576	+	0.133333	NA	intron (NM_001284352, intron 1 of 20)	intron (NM_001284352, intron 1 of 20)	24324	NM_001284352	57535	Hs.708190	NM_020775	ENSG00000116299	KIAA1324	EIG121	KIAA1324	protein-coding
17.4-2	chr10	54431946	54432170	+	0.133333	NA	intron (NM_001142773, intron 2 of 31)	L1MA2|LINE|L1	-54172	NR_134503	105378311	Hs.623892	NR_134503	ENSG00000234173	LOC105378311	-	uncharacterized LOC105378311	ncRNA
25.3-3	chr12	32021930	32022433	+	0.133333	NA	Intergenic	AluY|SINE|Alu	62766	NM_018169	55196	Hs.445129	NM_018169	ENSG00000174718	RESF1	C12orf35|GET|KIAA1551|UTA2-1	retroelement silencing factor 1	protein-coding
34.3333-3	chr10_GL383545v1_alt	41748	42111	+	0.133333	NA	intron (NR_138082, intron 1 of 1)	intron (NR_138082, intron 1 of 1)	38911	NR_138082	101060171	Hs.568842	NR_138082		ARMC4P1	-	armadillo repeat containing 4 pseudogene 1	pseudo
26.9333-11	chr2	119223054	119223340	+	0.133333	NA	promoter-TSS (NM_182915)	promoter-TSS (NM_182915)	-637	NM_182915	55240	Hs.647822	NM_018234	ENSG00000115107	STEAP3	AHMIO2|STMP3|TSAP6|dudlin-2|dudulin-2|pHyde	STEAP3 metalloreductase	protein-coding
20.6666-5	chr2	43427842	43428125	+	0.133333	NA	intron (NM_001083953, intron 28 of 37)	(TA)n|Simple_repeat|Simple_repeat	167991	NM_001083953	63892	Hs.369592	NM_022065	ENSG00000115970	THADA	ARMC13|GITA	THADA armadillo repeat containing	protein-coding
24.4666-5	chr4	178220061	178220500	+	0.133333	NA	Intergenic	Intergenic	-312344	NR_108092	101928656	Hs.508131	NR_108092	ENSG00000251504	LINC01099	-	long intergenic non-protein coding RNA 1099	ncRNA
36.6999-2	chr2	173898508	173899044	+	0.133333	NA	Intergenic	Intergenic	65104	NM_001017371	6670	Hs.531587	NM_003111	ENSG00000172845	SP3	SPR2	Sp3 transcription factor	protein-coding
22.0333-9	chr9	124852315	124852494	+	0.133333	NA	Intergenic	Intergenic	-1013	NM_001276374	401551	Hs.343383	NM_001045476	ENSG00000136918	WDR38	-	WD repeat domain 38	protein-coding
30.9333-3	chr18	70504528	70504957	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-120151	NR_110764	101060542	Hs.586967	NR_110764	ENSG00000266278	LINC01910	-	long intergenic non-protein coding RNA 1910	ncRNA
16.7333-9	chr20	32276200	32276362	+	0.133333	NA	Intergenic	MLT1J2|LTR|ERVL-MaLR	-1370	NM_004798	9371	Hs.369670	NM_004798	ENSG00000101350	KIF3B	FLA8|HH0048|KLP-11	kinesin family member 3B	protein-coding
30.2-2	chr11	45456597	45456951	+	0.133333	NA	Intergenic	Intergenic	85377	NR_122071	399886	Hs.559970	NR_122071	ENSG00000255267	LINC02687	-	long intergenic non-protein coding RNA 2687	ncRNA
40.7333	chr1	214068540	214068991	+	0.133333	NA	Intergenic	Intergenic	80232	NM_002763	5629	Hs.741808	NM_002763	ENSG00000117707	PROX1	-	prospero homeobox 1	protein-coding
29.6667-2	chr11	38744080	38744513	+	0.133333	NA	Intergenic	L1MEg|LINE|L1	95438	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
19.7-11	chr4	185404098	185404245	+	0.133333	NA	intron (NM_018359, intron 10 of 11)	intron (NM_018359, intron 10 of 11)	7330	NM_181726	353322	Hs.508154	NM_181726	ENSG00000186352	ANKRD37	Lrp2bp	ankyrin repeat domain 37	protein-coding
44-6	chr6	52702530	52703059	+	0.133333	NA	Intergenic	Intergenic	31681	NM_014051	28978	Hs.94896	NM_014051	ENSG00000096092	TMEM14A	C6orf73|PTD011	transmembrane protein 14A	protein-coding
40.3	chr1	45439275	45439785	+	0.133333	NA	intron (NM_001320800, intron 1 of 9)	MIR|SINE|MIR	51633	NM_001320800	10420	Hs.591499	NM_007170	ENSG00000070759	TESK2	-	testis associated actin remodelling kinase 2	protein-coding
26.1333-2	chr1	112090027	112090289	+	0.133333	NA	Intergenic	MER39|LTR|ERV1	99622	NR_145438	643355	Hs.279714	NR_145438	ENSG00000231437	LINC01750	-	long intergenic non-protein coding RNA 1750	ncRNA
41.5333	chr12	6194999	6195560	+	0.133333	NA	Intergenic	Intergenic	-4667	NM_001330312	928	Hs.114286	NM_001769	ENSG00000010278	CD9	BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29	CD9 molecule	protein-coding
43.7999	chr18	12592524	12593153	+	0.133333	NA	intron (NM_020148, intron 2 of 15)	intron (NM_020148, intron 2 of 15)	63894	NM_001128627	56907	Hs.515283	NM_020148	ENSG00000134278	SPIRE1	Spir-1	spire type actin nucleation factor 1	protein-coding
19.5333-2	chr11	15627012	15627203	+	0.133333	NA	Intergenic	Intergenic	-16778	NM_001293172	102724957	Hs.512245	NM_001293172		LOC102724957	-	uncharacterized LOC102724957	protein-coding
18.8333-16	chr5	171509383	171509605	+	0.133333	NA	Intergenic	Intergenic	89847	NM_003862	8817	Hs.87191	NM_003862	ENSG00000156427	FGF18	FGF-18|ZFGF5	fibroblast growth factor 18	protein-coding
48.5999	chr12	87903326	87903877	+	0.133333	NA	Intergenic	Intergenic	-118890	NR_033410	400058	Hs.572212	NR_033410		MKRN9P	MKRN5|MKRN9|MKRNP6|RNF65|ZNF127L3	makorin ring finger protein 9, pseudogene	pseudo
26.5333-12	chr5	124530996	124531338	+	0.133333	NA	Intergenic	L2c|LINE|L2	-92647	NR_125774	103724389	Hs.582211	NR_125774		LINC01170	-	long intergenic non-protein coding RNA 1170	ncRNA
31-4	chr16	29646643	29647160	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	-16049	NM_001030288	6693	Hs.632188	NM_003123	ENSG00000197471	SPN	CD43|GALGP|GPL115|LSN	sialophorin	protein-coding
35.5666-2	chr10	50811417	50812126	+	0.133333	NA	intron (NM_001370131, intron 9 of 11)	(TTGT)n|Simple_repeat|Simple_repeat	71835	NM_001321960	653308	Hs.659820	NM_001079516	ENSG00000204147	ASAH2B	ASAH2C|ASAH2L|bA449O16.3|bA98I6.3	N-acylsphingosine amidohydrolase 2B	protein-coding
25.8666	chr10	84719205	84719434	+	0.133333	NA	Intergenic	MLT2B2|LTR|ERVL	294150	NM_001284242	54462	Hs.461988	NM_018999	ENSG00000107771	CCSER2	FAM190B|Gcap14|KIAA1128|bA486O22.1	coiled-coil serine rich protein 2	protein-coding
14.4666	chr5	159541720	159541873	+	0.133333	NA	Intergenic	Intergenic	-75520	NR_027110	285627	Hs.552766	NR_027110	ENSG00000253298	LINC01845	-	long intergenic non-protein coding RNA 1845	ncRNA
22.5333-10	chr15	101437988	101438300	+	0.133333	NA	intron (NM_138325, intron 2 of 13)	MLT1B|LTR|ERVL-MaLR	51563	NM_138322	5046	Hs.498494	NM_002570	ENSG00000140479	PCSK6	PACE4|SPC4	proprotein convertase subtilisin/kexin type 6	protein-coding
32.5333-9	chr6	67051135	67051594	+	0.133333	NA	Intergenic	L1MA9|LINE|L1	-1003987	NR_125869	102723883	Hs.566528	NR_125869	ENSG00000223504	LOC102723883	-	uncharacterized LOC102723883	ncRNA
28.8-8	chr20	60099992	60100335	+	0.133333	NA	intron (NR_109917, intron 3 of 4)	intron (NR_109917, intron 3 of 4)	12477	NR_109918	729296	Hs.534781	NR_109916		LOC729296	-	uncharacterized LOC729296	ncRNA
34.6-5	chr13	29989102	29989666	+	0.133333	NA	Intergenic	L1M2c|LINE|L1	52853	NR_033889	440131	Hs.132371	NM_001010918		LINC00544	-	long intergenic non-protein coding RNA 544	ncRNA
37.4666-3	chr7	42869569	42870260	+	0.133333	NA	Intergenic	Intergenic	41929	NM_001363436	79020	Hs.698120	NM_024054	ENSG00000136197	C7orf25	-	chromosome 7 open reading frame 25	protein-coding
37.5333-6	chr4	32479232	32479691	+	0.133333	NA	Intergenic	Intergenic	128423	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
28.7999-2	chr2	76695363	76695602	+	0.133333	NA	Intergenic	L1MC3|LINE|L1	-290483	NR_110284	101927907	Hs.382185	NR_110284	ENSG00000234653	LOC101927907	-	uncharacterized LOC101927907	ncRNA
23.8666-7	chr8	137214598	137214867	+	0.133333	NA	Intergenic	Intergenic	198856	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
33-2	chr11	98804764	98805402	+	0.133333	NA	Intergenic	Intergenic	-215866	NM_014361	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
41.5999	chr1	109385281	109385713	+	0.133333	NA	intron (NM_002959, intron 1 of 19)	intron (NM_002959, intron 1 of 19)	7860	NM_001205228	6272	Hs.485195	NM_002959	ENSG00000134243	SORT1	Gp95|LDLCQ6|NT3|NTR3	sortilin 1	protein-coding
28.3666	chr1	8943772	8944120	+	0.133333	NA	Intergenic	Intergenic	-1922	NM_001270500	765	Hs.100322	NM_001215	ENSG00000131686	CA6	CA-VI|GUSTIN	carbonic anhydrase 6	protein-coding
35-7	chr4	65781564	65781945	+	0.133333	NA	Intergenic	L1MEf|LINE|L1	-111259	NM_001281765	2044	Hs.654492	NM_004439	ENSG00000145242	EPHA5	CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4	EPH receptor A5	protein-coding
27.7666-4	chr10	78306490	78306839	+	0.133333	NA	Intergenic	L2|LINE|L2	39322	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA
54.4-6	chr6	156551609	156552364	+	0.133333	NA	Intergenic	MLT1E2|LTR|ERVL-MaLR	173236	NR_145751	109617011		NR_145751	ENSG00000212295	SNORD28B	-	small nucleolar RNA, C/D box 28B	snoRNA
31.2999-3	chr2	104862237	104862471	+	0.133333	NA	Intergenic	CpG	8239	NM_006236	5455	Hs.248158	NM_006236	ENSG00000198914	POU3F3	BRN1|OTF8|brain-1|oct-8	POU class 3 homeobox 3	protein-coding
15.8333-3	chr10	74906285	74906403	+	0.133333	NA	intron (NM_001370144, intron 3 of 15)	AluSx|SINE|Alu	-6442	NR_134476	101929165	Hs.670533	NR_134476		LOC101929165	-	uncharacterized LOC101929165	ncRNA
45.2666-5	chr20	11255316	11255764	+	0.133333	NA	Intergenic	MLT1H-int|LTR|ERVL-MaLR	17843	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA
11.7333-6	chr8	78043769	78043996	+	0.133333	NA	Intergenic	Intergenic	-472458	NM_006823	5569	Hs.433700	NM_006823	ENSG00000171033	PKIA	PRKACN1	cAMP-dependent protein kinase inhibitor alpha	protein-coding
38.4-13	chr8	134346285	134346747	+	0.133333	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	-251555	NR_002438	594840	Hs.626298	NR_002438	ENSG00000248492	ZFAT-AS1	NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS	ZFAT antisense RNA 1	ncRNA
7.89999	chr9	24929138	24929228	+	0.133333	NA	Intergenic	L1ME4b|LINE|L1	-383286	NM_001365008	100129669	Hs.573530	NM_001271706	ENSG00000205442	IZUMO3	C9orf134|bA20A20.1	IZUMO family member 3	protein-coding
29.7333-15	chr6	138720363	138720762	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	28894	NR_033896	441172	Hs.92290	NR_033896		FLJ46906	-	uncharacterized LOC441172	ncRNA
30.6333-4	chr16	641636	641865	+	0.133333	NA	promoter-TSS (NM_138418)	promoter-TSS (NM_138418)	-78	NR_138606	84331	Hs.706105	NM_032371	ENSG00000172366	MCRIP2	C16orf14|FAM195A|c349E10.1	MAPK regulated corepressor interacting protein 2	protein-coding
18.3333-4	chr11	9691626	9691869	+	0.133333	NA	intron (NM_015055, intron 1 of 11)	MIR3|SINE|MIR	27670	NM_015055	23075	Hs.153026	NM_015055	ENSG00000133789	SWAP70	HSPC321|SWAP-70	switching B cell complex subunit SWAP70	protein-coding
27.5333-12	chr5	118593497	118593811	+	0.133333	NA	Intergenic	Intergenic	-2534	NR_104998	102467225	Hs.582523	NR_104998	ENSG00000249128	LINC02215	-	long intergenic non-protein coding RNA 2215	ncRNA
54.9332	chr6	1765586	1766027	+	0.133333	NA	intron (NM_001253846, intron 7 of 10)	intron (NM_001253846, intron 7 of 10)	155891	NM_001453	2296	Hs.348883	NM_001453	ENSG00000054598	FOXC1	ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3	forkhead box C1	protein-coding
29.7666-2	chr3	156119863	156120247	+	0.133333	NA	promoter-TSS (NM_001308217)	promoter-TSS (NM_001308217)	-493	NM_172160	7881	Hs.654519	NM_003471	ENSG00000169282	KCNAB1	AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3	potassium voltage-gated channel subfamily A member regulatory beta subunit 1	protein-coding
32.3333-5	chr20	56104680	56105032	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-99337	NM_080617	140689	Hs.126141	NM_080617	ENSG00000054803	CBLN4	CBLNL1	cerebellin 4 precursor	protein-coding
15.2333-5	chr17	61663575	61663723	+	0.133333	NA	Intergenic	Intergenic	-72430	NM_199290	342538	Hs.591178	NM_199290	ENSG00000253506	NACA2	ANAC|NACAL	nascent polypeptide associated complex subunit alpha 2	protein-coding
22.2-14	chr4	84822510	84822738	+	0.133333	NA	intron (NM_014991, intron 10 of 67)	AluJr4|SINE|Alu	-142992	NR_152771	404201	Hs.46730	NM_205857	ENSG00000180769	WDFY3-AS2	C4orf12|FBI4|NCRNA00247	WDFY3 antisense RNA 2	ncRNA
26.1666-4	chr5	18168765	18169112	+	0.133333	NA	Intergenic	L1M4|LINE|L1	361664	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
31.1333-9	chr5	9875767	9876137	+	0.133333	NA	intron (NR_027112, intron 4 of 12)	intron (NR_027112, intron 4 of 12)	21575	NR_147004	105374648	Hs.158853	NR_147004		LINC02221	-	long intergenic non-protein coding RNA 2221	ncRNA
31.2-9	chr16	63295641	63296037	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-1259401	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
34.7333-5	chr6	55189917	55190315	+	0.133333	NA	intron (NM_001526, intron 2 of 7)	intron (NM_001526, intron 2 of 7)	83656	NM_001526	3062	Hs.151624	NM_001526	ENSG00000137252	HCRTR2	OX2R	hypocretin receptor 2	protein-coding
33.6-6	chr4	72193449	72193929	+	0.133333	NA	Intergenic	MSTA|LTR|ERVL-MaLR	154557	NM_053036	10886	Hs.99231	NM_004885	ENSG00000056291	NPFFR2	GPR74|HLWAR77|NPFF2|NPGPR	neuropeptide FF receptor 2	protein-coding
31.6333-6	chr17	76962456	76962801	+	0.133333	NA	TTS (NR_136416)	TTS (NR_136416)	6571	NR_136417	105371899	Hs.634683	NR_136416	ENSG00000267568	LOC105371899	-	uncharacterized LOC105371899	ncRNA
24.4	chr1	33605615	33605929	+	0.133333	NA	intron (NM_001281956, intron 41 of 70)	intron (NM_001281956, intron 41 of 70)	133127	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding
38.0666-7	chr7	21224980	21225445	+	0.133333	NA	Intergenic	Intergenic	-202871	NR_137166	6671	Hs.88013	NM_003112	ENSG00000105866	SP4	HF1B|SPR-1	Sp4 transcription factor	protein-coding
55.5332	chr6	53767316	53767755	+	0.133333	NA	Intergenic	Intergenic	-27470	NM_018214	55227	Hs.606493	NM_018214	ENSG00000137269	LRRC1	LANO|dJ523E19.1	leucine rich repeat containing 1	protein-coding
28.9-7	chr17	81061078	81061390	+	0.133333	NA	intron (NM_001144888, intron 3 of 13)	HAL1|LINE|L1	26083	NM_017451	10458	Hs.128316	NM_006340	ENSG00000175866	BAIAP2	BAP2|FLAF3|IRSP53	BAI1 associated protein 2	protein-coding
50.5333-2	chr16	25319009	25319569	+	0.133333	NA	Intergenic	MLT1F2|LTR|ERVL-MaLR	-61444	NM_001012981	342357	Hs.513451	NM_001012981	ENSG00000155592	ZKSCAN2	ZNF694|ZSCAN31|ZSCAN34	zinc finger with KRAB and SCAN domains 2	protein-coding
28.3333-17	chr9	107621091	107621469	+	0.133333	NA	Intergenic	MIR3|SINE|MIR	-131511	NM_004235	9314	Hs.376206	NM_004235	ENSG00000136826	KLF4	EZF|GKLF	Kruppel like factor 4	protein-coding
46.6-5	chr21	26051097	26051761	+	0.133333	NA	intron (NM_001136131, intron 4 of 15)	intron (NM_001136131, intron 4 of 15)	88961	NM_001136016	351	Hs.434980	NM_000484	ENSG00000142192	APP	AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4	amyloid beta precursor protein	protein-coding
29.9333-8	chr2	111655906	111656443	+	0.133333	NA	Intergenic	Intergenic	114960	NR_039928	100616370		NR_039928	ENSG00000264793	MIR4771-1	-	microRNA 4771-1	ncRNA
40.0999-2	chr5	117617847	117618419	+	0.133333	NA	Intergenic	Intergenic	-112228	NR_104997	102467224	Hs.134230	NR_104997		LINC02147	-	long intergenic non-protein coding RNA 2147	ncRNA
32.3666	chr1	83814327	83814664	+	0.133333	NA	intron (NR_119374, intron 2 of 2)	MIRb|SINE|MIR	46051	NR_119374	101927560	Hs.559661	NR_119374	ENSG00000233008	LOC101927560	-	uncharacterized LOC101927560	ncRNA
27.5999	chr12	75211788	75212210	+	0.133333	NA	Intergenic	Intergenic	-2160	NM_001260499	3747	Hs.27214	NM_139136	ENSG00000166006	KCNC2	KV3.2	potassium voltage-gated channel subfamily C member 2	protein-coding
25.7-14	chr8	84316454	84316954	+	0.133333	NA	intron (NM_001354320, intron 2 of 9)	intron (NM_001354320, intron 2 of 9)	-98780	NM_001354308	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
28.1999	chr4	62437397	62437662	+	0.133333	NA	Intergenic	LTR26|LTR|ERV1	-275764	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
46.2-3	chr19	29944518	29945051	+	0.133333	NA	intron (NR_045557, intron 1 of 9)	intron (NR_045557, intron 1 of 9)	2545	NM_003796	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	URI1 prefoldin like chaperone	protein-coding
24.2667-3	chr11	14877875	14878231	+	0.133333	NA	TTS (NM_024514)	TTS (NM_024514)	14152	NM_024514	120227	Hs.371427	NM_024514	ENSG00000186104	CYP2R1	-	cytochrome P450 family 2 subfamily R member 1	protein-coding
15.7333-5	chr11	72519754	72519908	+	0.133333	NA	Intergenic	Intergenic	-50825	NR_126364	101928555	Hs.376950	NR_126364	ENSG00000227467	LINC01537	-	long intergenic non-protein coding RNA 1537	ncRNA
17.7333-14	chr6	49324642	49324874	+	0.133333	NA	Intergenic	L1MEg|LINE|L1	138495	NM_000255	4594	Hs.485527	NM_000255	ENSG00000146085	MMUT	MCM|MUT	methylmalonyl-CoA mutase	protein-coding
23.0666-3	chr5	175214426	175214693	+	0.133333	NA	Intergenic	Intergenic	-218828	NR_046113	441116	Hs.533036	NM_001004348	ENSG00000204754	LINC01951	-	long intergenic non-protein coding RNA 1951	ncRNA
35.3999-2	chr7	33173916	33174257	+	0.133333	NA	intron (NM_198428, intron 4 of 22)	MER57A-int|LTR|ERV1	44522	NM_001348041	27241	Hs.372360	NM_014451	ENSG00000122507	BBS9	B1|C18|D1|PTHB1	Bardet-Biedl syndrome 9	protein-coding
31.8666-2	chr13	56815607	56815908	+	0.133333	NA	Intergenic	L1PB3|LINE|L1	-325161	NM_001130404	729233	Hs.723090	NM_001130404	ENSG00000204918	PRR20B	PRR20|PRR20A|PRR20C|PRR20D|PRR20E	proline rich 20B	protein-coding
33.2666-3	chr9	115137990	115138344	+	0.133333	NA	non-coding (NR_110950, exon 1 of 6)	non-coding (NR_110950, exon 1 of 6)	242	NR_110950	101928748	Hs.650491	NR_110950	ENSG00000236461	LOC101928748	-	uncharacterized LOC101928748	ncRNA
33.8666	chr3	126512335	126512653	+	0.133333	NA	intron (NM_001165974, intron 1 of 20)	AluJr4|SINE|Alu	5279	NM_144639	131669	Hs.331148	NM_144639	ENSG00000159650	UROC1	HMFN0320|UROCD	urocanate hydratase 1	protein-coding
25.3666-3	chr2	11078591	11078856	+	0.133333	NA	Intergenic	AluY|SINE|Alu	53453	NR_040080	285150	Hs.329841	NM_182586	ENSG00000145063	FLJ33534	-	uncharacterized LOC285150	ncRNA
46.6-2	chr12	119592125	119592777	+	0.133333	NA	Intergenic	Intergenic	-1323	NM_001136534	387890	Hs.530965	NM_001136534	ENSG00000224982	TMEM233	DSPB2|IFITMD2	transmembrane protein 233	protein-coding
26.7333-18	chr8	69053169	69053479	+	0.133333	NA	intron (NR_039986, intron 2 of 4)	L1MA6|LINE|L1	50866	NR_039986	100505718	Hs.122386	NR_039986	ENSG00000253658	LINC01592	-	long intergenic non-protein coding RNA 1592	ncRNA
69.1999	chr2	193915711	193916400	+	0.133333	NA	Intergenic	Intergenic	-428214	NR_110222	101927406	Hs.385793	NR_110222	ENSG00000225539	LINC01821	-	long intergenic non-protein coding RNA 1821	ncRNA
34.5666-4	chr14	49504051	49504533	+	0.133333	NA	Intergenic	MamRep564|Unknown|Unknown	82088	NM_001030001	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29|uS14	ribosomal protein S29	protein-coding
24.9-12	chr6	82204256	82204555	+	0.133333	NA	intron (NM_015525, intron 17 of 28).2	intron (NM_015525, intron 17 of 28).2	43339	NM_001300906	25998	Hs.306425	NM_015525	ENSG00000005700	IBTK	BTBD26|BTKI	inhibitor of Bruton tyrosine kinase	protein-coding
23.8666-8	chr9	95610180	95610427	+	0.133333	NA	Intergenic	L1ME3G|LINE|L1	-93246	NM_001354919	5727	Hs.494538	NM_000264	ENSG00000185920	PTCH1	BCNS|NBCCS|PTC|PTC1|PTCH	patched 1	protein-coding
49-7	chr4	45753521	45754078	+	0.133333	NA	Intergenic	L1M4|LINE|L1	370255	NM_173536	2565	Hs.375051	NM_173536	ENSG00000163285	GABRG1	-	gamma-aminobutyric acid type A receptor gamma1 subunit	protein-coding
35.0666-2	chr1	189663936	189664291	+	0.133333	NA	Intergenic	Intergenic	811897	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
23.3333-7	chr2	155710478	155710784	+	0.133333	NA	Intergenic	Intergenic	544300	NR_110249	101929378	Hs.171192	NR_110249	ENSG00000226383	LINC01876	-	long intergenic non-protein coding RNA 1876	ncRNA
41.9999-2	chr20	22301441	22301855	+	0.133333	NA	Intergenic	L3|LINE|CR1	-18847	NR_110615	101929663	Hs.143562	NR_110615	ENSG00000225321	LINC01427	-	long intergenic non-protein coding RNA 1427	ncRNA
20.5667-10	chr6	65463685	65464004	+	0.133333	NA	intron (NM_198283, intron 4 of 9)	MER85|DNA|PiggyBac	115960	NM_198283	346007	Hs.25067	NM_198283	ENSG00000188107	EYS	C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1	eyes shut homolog	protein-coding
32.6333-7	chr8	142423494	142423881	+	0.133333	NA	Intergenic	Intergenic	-20505	NM_145003	203062	Hs.370931	NM_145003	ENSG00000171045	TSNARE1	-	t-SNARE domain containing 1	protein-coding
40.7666-3	chr8	103824626	103824998	+	0.133333	NA	intron (NR_145711, intron 1 of 21)	intron (NR_145711, intron 1 of 21)	5592	NM_001348508	9699	Hs.655271	NM_014677	ENSG00000176406	RIMS2	OBOE|RAB3IP3|RIM2	regulating synaptic membrane exocytosis 2	protein-coding
26-2	chr10	51485165	51485526	+	0.133333	NA	intron (NM_001098512, intron 3 of 17)	intron (NM_001098512, intron 3 of 17)	185772	NR_030336	693190		NR_030336	ENSG00000207813	MIR605	MIRN605|hsa-mir-605|mir-605	microRNA 605	ncRNA
21-12	chr8	88044068	88044371	+	0.133333	NA	intron (NM_005941, intron 9 of 9)	FLAM_C|SINE|Alu	-170204	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
51.8999-2	chr3	148273938	148274479	+	0.133333	NA	Intergenic	MER67D|LTR|ERV1	-6683	NR_146712	105374149	Hs.274837	NR_146712		LINC02046	-	long intergenic non-protein coding RNA 2046	ncRNA
35.6666-2	chr20	44156445	44156864	+	0.133333	NA	intron (NM_020433, intron 2 of 5)	MLT1A1|LTR|ERVL-MaLR	30534	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding
24.9666	chr14	32597622	32597989	+	0.133333	NA	intron (NM_004274, intron 5 of 13)	intron (NM_004274, intron 5 of 13)	268507	NM_004274	9472	Hs.509083	NM_004274	ENSG00000151320	AKAP6	ADAP100|ADAP6|AKAP100|PRKA6|mAKAP	A-kinase anchoring protein 6	protein-coding
40.0999-3	chr6	24414894	24415475	+	0.133333	NA	intron (NR_104423, intron 5 of 9)	intron (NR_104423, intron 5 of 9)	12248	NM_020662	57380	Hs.658612	NM_020662	ENSG00000124532	MRS2	HPT|MRS2L	magnesium transporter MRS2	protein-coding
27.1-6	chr2	226264635	226265294	+	0.133333	NA	Intergenic	L2a|LINE|L2	122170	NR_046102	646736	Hs.712836	NR_046102		LOC646736	-	uncharacterized LOC646736	ncRNA
26.0333-11	chr7	93819851	93820250	+	0.133333	NA	Intergenic	Intergenic	70703	NM_006528	7980	Hs.438231	NM_006528	ENSG00000105825	TFPI2	PP5|REF1|TFPI-2	tissue factor pathway inhibitor 2	protein-coding
40.1999	chr1	100901274	100901732	+	0.133333	NA	intron (NM_133496, intron 2 of 10)	AluSx|SINE|Alu	5413	NM_133496	148867	Hs.533903	NM_133496	ENSG00000162695	SLC30A7	ZNT7|ZnT-7|ZnTL2	solute carrier family 30 member 7	protein-coding
34.6-7	chr20	4433573	4433934	+	0.133333	NA	Intergenic	Intergenic	-184466	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding
28.3333-5	chr15	26042748	26043109	+	0.133333	NA	intron (NR_040082, intron 2 of 4)	MLT2F|LTR|ERVL	-72885	NR_038852	503519	Hs.371380	NR_038851	ENSG00000259150	LINC00929	-	long intergenic non-protein coding RNA 929	ncRNA
26.5-6	chr2	127400815	127401187	+	0.133333	NA	Intergenic	CpG	-17419	NM_000312	5624	Hs.224698	NM_000312	ENSG00000115718	PROC	APC|PC|PROC1|THPH3|THPH4	protein C, inactivator of coagulation factors Va and VIIIa	protein-coding
51.7999	chr2	115572191	115572846	+	0.133333	NA	intron (NM_001321912, intron 6 of 25)	(AT)n|Simple_repeat|Simple_repeat	228703	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
57.3332	chr9	116017885	116018381	+	0.133333	NA	Intergenic	L1MA9|LINE|L1	-92926	NR_024032	58483	Hs.23367	NR_024032	ENSG00000204148	LINC00474	C9orf27|EST-YD1	long intergenic non-protein coding RNA 474	ncRNA
31.6333-5	chr17	5385743	5386265	+	0.133333	NA	3' UTR (NM_001320653, exon 17 of 17)	3' UTR (NM_001320653, exon 17 of 17)	-33637	NR_027683	84268	Hs.462086	NM_032308	ENSG00000129197	RPAIN	HRIP|RIP	RPA interacting protein	protein-coding
46.9333-3	chr14	70170419	70170959	+	0.133333	NA	intron (NM_033262, intron 1 of 7)	intron (NM_033262, intron 1 of 7)	-16419	NR_135825	646548		NR_135825		LOC646548	-	ADAM metallopeptidase domain 20 pseudogene	pseudo
14.1333-13	chr9	69135301	69135479	+	0.133333	NA	intron (NM_001369871, intron 1 of 24)	MIR|SINE|MIR	12375	NM_001369871	9414	Hs.50382	NM_004817	ENSG00000119139	TJP2	C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2	tight junction protein 2	protein-coding
33.0999-2	chrX	57891412	57892011	+	0.133333	NA	Intergenic	L1PB4|LINE|L1	18922	NM_007156	7789	Hs.550094	NM_007156	ENSG00000198205	ZXDA	ZNF896	zinc finger X-linked duplicated A	protein-coding
45-4	chr2	218481414	218481970	+	0.133333	NA	intron (NM_020935, intron 17 of 25)	AluJo|SINE|Alu	62569	NM_007127	7429	Hs.654595	NM_007127	ENSG00000127831	VIL1	D2S1471|VIL	villin 1	protein-coding
24-14	chr4	81948471	81948825	+	0.133333	NA	Intergenic	Intergenic	425343	NM_031370	3184	Hs.480073	NM_002138	ENSG00000138668	HNRNPD	AUF1|AUF1A|HNRPD|P37|hnRNPD0	heterogeneous nuclear ribonucleoprotein D	protein-coding
21.4666-4	chr6	136395183	136395595	+	0.133333	NA	intron (NM_001198611, intron 3 of 16)	L1MA4|LINE|L1	71486	NM_001198615	9053	Hs.486548	NM_003980	ENSG00000135525	MAP7	E-MAP-115|EMAP115	microtubule associated protein 7	protein-coding
26.2-27	chr9	35353951	35354213	+	0.133333	NA	intron (NM_001371187, intron 2 of 32)	intron (NM_001371187, intron 2 of 32)	12186	NM_001371187								
46.2666	chr12	113508856	113509353	+	0.133333	NA	Intergenic	Intergenic	37101	NR_126425	104355219	Hs.641707	NR_126425		LHX5-AS1	locus 4010|locus4010	LHX5 antisense RNA 1	ncRNA
31.6666-6	chr3	53889740	53890077	+	0.133333	NA	intron (NM_021237, intron 1 of 4)	intron (NM_021237, intron 1 of 4)	1951	NM_021237	58515	Hs.58471	NM_021237	ENSG00000113811	SELENOK	HSPC030|HSPC297|SELK	selenoprotein K	protein-coding
39.3333-10	chr9	114479810	114480380	+	0.133333	NA	intron (NM_015404, intron 1 of 11)	AluSx1|SINE|Alu	23120	NM_001083885	25861	Hs.93836	NM_015404	ENSG00000095397	WHRN	CIP98|DFNB31|PDZD7B|USH2D|WI	whirlin	protein-coding
15.4-11	chr15	94530254	94530392	+	0.133333	NA	Intergenic	Intergenic	174393	NM_001159644	55784	Hs.33368	NM_018349	ENSG00000140563	MCTP2	-	multiple C2 and transmembrane domain containing 2	protein-coding
21.9333-9	chr2	133709555	133709768	+	0.133333	NA	Intergenic	Intergenic	-141198	NM_207363	344148	Hs.537329	NM_207363	ENSG00000176771	NCKAP5	ERIH1|ERIH2|NAP5	NCK associated protein 5	protein-coding
22.4666	chr1	245964727	245965154	+	0.133333	NA	intron (NM_022743, intron 5 of 11)	L1MC1|LINE|L1	452472	NM_022743	64754	Hs.567571	NM_022743	ENSG00000185420	SMYD3	KMT3E|ZMYND1|ZNFN3A1|bA74P14.1	SET and MYND domain containing 3	protein-coding
29-11	chr5	90010179	90010586	+	0.133333	NA	Intergenic	Intergenic	6338	NR_037433	100500825		NR_037433	ENSG00000264342	MIR3660	mir-3660	microRNA 3660	ncRNA
26.0999-2	chr8	129320316	129320511	+	0.133333	NA	Intergenic	Intergenic	-79173	NR_033916	728724	Hs.49902	NR_033916	ENSG00000229140	LINC00977	-	long intergenic non-protein coding RNA 977	ncRNA
16.0667-8	chr19	7407487	7407702	+	0.133333	NA	intron (NM_015318, intron 1 of 20)	intron (NM_015318, intron 1 of 20)	12449	NM_015318	23370	Hs.465761	NM_015318	ENSG00000104880	ARHGEF18	P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF	Rho/Rac guanine nucleotide exchange factor 18	protein-coding
32.3666-6	chr2	198816480	198816982	+	0.133333	NA	Intergenic	Intergenic	-441634	NR_110267	101927619	Hs.632942	NR_110267		LINC01923	-	long intergenic non-protein coding RNA 1923	ncRNA
15.1666	chr5	81996774	81996887	+	0.133333	NA	intron (NM_031482, intron 2 of 7)	MIR|SINE|MIR	24807	NM_031482	83734	Hs.713698	NM_031482	ENSG00000152348	ATG10	APG10|APG10L|pp12616	autophagy related 10	protein-coding
18.9-13	chr5	16519547	16519844	+	0.133333	NA	intron (NM_001034850, intron 3 of 8)	intron (NM_001034850, intron 3 of 8)	-10697	NM_019000	54463	Hs.481704	NM_019000	ENSG00000154153	RETREG1	FAM134B|JK-1|JK1	reticulophagy regulator 1	protein-coding
15.5-5	chr2	172292808	172293110	+	0.133333	NA	Intergenic	Intergenic	-134377	NM_001316306	3655	Hs.133397	NM_000210	ENSG00000091409	ITGA6	CD49f|ITGA6B|VLA-6	integrin subunit alpha 6	protein-coding
34.5333-5	chr19	39452253	39452606	+	0.133333	NA	intron (NM_001111020, intron 2 of 29)	L2-3_Crp|LINE|L2	6781	NM_003169	6829	Hs.631604	NM_003169	ENSG00000196235	SUPT5H	SPT5|SPT5H|Tat-CT1	SPT5 homolog, DSIF elongation factor subunit	protein-coding
38.1666	chr12	65452161	65452522	+	0.133333	NA	intron (NM_001031679, intron 5 of 6)	intron (NM_001031679, intron 5 of 6)	104970	NR_135033	105369187	Hs.738044	NR_135033	ENSG00000250748	LOC105369187	-	uncharacterized LOC105369187	ncRNA
39.5333-4	chr7	71528041	71528606	+	0.133333	NA	intron (NM_022479, intron 5 of 10)	intron (NM_022479, intron 5 of 10)	-220553	NR_037477	100500836		NR_037477	ENSG00000265878	MIR3914-1	-	microRNA 3914-1	ncRNA
17.2-12	chr8	50081017	50081185	+	0.133333	NA	intron (NR_135798, intron 1 of 15)	L1ME1|LINE|L1	-83030	NM_001321778	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
14.4-18	chr8	144553555	144553702	+	0.133333	NA	intron (NM_025251, intron 3 of 10)	intron (NM_025251, intron 3 of 10)	-24517	NM_001001795	414919	Hs.105685	NM_001001795	ENSG00000213563	C8orf82	-	chromosome 8 open reading frame 82	protein-coding
34.8-11	chr9	73302655	73303097	+	0.133333	NA	Intergenic	Intergenic	151011	NM_000700	301	Hs.494173	NM_000700	ENSG00000135046	ANXA1	ANX1|LPC1	annexin A1	protein-coding
24.8666-2	chr3	169291387	169291891	+	0.133333	NA	intron (NM_001205194, intron 1 of 15)	intron (NM_001205194, intron 1 of 15)	-144168	NM_001366470	2122	Hs.656395	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding
17.2	chr1	33750729	33751031	+	0.133333	NA	intron (NM_052896, intron 13 of 69)	L1M6|LINE|L1	-109595	NM_145205	127540	Hs.568628	NM_145205	ENSG00000176256	HMGB4	dJ1007G16.5	high mobility group box 4	protein-coding
42.7666	chr12	130936734	130937375	+	0.133333	NA	Intergenic	MLT2B3|LTR|ERVL	-16853	NM_001330497	283383	Hs.719239	NM_198827	ENSG00000111452	ADGRD1	GPR133|PGR25	adhesion G protein-coupled receptor D1	protein-coding
38.0333-2	chr20	55407365	55407844	+	0.133333	NA	Intergenic	L1MA3|LINE|L1	-15439	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA
41.0999-2	chr7	39654240	39654593	+	0.133333	NA	intron (NM_005402, intron 1 of 4)	L3|LINE|CR1	30844	NM_005402	5898	Hs.6906	NM_005402	ENSG00000006451	RALA	RAL	RAS like proto-oncogene A	protein-coding
43.2333-2	chr2	79617895	79618380	+	0.133333	NA	intron (NM_001282598, intron 1 of 17)	intron (NM_001282598, intron 1 of 17)	31222	NR_036231	100422888		NR_036231	ENSG00000266436	MIR4264	-	microRNA 4264	ncRNA
24.4-8	chr13	86478423	86478717	+	0.133333	NA	Intergenic	Intergenic	-433350	NR_132371	106144533	Hs.525107	NR_132371		LINC00430	-	long intergenic non-protein coding RNA 430	ncRNA
30.1333-11	chr7	14350511	14350921	+	0.133333	NA	intron (NM_001350717, intron 20 of 24)	MamRTE1|LINE|RTE-BovB	-359291	NM_001163148	2115	Hs.22634	NM_004956	ENSG00000006468	ETV1	ER81	ETS variant 1	protein-coding
18.5333-3	chr10	63402983	63403185	+	0.133333	NA	intron (NM_001322258, intron 1 of 24)	intron (NM_001322258, intron 1 of 24)	-27491	NR_134312	105378330	Hs.602852	NR_134312		LOC105378330	-	uncharacterized LOC105378330	ncRNA
26.3333-4	chr2	54360140	54360581	+	0.133333	NA	exon (NM_001100396, exon 5 of 5)	exon (NM_001100396, exon 5 of 5)	29476	NM_001369401	129852	Hs.732626	NM_173486	ENSG00000177994	C2orf73	-	chromosome 2 open reading frame 73	protein-coding
42.8332-2	chr7	5098355	5098838	+	0.133333	NA	Intergenic	AluSz|SINE|Alu	26536	NR_015343	389458	Hs.733005	NM_203393	ENSG00000273313	RBAKDN	-	RBAK downstream neighbor	ncRNA
27.6333-9	chr5	166688726	166688990	+	0.133333	NA	Intergenic	Tigger3a|DNA|TcMar-Tigger	237512	NR_108020	102557615		NR_108020	ENSG00000254130	LINC01947	CTB-7E3.1	long intergenic non-protein coding RNA 1947	ncRNA
23.9333-9	chr3	73946230	73946486	+	0.133333	NA	Intergenic	Intergenic	137114	NR_146637	105377165		NR_146637		LINC02005	-	long intergenic non-protein coding RNA 2005	ncRNA
21-3	chr15	81638206	81638554	+	0.133333	NA	Intergenic	LTR16A1|LTR|ERVL	-264167	NM_001080532	342125	Hs.253489	NM_181841	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding
22.9333-10	chr3	132493028	132493298	+	0.133333	NA	intron (NM_001329126, intron 34 of 56)	MIR|SINE|MIR	75661	NM_015268	23317	Hs.12707	NM_015268	ENSG00000138246	DNAJC13	PARK21|RME8	DnaJ heat shock protein family (Hsp40) member C13	protein-coding
33.7333-4	chr19	29354937	29355231	+	0.133333	NA	intron (NR_040029, intron 9 of 9)	THE1D|LTR|ERVL-MaLR	-141933	NM_006003	7386	Hs.743307	NM_006003	ENSG00000169021	UQCRFS1	RIP1|RIS1|RISP|UQCR5	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	protein-coding
33.2-9	chr3	6426154	6426688	+	0.133333	NA	Intergenic	MER41B|LTR|ERV1	379028	NR_110125	101927347	Hs.333345	NR_110123	ENSG00000226258	GRM7-AS3	-	GRM7 antisense RNA 3	ncRNA
45.3332	chr9	137261234	137261855	+	0.133333	NA	intron (NM_015456, intron 4 of 12)	AluSx1|SINE|Alu	6217	NM_015456	25920	Hs.521809	NM_015456	ENSG00000188986	NELFB	COBRA1|NELF-B	negative elongation factor complex member B	protein-coding
22.4667-4	chr17	81350960	81351287	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	34002	NM_001347841	100130370	Hs.646594	NM_001272086		LOC100130370	-	uncharacterized LOC100130370	protein-coding
47.4-2	chr4	55821797	55822534	+	0.133333	NA	intron (NM_001351574, intron 1 of 2)	intron (NM_001351574, intron 1 of 2)	2162	NM_001351574	644145	Hs.570825	NM_001351574	ENSG00000250821	EXOC1L	-	exocyst complex component 1 like	protein-coding
47.6-7	chr9	8208933	8209631	+	0.133333	NA	Intergenic	Intergenic	-409504	NM_001318058	90871	Hs.7517	NM_033428	ENSG00000137038	DMAC1	C9orf123|TMEM261	distal membrane arm assembly complex 1	protein-coding
41.5666-4	chr4	32638341	32638879	+	0.133333	NA	Intergenic	Intergenic	287572	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
21.5-2	chr11	88155942	88156125	+	0.133333	NA	intron (NM_022337, intron 1 of 2)	L1PA16|LINE|L1	19410	NM_022337	23682	Hs.591975	NM_022337	ENSG00000123892	RAB38	NY-MEL-1|rrGTPbp	RAB38, member RAS oncogene family	protein-coding
22.3333-10	chr2	65477547	65477734	+	0.133333	NA	Intergenic	Intergenic	-45041	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding
42.6-5	chr5	62122629	62123047	+	0.133333	NA	Intergenic	Intergenic	-183324	NM_001243952	3796	Hs.558351	NM_004520	ENSG00000068796	KIF2A	CDCBM3|HK2|KIF2	kinesin family member 2A	protein-coding
21.3666	chr10	74707055	74707260	+	0.133333	NA	intron (NM_001369124, intron 9 of 9)	AluJb|SINE|Alu	-118098	NM_001370139	23522	Hs.35758	NM_012330	ENSG00000156650	KAT6B	GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf	lysine acetyltransferase 6B	protein-coding
23.0333-15	chr9	128387556	128388003	+	0.133333	NA	intron (NM_030914, intron 2 of 4)	intron (NM_030914, intron 2 of 4)	-4842	NR_039815	100616335		NR_039815	ENSG00000283335	MIR219B	MIR2964A|hsa-mir-219b|mir-219b	microRNA 219b	ncRNA
12.7-6	chr5	143628810	143628931	+	0.133333	NA	Intergenic	Intergenic	-50990	NR_049829	100846991		NR_049829	ENSG00000266478	MIR5197	-	microRNA 5197	ncRNA
35.6333-3	chr2	198821508	198822144	+	0.133333	NA	Intergenic	AluY|SINE|Alu	-446729	NR_110267	101927619	Hs.632942	NR_110267		LINC01923	-	long intergenic non-protein coding RNA 1923	ncRNA
15.4-12	chr19	31107810	31108140	+	0.133333	NA	Intergenic	Tigger13a|DNA|TcMar-Tigger	-59535	NR_147209	107985312	Hs.211053	NR_147209	ENSG00000267777	LINC01791	-	long intergenic non-protein coding RNA 1791	ncRNA
20.2333-6	chr14	24207916	24208192	+	0.133333	NA	exon (NM_001308067, exon 4 of 4)	exon (NM_001308067, exon 4 of 4)	2358	NM_174944	283629	Hs.314432	NM_174944	ENSG00000139908	TSSK4	C14orf20|STK22E|TSK-4|TSK4|TSSK5	testis specific serine kinase 4	protein-coding
33.7333-3	chr18	23062996	23063560	+	0.133333	NA	Intergenic	LTR36|LTR|ERV1	-71286	NR_023359	91768	Hs.11108	NM_138375	ENSG00000134508	CABLES1	CABL1|CABLES|HsT2563|IK3-1	Cdk5 and Abl enzyme substrate 1	protein-coding
41.2-5	chr3	180715673	180716374	+	0.133333	NA	intron (NR_109986, intron 11 of 13)	intron (NR_109986, intron 11 of 13)	-36534	NM_181426	339829	Hs.712820	NM_181426	ENSG00000284862	CCDC39	CILD14|FAP59	coiled-coil domain containing 39	protein-coding
46.7333-2	chr22	40755147	40755775	+	0.133333	NA	Intergenic	MER4D1|LTR|ERV1	58497	NR_039923	100616283		NR_039923	ENSG00000266594	MIR4766	mir-4766	microRNA 4766	ncRNA
37.1-5	chr9	115283855	115284176	+	0.133333	NA	intron (NR_163556, intron 2 of 7)	AluSx1|SINE|Alu	142197	NR_163556	50514	Hs.148841	NM_017418	ENSG00000173077	DEC1	CTS9	deleted in esophageal cancer 1	ncRNA
19.9333-16	chr6	62366964	62367228	+	0.133333	NA	Intergenic	L3|LINE|CR1	-80869	NR_146870	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
21.9-9	chr4	101382838	101383053	+	0.133333	NA	Intergenic	Intergenic	35168	NR_033874	90024	Hs.534513	NR_033874	ENSG00000254531	FLJ20021	-	uncharacterized LOC90024	ncRNA
55.7999	chr2	68658528	68659048	+	0.133333	NA	Intergenic	Intergenic	15200	NM_138964	10887	Hs.683430	NM_138964	ENSG00000169618	PROKR1	GPR73|GPR73a|PK-R1|PKR1|ZAQ	prokineticin receptor 1	protein-coding
36.5-5	chr13	92943800	92944400	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-101241	NR_126360	104326053	Hs.578064	NR_126360		LINC00363	TCONS_00021586	long intergenic non-protein coding RNA 363	ncRNA
33.3	chr12	22052497	22052889	+	0.133333	NA	intron (NR_135117, intron 1 of 6)	intron (NR_135117, intron 1 of 6)	6475	NM_018686	55907	Hs.311346	NM_018686	ENSG00000111726	CMAS	CSS	cytidine monophosphate N-acetylneuraminic acid synthetase	protein-coding
29.4333-8	chr8	61493429	61493926	+	0.133333	NA	intron (NM_173519, intron 5 of 5)	intron (NM_173519, intron 5 of 5)	196134	NM_032467	444	Hs.332422	NM_004318	ENSG00000198363	ASPH	AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin	aspartate beta-hydroxylase	protein-coding
45.1333-2	chr19	31580487	31580970	+	0.133333	NA	Intergenic	AluSx4|SINE|Alu	-7461	NM_001278578	100507527	Hs.432564	NM_001205273		THEG5	-	testis highly expressed protein 5	protein-coding
18.0333-5	chr15	20659437	20659683	+	0.133333	NA	Intergenic	AluSx3|SINE|Alu	96591	NR_027992	606	Hs.657985	NR_027992		NBEAP1	BCL8|BCL8A	neurobeachin pseudogene 1	pseudo
50.0666-2	chr5	41551621	41552222	+	0.133333	NA	Intergenic	L1PREC2|LINE|L1	-41320	NM_001005473	345557	Hs.145404	NM_001005473	ENSG00000182836	PLCXD3	-	phosphatidylinositol specific phospholipase C X domain containing 3	protein-coding
24.9-7	chr2	85004139	85004642	+	0.133333	NA	intron (NM_020122, intron 1 of 6)	AluY|SINE|Alu	33229	NM_020122	56888	Hs.654968	NM_020122	ENSG00000176407	KCMF1	DEBT91|FIGC|PCMF|ZZZ1	potassium channel modulatory factor 1	protein-coding
33.5999-2	chr5	145198628	145198930	+	0.133333	NA	Intergenic	L2a|LINE|L2	636563	NM_182960	153768	Hs.314261	NM_138492	ENSG00000186314	PRELID2	-	PRELI domain containing 2	protein-coding
38.3666	chrX	110426793	110427253	+	0.133333	NA	intron (NM_001171689, intron 1 of 7)	L2c|LINE|L2	7966	NM_020769	57529	Hs.201071	NM_020769	ENSG00000243978	RTL9	MAR9|MART9|RGAG1|SIRH10	retrotransposon Gag like 9	protein-coding
16.7333-20	chr8	103373184	103373322	+	0.133333	NA	intron (NM_001256099, intron 1 of 3)	intron (NM_001256099, intron 1 of 3)	746	NM_001256099	115908	Hs.405614	NM_138455	ENSG00000164932	CTHRC1	-	collagen triple helix repeat containing 1	protein-coding
17.6667-8	chr8	11805309	11805567	+	0.133333	NA	intron (NM_001287745, intron 2 of 8)	MIRb|SINE|MIR	2349	NM_001287748	2222	Hs.593928	NM_004462	ENSG00000079459	FDFT1	DGPT|ERG9|SQS|SQSD|SS	farnesyl-diphosphate farnesyltransferase 1	protein-coding
8.79999	chr17	66198957	66199057	+	0.133333	NA	Intergenic	Intergenic	-6874	NM_001199165	201134	Hs.408676	NM_145036	ENSG00000154240	CEP112	CCDC46|MACOCO	centrosomal protein 112	protein-coding
22.1333-7	chr16	50702271	50702690	+	0.133333	NA	intron (NR_163434, intron 2 of 12)	intron (NR_163434, intron 2 of 12)	3100	NM_001293557	64127	Hs.592072	NM_022162	ENSG00000167207	NOD2	ACUG|BLAU|BLAUS|CARD15|CD|CLR16.3|IBD1|NLRC2|NOD2B|PSORAS1|YAOS	nucleotide binding oligomerization domain containing 2	protein-coding
17-2	chr12	100977705	100977889	+	0.133333	NA	intron (NM_001286616, intron 6 of 26)	L2c|LINE|L2	76151	NM_001286616	121601	Hs.58785	NM_178826	ENSG00000151572	ANO4	TMEM16D	anoctamin 4	protein-coding
25.7333-12	chr6	149464836	149465105	+	0.133333	NA	intron (NM_207360, intron 2 of 5)	intron (NM_207360, intron 2 of 5)	20044	NM_207360	340152	Hs.632618	NM_207360	ENSG00000178199	ZC3H12D	C6orf95|MCPIP4|TFL|dJ281H8.1|p34	zinc finger CCCH-type containing 12D	protein-coding
38.1333-4	chr22	21861422	21862116	+	0.133333	NA	intron (NM_002745, intron 1 of 8)	intron (NM_002745, intron 1 of 8)	5911	NM_002745	5594	Hs.431850	NM_002745	ENSG00000100030	MAPK1	ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK	mitogen-activated protein kinase 1	protein-coding
20.4666-4	chr3	18761732	18761929	+	0.133333	NA	Intergenic	L2a|LINE|L2	-316238	NM_001322874	6304	Hs.517717	NM_002971	ENSG00000182568	SATB1	-	SATB homeobox 1	protein-coding
52.0333-2	chr9	25791828	25792436	+	0.133333	NA	intron (NR_121604, intron 3 of 5)	intron (NR_121604, intron 3 of 5)	12076	NR_121604	101929582	Hs.140547	NR_121604	ENSG00000236306	LINC01241	-	long intergenic non-protein coding RNA 1241	ncRNA
15.6-12	chr7	94720488	94720638	+	0.133333	NA	Intergenic	L1ME1|LINE|L1	64193	NM_001040152	23089	Hs.147492	NM_015068	ENSG00000242265	PEG10	EDR|HB-1|MEF3L|Mar2|Mart2|RGAG3|RTL2|SIRH1	paternally expressed 10	protein-coding
15.3-8	chr5	18315767	18315885	+	0.133333	NA	Intergenic	Intergenic	508552	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
27.3666-3	chr6	8966516	8966758	+	0.133333	NA	Intergenic	L1MEf|LINE|L1	314428	NR_004855	728655	Hs.214343	NR_004855		HULC	HCCAT1|LINC00078|NCRNA00078	hepatocellular carcinoma up-regulated long non-coding RNA	ncRNA
22.2667-3	chr19	17921222	17921594	+	0.133333	NA	Intergenic	Intergenic	-11607	NM_001136203	115098	Hs.100043	NM_138442	ENSG00000007080	CCDC124	-	coiled-coil domain containing 124	protein-coding
16.1333-2	chr1	87205408	87205593	+	0.133333	NA	Intergenic	Intergenic	-7169	NM_001290053	101927844	Hs.694591	NM_001290053		LINC02801	-	long intergenic non-protein coding RNA 2801	protein-coding
18.2666-2	chrX	70746857	70747239	+	0.133333	NA	intron (NM_001003811, intron 10 of 30)	L1M4b|LINE|L1	99247	NR_145758	109617015		NR_145758	ENSG00000280704	SNORD3E	-	small nucleolar RNA, C/D box 3E	snoRNA
18.9667-6	chr4	38485427	38485713	+	0.133333	NA	intron (NR_110951, intron 2 of 7)	intron (NR_110951, intron 2 of 7)	-24197	NR_149076	106144599	Hs.582017	NR_149076	ENSG00000249667	LINC01259	TCONS_00007515	long intergenic non-protein coding RNA 1259	ncRNA
43.6-2	chr17	72651875	72652365	+	0.133333	NA	intron (NM_001352692, intron 7 of 9)	MER58A|DNA|hAT-Charlie	-11648	NR_033876	400619	Hs.447555	NR_033876	ENSG00000227036	LINC00511	LCAL5|onco-lncRNA-12	long intergenic non-protein coding RNA 511	ncRNA
24.6333-8	chr5	30109879	30110374	+	0.133333	NA	Intergenic	L1MEd|LINE|L1	229566	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
21.0666-3	chr5	7601755	7601978	+	0.133333	NA	intron (NM_020546, intron 3 of 24)	MLT1C|LTR|ERVL-MaLR	205728	NM_020546	108	Hs.481545	NM_020546	ENSG00000078295	ADCY2	AC2|HBAC2	adenylate cyclase 2	protein-coding
43.7999-3	chr6	55004872	55005457	+	0.133333	NA	Intergenic	L1PA10|LINE|L1	-101296	NM_001526	3062	Hs.151624	NM_001526	ENSG00000137252	HCRTR2	OX2R	hypocretin receptor 2	protein-coding
22.3333-3	chr10	107207934	107208303	+	0.133333	NA	Intergenic	Intergenic	-43412	NM_001206570	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
41.4	chr13	36062479	36062935	+	0.133333	NA	intron (NM_001330071, intron 3 of 16)	intron (NM_001330071, intron 3 of 16)	68675	NM_001330071	9201	Hs.507755	NM_004734	ENSG00000133083	DCLK1	CL1|CLICK1|DCAMKL1|DCDC3A|DCLK	doublecortin like kinase 1	protein-coding
23.4-5	chr3	73604945	73605207	+	0.133333	NA	intron (NM_015009, intron 2 of 9)	AluSx|SINE|Alu	-18492	NR_046681	101927249	Hs.733334	NR_046681		PDZRN3-AS1	-	PDZRN3 antisense RNA 1	ncRNA
44.7999-2	chr8	80917404	80917882	+	0.133333	NA	Intergenic	LTR51|LTR|ERV1	-42862	NM_001033723	619279	Hs.434957	NM_032651	ENSG00000164684	ZNF704	Gig1	zinc finger protein 704	protein-coding
29.8666-2	chr1	241647683	241648173	+	0.133333	NA	Intergenic	Intergenic	-4353	NM_001367482	128025	Hs.97527	NM_144625	ENSG00000162843	WDR64	-	WD repeat domain 64	protein-coding
24.4-3	chr1	196452417	196452797	+	0.133333	NA	intron (NM_001287820, intron 8 of 26)	LTR33A_|LTR|ERVL	129874	NR_039888	100616363		NR_039888	ENSG00000265986	MIR4735	-	microRNA 4735	ncRNA
25.2333-2	chr1	37454812	37455048	+	0.133333	NA	TTS (NR_038842)	TTS (NR_038842)	19513	NR_038842	728431	Hs.380738	NR_038842	ENSG00000233621	LINC01137	-	long intergenic non-protein coding RNA 1137	ncRNA
29.2667	chr12	99979773	99980204	+	0.133333	NA	intron (NM_152788, intron 1 of 25)	L3|LINE|CR1	4666	NM_001352186	56899	Hs.506458	NM_020140	ENSG00000185046	ANKS1B	AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
31.8-8	chr3	29296790	29297176	+	0.133333	NA	intron (NM_001003792, intron 1 of 13)	intron (NM_001003792, intron 1 of 13)	15671	NM_014483	27303	Hs.221436	NM_014483	ENSG00000144642	RBMS3	-	RNA binding motif single stranded interacting protein 3	protein-coding
18.7333-17	chr3	128268578	128268855	+	0.133333	NA	intron (NM_021937, intron 4 of 6)	MLT1C|LTR|ERVL-MaLR	-114802	NM_001319086	8607	Hs.272822	NM_003707	ENSG00000175792	RUVBL1	ECP-54|ECP54|INO80H|NMP 238|NMP238|PONTIN|Pontin52|RVB1|TIH1|TIP49|TIP49A	RuvB like AAA ATPase 1	protein-coding
19.1333-4	chr17	69940861	69941089	+	0.133333	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	-20732	NR_110874	102723487	Hs.451409	NR_110874	ENSG00000237560	LINC01497	-	long intergenic non-protein coding RNA 1497	ncRNA
26.7333	chr1	51670803	51671157	+	0.133333	NA	intron (NM_148906, intron 2 of 22)	intron (NM_148906, intron 2 of 22)	53888	NM_001350209	114883	Hs.21938	NM_024586	ENSG00000117859	OSBPL9	ORP-9|ORP9	oxysterol binding protein like 9	protein-coding
29.8333	chr2	103424219	103424672	+	0.133333	NA	Intergenic	MER97a|DNA|hAT-Tip100	-440016	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
15.0333-11	chr7	81076256	81076381	+	0.133333	NA	Intergenic	Intergenic	-153929	NM_001350120	10512	Hs.269109	NM_006379	ENSG00000075223	SEMA3C	SEMAE|SemE	semaphorin 3C	protein-coding
15.4-5	chr10	93464562	93464771	+	0.133333	NA	intron (NM_013451, intron 1 of 53)	intron (NM_013451, intron 1 of 53)	17668	NM_013451	26509	Hs.602086	NM_013451	ENSG00000138119	MYOF	FER1L3	myoferlin	protein-coding
12.9333-7	chr2	230335833	230336017	+	0.133333	NA	intron (NM_001352892, intron 2 of 18)	MER41E|LTR|ERV1	8754	NM_138402	93349	Hs.589661	NM_138402	ENSG00000185404	SP140L	-	SP140 nuclear body protein like	protein-coding
31	chr12	59385524	59385911	+	0.133333	NA	Intergenic	L1ME1|LINE|L1	-210312	NM_001270623	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
41.8666-4	chr13	105563618	105564144	+	0.133333	NA	Intergenic	Intergenic	-58200	NR_040247	282706	Hs.558713	NR_040247	ENSG00000232307	DAOA-AS1	DAOA-AS|DAOAAS|G30	DAOA antisense RNA 1	ncRNA
22.9333	chr1	111628191	111628502	+	0.133333	NA	intron (NM_001010935, intron 2 of 8)	intron (NM_001010935, intron 2 of 8)	-7948	NR_160737	107985184		NR_160737		LOC107985184	-	uncharacterized LOC107985184	ncRNA
22.4	chr1	98825277	98825467	+	0.133333	NA	Intergenic	Intergenic	163651	NR_033716	51375	Hs.197015	NM_015976	ENSG00000162627	SNX7	-	sorting nexin 7	protein-coding
20.8333-16	chr8	57119836	57120160	+	0.133333	NA	Intergenic	L1MB7|LINE|L1	-98278	NR_038235	100507651	Hs.371831	NR_038235	ENSG00000253301	LINC01606	-	long intergenic non-protein coding RNA 1606	ncRNA
27.6999	chr17	2925956	2926303	+	0.133333	NA	intron (NM_001330058, intron 3 of 24)	AluSx1|SINE|Alu	39766	NR_110818	101927911	Hs.626373	NR_110818	ENSG00000262884	LOC101927911	-	uncharacterized LOC101927911	ncRNA
19-3	chr11	80204947	80205255	+	0.133333	NA	Intergenic	MIR|SINE|MIR	557702	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
38.1666-2	chr6	62491225	62491573	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	-205172	NR_146870	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
27.7333-7	chr2	120916714	120916965	+	0.133333	NA	intron (NM_005270, intron 2 of 13)	intron (NM_005270, intron 2 of 13)	124558	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding
37.9333-2	chr17	54645802	54646333	+	0.133333	NA	Intergenic	L1MA2|LINE|L1	-254624	NM_001321175	10040	Hs.153504	NM_005486	ENSG00000141198	TOM1L1	SRCASM	target of myb1 like 1 membrane trafficking protein	protein-coding
21.4666-2	chr14	21168647	21168849	+	0.133333	NA	Intergenic	L1PREC2|LINE|L1	-12685	NM_001004731	390445	Hs.553768	NM_001004731	ENSG00000169327	OR5AU1	OR14-38	olfactory receptor family 5 subfamily AU member 1	protein-coding
44-4	chr3	65535721	65536246	+	0.133333	NA	intron (NM_001365904, intron 2 of 24)	MamRep137|DNA|TcMar-Tigger	-357833	NR_046575	100873983	Hs.663889	NR_046575	ENSG00000240175	MAGI1-AS1	-	MAGI1 antisense RNA 1	ncRNA
35.2-5	chr2	23688212	23688660	+	0.133333	NA	intron (NM_052920, intron 6 of 13)	intron (NM_052920, intron 6 of 13)	238687	NM_001242338	54454	Hs.467862	NM_017552	ENSG00000119778	ATAD2B	-	ATPase family AAA domain containing 2B	protein-coding
32.7333-9	chr7	36007468	36007839	+	0.133333	NA	Intergenic	Intergenic	-87657	NR_108089	101928618	Hs.561704	NR_108089	ENSG00000261184	LOC101928618	-	uncharacterized LOC101928618	ncRNA
17.1333-4	chr12	31360239	31360449	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	8957	NR_146469	101929027	Hs.266041	NR_146469	ENSG00000256232	LINC02387	-	long intergenic non-protein coding RNA 2387	ncRNA
20.5333-5	chr15	50789215	50789443	+	0.133333	NA	Intergenic	AluY|SINE|Alu	-23623	NM_032802	84888	Hs.401537	NM_032802	ENSG00000138600	SPPL2A	IMP3|PSL2	signal peptide peptidase like 2A	protein-coding
32.4666-4	chr6	156760736	156761111	+	0.133333	NA	Intergenic	(GTGATGT)n|Simple_repeat|Simple_repeat	-16932	NM_001346813	57492	Hs.291587	NM_017519	ENSG00000049618	ARID1B	6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R	AT-rich interaction domain 1B	protein-coding
26.2-4	chr11	123115652	123115949	+	0.133333	NA	intron (NM_024769, intron 1 of 6)	MLT1F2|LTR|ERVL-MaLR	-53664	NM_153201	3312	Hs.180414	NM_006597	ENSG00000109971	HSPA8	HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71	heat shock protein family A (Hsp70) member 8	protein-coding
20.7667-11	chr6	66598684	66598949	+	0.133333	NA	Intergenic	Intergenic	810937	NR_026540	442229	Hs.390414	NR_026540		SLC25A51P1	MCART3P|bA707M13.1	SLC25A51 pseudogene 1	pseudo
18.4666-7	chr6	101797862	101798000	+	0.133333	NA	intron (NM_001166247, intron 6 of 16)	L1ME4a|LINE|L1	398946	NM_001166247	2898	Hs.98262	NM_021956	ENSG00000164418	GRIK2	EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6	glutamate ionotropic receptor kainate type subunit 2	protein-coding
43.8-6	chr7	94960565	94961083	+	0.133333	NA	intron (NM_017650, intron 2 of 15)	intron (NM_017650, intron 2 of 15)	50926	NM_001166163	55607	Hs.21816	NM_017650	ENSG00000158528	PPP1R9A	NRB1|NRBI|Neurabin-I	protein phosphatase 1 regulatory subunit 9A	protein-coding
14.5666-2	chr6	143746485	143746636	+	0.133333	NA	intron (NM_001100165, intron 2 of 11)	intron (NM_001100165, intron 2 of 11)	68595	NM_001100164	9749	Hs.102471	NM_014721	ENSG00000112419	PHACTR2	C6orf56	phosphatase and actin regulator 2	protein-coding
51.8333	chr14	64654585	64655193	+	0.133333	NA	Intergenic	Intergenic	-49535	NM_001308147	26030	Hs.509637	NM_015549	ENSG00000126822	PLEKHG3	ARHGEF43|KIAA0599	pleckstrin homology and RhoGEF domain containing G3	protein-coding
28.8999-2	chr16	73332170	73332386	+	0.133333	NA	Intergenic	Intergenic	-54527	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA
22.6666-4	chr4	87256864	87257156	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-36392	NM_001292007	57563	Hs.106601	NM_020803	ENSG00000145332	KLHL8	-	kelch like family member 8	protein-coding
25.2667-12	chr5	160017000	160017308	+	0.133333	NA	intron (NM_003314, intron 2 of 7)	intron (NM_003314, intron 2 of 7)	8015	NM_003314	7265	Hs.519718	NM_003314	ENSG00000113312	TTC1	TPR1	tetratricopeptide repeat domain 1	protein-coding
19.7333-6	chr7	22831037	22831261	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	-8300	NM_019059	54543	Hs.112318	NM_019059	ENSG00000196683	TOMM7	TOM7	translocase of outer mitochondrial membrane 7	protein-coding
66.2665	chr8	119257427	119257939	+	0.133333	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-10826	NR_149112	105375726	Hs.666095	NR_149111		MAL2-AS1	-	MAL2 antisense RNA 1	ncRNA
33.4667-9	chr8	81502415	81502735	+	0.133333	NA	Intergenic	Intergenic	-19342	NM_001442	2167	Hs.391561	NM_001442	ENSG00000170323	FABP4	A-FABP|AFABP|ALBP|HEL-S-104|aP2	fatty acid binding protein 4	protein-coding
30.2667	chr1	216216448	216216839	+	0.133333	NA	intron (NM_206933, intron 15 of 71)	intron (NM_206933, intron 15 of 71)	144178	NR_125992	102723833	Hs.232072	NR_125992	ENSG00000233620	LOC102723833	-	uncharacterized LOC102723833	ncRNA
23.9333-4	chr10	30136008	30136270	+	0.133333	NA	Intergenic	AluJo|SINE|Alu	-20645	NM_001350021	57608	Hs.533953	NM_020848	ENSG00000165757	JCAD	KIAA1462	junctional cadherin 5 associated	protein-coding
52.6333-5	chr7	89934411	89935271	+	0.133333	NA	intron (NR_110029, intron 2 of 2)	intron (NR_110029, intron 2 of 2)	-184559	NR_003551	442523	Hs.406964	NR_003551	ENSG00000235436	DPY19L2P4	-	DPY19L2 pseudogene 4	pseudo
15.6333-17	chr8	117845261	117845507	+	0.133333	NA	intron (NM_000127, intron 1 of 10)	intron (NM_000127, intron 1 of 10)	75529	NR_145799	109623457		NR_145799		SNORD168	-	small nucleolar RNA, C/D box 168	snoRNA
29.6666-5	chr4	58534744	58535060	+	0.133333	NA	intron (NR_133943, intron 1 of 2)	L1MA2|LINE|L1	1426	NR_133943	105377671	Hs.225045	NR_133943	ENSG00000250340	LINC02494	-	long intergenic non-protein coding RNA 2494	ncRNA
10.9333-4	chr10	75822230	75822347	+	0.133333	NA	intron (NM_032024, intron 1 of 5)	L1PB4|LINE|L1	39527	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	LRMDA	C10orf11|CDA017	leucine rich melanocyte differentiation associated	protein-coding
40.0666-4	chr5	14207777	14208171	+	0.133333	NA	intron (NM_007118, intron 1 of 56)	L1ME1|LINE|L1	64632	NM_007118	7204	Hs.130031	NM_007118	ENSG00000038382	TRIO	ARHGEF23|MEBAS|MRD44|tgat	trio Rho guanine nucleotide exchange factor	protein-coding
32.6666	chr11	23676522	23676862	+	0.133333	NA	Intergenic	Tigger17a|DNA|TcMar-Tigger	-257502	NR_107021	102465860		NR_107021	ENSG00000275868	MIR8054	hsa-mir-8054	microRNA 8054	ncRNA
27.2666-7	chr7	96787352	96787594	+	0.133333	NA	Intergenic	Intergenic	-77582	NM_006304	7979	Hs.489201	NM_006304	ENSG00000127922	SEM1	C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1	SEM1 26S proteasome complex subunit	protein-coding
47.9332	chr10	116605400	116605842	+	0.133333	NA	intron (NM_006229, intron 12 of 12)	intron (NM_006229, intron 12 of 12)	14608	NM_001303135	5407	Hs.73923	NM_006229	ENSG00000187021	PNLIPRP1	PLRP1	pancreatic lipase related protein 1	protein-coding
32.2666	chr1	89954193	89954650	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	40545	NR_002830	492303	Hs.550796	NR_002830		GEMIN8P4	-	gem nuclear organelle associated protein 8 pseudogene 4	pseudo
33.4-6	chr2	181203737	181204377	+	0.133333	NA	intron (NR_130784, intron 1 of 4)	intron (NR_130784, intron 1 of 4)	80220	NR_130784	101927156	Hs.580074	NR_130784		LINC01934	-	long intergenic non-protein coding RNA 1934	ncRNA
28.2333-14	chr8	121805921	121806236	+	0.133333	NA	Intergenic	Intergenic	-164638	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
32.2333-5	chr2	161681590	161682043	+	0.133333	NA	intron (NM_001354451, intron 1 of 25)	intron (NM_001354451, intron 1 of 25)	57400	NM_001354449	57282	Hs.333958	NM_022058	ENSG00000144290	SLC4A10	NBCn2|NCBE	solute carrier family 4 member 10	protein-coding
23.2666	chr14	80435921	80436152	+	0.133333	NA	intron (NR_038355, intron 8 of 8)	L1M1|LINE|L1	-204979	NM_000793	1734	Hs.202354	NM_000793	ENSG00000211448	DIO2	5DII|D2|DIOII|SelY|TXDI2	iodothyronine deiodinase 2	protein-coding
36.1333-5	chr3	5388612	5389059	+	0.133333	NA	Intergenic	L1MC3|LINE|L1	-138580	NR_039953	100616334		NR_039953	ENSG00000265180	MIR4790	-	microRNA 4790	ncRNA
28.2667-8	chr7	11499524	11499902	+	0.133333	NA	intron (NM_015204, intron 6 of 26)	L1PA12|LINE|L1	332485	NM_015204	221981	Hs.120855	NM_015204	ENSG00000005108	THSD7A	-	thrombospondin type 1 domain containing 7A	protein-coding
26.6-10	chr20	34231591	34231956	+	0.133333	NA	Intergenic	L1M5|LINE|L1	-28592	NM_001672	434	Hs.659995	NM_001672	ENSG00000101440	ASIP	AGSW|AGTI|AGTIL|ASP|SHEP9	agouti signaling protein	protein-coding
34.8666-3	chr3	190073767	190074161	+	0.133333	NA	intron (NM_001134418, intron 1 of 14)	intron (NM_001134418, intron 1 of 14)	46933	NM_018192	55214	Hs.374191	NM_018192	ENSG00000090530	P3H2	LEPREL1|MCVD|MLAT4	prolyl 3-hydroxylase 2	protein-coding
50.7666-2	chr3	1557253	1557720	+	0.133333	NA	Intergenic	Intergenic	464462	NM_001349356	27255	Hs.387300	NM_014461	ENSG00000134115	CNTN6	NB3	contactin 6	protein-coding
25.5666-2	chr14	30184634	30185025	+	0.133333	NA	Intergenic	Intergenic	-256982	NM_001330069	5587	Hs.508999	NM_002742	ENSG00000184304	PRKD1	CHDED|PKC-MU|PKCM|PKD|PRKCM	protein kinase D1	protein-coding
18.2667-5	chr14	27204846	27205072	+	0.133333	NA	Intergenic	Intergenic	296317	NR_036193	100423019		NR_036193	ENSG00000265165	MIR4307	-	microRNA 4307	ncRNA
21-14	chr9	124677524	124677841	+	0.133333	NA	intron (NR_038975, intron 1 of 1)	L1ME3|LINE|L1	-14760	NR_029611	406954		NR_029611	ENSG00000207595	MIR181A2	MIRN181A|MIRN181A2|hsa-mir-181a-2|mir-181a-2	microRNA 181a-2	ncRNA
34.0666-3	chr16	86774570	86774862	+	0.133333	NA	Intergenic	ERVL-int|LTR|ERVL	52625	NR_135182	102724344	Hs.585769	NR_135182	ENSG00000261175	LINC02188	-	long intergenic non-protein coding RNA 2188	ncRNA
27.4667-9	chr3	127844000	127844366	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	-20933	NM_001003794	11343	Hs.277035	NM_007283	ENSG00000074416	MGLL	HU-K5|HUK5|MAGL|MGL	monoglyceride lipase	protein-coding
21.0333-2	chr11	15320336	15320493	+	0.133333	NA	Intergenic	Intergenic	171312	NM_001278315	387755	Hs.591997	NM_001031853	ENSG00000188487	INSC	-	INSC spindle orientation adaptor protein	protein-coding
24.9-8	chr2	122596553	122596776	+	0.133333	NA	Intergenic	Intergenic	476817	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
28.1333-12	chr7	100487850	100488132	+	0.133333	NA	intron (NM_173564, intron 3 of 6)	AluJr|SINE|Alu	4064	NM_173564	222950	Hs.320086	NM_173564	ENSG00000166924	NYAP1	C7orf51	neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1	protein-coding
33.4333-3	chr14	62386651	62387087	+	0.133333	NA	Intergenic	THE1D-int|LTR|ERVL-MaLR	-246896	NR_104063	101954204	Hs.607093	NR_104063	ENSG00000259142	LINC00644	-	long intergenic non-protein coding RNA 644	ncRNA
43.5999-2	chr2	77065882	77066246	+	0.133333	NA	intron (NR_146416, intron 1 of 1)	intron (NR_146416, intron 1 of 1)	80099	NR_110284	101927907	Hs.382185	NR_110284	ENSG00000234653	LOC101927907	-	uncharacterized LOC101927907	ncRNA
25.8333-7	chr2	129543833	129544241	+	0.133333	NA	Intergenic	L1MEc|LINE|L1	-270146	NR_122040	151121	Hs.531687	NM_001033657	ENSG00000204460	LINC01854	-	long intergenic non-protein coding RNA 1854	ncRNA
24.9666-2	chr21	31267557	31267951	+	0.133333	NA	intron (NM_001353692, intron 3 of 27)	intron (NM_001353692, intron 3 of 27)	76600	NM_001353687	7074	Hs.517228	NM_003253	ENSG00000156299	TIAM1	TIAM-1	T cell lymphoma invasion and metastasis 1	protein-coding
25.4667-2	chr10	119820405	119820726	+	0.133333	NA	intron (NM_001243194, intron 1 of 5)	intron (NM_001243194, intron 1 of 5)	1308	NM_001243194	22876	Hs.369755	NM_014937	ENSG00000198825	INPP5F	MSTP007|MSTPO47|SAC2|hSAC2	inositol polyphosphate-5-phosphatase F	protein-coding
26.2-5	chr12	13988233	13988621	+	0.133333	NA	Intergenic	Intergenic	-8071	NM_000834	2904	Hs.504844	NM_000834	ENSG00000273079	GRIN2B	EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3	glutamate ionotropic receptor NMDA type subunit 2B	protein-coding
14.3333-9	chr8	130340053	130340278	+	0.133333	NA	intron (NM_001362925, intron 3 of 29)	intron (NM_001362925, intron 3 of 29)	-43632	NR_002765	29065	Hs.639318	NR_002765		ASAP1-IT1	ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050	ASAP1 intronic transcript 1	ncRNA
26.5333-16	chr9	34237421	34237769	+	0.133333	NA	intron (NR_033243, intron 4 of 7)	AluJb|SINE|Alu	58552	NM_001171203	51271	Hs.268963	NM_016525	ENSG00000165006	UBAP1	NAG20|SPG80|UAP|UBAP|UBAP-1	ubiquitin associated protein 1	protein-coding
31.5333-5	chr21	32172905	32173503	+	0.133333	NA	Intergenic	L1MB7|LINE|L1	-86909	NR_038033	100551499	Hs.224449	NR_038033		LINC00159	C21orf44|NCRNA00159	long intergenic non-protein coding RNA 159	ncRNA
21.7333-7	chr20	36565735	36565987	+	0.133333	NA	intron (NR_109939, intron 2 of 4)	AluJo|SINE|Alu	7414	NR_109939	101926987	Hs.647444	NR_109939	ENSG00000232907	DLGAP4-AS1	CCAT7	DLGAP4 antisense RNA 1	ncRNA
32.8-2	chr11	21535663	21536028	+	0.133333	NA	intron (NM_001288713, intron 17 of 20)	intron (NM_001288713, intron 17 of 20)	-657240	NM_001142649	203859	Hs.154329	NM_213599	ENSG00000171714	ANO5	GDD1|LGMD2L|LGMDR12|TMEM16E	anoctamin 5	protein-coding
21.1333-16	chr9	31758060	31758304	+	0.133333	NA	Intergenic	L1MA4A|LINE|L1	-376692	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
41.3666-2	chr15	73409061	73409810	+	0.133333	NA	Intergenic	Intergenic	-33729	NM_001348772	283677	Hs.743574	NM_001042367	ENSG00000183324	REC114	C15orf60|CT147	REC114 meiotic recombination protein	protein-coding
37.4333-3	chr12	49010405	49010740	+	0.133333	NA	intron (NR_147178, intron 2 of 2)	HAL1|LINE|L1	8204	NM_001206709	5571	Hs.530862	NM_002733	ENSG00000181929	PRKAG1	AMPKG	protein kinase AMP-activated non-catalytic subunit gamma 1	protein-coding
24.7-13	chr6	119437598	119437867	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	53570	NR_046100	285762	Hs.571063	NR_046100		LOC285762	-	uncharacterized LOC285762	ncRNA
41.7999	chr10	55461389	55461803	+	0.133333	NA	intron (NM_001354404, intron 2 of 34)	intron (NM_001354404, intron 2 of 34)	-137446	NM_001190478	100463289		NM_001190478	ENSG00000249860	MTRNR2L5	HN5	MT-RNR2 like 5	protein-coding
35.9666	chr17	28759850	28760215	+	0.133333	NA	intron (NM_001288635, intron 3 of 3)	intron (NM_001288635, intron 3 of 3)	16021	NM_004295	9618	Hs.8375	NM_004295	ENSG00000076604	TRAF4	CART1|MLN62|RNF83	TNF receptor associated factor 4	protein-coding
35.0666-3	chr10	35459701	35460034	+	0.133333	NA	intron (NM_001282853, intron 2 of 10)	intron (NM_001282853, intron 2 of 10)	122993	NM_001282853	219771	Hs.14745	NM_145012	ENSG00000108100	CCNY	C10orf9|CBCP1|CCNX|CFP1	cyclin Y	protein-coding
27.6-10	chr5	85892518	85892921	+	0.133333	NA	Intergenic	Intergenic	-389725	NR_003719	285622	Hs.449272	NR_003719		NBPF22P	-	NBPF member 22, pseudogene	pseudo
36.4333-4	chr9	70332227	70332656	+	0.133333	NA	intron (NM_015110, intron 17 of 24)	AluJb|SINE|Alu	73463	NM_015110	23137	Hs.534189	NM_015110	ENSG00000198887	SMC5	SMC5L1	structural maintenance of chromosomes 5	protein-coding
36.6666	chr21	29510666	29510977	+	0.133333	NA	Intergenic	Intergenic	14774	NR_146594	54147	Hs.124532	NR_146594	ENSG00000234293	BACH1-IT3	C21orf8|NCRNA00097	BACH1 intronic transcript 3	ncRNA
31.2666-4	chr15	63348842	63349620	+	0.133333	NA	intron (NR_135511, intron 2 of 9)	intron (NR_135511, intron 2 of 9)	32615	NR_135511	771	Hs.210995	NM_001218	ENSG00000074410	CA12	CA-XII|CAXII|HsT18816|T18816	carbonic anhydrase 12	protein-coding
39.1999-2	chr8	135378343	135378804	+	0.133333	NA	Intergenic	ERVL-E-int|LTR|ERVL	-78883	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	KH RNA binding domain containing, signal transduction associated 3	protein-coding
27.1333-9	chr12	117444005	117444315	+	0.133333	NA	Intergenic	MER33|DNA|hAT-Charlie	-82358	NM_001204218	4842	Hs.654410	NM_000620	ENSG00000089250	NOS1	IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS	nitric oxide synthase 1	protein-coding
46.6	chr12	28905533	28906082	+	0.133333	NA	Intergenic	Tigger7|DNA|TcMar-Tigger	-243471	NM_001271783	55711	Hs.684482	NM_018099	ENSG00000064763	FAR2	HEL-S-81|MLSTD1|SDR10E2	fatty acyl-CoA reductase 2	protein-coding
38.2333-2	chr17	81014995	81015520	+	0.133333	NA	Intergenic	L1MEf|LINE|L1	19462	NR_026857	440465	Hs.448889	NM_001004336	ENSG00000226137	BAIAP2-DT	BAIAP2-AS1|lnc-BAIAP2	BAIAP2 divergent transcript	ncRNA
24.2333	chr13	66158930	66159179	+	0.133333	NA	Intergenic	Intergenic	-59196	NR_039853	100616205		NR_039853	ENSG00000263561	MIR4704	-	microRNA 4704	ncRNA
30.7333-9	chr4	162120351	162120808	+	0.133333	NA	intron (NM_001128428, intron 1 of 14)	intron (NM_001128428, intron 1 of 14)	43421	NM_020116	56884	Hs.32452	NM_020116	ENSG00000168843	FSTL5	-	follistatin like 5	protein-coding
21.2333-11	chr7	6515349	6515549	+	0.133333	NA	intron (NM_001145118, intron 7 of 21)	AluSx|SINE|Alu	-31297	NM_001100603	11014	Hs.654552	NM_006854	ENSG00000136240	KDELR2	ELP-1|ERD2.2	KDEL endoplasmic reticulum protein retention receptor 2	protein-coding
23.0667-5	chr14	56326876	56327152	+	0.133333	NA	Intergenic	Intergenic	-187317	NR_135241	101927690	Hs.385477	NR_135241	ENSG00000258803	LOC101927690	-	uncharacterized LOC101927690	ncRNA
26.7333-10	chr5	180303733	180304138	+	0.133333	NA	intron (NM_005110, intron 17 of 18)	MER21C|LTR|ERVL	-11852	NM_139069	5601	Hs.484371	NM_002752	ENSG00000050748	MAPK9	JNK-55|JNK2|JNK2A|JNK2ALPHA|JNK2B|JNK2BETA|PRKM9|SAPK|SAPK1a|p54a|p54aSAPK	mitogen-activated protein kinase 9	protein-coding
23.4667-2	chr12	99302290	99302573	+	0.133333	NA	intron (NM_152788, intron 12 of 25)	intron (NM_152788, intron 12 of 25)	-147341	NM_001352190	56899	Hs.506458	NM_020140	ENSG00000185046	ANKS1B	AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
20.2666-4	chr8	99761968	99762299	+	0.133333	NA	intron (NM_017890, intron 39 of 61)	AluJb|SINE|Alu	131574	NM_004374	1345	Hs.351875	NM_004374	ENSG00000164919	COX6C	-	cytochrome c oxidase subunit 6C	protein-coding
31.7666-2	chr15	83979012	83979555	+	0.133333	NA	intron (NM_207517, intron 20 of 29)	intron (NM_207517, intron 20 of 29)	-100904	NR_036652	648809	Hs.585157	NR_036652		EFL1P1	EFTUD1P1|FAM42B|HsT19321	elongation factor like GTPase 1 pseudogene 1	pseudo
13.0666	chr18	8709295	8709407	+	0.133333	NA	Intergenic	AluJr4|SINE|Alu	-1730	NR_120598	100287082	Hs.439434	NR_120598	ENSG00000265962	GACAT2	MTCL1-AS1|MTCL1AS1	gastric cancer associated transcript 2	ncRNA
26.9666-4	chr7	4970466	4970872	+	0.133333	NA	Intergenic	L1ME1|LINE|L1	-3316	NR_015449	441191	Hs.520636	NR_015449	ENSG00000196204	RNF216P1	RNF216L|hCG2040556	ring finger protein 216 pseudogene 1	pseudo
36.5666-3	chr9	25655002	25655431	+	0.133333	NA	Intergenic	Intergenic	23642	NM_001004125	286319	Hs.26268	NM_001004125	ENSG00000198680	TUSC1	CCDC89B|TSG-9|TSG9	tumor suppressor candidate 1	protein-coding
19.2666-2	chr6	127216668	127216889	+	0.133333	NA	Intergenic	(CTT)n|Simple_repeat|Simple_repeat	-49904	NM_001242851	81847	Hs.267120	NM_030963	ENSG00000118518	RNF146	-	ring finger protein 146	protein-coding
17.5333-11	chr4	30716897	30717029	+	0.133333	NA	Intergenic	Intergenic	-3406	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
23.0999	chr2	9581128	9581370	+	0.133333	NA	Intergenic	Intergenic	-25419	NM_003183	6868	Hs.404914	NM_003183	ENSG00000151694	ADAM17	ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE	ADAM metallopeptidase domain 17	protein-coding
38.2999	chrX	86841107	86841760	+	0.133333	NA	Intergenic	Intergenic	578465	NM_001139515	117154	Hs.86603	NM_053281	ENSG00000126733	DACH2	-	dachshund family transcription factor 2	protein-coding
19.3333-11	chr3	194085802	194085978	+	0.133333	NA	Intergenic	Intergenic	-14920	NR_136179	285389	Hs.157102	NR_136179	ENSG00000230102	LINC02028	-	long intergenic non-protein coding RNA 2028	ncRNA
38.8667-2	chr3	31952224	31952916	+	0.133333	NA	intron (NM_001174060, intron 1 of 10)	intron (NM_001174060, intron 1 of 10)	-29180	NM_001137674	344787	Hs.585139	NM_001137674	ENSG00000197385	ZNF860	-	zinc finger protein 860	protein-coding
28.1333	chr1	211498614	211499195	+	0.133333	NA	Intergenic	Intergenic	-5987	NM_183059	343035	Hs.632495	NM_183059	ENSG00000198570	RD3	C1orf36|LCA12	retinal degeneration 3, GUCY2D regulator	protein-coding
27.3667-2	chr11	13080866	13081234	+	0.133333	NA	Intergenic	Intergenic	71734	NM_001080521	644943	Hs.134650	NM_001080521	ENSG00000189431	RASSF10	-	Ras association domain family member 10	protein-coding
21.8333-11	chr5	18154220	18154667	+	0.133333	NA	Intergenic	LTR8B|LTR|ERV1	347169	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
18.6667-4	chr12	29272009	29272276	+	0.133333	NA	intron (NM_001271783, intron 2 of 11)	L1PA10|LINE|L1	45706	NR_103860	100506606	Hs.298851	NR_103860	ENSG00000257176	LOC100506606	-	uncharacterized LOC100506606	ncRNA
17.2667-15	chr22	48015019	48015225	+	0.133333	NA	Intergenic	L1MC3|LINE|L1	-259242	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA
29.7-13	chr7	91845263	91845595	+	0.133333	NA	Intergenic	MLT1H|LTR|ERVL-MaLR	35273	NM_006980	7978	Hs.532216	NM_006980	ENSG00000127989	MTERF1	MTERF	mitochondrial transcription termination factor 1	protein-coding
20.0667-5	chr15	45109552	45109835	+	0.133333	NA	intron (NM_014080, intron 10 of 33)	intron (NM_014080, intron 10 of 33)	4468	NM_014080	50506	Hs.71377	NM_014080	ENSG00000140279	DUOX2	LNOX2|NOXEF2|P138-TOX|TDH6|THOX2	dual oxidase 2	protein-coding
31.2-4	chr10	73140792	73141079	+	0.133333	NA	intron (NM_007265, intron 9 of 13)	(TA)n|Simple_repeat|Simple_repeat	-14728	NR_145776	109617000		NR_145776	ENSG00000221164	SNORA11F	-	small nucleolar RNA, H/ACA box 11F	snoRNA
14.8-9	chr17	53896605	53896804	+	0.133333	NA	Intergenic	LTR33|LTR|ERVL	73777	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
25.4667-7	chr3	30351971	30352326	+	0.133333	NA	Intergenic	Intergenic	-166720	NR_147054	101928015	Hs.581534	NR_147054		LINC01985	-	long intergenic non-protein coding RNA 1985	ncRNA
30.4333-2	chr15	93742133	93742598	+	0.133333	NA	Intergenic	L1M4b|LINE|L1	-114195	NR_120321	101927153	Hs.371900	NR_120321		LINC02207	-	long intergenic non-protein coding RNA 2207	ncRNA
21.6-18	chr8	106132734	106132951	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-72339	NR_125797	102723356	Hs.571413	NR_125796		ZFPM2-AS1	SCAT3	ZFPM2 antisense RNA 1	ncRNA
40.7666-2	chr5	31723946	31724572	+	0.133333	NA	intron (NM_178140, intron 1 of 24)	intron (NM_178140, intron 1 of 24)	85128	NM_178140	23037	Hs.481819	NM_015022	ENSG00000133401	PDZD2	AIPC|PAPIN|PDZK3|PIN1	PDZ domain containing 2	protein-coding
39.1666-2	chr16	8417594	8418096	+	0.133333	NA	Intergenic	Intergenic	171993	NR_110736	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding
14.9667-3	chr17	55440364	55440603	+	0.133333	NA	Intergenic	Intergenic	-18648	NM_012329	23531	Hs.463483	NM_012329	ENSG00000108960	MMD	MMA|MMD1|PAQR11	monocyte to macrophage differentiation associated	protein-coding
36.1666	chr2	228641357	228641937	+	0.133333	NA	Intergenic	Intergenic	-30252	NR_151716	101928765	Hs.334040	NR_151716	ENSG00000232023	LINC01807	-	long intergenic non-protein coding RNA 1807	ncRNA
12.3667-5	chr3	124708568	124708675	+	0.133333	NA	intron (NM_007064, intron 24 of 26)	L1MEf|LINE|L1	-21745	NR_033437	7372	Hs.2057	NM_000373	ENSG00000114491	UMPS	OPRT	uridine monophosphate synthetase	protein-coding
24.6-10	chr5	138380032	138380355	+	0.133333	NA	intron (NM_016604, intron 5 of 23)	AluJb|SINE|Alu	27508	NM_016604	51780	Hs.483486	NM_016604	ENSG00000120733	KDM3B	5qNCA|C5orf7|JMJD1B|NET22	lysine demethylase 3B	protein-coding
42.9333-4	chr8	128501797	128502327	+	0.133333	NA	intron (NR_121672, intron 2 of 7)	intron (NR_121672, intron 2 of 7)	62617	NR_121673	101927774	Hs.628730	NR_121672		LINC00824	LINC01263	long intergenic non-protein coding RNA 824	ncRNA
38.1-2	chr17	69937522	69937860	+	0.133333	NA	Intergenic	AluJo|SINE|Alu	-24016	NR_110874	102723487	Hs.451409	NR_110874	ENSG00000237560	LINC01497	-	long intergenic non-protein coding RNA 1497	ncRNA
50.5999	chr8	112504277	112504695	+	0.133333	NA	intron (NM_001363185, intron 27 of 66)	intron (NM_001363185, intron 27 of 66)	-139007	NR_031745	100302225		NR_031745	ENSG00000238399	MIR2053	hsa-mir-2053	microRNA 2053	ncRNA
33.0333-5	chr2	39021954	39022263	+	0.133333	NA	intron (NM_005633, intron 10 of 22)	intron (NM_005633, intron 10 of 22)	-61764	NR_028386	375196	Hs.659035	NR_028386	ENSG00000269210	LOC375196	-	uncharacterized LOC375196	ncRNA
43.2667	chr10	121706932	121707509	+	0.133333	NA	Intergenic	Intergenic	-108762	NM_022970	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding
18.6666	chr12	13413342	13413540	+	0.133333	NA	Intergenic	L1MA4|LINE|L1	-36696	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA
16.6333-10	chr6	91396661	91396843	+	0.133333	NA	Intergenic	Intergenic	-124908	NR_039786	100616174		NR_039786	ENSG00000263734	MIR4643	-	microRNA 4643	ncRNA
20.3333-13	chr2	14669346	14669498	+	0.133333	NA	Intergenic	Intergenic	36705	NR_144632	151354	Hs.260855	NM_145175	ENSG00000162981	LRATD1	FAM84A|NSE1|PP11517	LRAT domain containing 1	protein-coding
15.6-4	chr17	47647830	47647988	+	0.133333	NA	Intergenic	Intergenic	-2010	NM_002265	3837	Hs.532793	NM_002265	ENSG00000108424	KPNB1	IMB1|IPO1|IPOB|Impnb|NTF97	karyopherin subunit beta 1	protein-coding
13.1667-7	chr20	52342556	52342768	+	0.133333	NA	Intergenic	LTR16A1|LTR|ERVL	-150677	NM_199427	55734	Hs.473082	NM_018197	ENSG00000020256	ZFP64	ZNF338	ZFP64 zinc finger protein	protein-coding
20.5667-9	chr5	7945814	7946099	+	0.133333	NA	Intergenic	Intergenic	76808	NR_157171	4552	Hs.481551	NM_002454	ENSG00000124275	MTRR	MSR|cblE	5-methyltetrahydrofolate-homocysteine methyltransferase reductase	protein-coding
43.8666-6	chr6	68468331	68469163	+	0.133333	NA	Intergenic	Tigger2b_Pri|DNA|TcMar-Tigger	-138848	NR_125854	101928280	Hs.544560	NR_125854	ENSG00000226497	LINC02549	-	long intergenic non-protein coding RNA 2549	ncRNA
23.8333-5	chr4	72463625	72463880	+	0.133333	NA	intron (NM_014243, intron 3 of 21)	intron (NM_014243, intron 3 of 21)	105469	NM_014243	9508	Hs.590919	NM_014243	ENSG00000156140	ADAMTS3	ADAMTS-4|HKLLS3	ADAM metallopeptidase with thrombospondin type 1 motif 3	protein-coding
27.6-11	chr5	96744435	96744884	+	0.133333	NA	intron (NR_104285, intron 1 of 17)	intron (NR_104285, intron 1 of 17)	1057	NR_104285	831	Hs.436186	NM_001750	ENSG00000153113	CAST	BS-17|PLACK	calpastatin	protein-coding
26.7333-8	chr4	152260646	152261023	+	0.133333	NA	Intergenic	L1MA10|LINE|L1	-76821	NR_104273	102191832	Hs.712524	NR_104273	ENSG00000270751	FBXW7-AS1	DEAR|DEspR	FBXW7 antisense RNA 1	ncRNA
24.2-10	chr9	91164872	91165285	+	0.133333	NA	intron (NR_135306, intron 2 of 2)	intron (NR_135306, intron 2 of 2)	46016	NR_135306	100129347	Hs.522287	NR_135306	ENSG00000229694	LINC00484	C9orf73	long intergenic non-protein coding RNA 484	ncRNA
22.3333-11	chr2	225057452	225057754	+	0.133333	NA	Intergenic	L1MC1|LINE|L1	-15135	NM_014689	55619	Hs.46578	NM_014689	ENSG00000135905	DOCK10	DRIP2|Nbla10300|ZIZ3	dedicator of cytokinesis 10	protein-coding
21.8333-17	chrX	45274365	45274563	+	0.133333	NA	Intergenic	MER31B|LTR|ERV1	-73588	NM_024689	79742	Hs.98321	NM_024689	ENSG00000147113	DIPK2B	4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1	divergent protein kinase domain 2B	protein-coding
45.8332	chr2	193961511	193961881	+	0.133333	NA	Intergenic	Intergenic	-382573	NR_110222	101927406	Hs.385793	NR_110222	ENSG00000225539	LINC01821	-	long intergenic non-protein coding RNA 1821	ncRNA
21.4-10	chr5	24845528	24845981	+	0.133333	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	-5171	NR_037896	340107	Hs.145181	NR_037896	ENSG00000248908	LINC02239	-	long intergenic non-protein coding RNA 2239	ncRNA
21.1-6	chr3	106803915	106804084	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	436639	NR_028303	100302640	Hs.648607	NR_028303	ENSG00000242759	LINC00882	-	long intergenic non-protein coding RNA 882	ncRNA
27.8-5	chr13	29238852	29239146	+	0.133333	NA	intron (NM_001033602, intron 3 of 13)	L1MA9|LINE|L1	-189661	NM_015233	23281	Hs.22287	NM_015233	ENSG00000132938	MTUS2	CAZIP|ICIS|KIAA0774|TIP150	microtubule associated scaffold protein 2	protein-coding
14.8-12	chr5	1797975	1798172	+	0.133333	NA	TTS (NM_032479)	TTS (NM_032479)	1764	NM_032479	64979	Hs.719465	NM_032479	ENSG00000171421	MRPL36	BRIP1|L36mt|MRP-L36|PRPL36|RPMJ	mitochondrial ribosomal protein L36	protein-coding
25.6666	chr1	225915533	225915797	+	0.133333	NA	Intergenic	MER70C|LTR|ERVL	6477	NR_106799	102466270		NR_106799	ENSG00000284519	MIR6741	hsa-mir-6741	microRNA 6741	ncRNA
28.0333-3	chr14	31336548	31336804	+	0.133333	NA	intron (NM_015473, intron 22 of 35)	intron (NM_015473, intron 22 of 35)	83874	NM_015473	25938	Hs.744979	NM_015473	ENSG00000129493	HEATR5A	C14orf125	HEAT repeat containing 5A	protein-coding
43.4667	chr1	240496219	240496815	+	0.133333	NA	intron (NM_022469, intron 1 of 1)	L2a|LINE|L2	115638	NM_022469	64388	Hs.98206	NM_022469	ENSG00000180875	GREM2	CKTSF1B2|DAND3|PRDC|STHAG9	gremlin 2, DAN family BMP antagonist	protein-coding
21.0333-19	chr9	32462173	32462462	+	0.133333	NA	intron (NM_014314, intron 16 of 17)	intron (NM_014314, intron 16 of 17)	63879	NM_014314	23586	Hs.190622	NM_014314	ENSG00000107201	DDX58	RIG-I|RIG1|RIGI|RLR-1|SGMRT2	DExD/H-box helicase 58	protein-coding
33.8666-6	chr8	136089629	136090004	+	0.133333	NA	Intergenic	Intergenic	-440982	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
17.1333-16	chr3	71622020	71622248	+	0.133333	NA	Intergenic	L2c|LINE|L2	-38145	NM_001244810	27086	Hs.59368	NM_032682	ENSG00000114861	FOXP1	12CC4|HSPC215|MFH|QRF1|hFKH1B	forkhead box P1	protein-coding
32.0666-2	chr22	50190573	50191036	+	0.133333	NA	intron (NM_001320487, intron 1 of 9)	CpG	217	NM_001320487	80305	Hs.517731	NM_025204	ENSG00000170638	TRABD	LP6054|PP2447	TraB domain containing	protein-coding
41.2	chr14	56608603	56609096	+	0.133333	NA	intron (NM_017799, intron 5 of 15)	intron (NM_017799, intron 5 of 15)	29051	NM_017799	54916	Hs.497253	NM_017799	ENSG00000070269	TMEM260	C14orf101|SHDRA	transmembrane protein 260	protein-coding
34.2999-2	chr6	35914484	35914867	+	0.133333	NA	intron (NR_034069, intron 2 of 15)	L2a|LINE|L2	6423	NM_003137	6732	Hs.443861	NM_003137	ENSG00000096063	SRPK1	SFRSK1	SRSF protein kinase 1	protein-coding
37.0666-4	chr7	1554717	1555108	+	0.133333	NA	intron (NM_001097620, intron 2 of 8)	MIRb|SINE|MIR	1293	NM_001097620	202915	Hs.592174	NM_152689	ENSG00000164855	TMEM184A	SDMG1	transmembrane protein 184A	protein-coding
23.5333-14	chr5	113390995	113391172	+	0.133333	NA	intron (NM_001085377, intron 1 of 18)	intron (NM_001085377, intron 1 of 18)	43906	NM_032028	83942	Hs.519507	NM_032028	ENSG00000212122	TSSK1B	FKSG81|SPOGA4|STK22D|TSK1|TSSK1	testis specific serine kinase 1B	protein-coding
58.9666-3	chr13	67635394	67636114	+	0.133333	NA	Intergenic	Intergenic	263367	NR_130792	100874145	Hs.508194	NR_130792	ENSG00000230040	LINC00364	LncRNA00364	long intergenic non-protein coding RNA 364	ncRNA
26.4999	chr1	101912217	101912549	+	0.133333	NA	intron (NM_058170, intron 1 of 5)	LTR16E2|LTR|ERVL	40371	NR_033424	94236	Hs.606193	NR_033424		DNAJA1P5	HEJ1	DnaJ heat shock protein family (Hsp40) member A1 pseudogene 5	pseudo
26.2-28	chr9	132172210	132172518	+	0.133333	NA	intron (NM_032536, intron 2 of 7)	intron (NM_032536, intron 2 of 7)	10306	NM_032536	84628	Hs.163642	NM_032536	ENSG00000196358	NTNG2	LHLL9381|Lmnt2|NTNG1|bA479K20.1	netrin G2	protein-coding
25.9666-5	chr9	95648806	95649314	+	0.133333	NA	Intergenic	L1MC4a|LINE|L1	-132003	NM_001354919	5727	Hs.494538	NM_000264	ENSG00000185920	PTCH1	BCNS|NBCCS|PTC|PTC1|PTCH	patched 1	protein-coding
49.8999	chr5	151296671	151297146	+	0.133333	NA	intron (NM_181774, intron 2 of 9)	L3|LINE|CR1	6858	NM_181774	285641	Hs.720893	NM_181774	ENSG00000186334	SLC36A3	PAT3|TRAMD2|tramdorin2	solute carrier family 36 member 3	protein-coding
38.0666-3	chr18	12833309	12833788	+	0.133333	NA	intron (NM_080423, intron 3 of 8)	intron (NM_080423, intron 3 of 8)	7414	NM_001308287	5771	Hs.654527	NM_002828	ENSG00000175354	PTPN2	PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP	protein tyrosine phosphatase non-receptor type 2	protein-coding
49.2666-4	chr8	8595252	8595741	+	0.133333	NA	Intergenic	AluY|SINE|Alu	-106441	NM_194284	137075	Hs.183617	NM_194284	ENSG00000253958	CLDN23	CLDNL|hCG1646163	claudin 23	protein-coding
22.6-10	chr18	14057885	14058279	+	0.133333	NA	Intergenic	L1PA16|LINE|L1	74353	NM_145287	162655	Hs.352635	NM_145287	ENSG00000175322	ZNF519	HsT2362	zinc finger protein 519	protein-coding
38.3333	chr10	110514931	110515425	+	0.133333	NA	Intergenic	L2b|LINE|L2	17271	NM_004419	1847	Hs.2128	NM_004419	ENSG00000138166	DUSP5	DUSP|HVH3	dual specificity phosphatase 5	protein-coding
15.1333-9	chr4	44145877	44146073	+	0.133333	NA	Intergenic	Intergenic	128913	NR_131958	100506827	Hs.156197	NR_131958	ENSG00000251350	LINC02475	LVCAT1	long intergenic non-protein coding RNA 2475	ncRNA
29.9666	chr1	104355414	104355913	+	0.133333	NA	Intergenic	Intergenic	282640	NR_033990	100129138	Hs.514487	NR_033990	ENSG00000215869	LOC100129138	-	THAP domain containing 3 pseudogene	pseudo
36.7333-3	chr16	73360889	73361310	+	0.133333	NA	Intergenic	Intergenic	-25706	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA
32.3333-8	chr3	103577467	103577839	+	0.133333	NA	Intergenic	Intergenic	-53537	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
54.1665	chr9	96205990	96206464	+	0.133333	NA	Intergenic	Intergenic	-40236	NR_146524	105376162	Hs.662614	NR_146524	ENSG00000232283	HSD17B3-AS1	-	HSD17B3 antisense RNA 1	ncRNA
32.3333-3	chr14	80673303	80673642	+	0.133333	NA	intron (NM_152446, intron 19 of 24)	AluYa5|SINE|Alu	268266	NM_152446	145508	Hs.162889	NM_152446	ENSG00000100629	CEP128	C14orf145|C14orf61|LEDP/132	centrosomal protein 128	protein-coding
25.5666-7	chr7	92827915	92828153	+	0.133333	NA	intron (NM_001259, intron 2 of 7)	intron (NM_001259, intron 2 of 7)	5925	NM_001259	1021	Hs.119882	NM_001259	ENSG00000105810	CDK6	MCPH12|PLSTIRE	cyclin dependent kinase 6	protein-coding
10.7333-8	chr5	17964111	17964196	+	0.133333	NA	Intergenic	MIR|SINE|MIR	156879	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
15.2	chr18	2840756	2840969	+	0.133333	NA	Intergenic	Intergenic	-6144	NM_032048	84034	Hs.532815	NM_032048	ENSG00000132205	EMILIN2	EMILIN-2|FOAP-10	elastin microfibril interfacer 2	protein-coding
24.9999	chr4	119765389	119765605	+	0.133333	NA	Intergenic	MLT1B-int|LTR|ERVL-MaLR	39018	NR_110660	101927007	Hs.143958	NR_110660	ENSG00000250772	LINC01365	-	long intergenic non-protein coding RNA 1365	ncRNA
20.7333-11	chr2	39212051	39212271	+	0.133333	NA	intron (NM_001009565, intron 3 of 7)	MER5A|DNA|hAT-Charlie	17427	NM_001346911	344387	Hs.403201	NM_001009565	ENSG00000205111	CDKL4	-	cyclin dependent kinase like 4	protein-coding
13.2-10	chr2	163979633	163979737	+	0.133333	NA	Intergenic	Intergenic	-243677	NM_018086	55137	Hs.593650	NM_018086	ENSG00000182263	FIGN	-	fidgetin, microtubule severing factor	protein-coding
26-8	chr6	34828258	34828681	+	0.133333	NA	intron (NM_017754, intron 4 of 20)	L1MC5|LINE|L1	36386	NM_017754	54887	Hs.700656	NM_017754	ENSG00000065060	UHRF1BP1	C6orf107|ICBP90|dJ349A12.1	UHRF1 binding protein 1	protein-coding
18.4-11	chr6	13547270	13547499	+	0.133333	NA	Intergenic	Intergenic	-27145	NM_001242827	23408	Hs.567431	NM_012241	ENSG00000124523	SIRT5	SIR2L5	sirtuin 5	protein-coding
30.2666-3	chr4	7594354	7594796	+	0.133333	NA	intron (NM_020777, intron 3 of 26)	intron (NM_020777, intron 3 of 26)	134547	NR_036238	100422826		NR_036238	ENSG00000266690	MIR4274	-	microRNA 4274	ncRNA
26.2-14	chr20	54648642	54648957	+	0.133333	NA	intron (NM_018431, intron 7 of 7)	L2a|LINE|L2	173206	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
19.7666	chr1	21759965	21760142	+	0.133333	NA	intron (NM_001350167, intron 1 of 26)	L1MC4|LINE|L1	23096	NM_001350168	84196	Hs.467524	NM_032236	ENSG00000090686	USP48	RAP1GA1|USP31	ubiquitin specific peptidase 48	protein-coding
28.7666-3	chr14	59529379	59529890	+	0.133333	NA	intron (NM_001164399, intron 14 of 19)	intron (NM_001164399, intron 14 of 19)	45117	NM_016475	51528	Hs.446850	NM_016475	ENSG00000050130	JKAMP	C14orf100|C24orf100|CDA06|HSPC213|HSPC327|JAMP	JNK1/MAPK8 associated membrane protein	protein-coding
20.6666-7	chr4	112867713	112867909	+	0.133333	NA	intron (NM_001354271, intron 1 of 42)	L1MB7|LINE|L1	6824	NM_001354264	287	Hs.620557	NM_001148	ENSG00000145362	ANK2	ANK-2|LQT4|brank-2	ankyrin 2	protein-coding
24.6666-2	chr6	117640911	117641133	+	0.133333	NA	Intergenic	Intergenic	34262	NR_110854	101927919	Hs.467500	NR_110854		LOC101927919	-	uncharacterized LOC101927919	ncRNA
21.3666-4	chr8	125866711	125867033	+	0.133333	NA	Intergenic	L1M3|LINE|L1	84325	NR_038447	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA
17.6666-4	chr8	96846007	96846243	+	0.133333	NA	intron (NM_016134, intron 3 of 7)	L1M5|LINE|L1	200883	NM_016134	10404	Hs.156178	NM_016134	ENSG00000104324	CPQ	LDP|PGCP	carboxypeptidase Q	protein-coding
29.2666-5	chr6	35348207	35348533	+	0.133333	NA	intron (NM_001171819, intron 2 of 6)	intron (NM_001171819, intron 2 of 6)	5812	NM_001171819	5467	Hs.696032	NM_006238	ENSG00000112033	PPARD	FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB	peroxisome proliferator activated receptor delta	protein-coding
66.4999-2	chr5	18496944	18497793	+	0.133333	NA	Intergenic	L1MDa|LINE|L1	690094	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
17.1333-14	chr2	106182961	106183203	+	0.133333	NA	intron (NM_025076, intron 1 of 14)	intron (NM_025076, intron 1 of 14)	11257	NM_025076	80146	Hs.469561	NM_025076	ENSG00000115652	UXS1	SDR6E1|UGD	UDP-glucuronate decarboxylase 1	protein-coding
23.8-9	chr3	173759360	173759576	+	0.133333	NA	intron (NM_001365928, intron 3 of 6)	intron (NM_001365928, intron 3 of 6)	161328	NR_046664	100874010	Hs.624265	NR_046664	ENSG00000228213	NLGN1-AS1	-	NLGN1 antisense RNA 1	ncRNA
17.0667-5	chr16	47300800	47301007	+	0.133333	NA	intron (NM_030790, intron 10 of 17)	intron (NM_030790, intron 10 of 17)	156835	NR_110904	101927102	Hs.634652	NR_110903		ITFG1-AS1	-	ITFG1 antisense RNA 1	ncRNA
23.5333-3	chr1	217685211	217685454	+	0.133333	NA	intron (NM_138796, intron 5 of 10)	intron (NM_138796, intron 5 of 10)	53988	NM_138796	128153	Hs.171130	NM_138796	ENSG00000162814	SPATA17	IQCH|MSRG-11|MSRG11	spermatogenesis associated 17	protein-coding
24-5	chr2	71623395	71623665	+	0.133333	NA	intron (NM_001130987, intron 41 of 55)	Tigger13a|DNA|TcMar-Tigger	156831	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|LGMDR2|MMD1	dysferlin	protein-coding
42.9332	chr5	19088872	19089201	+	0.133333	NA	Intergenic	Intergenic	797236	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
43.4666-2	chr5	111842037	111842546	+	0.133333	NA	intron (NM_001142474, intron 2 of 3)	intron (NM_001142474, intron 2 of 3)	-70217	NR_046678	100873948	Hs.147716	NR_046678	ENSG00000250095	NREP-AS1	-	NREP antisense RNA 1	ncRNA
34.5999	chr17	78057196	78057544	+	0.133333	NA	intron (NM_018996, intron 4 of 20)	intron (NM_018996, intron 4 of 20)	53133	NM_001142640	57690	Hs.406810	NM_018996	ENSG00000078687	TNRC6C	-	trinucleotide repeat containing adaptor 6C	protein-coding
19.7333	chr11	91284241	91284524	+	0.133333	NA	Intergenic	(AGAT)n|Simple_repeat|Simple_repeat	-415180	NR_031663	100302228		NR_031663	ENSG00000221586	MIR1261	MIRN1261|hsa-mir-1261	microRNA 1261	ncRNA
14.9667-13	chr8	74328332	74328626	+	0.133333	NA	Intergenic	LTR16B1|LTR|ERVL	-6939	NM_020647	56704	Hs.657367	NM_020647	ENSG00000104369	JPH1	CMT2K|JP-1|JP1	junctophilin 1	protein-coding
35.4667-12	chr6	61510108	61510618	+	0.133333	NA	Intergenic	ALR/Alpha|Satellite|centr	-63767	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
32.8666-5	chr4	165360265	165360659	+	0.133333	NA	Intergenic	Intergenic	-18546	NM_001873	1363	Hs.75360	NM_001873	ENSG00000109472	CPE	CPH	carboxypeptidase E	protein-coding
36.8999	chr12	49456545	49456891	+	0.133333	NA	intron (NM_001293285, intron 3 of 14)	L2a|LINE|L2	67544	NR_033267	100335030	Hs.687044	NR_033267		LOC100335030	-	FGFR1 oncogene partner 2 pseudogene	pseudo
31.9333-4	chr15	72486387	72486898	+	0.133333	NA	intron (NM_005744, intron 1 of 13)	intron (NM_005744, intron 1 of 13)	12312	NM_005744	25820	Hs.268787	NM_005744	ENSG00000166233	ARIH1	ARI|HARI|HHARI|UBCH7BP	ariadne RBR E3 ubiquitin protein ligase 1	protein-coding
29.6-5	chr12	124837156	124837535	+	0.133333	NA	intron (NR_160424, intron 1 of 11)	Cheshire|DNA|hAT-Charlie	2326	NM_001367982	949	Hs.731377	NM_005505	ENSG00000073060	SCARB1	CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1	scavenger receptor class B member 1	protein-coding
14.1333-14	chrX	74367548	74367654	+	0.133333	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-53892	NM_006517	6567	Hs.75317	NM_006517	ENSG00000147100	SLC16A2	AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT	solute carrier family 16 member 2	protein-coding
25.3-15	chr6	84138598	84139158	+	0.133333	NA	intron (NM_001286206, intron 25 of 26)	intron (NM_001286206, intron 25 of 26)	88765	NM_014895	22832	Hs.485865	NM_014895	ENSG00000135315	CEP162	C6orf84|KIAA1009|QN1	centrosomal protein 162	protein-coding
16.1333-5	chr15	73674212	73674433	+	0.133333	NA	Intergenic	L1MC1|LINE|L1	-9959	NM_025240	80381	Hs.744915	NM_025240	ENSG00000103855	CD276	4Ig-B7-H3|B7-H3|B7H3|B7RP-2	CD276 molecule	protein-coding
8.03333-5	chr6	14156220	14156318	+	0.133333	NA	Intergenic	L1ME4b|LINE|L1	38497	NM_001040280	9308	Hs.595133	NM_004233	ENSG00000112149	CD83	BL11|HB15	CD83 molecule	protein-coding
24.4666-6	chr8	23621953	23622419	+	0.133333	NA	Intergenic	Intergenic	60703	NM_001256339	4824	Hs.55999	NM_006167	ENSG00000167034	NKX3-1	BAPX2|NKX3|NKX3.1|NKX3A	NK3 homeobox 1	protein-coding
38.5333	chr4	38524132	38524589	+	0.133333	NA	Intergenic	Intergenic	-1180	NR_110951	101928776	Hs.586147	NR_110951	ENSG00000249534	LINC01258	-	long intergenic non-protein coding RNA 1258	ncRNA
25.5333-7	chr20	47152799	47153127	+	0.133333	NA	intron (NM_172110, intron 10 of 13)	MER20B|DNA|hAT-Charlie	-14004	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA
27.9666-5	chr3	116665887	116666320	+	0.133333	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	-43685	NR_015391	285194	Hs.120364	NR_015391		TUSC7	LINC00902|LSAMP-AS1|LSAMP-AS3|LSAMPAS3|NCRNA00295	tumor suppressor candidate 7	ncRNA
34.2666	chr12	23920114	23920421	+	0.133333	NA	intron (NM_152989, intron 4 of 17)	intron (NM_152989, intron 4 of 17)	29403	NM_001330785	6660	Hs.434948	NM_006940	ENSG00000134532	SOX5	L-SOX5|L-SOX5B|L-SOX5F|LAMSHF	SRY-box transcription factor 5	protein-coding
23.6-3	chr11	96527913	96528225	+	0.133333	NA	Intergenic	L1PA13|LINE|L1	19644	NR_135097	105369443	Hs.599377	NR_135097	ENSG00000256684	LINC02737	-	long intergenic non-protein coding RNA 2737	ncRNA
34.2333-2	chr5	37344648	37345107	+	0.133333	NA	intron (NM_001278312, intron 9 of 33)	AluSg|SINE|Alu	26229	NM_001278312	9631	Hs.547696	NM_004298	ENSG00000113569	NUP155	ATFB15|N155	nucleoporin 155	protein-coding
17.6-14	chrX	68807126	68807319	+	0.133333	NA	Intergenic	HAL1ME|LINE|L1	-21775	NM_004429	1947	Hs.144700	NM_004429	ENSG00000090776	EFNB1	CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2	ephrin B1	protein-coding
25.8-19	chr4	122871510	122871890	+	0.133333	NA	intron (NM_001361665, intron 1 of 2)	L1PA10|LINE|L1	44869	NM_001361665	2247	Hs.284244	NM_002006	ENSG00000138685	FGF2	BFGF|FGF-2|FGFB|HBGF-2	fibroblast growth factor 2	protein-coding
21.2333-5	chr12	65732684	65732998	+	0.133333	NA	Intergenic	L1MB3|LINE|L1	-90469	NR_120432	100507065	Hs.591038	NR_120431		LOC100507065	-	uncharacterized LOC100507065	ncRNA
35.4667	chr1	239795441	239795969	+	0.133333	NA	intron (NM_000740, intron 3 of 4)	intron (NM_000740, intron 3 of 4)	-76586	NR_103776	100506915	Hs.667175	NR_103776	ENSG00000233355	CHRM3-AS2	-	CHRM3 antisense RNA 2	ncRNA
42.0666-3	chr7	140849372	140849825	+	0.133333	NA	intron (NR_148928, intron 2 of 17)	AluSx3|SINE|Alu	75331	NM_001354609	673	Hs.324250	NM_004333	ENSG00000157764	BRAF	B-RAF1|B-raf|BRAF1|NS7|RAFB1	B-Raf proto-oncogene, serine/threonine kinase	protein-coding
25.3333-10	chr3	18062723	18063083	+	0.133333	NA	intron (NR_161333, intron 4 of 4)	intron (NR_161333, intron 4 of 4)	100351	NR_161333	339862	Hs.652981	NR_046199		LOC339862	-	uncharacterized LOC339862	ncRNA
40.6666-5	chr5	71697212	71697679	+	0.133333	NA	Intergenic	Intergenic	-21830	NM_004291	9607	Hs.1707	NM_004291	ENSG00000164326	CARTPT	CART	CART prepropeptide	protein-coding
48.6999	chr4	48930043	48930703	+	0.133333	NA	Intergenic	L2a|LINE|L2	-23545	NR_104589	132299	Hs.95835	NM_152398	ENSG00000145247	OCIAD2	-	OCIA domain containing 2	protein-coding
17.8667-7	chr15	72745250	72745439	+	0.133333	NA	Intergenic	AluSq2|SINE|Alu	-37491	NR_040107	100287559	Hs.562587	NR_040107	ENSG00000260898	ADPGK-AS1	-	ADPGK antisense RNA 1	ncRNA
50.3	chr11	40234800	40235567	+	0.133333	NA	intron (NM_020929, intron 3 of 4)	intron (NM_020929, intron 3 of 4)	57947	NR_047674	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
41.9666-2	chr20	31060565	31060997	+	0.133333	NA	Intergenic	(GGAAT)n|Simple_repeat|Simple_repeat	-196883	NM_001037730	245929	Hs.580793	NM_001037730	ENSG00000215547	DEFB115	DEFB-15	defensin beta 115	protein-coding
47.0333	chr1	211439695	211440100	+	0.133333	NA	Intergenic	MER5A1|DNA|hAT-Charlie	53020	NM_001164688	343035	Hs.632495	NM_183059	ENSG00000198570	RD3	C1orf36|LCA12	retinal degeneration 3, GUCY2D regulator	protein-coding
36.0333-3	chr20	56901238	56901650	+	0.133333	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	272138	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding
12.2666-2	chr5	21436415	21436566	+	0.133333	NA	Intergenic	Intergenic	-22990	NR_027027	728411	Hs.88181	NM_207331	ENSG00000183666	GUSBP1	-	GUSB pseudogene 1	pseudo
29.6666-9	chr9	71184763	71185067	+	0.133333	NA	intron (NM_001366143, intron 1 of 25)	intron (NM_001366143, intron 1 of 25)	-63294	NM_001366151	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding
18.4667-11	chrX	125604504	125604674	+	0.133333	NA	Intergenic	Intergenic	284718	NM_001195272	100129520		NM_001195272	ENSG00000282815	TEX13C	-	TEX13 family member C	protein-coding
49.7333-5	chr5	155238279	155238964	+	0.133333	NA	Intergenic	MLT1M|LTR|ERVL-MaLR	224866	NM_001099293	285643	Hs.567824	NM_001099293	ENSG00000226650	KIF4B	-	kinesin family member 4B	protein-coding
36.2-9	chr9	23292830	23293352	+	0.133333	NA	Intergenic	Intergenic	379308	NR_121602	101929563	Hs.533220	NR_121602	ENSG00000283982	LOC101929563	-	uncharacterized LOC101929563	ncRNA
39.4-5	chr18	32524747	32525204	+	0.133333	NA	Intergenic	L1MD2|LINE|L1	13312	NR_003558	441818	Hs.549773	NR_003558	ENSG00000260389	WBP11P1	HsT3017	WW domain binding protein 11 pseudogene 1	pseudo
25.9667-9	chr5	74439191	74439435	+	0.133333	NA	intron (NR_126354, intron 2 of 2)	L2c|LINE|L2	97663	NR_126354	104310351	Hs.582291	NR_126354	ENSG00000248673	LINC01331	-	long intergenic non-protein coding RNA 1331	ncRNA
63.8333	chrX	67791860	67792614	+	0.133333	NA	Intergenic	Intergenic	247614	NM_001348061	367	Hs.76704	NM_000044	ENSG00000169083	AR	AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM	androgen receptor	protein-coding
41.8-3	chr5	84679967	84680500	+	0.133333	NA	Intergenic	Intergenic	-295353	NM_005711	10085	Hs.482730	NM_005711	ENSG00000164176	EDIL3	DEL1	EGF like repeats and discoidin domains 3	protein-coding
33.5333-4	chr5	106662493	106663033	+	0.133333	NA	Intergenic	Intergenic	348251	NR_104671	102467213	Hs.570923	NR_104671	ENSG00000251027	LINC01950	-	long intergenic non-protein coding RNA 1950	ncRNA
8.99998	chr10	105528537	105528604	+	0.133333	NA	Intergenic	Intergenic	291763	NR_120625	101927549	Hs.556885	NR_120625		LINC02627	-	long intergenic non-protein coding RNA 2627	ncRNA
12.9333-4	chr14	24780756	24780895	+	0.133333	NA	Intergenic	Intergenic	-146635	NR_144343	3002	Hs.1051	NM_004131	ENSG00000100453	GZMB	C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT	granzyme B	protein-coding
14.1-5	chr4	29753725	29753830	+	0.133333	NA	Intergenic	L1MCa|LINE|L1	539485	NR_146996	105374561	Hs.582013	NR_146996	ENSG00000248338	LINC02472	-	long intergenic non-protein coding RNA 2472	ncRNA
67.9998	chr1	76496000	76496558	+	0.133333	NA	intron (NM_001349109, intron 3 of 3)	intron (NM_001349109, intron 3 of 3)	282988	NR_149059	110806286		NR_149059	ENSG00000237552	LINC02567	-	long intergenic non-protein coding RNA 2567	ncRNA
39.7333	chr1	74803556	74804093	+	0.133333	NA	Intergenic	Intergenic	-70416	NM_001130043	1429	Hs.83114	NM_001889	ENSG00000116791	CRYZ	-	crystallin zeta	protein-coding
17.3	chr1	182918808	182919109	+	0.133333	NA	intron (NM_030933, intron 6 of 9)	L1MB5|LINE|L1	34208	NM_001345928	81626	Hs.497034	NM_030933	ENSG00000157060	SHCBP1L	C1orf14|GE36	SHC binding and spindle associated 1 like	protein-coding
18.7667-12	chr6	47664752	47665006	+	0.133333	NA	intron (NM_153839, intron 2 of 10)	(ATAAT)n|Simple_repeat|Simple_repeat	8407	NM_153839	222611	Hs.724860	NM_153839	ENSG00000164393	ADGRF2	GPR111|PGR20|hGPCR35	adhesion G protein-coupled receptor F2	protein-coding
21.1333-17	chr9	113589176	113589466	+	0.133333	NA	intron (NM_001282922, intron 3 of 7)	intron (NM_001282922, intron 3 of 7)	-4599	NM_144489	5998	Hs.494875	NM_017790	ENSG00000138835	RGS3	C2PA|RGP3	regulator of G protein signaling 3	protein-coding
50.7999-3	chr7	134627324	134627808	+	0.133333	NA	Intergenic	L1MB5|LINE|L1	-19213	NM_001293085	669	Hs.198365	NM_001724	ENSG00000172331	BPGM	DPGM|ECYT8	bisphosphoglycerate mutase	protein-coding
24.5	chr10	116329425	116329690	+	0.133333	NA	intron (NM_198515, intron 3 of 8)	intron (NM_198515, intron 3 of 8)	5109	NM_198515	374355	Hs.233407	NM_198515	ENSG00000182645	CCDC172	C10orf96	coiled-coil domain containing 172	protein-coding
20-8	chr5	131507638	131507907	+	0.133333	NA	intron (NM_016340, intron 9 of 27)	intron (NM_016340, intron 9 of 27)	127457	NM_001164388	51735	Hs.483329	NM_016340	ENSG00000158987	RAPGEF6	KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2	Rap guanine nucleotide exchange factor 6	protein-coding
32.2667-4	chr20	51151887	51152391	+	0.133333	NA	Intergenic	AluSc|SINE|Alu	-129032	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding
52-4	chr22	38760554	38761218	+	0.133333	NA	Intergenic	Intergenic	-4888	NM_001199579	25777	Hs.517622	NM_015374	ENSG00000100242	SUN2	UNC84B	Sad1 and UNC84 domain containing 2	protein-coding
24.4667-3	chr12	122421173	122421482	+	0.133333	NA	intron (NM_198240, intron 1 of 23)	intron (NM_198240, intron 1 of 23)	1242	NM_001247997	6249	Hs.524809	NM_002956	ENSG00000130779	CLIP1	CLIP|CLIP-170|CLIP170|CYLN1|RSN	CAP-Gly domain containing linker protein 1	protein-coding
23.5999	chr2	147110643	147110951	+	0.133333	NA	Intergenic	Intergenic	523740	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
18.0666-3	chr8	87782525	87782660	+	0.133333	NA	Intergenic	L1M2|LINE|L1	91423	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
31.8666-4	chr2	158160688	158160988	+	0.133333	NA	Intergenic	L2|LINE|L2	-5812	NR_038850	554201	Hs.570262	NR_038850	ENSG00000227480	CCDC148-AS1	-	CCDC148 antisense RNA 1	ncRNA
26.4333-15	chr5	58336814	58337234	+	0.133333	NA	Intergenic	L1MEc|LINE|L1	123062	NM_006622	10769	Hs.398157	NM_006622	ENSG00000145632	PLK2	SNK|hPlk2|hSNK	polo like kinase 2	protein-coding
44.6	chr1	169081799	169082307	+	0.133333	NA	intron (NR_104091, intron 1 of 4)	intron (NR_104091, intron 1 of 4)	4952	NR_104091	101978719	Hs.517849	NR_104091	ENSG00000203601	LINC00970	-	long intergenic non-protein coding RNA 970	ncRNA
23.5333-17	chr8	61763976	61764201	+	0.133333	NA	Intergenic	Intergenic	49300	NR_039680	100616484		NR_039680	ENSG00000264408	MIR4470	mir-4470	microRNA 4470	ncRNA
39.5333-2	chr11	13126434	13127017	+	0.133333	NA	Intergenic	Intergenic	117409	NM_001080521	644943	Hs.134650	NM_001080521	ENSG00000189431	RASSF10	-	Ras association domain family member 10	protein-coding
27.3333-10	chr8	110777153	110777741	+	0.133333	NA	Intergenic	Intergenic	249986	NR_125417	101927459	Hs.575543	NR_125416	ENSG00000253877	LINC01608	-	long intergenic non-protein coding RNA 1608	ncRNA
22.4-19	chr8	104487050	104487294	+	0.133333	NA	Intergenic	L1M5|LINE|L1	-2707	NR_030330	693127		NR_030330	ENSG00000208032	MIR548A3	MIRN548A3	microRNA 548a-3	ncRNA
23.9333-11	chr4	102660177	102660406	+	0.133333	NA	intron (NM_005908, intron 11 of 16)	intron (NM_005908, intron 11 of 16)	100677	NM_005908	4126	Hs.480415	NM_005908	ENSG00000109323	MANBA	MANB1	mannosidase beta	protein-coding
52.7999-2	chr21	18719084	18719603	+	0.133333	NA	intron (NR_109925, intron 2 of 3)	MER21C|LTR|ERVL	-33179	NR_036166	100422920		NR_036166	ENSG00000265841	MIR548X	-	microRNA 548x	ncRNA
23.7-10	chr5	9413219	9413577	+	0.133333	NA	intron (NM_003966, intron 2 of 22)	intron (NM_003966, intron 2 of 22)	-97935	NR_109935	101929338	Hs.675861	NR_109935	ENSG00000251370	SEMA5A-AS1	CTD-2201E9.1	SEMA5A antisense RNA 1	ncRNA
20.2667-10	chr7	25207279	25207563	+	0.133333	NA	Intergenic	Intergenic	21065	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding
25.6666-7	chr7	83133454	83133728	+	0.133333	NA	intron (NM_033026, intron 3 of 24)	intron (NM_033026, intron 3 of 24)	29293	NM_014510	27445	Hs.12376	NM_014510	ENSG00000186472	PCLO	ACZ|PCH3	piccolo presynaptic cytomatrix protein	protein-coding
20.6-9	chr4	57656411	57656698	+	0.133333	NA	Intergenic	L2c|LINE|L2	230682	NR_125907	101928851	Hs.555072	NR_125907	ENSG00000248505	LINC02380	-	long intergenic non-protein coding RNA 2380	ncRNA
15.1-2	chr1	90025222	90025399	+	0.133333	NA	intron (NM_001320185, intron 11 of 11)	intron (NM_001320185, intron 11 of 11)	30200	NM_181781	284695	Hs.306221	NM_181781	ENSG00000162664	ZNF326	ZAN75|ZIRD|Zfp326|dJ871E2.1	zinc finger protein 326	protein-coding
27.0333-2	chr1	217855603	217856178	+	0.133333	NA	intron (NM_138796, intron 9 of 10)	AluSc|SINE|Alu	-37010	NR_048550	100885798	Hs.434632	NR_048550	ENSG00000231814	LINC00210	NCRNA00210	long intergenic non-protein coding RNA 210	ncRNA
24.7-5	chr18	77575881	77576396	+	0.133333	NA	Intergenic	Intergenic	326290	NM_001480	2587	Hs.272191	NM_001480	ENSG00000166573	GALR1	GALNR|GALNR1	galanin receptor 1	protein-coding
31.5-6	chr14	101777732	101778333	+	0.133333	NA	intron (NM_001352915, intron 2 of 14)	AluJo|SINE|Alu	15662	NM_001352915	5527	Hs.368264	NM_002719	ENSG00000078304	PPP2R5C	B56G|B56gamma|PR61G	protein phosphatase 2 regulatory subunit B'gamma	protein-coding
27.5333-15	chr7	70826472	70827082	+	0.133333	NA	Intergenic	Intergenic	-305367	NM_022479	64409	Hs.488591	NM_022479	ENSG00000185274	GALNT17	GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17	polypeptide N-acetylgalactosaminyltransferase 17	protein-coding
29.4666	chr1	203180411	203180863	+	0.133333	NA	exon (NM_001276, exon 8 of 10)	exon (NM_001276, exon 8 of 10)	-4811	NM_004997	4608	Hs.927	NM_004997	ENSG00000133055	MYBPH	-	myosin binding protein H	protein-coding
25.6667-9	chr4	147661030	147661349	+	0.133333	NA	intron (NM_001350144, intron 4 of 10)	L1ME3A|LINE|L1	22974	NM_138364	90826	Hs.591692	NM_138364	ENSG00000164169	PRMT9	PRMT10	protein arginine methyltransferase 9	protein-coding
20.9333	chr1	109776018	109776327	+	0.133333	NA	Intergenic	Intergenic	-12249	NM_024526	79574	Hs.485352	NM_024526	ENSG00000198758	EPS8L3	EPS8R3	EPS8 like 3	protein-coding
41-4	chr17	61219917	61220484	+	0.133333	NA	intron (NM_001330413, intron 23 of 25)	AluSg|SINE|Alu	147504	NR_136397	101927855	Hs.662123	NR_136397	ENSG00000267131	LOC101927855	-	uncharacterized LOC101927855	ncRNA
46.4666-2	chr8	120001534	120002164	+	0.133333	NA	intron (NM_022783, intron 5 of 8)	intron (NM_022783, intron 5 of 8)	-123253	NM_021110	7373	Hs.409662	NM_021110	ENSG00000187955	COL14A1	UND	collagen type XIV alpha 1 chain	protein-coding
20.0333-2	chr1	98278420	98278748	+	0.133333	NA	Intergenic	Charlie7|DNA|hAT-Charlie	67873	NR_046088	729987	Hs.683961	NR_046088	ENSG00000226053	LINC01776	-	long intergenic non-protein coding RNA 1776	ncRNA
12.2	chr11	63279884	63279988	+	0.133333	NA	Intergenic	L1M2|LINE|L1	-9967	NM_001039752	387775	Hs.188982	NM_001039752	ENSG00000184999	SLC22A10	OAT5|hOAT5	solute carrier family 22 member 10	protein-coding
17.6333-2	chr10	102856575	102856720	+	0.133333	NA	intron (NM_001136200, intron 1 of 4)	Tigger13a|DNA|TcMar-Tigger	2388	NM_144591	119032	Hs.34492	NM_144591	ENSG00000166275	BORCS7	C10orf32	BLOC-1 related complex subunit 7	protein-coding
30.6999	chr10	100507251	100507799	+	0.133333	NA	exon (NM_015490, exon 7 of 26)	exon (NM_015490, exon 7 of 26)	12336	NM_015490	25956	Hs.18889	NM_015490	ENSG00000075826	SEC31B	SEC31B-1|SEC31L2	SEC31 homolog B, COPII coat complex component	protein-coding
16.6-14	chr7	35515805	35515945	+	0.133333	NA	Intergenic	L1MB3|LINE|L1	179260	NM_022373	64224	Hs.643051	NM_022373	ENSG00000122557	HERPUD2	-	HERPUD family member 2	protein-coding
23.5333-9	chr3	40039591	40039803	+	0.133333	NA	intron (NM_001284424, intron 2 of 15)	L2|LINE|L2	-60314	NM_001284426	25924	Hs.594535	NM_015460	ENSG00000170011	MYRIP	SLAC2-C|SLAC2C	myosin VIIA and Rab interacting protein	protein-coding
24.6-7	chr3	83677035	83677335	+	0.133333	NA	Intergenic	Intergenic	1192390	NR_033860	440970	Hs.411049	NR_033860	ENSG00000242641	LINC00971	-	long intergenic non-protein coding RNA 971	ncRNA
40.6666-6	chr7	84369791	84370156	+	0.133333	NA	Intergenic	L2a|LINE|L2	-162503	NR_110080	101927378	Hs.539042	NR_110079	ENSG00000235139	LOC101927378	-	uncharacterized LOC101927378	ncRNA
45.2666	chr1	34161986	34162518	+	0.133333	NA	intron (NM_052896, intron 1 of 69)	L2c|LINE|L2	3022	NM_001281956	114784	Hs.656915	NM_052896	ENSG00000121904	CSMD2	dJ1007G16.1|dJ1007G16.2|dJ947L8.1	CUB and Sushi multiple domains 2	protein-coding
28.8-9	chr21	38641561	38641875	+	0.133333	NA	intron (NM_001243432, intron 1 of 11)	intron (NM_001243432, intron 1 of 11)	18949	NM_001243428	2078	Hs.473819	NM_004449	ENSG00000157554	ERG	erg-3|p55	ETS transcription factor ERG	protein-coding
25-19	chr9	106112662	106112975	+	0.133333	NA	Intergenic	MamGypLTR1b|LTR|Gypsy	418277	NM_018112	55151	Hs.411925	NM_018112	ENSG00000095209	TMEM38B	C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1	transmembrane protein 38B	protein-coding
12.2333	chr1	190208113	190208205	+	0.133333	NA	intron (NM_199051, intron 6 of 7)	AluJr|SINE|Alu	267851	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
24-2	chr12	131999430	131999740	+	0.133333	NA	intron (NM_015409, intron 12 of 52)	AluSx1|SINE|Alu	-31639	NR_002979	677829	Hs.742405	NR_002979	ENSG00000208892	SNORA49	ACA49	small nucleolar RNA, H/ACA box 49	snoRNA
26.5999	chr15	70464876	70465271	+	0.133333	NA	Intergenic	Intergenic	40855	NR_146562	105370880		NR_146562	ENSG00000259473	LINC02205	-	long intergenic non-protein coding RNA 2205	ncRNA
16.2-2	chr10	50425606	50425887	+	0.133333	NA	intron (NM_147156, intron 6 of 10)	L1PA16|LINE|L1	-177136	NM_001143974	56624	Hs.512645	NM_019893	ENSG00000188611	ASAH2	BCDase|HNAC1|LCDase|N-CDase|NCDase	N-acylsphingosine amidohydrolase 2	protein-coding
14.9333-5	chr10	115112249	115112420	+	0.133333	NA	intron (NR_074088, intron 2 of 9)	L1MA7|LINE|L1	18969	NM_001276282	26033	Hs.501127	NM_207303	ENSG00000107518	ATRNL1	ALP|bA338L11.1|bA454H24.1	attractin like 1	protein-coding
8.93331	chr8	101612459	101612526	+	0.133333	NA	intron (NM_024915, intron 8 of 15)	(TAGA)n|Simple_repeat|Simple_repeat	120053	NM_001330593	79977	Hs.661088	NM_024915	ENSG00000083307	GRHL2	BOM|DFNA28|ECTDS|PPCD4|TFCP2L3	grainyhead like transcription factor 2	protein-coding
41.7-8	chr4	152605640	152606326	+	0.133333	NA	Intergenic	Intergenic	69555	NR_039658	100616193		NR_039658	ENSG00000283792	MIR4453	-	microRNA 4453	ncRNA
27.8333-2	chr11	116135080	116135689	+	0.133333	NA	Intergenic	Intergenic	-375184	NR_034148	283143	Hs.130499	NR_034148		LINC00900	-	long intergenic non-protein coding RNA 900	ncRNA
12.0667-11	chr3	188707986	188708122	+	0.133333	NA	intron (NM_005578, intron 6 of 10)	intron (NM_005578, intron 6 of 10)	19273	NR_029502	407020		NR_029502	ENSG00000207651	MIR28	MIRN28|hsa-mir-28|miR-28	microRNA 28	ncRNA
29.7666	chr2	219389798	219390245	+	0.133333	NA	intron (NM_001319116, intron 1 of 14)	intron (NM_001319116, intron 1 of 14)	-1145	NM_001319121	23549	Hs.258551	NM_012100	ENSG00000123992	DNPEP	ASPEP|DAP	aspartyl aminopeptidase	protein-coding
30.4666-3	chr5	169104218	169104552	+	0.133333	NA	intron (NM_003062, intron 4 of 35)	intron (NM_003062, intron 4 of 35)	91158	NR_109897	728095	Hs.145601	NR_109897		LOC728095	-	uncharacterized LOC728095	ncRNA
44.0333-4	chr4	71558679	71559053	+	0.133333	NA	intron (NM_003759, intron 19 of 22)	intron (NM_003759, intron 19 of 22)	219813	NM_003759	8671	Hs.5462	NM_003759	ENSG00000080493	SLC4A4	HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC	solute carrier family 4 member 4	protein-coding
46.4999	chr1	218423046	218423527	+	0.133333	NA	intron (NR_138148, intron 2 of 6)	intron (NR_138148, intron 2 of 6)	-14347	NR_031644	100302159		NR_031644	ENSG00000221436	MIR548F3	MIR548F-3|MIRN548F3|hsa-mir-548f-3	microRNA 548f-3	ncRNA
22.8666-4	chr1	241752008	241752217	+	0.133333	NA	intron (NM_001367482, intron 14 of 27)	intron (NM_001367482, intron 14 of 27)	-96079	NM_001319224	9156	Hs.498248	NM_003686	ENSG00000174371	EXO1	HEX1|hExoI	exonuclease 1	protein-coding
29-2	chr1	188599691	188600038	+	0.133333	NA	Intergenic	Intergenic	1156236	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
28.9333-5	chr17	74942998	74943494	+	0.133333	NA	intron (NM_178233, intron 3 of 6)	intron (NM_178233, intron 3 of 6)	7348	NM_001272005	347741	Hs.454407	NM_178233	ENSG00000182938	OTOP3	-	otopetrin 3	protein-coding
30.6667-3	chr18	71983947	71984405	+	0.133333	NA	Intergenic	Intergenic	-201950	NR_126324	102724913		NR_126324	ENSG00000265352	LINC01899	-	long intergenic non-protein coding RNA 1899	ncRNA
49-2	chr10	36303389	36304042	+	0.133333	NA	Intergenic	Intergenic	525413	NR_110138	102578074		NR_110138	ENSG00000280719	PCAT5	LINC01452|TPCAT-10-36067	prostate cancer associated transcript 5	ncRNA
18.9333-7	chr18	76283891	76284076	+	0.133333	NA	Intergenic	Intergenic	74473	NR_146507	105372207	Hs.303880	NR_146507		LINC01893	-	long intergenic non-protein coding RNA 1893	ncRNA
53.4666-2	chr7	92690336	92690968	+	0.133333	NA	intron (NM_001259, intron 4 of 7)	MER103C|DNA|hAT-Charlie	-100262	NR_109929	257415	Hs.18564	NM_152789	ENSG00000234545	FAM133B	-	family with sequence similarity 133 member B	protein-coding
25.4667-6	chr3	18222983	18223291	+	0.133333	NA	intron (NR_161333, intron 4 of 4)	intron (NR_161333, intron 4 of 4)	202202	NM_002971	6304	Hs.517717	NM_002971	ENSG00000182568	SATB1	-	SATB homeobox 1	protein-coding
22.4666-2	chr2	70038317	70038576	+	0.133333	NA	intron (NR_033872, intron 6 of 10)	AluJr4|SINE|Alu	48569	NR_033872	400960	Hs.683864	NR_033872	ENSG00000179818	PCBP1-AS1	-	PCBP1 antisense RNA 1	ncRNA
40.1666-4	chr9	102467973	102468337	+	0.133333	NA	Intergenic	L1PA12|LINE|L1	-51482	NR_103830	414319	Hs.385790	NR_103830	ENSG00000204250	LINC00587	C9orf107|bA785H23.1	long intergenic non-protein coding RNA 587	ncRNA
39.7-4	chr2	57778866	57779301	+	0.133333	NA	Intergenic	L1ME3E|LINE|L1	-128568	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
41.5666-5	chr9	30735556	30735971	+	0.133333	NA	Intergenic	Intergenic	-327309	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
47.8666-2	chr6	41967074	41967553	+	0.133333	NA	intron (NM_001136017, intron 1 of 4)	(AATG)n|Simple_repeat|Simple_repeat	-25465	NM_001136125	896	Hs.534307	NM_001760	ENSG00000112576	CCND3	-	cyclin D3	protein-coding
27.1666	chr1	216400817	216401260	+	0.133333	NA	intron (NM_206933, intron 3 of 71)	L1MDa|LINE|L1	22358	NM_007123	7399	Hs.655974	NM_007123	ENSG00000042781	USH2A	RP39|US2|USH2|dJ1111A8.1	usherin	protein-coding
28.3666-2	chr11	112735126	112735384	+	0.133333	NA	Intergenic	Intergenic	-179453	NR_104155	387810	Hs.512255	NR_104155	ENSG00000255484	LINC02764	-	long intergenic non-protein coding RNA 2764	ncRNA
30.3333-10	chr9	2262585	2263030	+	0.133333	NA	Intergenic	Intergenic	104351	NM_001289400	6595	Hs.298990	NM_003070	ENSG00000080503	SMARCA2	BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
15.8-6	chr16	77150779	77150968	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-40317	NM_001286640	22879	Hs.513743	NM_014940	ENSG00000103111	MON1B	HSRG1|SAND2|SRG1	MON1 homolog B, secretory trafficking associated	protein-coding
24-22	chr9	89338338	89338531	+	0.133333	NA	intron (NM_001282688, intron 7 of 16)	intron (NM_001282688, intron 7 of 16)	19583	NM_001282690	79048	Hs.59804	NM_024077	ENSG00000187742	SECISBP2	SBP2	SECIS binding protein 2	protein-coding
6.23332	chr12	69952762	69952824	+	0.133333	NA	intron (NM_182530, intron 20 of 24)	intron (NM_182530, intron 20 of 24)	127566	NM_182530	196446	Hs.253773	NM_182530	ENSG00000166268	MYRFL	C12orf15|C12orf28|bcm1377	myelin regulatory factor like	protein-coding
34.1666	chr13	35953974	35954530	+	0.133333	NA	intron (NM_001330071, intron 3 of 16)	intron (NM_001330071, intron 3 of 16)	-98391	NM_001195415	9201	Hs.507755	NM_004734	ENSG00000133083	DCLK1	CL1|CLICK1|DCAMKL1|DCDC3A|DCLK	doublecortin like kinase 1	protein-coding
42-5	chr3	140960770	140961271	+	0.133333	NA	intron (NM_001104647, intron 3 of 6)	intron (NM_001104647, intron 3 of 6)	19184	NM_001104647	55186	Hs.144130	NM_018155	ENSG00000114120	SLC25A36	PNC2	solute carrier family 25 member 36	protein-coding
41.1666	chr1	41471051	41471635	+	0.133333	NA	Intergenic	AluSx3|SINE|Alu	13340	NR_126098	1907	Hs.1407	NM_001956	ENSG00000127129	EDN2	ET-2|ET2|PPET2	endothelin 2	protein-coding
22.2666-4	chr6	52203796	52204241	+	0.133333	NA	Intergenic	L1M6|LINE|L1	17643	NM_002190	3605	Hs.41724	NM_002190	ENSG00000112115	IL17A	CTLA-8|CTLA8|IL-17|IL-17A|IL17	interleukin 17A	protein-coding
28.7666	chr10	32041191	32041422	+	0.133333	NA	intron (NM_004521, intron 2 of 25)	intron (NM_004521, intron 2 of 25)	15119	NM_004521	3799	Hs.327736	NM_004521	ENSG00000170759	KIF5B	HEL-S-61|KINH|KNS|KNS1|UKHC	kinesin family member 5B	protein-coding
20.7333-15	chr5	28379954	28380248	+	0.133333	NA	Intergenic	Intergenic	-92436	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
27.8999-2	chr16	49386546	49386829	+	0.133333	NA	intron (NM_144602, intron 3 of 4)	L1PREC2|LINE|L1	12883	NM_144602	123970	Hs.125875	NM_144602	ENSG00000166152	C16orf78	-	chromosome 16 open reading frame 78	protein-coding
32-5	chr15	69544872	69545222	+	0.133333	NA	Intergenic	Intergenic	-16673	NR_026979	145837	Hs.410126	NR_026979		DRAIC	-	downregulated RNA in cancer, inhibitor of cell invasion and migration	ncRNA
48.1333-4	chr5	37243269	37243972	+	0.133333	NA	intron (NM_023073, intron 5 of 51)	intron (NM_023073, intron 5 of 51)	-5426	NR_134263	105374727	Hs.170993	NR_134263	ENSG00000286193	LOC105374727	-	uncharacterized LOC105374727	ncRNA
33.1-10	chr9	85287065	85287346	+	0.133333	NA	Intergenic	Intergenic	454824	NM_001286715	23287	Hs.719980	NM_015239	ENSG00000135049	AGTPBP1	CCP1|CONDCA|NNA1	ATP/GTP binding protein 1	protein-coding
19.7333-2	chr13	73125425	73125670	+	0.133333	NA	Intergenic	Intergenic	66542	NM_001730	688	Hs.508234	NM_001730	ENSG00000102554	KLF5	BTEB2|CKLF|IKLF	Kruppel like factor 5	protein-coding
42-4	chr3	114464024	114464420	+	0.133333	NA	intron (NR_121661, intron 1 of 2)	intron (NR_121661, intron 1 of 2)	10629	NR_121661	101929754	Hs.614195	NR_121661	ENSG00000242290	ZBTB20-AS5	-	ZBTB20 antisense RNA 5	ncRNA
18.1-4	chr12	63781548	63781798	+	0.133333	NA	intron (NM_014254, intron 2 of 5)	MER103C|DNA|hAT-Charlie	1547	NM_001278237	10329	Hs.216386	NM_014254	ENSG00000118600	RXYLT1	HP10481|MDDGA10|TMEM5	ribitol xylosyltransferase 1	protein-coding
9.36666-2	chr15	45635977	45636173	+	0.133333	NA	intron (NM_021199, intron 1 of 9)	AluSx1|SINE|Alu	1046	NM_021199	58472	Hs.511251	NM_021199	ENSG00000137767	SQOR	CGI-44|PRO1975|SQR|SQRDL	sulfide quinone oxidoreductase	protein-coding
26.8	chr1	48579990	48580346	+	0.133333	NA	intron (NM_001323575, intron 11 of 12)	intron (NM_001323575, intron 11 of 12)	-107960	NM_001286239	54558	Hs.538103	NM_019073	ENSG00000132122	SPATA6	HASH|SRF-1|SRF1	spermatogenesis associated 6	protein-coding
25.6-4	chr12	50884335	50884772	+	0.133333	NA	intron (NM_182559, intron 3 of 4)	L1M5|LINE|L1	-40462	NM_014033	25840	Hs.711113	NM_014033	ENSG00000185432	METTL7A	AAM-B|AAMB	methyltransferase like 7A	protein-coding
32.5-2	chr12	29534245	29534525	+	0.133333	NA	intron (NM_001367875, intron 13 of 19)	intron (NM_001367875, intron 13 of 19)	-34692	NM_001353179	341350	Hs.674588	NM_183378	ENSG00000187950	OVCH1	OVCH	ovochymase 1	protein-coding
16.5-8	chr3	54046650	54046925	+	0.133333	NA	Intergenic	MIR3|SINE|MIR	-75765	NM_018398	55799	Hs.656687	NM_018398	ENSG00000157445	CACNA2D3	HSA272268	calcium voltage-gated channel auxiliary subunit alpha2delta 3	protein-coding
35.9	chr12	14949729	14950155	+	0.133333	NA	intron (NM_001321421, intron 2 of 5)	intron (NM_001321421, intron 2 of 5)	-1046	NR_135637	397	Hs.504877	NM_001175	ENSG00000111348	ARHGDIB	D4|GDIA2|GDID4|LYGDI|Ly-GDI|RAP1GN1|RhoGDI2	Rho GDP dissociation inhibitor beta	protein-coding
50.0999-2	chr21	19623414	19623989	+	0.133333	NA	Intergenic	MER57B1|LTR|ERV1	276054	NR_146910	105372746	Hs.580899	NR_146910	ENSG00000233480	LINC01683	C21orf40	long intergenic non-protein coding RNA 1683	ncRNA
41.1333-6	chr17	63419668	63420050	+	0.133333	NA	intron (NM_025185, intron 25 of 25)	intron (NM_025185, intron 25 of 25)	20408	NM_001330421	1534	Hs.355264	NM_001915	ENSG00000008283	CYB561	CYB561A1|FRRS2|ORTHYP2	cytochrome b561	protein-coding
35.7999-2	chr4	110230218	110230629	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-31808	NM_024090	79071	Hs.412939	NM_024090	ENSG00000170522	ELOVL6	FACE|FAE|LCE	ELOVL fatty acid elongase 6	protein-coding
28.7333	chr1	44056256	44056544	+	0.133333	NA	Intergenic	MER66-int|LTR|ERV1	-24938	NM_001328626	6536	Hs.442590	NM_006934	ENSG00000196517	SLC6A9	GCENSG|GLYT1	solute carrier family 6 member 9	protein-coding
14.8666	chr11	38895212	38895381	+	0.133333	NA	Intergenic	MLT1H-int|LTR|ERVL-MaLR	246438	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
38.2666-3	chr22	28573296	28573791	+	0.133333	NA	intron (NM_001145418, intron 2 of 22)	intron (NM_001145418, intron 2 of 22)	106322	NM_001145418	23331	Hs.387856	NM_015281	ENSG00000100154	TTC28	TPRBK	tetratricopeptide repeat domain 28	protein-coding
42.6999	chr14	26945572	26946037	+	0.133333	NA	Intergenic	Intergenic	37162	NR_036193	100423019		NR_036193	ENSG00000265165	MIR4307	-	microRNA 4307	ncRNA
17.9666-4	chr6	162756608	162756954	+	0.133333	NA	intron (NM_001080379, intron 1 of 4)	L1MA7|LINE|L1	28811	NM_001080379	135138	Hs.25791	NM_152410	ENSG00000112530	PACRG	GLUP|HAK005771|PACRG2.1|PARK2CRG	parkin coregulated	protein-coding
25.7333-3	chr1	163507109	163507454	+	0.133333	NA	Intergenic	Intergenic	-84090	NR_104294	100422212	Hs.556898	NR_104294		LOC100422212	-	eukaryotic translation initiation factor 3 subunit J pseudogene	pseudo
21.1333-11	chr2	99920979	99921178	+	0.133333	NA	intron (NM_001025108, intron 6 of 23)	L1ME2|LINE|L1	184505	NM_001025108	3899	Hs.444414	NM_002285	ENSG00000144218	AFF3	LAF4|MLLT2-like	AF4/FMR2 family member 3	protein-coding
14.9-13	chr8	60502686	60502946	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-14094	NM_001242644	5862	Hs.369017	NM_002865	ENSG00000104388	RAB2A	LHX|RAB2	RAB2A, member RAS oncogene family	protein-coding
30.7333	chr1	35300328	35300655	+	0.133333	NA	intron (NM_001350140, intron 2 of 27)	L1MEc|LINE|L1	31782	NM_005095	9202	Hs.269211	NM_005095	ENSG00000146463	ZMYM4	CDIR|MYM|ZNF198L3|ZNF262	zinc finger MYM-type containing 4	protein-coding
40.2666-2	chr15	101591443	101591929	+	0.133333	NA	Intergenic	L1MD1|LINE|L1	22653	NR_147041	101927505	Hs.578394	NR_147041		LINC02348	-	long intergenic non-protein coding RNA 2348	ncRNA
12.8666-3	chr8	140757496	140757626	+	0.133333	NA	intron (NR_148037, intron 19 of 34)	intron (NR_148037, intron 19 of 34)	-24908	NR_029892	442893		NR_029892	ENSG00000254324	MIR151A	MIR151|MIRN151|hsa-mir-151|hsa-mir-151a	microRNA 151a	ncRNA
21.1333-6	chr11	93079858	93080152	+	0.133333	NA	Intergenic	Intergenic	110382	NM_005959	4544	Hs.569039	NM_005959	ENSG00000134640	MTNR1B	FGQTL2|MEL-1B-R|MT2	melatonin receptor 1B	protein-coding
36-6	chr3	50268977	50269383	+	0.133333	NA	promoter-TSS (NM_001290061)	promoter-TSS (NM_001290061)	19	NM_001290061	7869	Hs.82222	NM_004636	ENSG00000012171	SEMA3B	LUCA-1|SEMA5|SEMAA|SemA|semaV	semaphorin 3B	protein-coding
27.4667	chr1	91567824	91568180	+	0.133333	NA	Intergenic	Intergenic	66894	NM_001134420	8317	Hs.533573	NM_003503	ENSG00000097046	CDC7	CDC7L1|HsCDC7|Hsk1|huCDC7	cell division cycle 7	protein-coding
20.8666-6	chr6	134341831	134342102	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	-23908	NM_001143676	6446	Hs.510078	NM_005627	ENSG00000118515	SGK1	SGK	serum/glucocorticoid regulated kinase 1	protein-coding
30.7333-6	chr2	186331587	186331969	+	0.133333	NA	Intergenic	L2c|LINE|L2	-154482	NM_018471	55854	Hs.741180	NM_018471	ENSG00000065548	ZC3H15	HT010|LEREPO4|MSTP012	zinc finger CCCH-type containing 15	protein-coding
26.6-8	chr16	71481082	71481456	+	0.133333	NA	intron (NM_006961, intron 3 of 5)	intron (NM_006961, intron 3 of 5)	8055	NM_006961	7567	Hs.660076	NM_006961	ENSG00000157429	ZNF19	KOX12	zinc finger protein 19	protein-coding
41.3333-5	chrX	44200404	44201002	+	0.133333	NA	intron (NM_025184, intron 11 of 14)	L1MEd|LINE|L1	142969	NM_025184	80258	Hs.521953	NM_025184	ENSG00000183690	EFHC2	MRX74|dJ1158H2.1	EF-hand domain containing 2	protein-coding
10.8333-2	chr14	56119741	56119822	+	0.133333	NA	intron (NM_021255, intron 1 of 5)	intron (NM_021255, intron 1 of 5)	1370	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding
51.7	chr14	73823201	73823873	+	0.133333	NA	intron (NR_135238, intron 1 of 1)	intron (NR_135238, intron 1 of 1)	6598	NR_135238	100506498	Hs.569330	NR_135238	ENSG00000258586	LINC02274	-	long intergenic non-protein coding RNA 2274	ncRNA
26.4999-2	chr19	33421686	33422048	+	0.133333	NA	intron (NM_001166056, intron 7 of 12)	L2a|LINE|L2	47343	NM_001252296	1054	Hs.429666	NM_001806	ENSG00000153879	CEBPG	GPE1BP|IG/EBP-1	CCAAT enhancer binding protein gamma	protein-coding
15.8666	chr12	15191083	15191221	+	0.133333	NA	intron (NM_032918, intron 2 of 4)	intron (NM_032918, intron 2 of 4)	30265	NM_032918	85004	Hs.199487	NM_032918	ENSG00000134533	RERG	-	RAS like estrogen regulated growth inhibitor	protein-coding
18.7333-16	chr3	76206757	76206960	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-421309	NM_001324026	100131827	Hs.556877	NM_001128223	ENSG00000227124	ZNF717	OB1|X17|ZNF838	zinc finger protein 717	protein-coding
32.4666-3	chr2	118286873	118287147	+	0.133333	NA	Intergenic	MER53|DNA|hAT	-100624	NR_144530	100506797	Hs.116176	NR_144530	ENSG00000226856	THORLNC	THOR	testis associated oncogenic lncRNA	ncRNA
20.6-14	chr8	105906363	105906656	+	0.133333	NA	intron (NR_125796, intron 2 of 7)	intron (NR_125796, intron 2 of 7)	153994	NR_125796	102723356	Hs.571413	NR_125796		ZFPM2-AS1	SCAT3	ZFPM2 antisense RNA 1	ncRNA
22.2667	chr11	96024290	96024578	+	0.133333	NA	intron (NM_032427, intron 2 of 4)	MIRc|SINE|MIR	-100227	NM_016156	8898	Hs.181326	NM_016156	ENSG00000087053	MTMR2	CMT4B|CMT4B1	myotubularin related protein 2	protein-coding
33.4333-10	chr6	55383414	55384062	+	0.133333	NA	intron (NM_207410, intron 6 of 8)	intron (NM_207410, intron 6 of 8)	56269	NM_207410	389400	Hs.526967	NM_207410	ENSG00000187871	GFRAL	C6orf144|GRAL|UNQ9356|bA360D14.1	GDNF family receptor alpha like	protein-coding
22.5-4	chr2	102564152	102564573	+	0.133333	NA	Intergenic	Intergenic	-55191	NM_003048	6549	Hs.250083	NM_003048	ENSG00000115616	SLC9A2	NHE2	solute carrier family 9 member A2	protein-coding
35.9333	chr2	15073956	15074296	+	0.133333	NA	Intergenic	L1M5|LINE|L1	441409	NR_144632	151354	Hs.260855	NM_145175	ENSG00000162981	LRATD1	FAM84A|NSE1|PP11517	LRAT domain containing 1	protein-coding
20.1333-16	chr7	34067390	34067596	+	0.133333	NA	intron (NM_133468, intron 12 of 15)	intron (NM_133468, intron 12 of 15)	161954	NM_001365308	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
24.6-12	chr7	85568139	85568418	+	0.133333	NA	Intergenic	Intergenic	147156	NR_134240	105375380	Hs.679608	NR_134240	ENSG00000225128	LINC00972	-	long intergenic non-protein coding RNA 972	ncRNA
46.5333-3	chr5	59365274	59365704	+	0.133333	NA	intron (NM_001165899, intron 3 of 16)	AluJb|SINE|Alu	-8519	NM_001197219	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
40.4	chr10	76208487	76208967	+	0.133333	NA	intron (NM_001305581, intron 5 of 6)	intron (NM_001305581, intron 5 of 6)	425966	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	LRMDA	C10orf11|CDA017	leucine rich melanocyte differentiation associated	protein-coding
40.5666	chr13	49816410	49816726	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	-23886	NM_002267	3839	Hs.527919	NM_002267	ENSG00000102753	KPNA3	IPOA4|SRP1|SRP1gamma|SRP4|hSRP1	karyopherin subunit alpha 3	protein-coding
21.2-21	chr6	139817990	139818175	+	0.133333	NA	intron (NR_038399, intron 1 of 2)	intron (NR_038399, intron 1 of 2)	-36768	NR_138542	100132735	Hs.62646	NR_038399	ENSG00000231426	FILNC1	-	FOXO induced long non-coding RNA 1	ncRNA
43.1333-5	chr18	355118	355686	+	0.133333	NA	intron (NM_130386, intron 3 of 9)	L2c|LINE|L2	-87355	NM_005131	9984	Hs.712543	NM_005131	ENSG00000079134	THOC1	HPR1|P84|P84N5	THO complex 1	protein-coding
26.0666-6	chr2	226514562	226514943	+	0.133333	NA	Intergenic	Intergenic	144041	NR_049887	100847053		NR_049887	ENSG00000263363	MIR5702	-	microRNA 5702	ncRNA
29.8667-3	chr20	14224388	14224807	+	0.133333	NA	intron (NM_001351663, intron 3 of 17)	LTR90B|LTR|LTR	113015	NM_198391	23767	Hs.41296	NM_013281	ENSG00000125848	FLRT3	HH21	fibronectin leucine rich transmembrane protein 3	protein-coding
23.3666	chr14	102940617	102940858	+	0.133333	NA	intron (NM_006035, intron 30 of 36)	intron (NM_006035, intron 30 of 36)	18081	NM_030943	81693	Hs.534494	NM_030943	ENSG00000166126	AMN	PRO1028|amnionless	amnion associated transmembrane protein	protein-coding
23.9333-13	chr6	65125662	65125892	+	0.133333	NA	intron (NM_001292009, intron 12 of 43)	LTR52|LTR|ERVL	-175641	NM_001271675	441155	Hs.546686	NM_001271675		LOC441155	-	zinc finger CCCH-type domain-containing-like	protein-coding
16.7666	chr1	177085580	177085716	+	0.133333	NA	intron (NM_207108, intron 1 of 21)	MIRc|SINE|MIR	-56203	NR_030163	574441		NR_030163	ENSG00000202609	MIR488	MIRN488|hsa-mir-488|mir-488	microRNA 488	ncRNA
39.8666	chr14	45905240	45905857	+	0.133333	NA	Intergenic	Intergenic	-158611	NR_102702	100506412	Hs.207545	NR_102699	ENSG00000258700	LINC00871	-	long intergenic non-protein coding RNA 871	ncRNA
38.4333	chr18	22351266	22351638	+	0.133333	NA	Intergenic	(TTTAT)n|Simple_repeat|Simple_repeat	66463	NM_172241	64693	Hs.406709	NM_022663	ENSG00000212710	CTAGE1	CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2	cutaneous T cell lymphoma-associated antigen 1	protein-coding
22.0666-5	chr5	139796572	139796806	+	0.133333	NA	intron (NM_032289, intron 1 of 14)	intron (NM_032289, intron 1 of 14)	881	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding
25.6666-2	chr10	65175662	65176146	+	0.133333	NA	Intergenic	L1PA15|LINE|L1	-251386	NR_134456	101928887	Hs.463900	NR_134456	ENSG00000224714	LINC02671	-	long intergenic non-protein coding RNA 2671	ncRNA
40.2-7	chr8	50278433	50278802	+	0.133333	NA	intron (NR_135797, intron 2 of 20)	intron (NR_135797, intron 2 of 20)	114486	NM_001321778	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
33.8-4	chr5	18278283	18278977	+	0.133333	NA	Intergenic	Intergenic	471356	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
30.2-3	chr16	47500871	47501202	+	0.133333	NA	intron (NM_001031835, intron 4 of 31)	intron (NM_001031835, intron 4 of 31)	39705	NM_000293	5257	Hs.78060	NM_000293	ENSG00000102893	PHKB	-	phosphorylase kinase regulatory subunit beta	protein-coding
32.8666-7	chr7	19612773	19613073	+	0.133333	NA	Intergenic	LTR33B|LTR|ERVL	92513	NR_036101	100422967		NR_036101	ENSG00000265932	MIR3146	mir-3146	microRNA 3146	ncRNA
27.3333-2	chr15	69855288	69855800	+	0.133333	NA	Intergenic	Intergenic	20310	NR_026764	414926	Hs.569502	NR_026764	ENSG00000245750	LINC00593	C15orf50	long intergenic non-protein coding RNA 593	ncRNA
11.6666	chr8	34226317	34226404	+	0.133333	NA	Intergenic	Intergenic	-557561	NR_125746	103689844	Hs.590682	NR_125746	ENSG00000254344	LINC01288	TCONS_00014671	long intergenic non-protein coding RNA 1288	ncRNA
38.3333-4	chr2	44884579	44884947	+	0.133333	NA	Intergenic	Intergenic	54125	NR_147194	107985879	Hs.436392	NR_147194	ENSG00000259439	LINC01833	K21.1|RP11-89	long intergenic non-protein coding RNA 1833	ncRNA
16.7333-12	chr5	172634060	172634252	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-7107	NM_001308177	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|RNF67B|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding
29.2666-3	chr2	229466439	229466788	+	0.133333	NA	intron (NM_139072, intron 7 of 12)	L2b|LINE|L2	-195326	NM_001330157	55022	Hs.745038	NM_017933	ENSG00000153823	PID1	HMFN2073|NYGGF4|P-CLI1|PCLI1	phosphotyrosine interaction domain containing 1	protein-coding
35.4666	chr1	33933565	33933938	+	0.133333	NA	intron (NM_052896, intron 4 of 69)	intron (NM_052896, intron 4 of 69)	64795	NR_038372	402779	Hs.666207	NR_038372	ENSG00000231163	CSMD2-AS1	-	CSMD2 antisense RNA 1	ncRNA
41.4333	chr2	14514090	14514509	+	0.133333	NA	Intergenic	Intergenic	-113341	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA
36.6-7	chr4	51965541	51965952	+	0.133333	NA	Intergenic	Intergenic	54617	NM_001024611	339977	Hs.661450	NM_001024611	ENSG00000188993	LRRC66	-	leucine rich repeat containing 66	protein-coding
22.8666-11	chr7	39714569	39714779	+	0.133333	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	-18894	NR_026999	349114	Hs.414183	NM_198284		LINC00265	NCRNA00265	long intergenic non-protein coding RNA 265	ncRNA
21.8-12	chr5	114343784	114344062	+	0.133333	NA	Intergenic	Intergenic	-18147	NM_021614	3781	Hs.98280	NM_021614	ENSG00000080709	KCNN2	KCa2.2|SK2|SKCA2|SKCa 2|hSK2	potassium calcium-activated channel subfamily N member 2	protein-coding
36.8666-3	chr2	227521545	227521992	+	0.133333	NA	intron (NM_004504, intron 3 of 12)	intron (NM_004504, intron 3 of 12)	49596	NM_001135187	3267	Hs.352962	NM_004504	ENSG00000173744	AGFG1	HRB|RAB|RIP	ArfGAP with FG repeats 1	protein-coding
22.4666-3	chr7	43536017	43536426	+	0.133333	NA	intron (NM_001287059, intron 22 of 27)	intron (NM_001287059, intron 22 of 27)	-13679	NR_038276	100506895	Hs.676047	NR_038276	ENSG00000231638	LUARIS	SCAT6|lncRNA32	lncRNA upregulator of antiviral response interferon signaling	ncRNA
28.2333-15	chr8	137483630	137483887	+	0.133333	NA	Intergenic	Intergenic	-70170	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
31.6333-2	chr13	35815874	35816408	+	0.133333	NA	intron (NM_001195415, intron 7 of 13)	intron (NM_001195415, intron 7 of 13)	39526	NM_001195416	9201	Hs.507755	NM_004734	ENSG00000133083	DCLK1	CL1|CLICK1|DCAMKL1|DCDC3A|DCLK	doublecortin like kinase 1	protein-coding
40.8333	chr10	68006405	68007005	+	0.133333	NA	intron (NM_001278185, intron 9 of 23)	L1MA3|LINE|L1	4178	NR_131184	100009667		NR_131184		POU5F1P5	Oct4-pg5	POU class 5 homeobox 1 pseudogene 5	pseudo
28.2333-5	chr16	79361481	79361991	+	0.133333	NA	Intergenic	Intergenic	239001	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding
21.2-18	chr4	78360125	78360356	+	0.133333	NA	intron (NM_001166133, intron 20 of 41)	intron (NM_001166133, intron 20 of 41)	71255	NR_145782	109623453		NR_145782		SNORD161	-	small nucleolar RNA, C/D box 161	snoRNA
24.0333-3	chr10	62283887	62284208	+	0.133333	NA	Intergenic	Intergenic	-15203	NM_145307	219790	Hs.58559	NM_145307	ENSG00000182010	RTKN2	PLEKHK1|bA531F24.1	rhotekin 2	protein-coding
18.2-15	chr8	92756393	92756698	+	0.133333	NA	intron (NR_046114, intron 1 of 2)	intron (NR_046114, intron 1 of 2)	29515	NR_046114	441369	Hs.521683	NR_046114	ENSG00000248858	FLJ46284	-	uncharacterized LOC441369	ncRNA
26.0666-5	chr19	41858893	41859232	+	0.133333	NA	Intergenic	Intergenic	-1193	NM_001321485	6223	Hs.438429	NM_001022	ENSG00000105372	RPS19	DBA|DBA1|S19|eS19	ribosomal protein S19	protein-coding
25.4-8	chr17	47110609	47110869	+	0.133333	NA	Intergenic	Intergenic	78556	NR_148340	996	Hs.463295	NM_001256	ENSG00000004897	CDC27	ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2	cell division cycle 27	protein-coding
28.5666	chr12	32706768	32707029	+	0.133333	NA	intron (NM_001330380, intron 3 of 18)	intron (NM_001330380, intron 3 of 18)	27597	NM_012062	10059	Hs.556296	NM_005690	ENSG00000087470	DNM1L	DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5	dynamin 1 like	protein-coding
31.4999	chr12	46661563	46661811	+	0.133333	NA	Intergenic	Intergenic	164310	NM_001143824	55089	Hs.446077	NM_018018	ENSG00000139209	SLC38A4	ATA3|NAT3|PAAT|SNAT4	solute carrier family 38 member 4	protein-coding
16.2666	chr20	47713449	47713584	+	0.133333	NA	intron (NM_198596, intron 3 of 20)	MIRc|SINE|MIR	72548	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding
26.9333-6	chr15	53055762	53056140	+	0.133333	NA	Intergenic	Intergenic	-60414	NR_147181	105370822	Hs.527821	NR_147181	ENSG00000259237	LINC02490	-	long intergenic non-protein coding RNA 2490	ncRNA
6.76665	chr19	49507959	49508011	+	0.133333	NA	Intergenic	(CTTTTT)n|Simple_repeat|Simple_repeat	-4676	NM_001136019	2217	Hs.111903	NM_004107	ENSG00000104870	FCGRT	FCRN|alpha-chain	Fc fragment of IgG receptor and transporter	protein-coding
33.6666-4	chr3	2504255	2504644	+	0.133333	NA	intron (NM_175607, intron 3 of 24)	intron (NM_175607, intron 3 of 24)	265620	NM_001206955	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
33.0666-6	chr5	125203329	125203701	+	0.133333	NA	intron (NR_109882, intron 4 of 5)	AluSg|SINE|Alu	166684	NR_109882	101927421	Hs.121305	NR_109882		LOC101927421	-	uncharacterized LOC101927421	ncRNA
45.1666	chr3	56471124	56471569	+	0.133333	NA	Intergenic	MLT1O|LTR|ERVL-MaLR	-2879	NM_015576	26059	Hs.476389	NM_015576	ENSG00000187672	ERC2	CAST|CAST1|ELKSL|SPBC110|Spc110	ELKS/RAB6-interacting/CAST family member 2	protein-coding
13.9333-10	chr7	140647745	140647884	+	0.133333	NA	Intergenic	Intergenic	-6354	NM_001318053	27147	Hs.6385	NM_015689	ENSG00000146966	DENND2A	FAM31D|KIAA1277	DENN domain containing 2A	protein-coding
27-12	chr17	62669575	62670002	+	0.133333	NA	intron (NM_006039, intron 6 of 29)	AluSz|SINE|Alu	-36418	NR_147886	105371855	Hs.446268	NR_147886	ENSG00000265702	LOC105371855	-	uncharacterized LOC105371855	ncRNA
47.0666	chr20	1166832	1167321	+	0.133333	NA	3' UTR (NM_001323407, exon 7 of 7)	3' UTR (NM_001323407, exon 7 of 7)	17397	NM_018354	55321	Hs.516834	NM_018354	ENSG00000125895	TMEM74B	C20orf46	transmembrane protein 74B	protein-coding
57.4999	chr19	49639569	49640167	+	0.133333	NA	intron (NM_006270, intron 1 of 5)	intron (NM_006270, intron 1 of 5)	275	NM_006270	6237	Hs.515536	NM_006270	ENSG00000126458	RRAS	R-Ras	RAS related	protein-coding
41.6667-4	chr20	46883192	46883797	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-11130	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding
25.4666-2	chr17	79107579	79107811	+	0.133333	NA	intron (NM_001082575, intron 5 of 14)	intron (NM_001082575, intron 5 of 14)	32758	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding
33.5666	chr1	8465589	8465999	+	0.133333	NA	intron (NM_001042681, intron 11 of 22)	intron (NM_001042681, intron 11 of 22)	29119	NR_132752	106632271		NR_132752		SNORD128	ZL43	small nucleolar RNA, C/D box 128	snoRNA
57.5333	chr11	42490672	42491484	+	0.133333	NA	Intergenic	Intergenic	-237388	NR_038309	100507205	Hs.99310	NR_038309		LINC02740	-	long intergenic non-protein coding RNA 2740	ncRNA
43.5333-4	chr16	50760495	50760982	+	0.133333	NA	intron (NM_015247, intron 7 of 19)	L1ME4b|LINE|L1	18433	NR_130462	100422972		NR_130462	ENSG00000264947	MIR3181	-	microRNA 3181	ncRNA
22.2-3	chr12	33741081	33741270	+	0.133333	NA	Intergenic	L1PA2|LINE|L1	-281321	NM_032834	84920	Hs.102971	NM_032834	ENSG00000139133	ALG10	ALG10A|DIE2|KCR1	ALG10 alpha-1,2-glucosyltransferase	protein-coding
26.4666-3	chr8	99007928	99008286	+	0.133333	NA	Intergenic	L1M5|LINE|L1	-5159	NR_047582	157680	Hs.191540	NM_015243	ENSG00000132549	VPS13B	CHS1|COH1	vacuolar protein sorting 13 homolog B	protein-coding
51.1333-2	chr3	39627404	39628077	+	0.133333	NA	Intergenic	L1MA4A|LINE|L1	125674	NM_001278323	4336	Hs.121333	NM_182935	ENSG00000168314	MOBP	-	myelin associated oligodendrocyte basic protein	protein-coding
33.6999	chr8	88806310	88806641	+	0.133333	NA	Intergenic	Intergenic	-478992	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
48.9332	chr1	195733917	195734366	+	0.133333	NA	Intergenic	MER50-int|LTR|ERV1	354574	NR_146895	105371673		NR_146895		LINC01724	-	long intergenic non-protein coding RNA 1724	ncRNA
23.8666-5	chr5	86116624	86116817	+	0.133333	NA	Intergenic	Intergenic	-165724	NR_003719	285622	Hs.449272	NR_003719		NBPF22P	-	NBPF member 22, pseudogene	pseudo
23.3-6	chr2	197103630	197104001	+	0.133333	NA	intron (NM_153697, intron 9 of 9)	L1ME4a|LINE|L1	-94176	NR_135584	101927596		NR_135584	ENSG00000231621	LOC101927596	-	uncharacterized LOC101927596	ncRNA
22.0333-8	chr7	52719604	52719899	+	0.133333	NA	Intergenic	Intergenic	-315882	NM_182595	285877	Hs.381970	NM_182595	ENSG00000221900	POM121L12	-	POM121 transmembrane nucleoporin like 12	protein-coding
27.5333-11	chr5	37984298	37984604	+	0.133333	NA	Intergenic	Intergenic	35960	NR_134262	105374729	Hs.150642	NR_134262	ENSG00000251518	LINC02110	-	long intergenic non-protein coding RNA 2110	ncRNA
27.2667-7	chr16	49174811	49175162	+	0.133333	NA	Intergenic	Intergenic	106852	NM_004352	869	Hs.458423	NM_004352	ENSG00000102924	CBLN1	-	cerebellin 1 precursor	protein-coding
31.8666-3	chr2	24684008	24684267	+	0.133333	NA	intron (NM_001362950, intron 8 of 23)	intron (NM_001362950, intron 8 of 23)	99660	NM_147233	8648	Hs.596314	NM_003743	ENSG00000084676	NCOA1	F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74	nuclear receptor coactivator 1	protein-coding
11.5666	chr1	31858315	31858481	+	0.133333	NA	Intergenic	MamRep1151|LTR?|LTR?	-42347	NM_144569	90853	Hs.62604	NM_144569	ENSG00000134668	SPOCD1	PPP1R146	SPOC domain containing 1	protein-coding
17.6667-5	chr20	11943109	11943348	+	0.133333	NA	Intergenic	Intergenic	25335	NM_014962	22903	Hs.709366	NM_014962	ENSG00000132640	BTBD3	dJ742J24.1	BTB domain containing 3	protein-coding
24.1333-11	chr6	150419606	150419825	+	0.133333	NA	Intergenic	THE1B|LTR|ERVL-MaLR	50703	NR_134655	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding
25.4666-5	chr8	121784607	121784853	+	0.133333	NA	Intergenic	Intergenic	-143290	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
25.9666	chr10	7039231	7039467	+	0.133333	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	147435	NR_132972	106635547		NR_132972		SNORD129	-	small nucleolar RNA, C/D box 129	snoRNA
40.4666	chr10	25120918	25121445	+	0.133333	NA	intron (NR_120649, intron 3 of 7)	L1PB4|LINE|L1	8123	NR_120649	101929025	Hs.553324	NR_120649	ENSG00000231422	LINC01516	-	long intergenic non-protein coding RNA 1516	ncRNA
24.6666	chr17	9032001	9032272	+	0.133333	NA	intron (NM_004822, intron 2 of 6)	intron (NM_004822, intron 2 of 6)	10626	NM_004822	9423	Hs.660885	NM_004822	ENSG00000065320	NTN1	MRMV4|NTN1L	netrin 1	protein-coding
35.1667-2	chr1	156024718	156025264	+	0.133333	NA	Intergenic	Intergenic	-4040	NM_003145	6746	Hs.74564	NM_003145	ENSG00000163479	SSR2	HSD25|TLAP|TRAP-BETA|TRAPB	signal sequence receptor subunit 2	protein-coding
41.1333-8	chr4	45413161	45413710	+	0.133333	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-686801	NR_073095	132789	Hs.21398	NM_138335	ENSG00000163281	GNPDA2	GNP2|SB52	glucosamine-6-phosphate deaminase 2	protein-coding
33.3333-3	chr12	45167584	45167882	+	0.133333	NA	Intergenic	Intergenic	48273	NR_037144	51054	Hs.233495	NM_015899	ENSG00000134297	PLEKHA8P1	FAPP-2|FAPP2|PLEKHA8|PLEKHA9|hFAPP2	pleckstrin homology domain containing A8 pseudogene 1	pseudo
19.6333-10	chr5	45411724	45411949	+	0.133333	NA	intron (NM_021072, intron 3 of 7)	intron (NM_021072, intron 3 of 7)	284544	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
28.0666-3	chr5	103177577	103177896	+	0.133333	NA	exon (NM_001345876, exon 22 of 29)	exon (NM_001345876, exon 22 of 29)	57435	NM_015216	23262	Hs.212046	NM_015216	ENSG00000145725	PPIP5K2	CFAP160|DFNB100|HISPPD1|IP7K2|VIP2	diphosphoinositol pentakisphosphate kinase 2	protein-coding
14.4-15	chr6	165464493	165464726	+	0.133333	NA	intron (NM_006661, intron 4 of 22)	L1ME2z|LINE|L1	-155004	NM_144980	168090	Hs.144734	NM_144980	ENSG00000112539	C6orf118	bA85G2.1|dJ416F21.2	chromosome 6 open reading frame 118	protein-coding
51.7666	chr12	13582171	13582810	+	0.133333	NA	intron (NM_000834, intron 9 of 12)	intron (NM_000834, intron 9 of 12)	-205745	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA
44-10	chr8	13660361	13660857	+	0.133333	NA	Intergenic	LTR84b|LTR|ERVL	30919	NR_134450	102725080	Hs.130621	NR_134450		LOC102725080	-	uncharacterized LOC102725080	ncRNA
40.7333-6	chr3	112999043	112999436	+	0.133333	NA	intron (NM_014170, intron 4 of 5)	intron (NM_014170, intron 4 of 5)	8255	NM_014170	29083	Hs.127496	NM_014170	ENSG00000163607	GTPBP8	HSPC135	GTP binding protein 8 (putative)	protein-coding
13.2333-6	chr20	34061174	34061289	+	0.133333	NA	intron (NM_007367, intron 2 of 8)	intron (NM_007367, intron 2 of 8)	12112	NR_039911	100616434		NR_039911	ENSG00000264616	MIR4755	mir-4755	microRNA 4755	ncRNA
34.8-6	chr2	238156283	238156768	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	-2445	NM_001291832	151176	Hs.24951	NM_152521	ENSG00000178752	ERFE	C1QTNF15|CTRP15|FAM132B	erythroferrone	protein-coding
39.6332	chr2	49164451	49164952	+	0.133333	NA	Intergenic	Intergenic	-10174	NM_000145	2492	Hs.1428	NM_000145	ENSG00000170820	FSHR	FSHR1|FSHRO|LGR1|ODG1	follicle stimulating hormone receptor	protein-coding
12.1-8	chr2	185681824	185682003	+	0.133333	NA	Intergenic	L2a|LINE|L2	56806	NR_110215	101927196	Hs.244783	NR_110214	ENSG00000226747	FSIP2-AS2	-	FSIP2 antisense RNA 2	ncRNA
33.4666-5	chr19	18314964	18315247	+	0.133333	NA	intron (NM_001252129, intron 1 of 3)	AluY|SINE|Alu	7971	NM_001252129	25804	Hs.515255	NM_012321	ENSG00000130520	LSM4	GRP|YER112W	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated	protein-coding
19.8	chr1	75676349	75676633	+	0.133333	NA	Intergenic	L1PA10|LINE|L1	-47856	NM_001286042	34	Hs.445040	NM_000016	ENSG00000117054	ACADM	ACAD1|MCAD|MCADH	acyl-CoA dehydrogenase medium chain	protein-coding
17.9-8	chr22	22910236	22910391	+	0.133333	NA	Intergenic	Intergenic	22497	NM_001178126	100423062	Hs.449574	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding
34.7999-2	chr18	1076279	1076609	+	0.133333	NA	Intergenic	Intergenic	-148451	NR_146724	388456	Hs.407666	NR_146724	ENSG00000259837	LINC01904	-	long intergenic non-protein coding RNA 1904	ncRNA
30.3333-5	chr17	80849342	80849656	+	0.133333	NA	intron (NM_020761, intron 11 of 33)	intron (NM_020761, intron 11 of 33)	-43867	NR_110852	101928855	Hs.670692	NR_110852	ENSG00000262833	LOC101928855	-	uncharacterized LOC101928855	ncRNA
22.9333-15	chr8	132336859	132337106	+	0.133333	NA	intron (NM_004519, intron 1 of 14)	intron (NM_004519, intron 1 of 14)	110280	NM_001204824	3786	Hs.374023	NM_004519	ENSG00000184156	KCNQ3	BFNC2|EBN2|KV7.3	potassium voltage-gated channel subfamily Q member 3	protein-coding
21.0666-4	chr5	21253510	21253969	+	0.133333	NA	Intergenic	Intergenic	-205741	NR_027027	728411	Hs.88181	NM_207331	ENSG00000183666	GUSBP1	-	GUSB pseudogene 1	pseudo
23.2-10	chr2	163758191	163758658	+	0.133333	NA	Intergenic	Intergenic	-22416	NM_018086	55137	Hs.593650	NM_018086	ENSG00000182263	FIGN	-	fidgetin, microtubule severing factor	protein-coding
40.6999	chr12	41390211	41390603	+	0.133333	NA	intron (NM_001164595, intron 3 of 9)	intron (NM_001164595, intron 3 of 9)	-47332	NM_013377	29951	Hs.380044	NM_013377	ENSG00000165966	PDZRN4	LNX4|SAMCAP3L	PDZ domain containing ring finger 4	protein-coding
63	chr8	78969986	78970839	+	0.133333	NA	Intergenic	L1M5|LINE|L1	132883	NR_157588	112935892		NR_157588		LINC02605	-	long intergenic non-protein coding RNA 2605	ncRNA
19-15	chr4	30282872	30283015	+	0.133333	NA	Intergenic	Intergenic	-437426	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
14.4333	chr12	63097059	63097279	+	0.133333	NA	Intergenic	Intergenic	55641	NM_000706	552	Hs.2131	NM_000706	ENSG00000166148	AVPR1A	AVPR V1a|AVPR1|V1aR	arginine vasopressin receptor 1A	protein-coding
15.7666	chr1	198238146	198238294	+	0.133333	NA	intron (NM_133494, intron 2 of 9)	L2|LINE|L2	81222	NM_133494	140609	Hs.24119	NM_133494	ENSG00000151414	NEK7	-	NIMA related kinase 7	protein-coding
27.4-3	chr10	126506286	126506804	+	0.133333	NA	intron (NM_001004298, intron 2 of 8)	MER5A|DNA|hAT-Charlie	14948	NM_001004298	118611	Hs.587663	NM_001004298	ENSG00000154493	C10orf90	FATS|bA422P15.2	chromosome 10 open reading frame 90	protein-coding
24.2333-2	chr14	78132582	78133005	+	0.133333	NA	Intergenic	Intergenic	-37580	NR_073547	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
17.4	chr1	34548813	34549042	+	0.133333	NA	Intergenic	HAL1|LINE|L1	120767	NR_030278	693137		NR_030278	ENSG00000207941	MIR552	MIRN552|hsa-mir-552	microRNA 552	ncRNA
20.2666-3	chr4	20970508	20970788	+	0.133333	NA	intron (NM_147182, intron 2 of 8)	MER20|DNA|hAT-Charlie	13361	NM_001363504	80333	Hs.655705	NM_025221	ENSG00000185774	KCNIP4	CALP|KCHIP4	potassium voltage-gated channel interacting protein 4	protein-coding
19.8666-4	chr20	36407502	36407680	+	0.133333	NA	intron (NM_001365621, intron 2 of 12)	L2b|LINE|L2	-53877	NM_001042486	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding
25.4-11	chr21	16744082	16744323	+	0.133333	NA	Intergenic	Intergenic	153965	NR_029694	406912		NR_029694	ENSG00000207863	MIR125B2	MIRN125B2|mir-125b-2	microRNA 125b-2	ncRNA
32.9999-2	chr4	115740458	115740769	+	0.133333	NA	Intergenic	L1MA4|LINE|L1	-559112	NR_031737	100302290		NR_031737	ENSG00000284253	MIR1973	hsa-mir-1973|mir-1973	microRNA 1973	ncRNA
15.6-8	chr22	34324867	34325094	+	0.133333	NA	Intergenic	HERVL18-int|LTR|ERVL	-402092	NM_001362949	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding
47-4	chr9	88459699	88460353	+	0.133333	NA	intron (NM_006717, intron 3 of 5)	L1M8|LINE|L1	71582	NM_006717	10927	Hs.146804	NM_006717	ENSG00000106723	SPIN1	SPIN|TDRD24	spindlin 1	protein-coding
25.4666-4	chr7	62755544	62755753	+	0.133333	NA	Intergenic	ALR/Alpha|Satellite|centr	548408	NR_003952	643955	Hs.583308	NR_003952	ENSG00000185037	ZNF733P	ZNF733	zinc finger protein 733, pseudogene	pseudo
34.6666-3	chr20	52786347	52786659	+	0.133333	NA	Intergenic	L2c|LINE|L2	165665	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA
24.5333-9	chr2	215792186	215792426	+	0.133333	NA	intron (NR_037195, intron 1 of 9)	intron (NR_037195, intron 1 of 9)	51230	NR_037195	646324	Hs.655713	NR_037195	ENSG00000235770	LINC00607	-	long intergenic non-protein coding RNA 607	ncRNA
42.8666-2	chr11	75238968	75239329	+	0.133333	NA	Intergenic	Intergenic	-1626	NM_001195528	100507050	Hs.577323	NM_001195528	ENSG00000261594	TPBGL	-	trophoblast glycoprotein like	protein-coding
43.9333	chr1	18411620	18412024	+	0.133333	NA	Intergenic	Intergenic	-69108	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding
27.2-12	chr8	96826575	96826979	+	0.133333	NA	intron (NM_016134, intron 2 of 7)	L1PA10|LINE|L1	181535	NM_016134	10404	Hs.156178	NM_016134	ENSG00000104324	CPQ	LDP|PGCP	carboxypeptidase Q	protein-coding
36.9666	chr8	32995464	32995764	+	0.133333	NA	Intergenic	L1MA2|LINE|L1	273779	NM_001322197	3084	Hs.453951	NM_004495	ENSG00000157168	NRG1	ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF	neuregulin 1	protein-coding
55.1334	chr2	70703308	70704111	+	0.133333	NA	intron (NM_017482, intron 4 of 12)	intron (NM_017482, intron 4 of 12)	64006	NM_001185054	119	Hs.66187	NM_001617	ENSG00000075340	ADD2	ADDB	adducin 2	protein-coding
20.6666	chr1	108480335	108480537	+	0.133333	NA	Intergenic	LTR36|LTR|ERV1	30154	NM_001143987	653149	Hs.712226	NM_001143987	ENSG00000186086	NBPF6	-	NBPF member 6	protein-coding
29.5333-4	chr2	13767935	13768294	+	0.133333	NA	Intergenic	MER45B|DNA|hAT-Tip100	632844	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA
24.6999-3	chr4	65300759	65301049	+	0.133333	NA	Intergenic	Intergenic	-296404	NR_033976	401134	Hs.165899	NR_033976	ENSG00000250125	LINC02232	-	long intergenic non-protein coding RNA 2232	ncRNA
27.6333-3	chr10	71593534	71593864	+	0.133333	NA	intron (NM_052836, intron 9 of 12)	L1ME3Cz|LINE|L1	-81779	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA
26	chr1	34283016	34283502	+	0.133333	NA	Intergenic	Intergenic	106352	NM_001134734	84970	Hs.194610	NM_032884	ENSG00000142698	C1orf94	-	chromosome 1 open reading frame 94	protein-coding
35.5333-8	chr3	44825422	44825749	+	0.133333	NA	intron (NM_020242, intron 20 of 34).2	intron (NM_020242, intron 20 of 34).2	-36303	NR_030290	693149		NR_030290	ENSG00000284498	MIR564	MIRN564|hsa-mir-564	microRNA 564	ncRNA
53.0333-2	chr10	103856725	103857351	+	0.133333	NA	Intergenic	Intergenic	-1632	NM_014631	9644	Hs.678727	NM_014631	ENSG00000107957	SH3PXD2A	FISH|SH3MD1|TKS5	SH3 and PX domains 2A	protein-coding
8.76666	chr14	77168327	77168454	+	0.133333	NA	Intergenic	Intergenic	-13408	NM_020431	57156	Hs.22452	NM_020431	ENSG00000165548	TMEM63C	C14orf171|CSC1|hsCSC1	transmembrane protein 63C	protein-coding
21.9333-18	chr6	8574420	8574846	+	0.133333	NA	intron (NR_038980, intron 3 of 4)	intron (NR_038980, intron 3 of 4)	-77576	NR_004855	728655	Hs.214343	NR_004855		HULC	HCCAT1|LINC00078|NCRNA00078	hepatocellular carcinoma up-regulated long non-coding RNA	ncRNA
21.6333-10	chr8	80845558	80845971	+	0.133333	NA	intron (NM_001033723, intron 1 of 8)	intron (NM_001033723, intron 1 of 8)	28704	NM_001367783	619279	Hs.434957	NM_032651	ENSG00000164684	ZNF704	Gig1	zinc finger protein 704	protein-coding
31.3666-3	chr6	13934859	13935280	+	0.133333	NA	intron (NM_001165033, intron 1 of 1)	L2c|LINE|L2	9876	NM_001165033	221687	Hs.111164	NM_152737	ENSG00000180537	RNF182	-	ring finger protein 182	protein-coding
37.8	chr10	54351225	54351729	+	0.133333	NA	intron (NM_001354411, intron 5 of 34)	intron (NM_001354411, intron 5 of 34)	-134753	NR_134503	105378311	Hs.623892	NR_134503	ENSG00000234173	LOC105378311	-	uncharacterized LOC105378311	ncRNA
21.8-8	chr2	185005729	185005992	+	0.133333	NA	Intergenic	L1MCb|LINE|L1	161212	NR_136319	105373782	Hs.128285	NR_136319		LOC105373782	-	uncharacterized LOC105373782	ncRNA
34.6-9	chr3	51891428	51891821	+	0.133333	NA	Intergenic	Intergenic	11729	NM_152397	132141	Hs.671210	NM_152397	ENSG00000173389	IQCF1	-	IQ motif containing F1	protein-coding
20.9-3	chr11	114396456	114396869	+	0.133333	NA	intron (NM_019021, intron 1 of 1)	intron (NM_019021, intron 1 of 1)	3849	NM_001271562	54494	Hs.715083	NM_019021	ENSG00000180425	C11orf71	URLC7	chromosome 11 open reading frame 71	protein-coding
27.4666-7	chr9	37300850	37301127	+	0.133333	NA	intron (NM_001289120, intron 2 of 8)	intron (NM_001289120, intron 2 of 8)	-121708	NM_012203	9380	Hs.155742	NM_012203	ENSG00000137106	GRHPR	GLXR|GLYD|PH2	glyoxylate and hydroxypyruvate reductase	protein-coding
43.6666-2	chr5	24887673	24888201	+	0.133333	NA	Intergenic	Intergenic	-47354	NR_037896	340107	Hs.145181	NR_037896	ENSG00000248908	LINC02239	-	long intergenic non-protein coding RNA 2239	ncRNA
17.4666-3	chr2	31961264	31961428	+	0.133333	NA	intron (NR_126034, intron 1 of 6)	AluSz|SINE|Alu	49318	NR_126032	51072	Hs.444969	NM_015955	ENSG00000162959	MEMO1	C2orf4|CGI-27|MEMO|NS5ATP7	mediator of cell motility 1	protein-coding
16.1-5	chr18	11869099	11869247	+	0.133333	NA	intron (NM_001369387, intron 9 of 11)	AluY|SINE|Alu	11420	NM_001261444	2774	Hs.136295	NM_002071	ENSG00000141404	GNAL	DYT25	G protein subunit alpha L	protein-coding
25.5666-5	chr3	52457391	52457592	+	0.133333	NA	intron (NM_007184, intron 1 of 20)	intron (NM_007184, intron 1 of 20)	1887	NM_007184	11188	Hs.435290	NM_007184	ENSG00000010322	NISCH	I-1|IR1|IRAS|hIRAS	nischarin	protein-coding
34.9332	chr18	52354814	52355123	+	0.133333	NA	intron (NM_005215, intron 1 of 28)	intron (NM_005215, intron 1 of 28)	14771	NM_005215	1630	Hs.162025	NM_005215	ENSG00000187323	DCC	CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1	DCC netrin 1 receptor	protein-coding
28.3333-3	chr14	53430463	53430794	+	0.133333	NA	Intergenic	L1M4|LINE|L1	277274	NR_110062	101927620		NR_110062	ENSG00000258731	LOC101927620	-	uncharacterized LOC101927620	ncRNA
19.5666	chr12	81184342	81184489	+	0.133333	NA	intron (NM_024560, intron 8 of 15)	L1MA9|LINE|L1	26027	NR_039848	100616133		NR_039848	ENSG00000265227	MIR4699	-	microRNA 4699	ncRNA
29.3333	chr10	12781332	12781776	+	0.133333	NA	intron (NM_001351032, intron 7 of 11)	intron (NM_001351032, intron 7 of 11)	-56201	NR_031752	100313841		NR_031752	ENSG00000221331	MIR548Q	-	microRNA 548q	ncRNA
8.66665	chr5	42730402	42730469	+	0.133333	NA	Intergenic	Intergenic	-26383	NM_001134848	100129792	Hs.745017	NM_001134848	ENSG00000198865	CCDC152	CH5400	coiled-coil domain containing 152	protein-coding
25.5666-8	chr8	52384112	52384347	+	0.133333	NA	intron (NR_148195, intron 2 of 3)	intron (NR_148195, intron 2 of 3)	25527	NM_001352883	9705	Hs.655499	NM_014682	ENSG00000147488	ST18	NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387	ST18 C2H2C-type zinc finger transcription factor	protein-coding
26.6-12	chr22	24865447	24865777	+	0.133333	NA	intron (NM_001098498, intron 9 of 23)	MIR3|SINE|MIR	59391	NM_133454	129049	Hs.474397	NM_133454	ENSG00000167037	SGSM1	RUTBC2	small G protein signaling modulator 1	protein-coding
50.8665	chr17	66522049	66522587	+	0.133333	NA	intron (NM_002737, intron 3 of 16)	intron (NM_002737, intron 3 of 16)	-105464	NR_110822	101928001	Hs.650730	NR_110822		PRKCA-AS1	-	PRKCA antisense RNA 1	ncRNA
27.8	chr1	44881233	44881527	+	0.133333	NA	intron (NM_001166588, intron 7 of 9)	intron (NM_001166588, intron 7 of 9)	-38127	NM_003738	8643	Hs.591497	NM_003738	ENSG00000117425	PTCH2	PTC2	patched 2	protein-coding
16.8333-11	chr5	102107131	102107307	+	0.133333	NA	Intergenic	L1M1|LINE|L1	189065	NM_180991	353189	Hs.127648	NM_180991	ENSG00000173930	SLCO4C1	OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20	solute carrier organic anion transporter family member 4C1	protein-coding
40.4667-2	chr5	58945698	58946237	+	0.133333	NA	Intergenic	Intergenic	53931	NM_001197223	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
23.3-7	chr20	11365891	11366223	+	0.133333	NA	Intergenic	Intergenic	-92674	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA
52.6667-2	chr12	37632934	37633679	+	0.133333	NA	Intergenic	ALR/Alpha|Satellite|centr	-683468	NM_001013620	144245	Hs.259305	NM_001013620	ENSG00000175548	ALG10B	ALG10|KCR1	ALG10 alpha-1,2-glucosyltransferase B	protein-coding
11.2-5	chrX	75166490	75166595	+	0.133333	NA	intron (NM_001363821, intron 2 of 9)	intron (NM_001363821, intron 2 of 9)	10173	NM_001363821	139596	Hs.91612	NM_145052	ENSG00000094841	UPRT	FUR1|UPP	uracil phosphoribosyltransferase homolog	protein-coding
13.9667-9	chrX	155609370	155609546	+	0.133333	NA	intron (NM_018196, intron 1 of 7)	L1PA15|LINE|L1	-3107	NM_001304990	10251	Hs.381912	NM_005840	ENSG00000168939	SPRY3	spry-3	sprouty RTK signaling antagonist 3	protein-coding
44.2332	chr2	112016955	112017375	+	0.133333	NA	intron (NM_006343, intron 15 of 18)	LTR12|LTR|ERV1	-38104	NM_032824	84910	Hs.656298	NM_032824	ENSG00000153214	TMEM87B	-	transmembrane protein 87B	protein-coding
31.2-18	chr7	2056084	2056696	+	0.133333	NA	intron (NM_001013837, intron 12 of 18)	intron (NM_001013837, intron 12 of 18)	32662	NR_145797	109623488		NR_145797		SNORA114	-	small nucleolar RNA, H/ACA box 114	snoRNA
20.6667-9	chr15	97231803	97232056	+	0.133333	NA	Intergenic	Intergenic	289882	NR_120324	101927286	Hs.611279	NR_120324	ENSG00000259664	LINC02254	-	long intergenic non-protein coding RNA 2254	ncRNA
14.2333-14	chr6	162861263	162861453	+	0.133333	NA	intron (NM_001080379, intron 2 of 4)	intron (NM_001080379, intron 2 of 4)	133388	NM_001080379	135138	Hs.25791	NM_152410	ENSG00000112530	PACRG	GLUP|HAK005771|PACRG2.1|PARK2CRG	parkin coregulated	protein-coding
42.7	chr1	83511021	83511582	+	0.133333	NA	Intergenic	Intergenic	65247	NR_146478	101927542	Hs.623976	NR_146478		LINC01712	-	long intergenic non-protein coding RNA 1712	ncRNA
22.3333-4	chr11	46965898	46966222	+	0.133333	NA	intron (NM_001278222, intron 1 of 7)	AluSc|SINE|Alu	29299	NM_001003678	79096	Hs.368296	NM_024113	ENSG00000149179	C11orf49	-	chromosome 11 open reading frame 49	protein-coding
16.8-9	chr7	63110210	63110430	+	0.133333	NA	Intergenic	L1ME3A|LINE|L1	193736	NR_003952	643955	Hs.583308	NR_003952	ENSG00000185037	ZNF733P	ZNF733	zinc finger protein 733, pseudogene	pseudo
33.3333-9	chr6	43321252	43321701	+	0.133333	NA	Intergenic	L1MB5|LINE|L1	-12650	NM_001366068	401262	Hs.653165	NM_206922	ENSG00000146215	CRIP3	CRP-3|TLP|TLP-A|h6LIMo	cysteine rich protein 3	protein-coding
43.8666-4	chr3	88367634	88368193	+	0.133333	NA	intron (NM_001368167, intron 2 of 2)	intron (NM_001368167, intron 2 of 2)	29457	NM_001368165	111064647		NM_001368165		CSNKA2IP	-	casein kinase 2 subunit alpha' interacting protein	protein-coding
29.3333-4	chr14	98654215	98654487	+	0.133333	NA	Intergenic	L1ME3Cz|LINE|L1	-57262	NR_161368	283598	Hs.448754	NM_182560	ENSG00000176605	C14orf177	-	chromosome 14 open reading frame 177	ncRNA
38.1333	chr14	52827183	52827584	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-35776	NM_198066	64841	Hs.478025	NM_198066	ENSG00000100522	GNPNAT1	GNA1|GNPNAT|Gpnat1	glucosamine-phosphate N-acetyltransferase 1	protein-coding
22.3333-9	chr17	54435162	54435375	+	0.133333	NA	Intergenic	L3b|LINE|CR1	-465423	NM_001321175	10040	Hs.153504	NM_005486	ENSG00000141198	TOM1L1	SRCASM	target of myb1 like 1 membrane trafficking protein	protein-coding
21.0666	chr16	87313922	87314247	+	0.133333	NA	intron (NM_001195124, intron 3 of 6)	L1ME1|LINE|L1	3308	NM_001195125	100506581	Hs.729380	NM_001195124	ENSG00000260456	C16orf95	-	chromosome 16 open reading frame 95	protein-coding
27.6999-3	chr7	113153352	113153711	+	0.133333	NA	Intergenic	Intergenic	-34949	NM_001352687	401397	Hs.117929	NM_001352687	ENSG00000214194	SMIM30	LINC00998	small integral membrane protein 30	protein-coding
33.7333-2	chr15	35140642	35140970	+	0.133333	NA	Intergenic	MLT2C2|LTR|ERVL	-55398	NM_001355281	388112	Hs.635882	NM_001355281	ENSG00000255192	NANOGP8	NANOGP1|PN8	Nanog homeobox retrogene P8	protein-coding
24.4666-2	chr10	86061945	86062396	+	0.133333	NA	intron (NM_017551, intron 4 of 15)	LTR16A2|LTR|ERVL	202618	NR_029907	442911		NR_029907	ENSG00000199104	MIR346	MIRN346|hsa-mir-346|miR-346|miRNA346	microRNA 346	ncRNA
39.4333-6	chr2	55628058	55628388	+	0.133333	NA	Intergenic	AluJo|SINE|Alu	-10601	NM_001282850	57223	Hs.516182	NM_020463	ENSG00000275052	PPP4R3B	FLFL2|PP4R3B|PSY2|SMEK2|smk1	protein phosphatase 4 regulatory subunit 3B	protein-coding
25.1666-2	chr2	59019230	59019651	+	0.133333	NA	intron (NR_033873, intron 8 of 13)	intron (NR_033873, intron 8 of 13)	-198268	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
56.1999	chr2	34763330	34763948	+	0.133333	NA	Intergenic	Intergenic	86082	NR_126404	104355288	Hs.624529	NR_126404	ENSG00000228262	LINC01320	-	long intergenic non-protein coding RNA 1320	ncRNA
32.6-2	chr14	33791246	33791677	+	0.133333	NA	intron (NM_001165893, intron 8 of 10)	intron (NM_001165893, intron 8 of 10)	82524	NR_132771	106635522		NR_132771		SNORA89	-	small nucleolar RNA, H/ACA box 89	snoRNA
22.6-13	chr3	17634924	17635478	+	0.133333	NA	intron (NM_001349090, intron 1 of 21)	L2|LINE|L2	64819	NM_001134381	9779	Hs.475629	NM_014744	ENSG00000131374	TBC1D5	-	TBC1 domain family member 5	protein-coding
31.0667-4	chr15	24953028	24953433	+	0.133333	NA	intron (NM_001349456, intron 4 of 12)	MIR|SINE|MIR	-1663	NM_003097	6638	Hs.564847	NM_003097	ENSG00000128739	SNRPN	HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N	small nuclear ribonucleoprotein polypeptide N	protein-coding
27.6667-14	chr7	8185326	8185733	+	0.133333	NA	intron (NM_001350836, intron 7 of 14)	MER5A|DNA|hAT-Charlie	76523	NM_001350825	3382	Hs.487561	NM_004968	ENSG00000003147	ICA1	ICA69|ICAp69	islet cell autoantigen 1	protein-coding
14.1-7	chr8	127363725	127363924	+	0.133333	NA	intron (NR_117099, intron 3 of 3)	(TAT)n|Simple_repeat|Simple_repeat	-36575	NR_109834	101805488	Hs.745578	NR_109834	ENSG00000280997	CCAT2	LINC00873|NCCP1	colon cancer associated transcript 2	ncRNA
28.6666-2	chr10	56359192	56359478	+	0.133333	NA	intron (NM_001005413, intron 5 of 8)	MIR|SINE|MIR	1924	NM_007057	11130	Hs.591363	NM_007057	ENSG00000122952	ZWINT	HZwint-1|KNTC2AP|SIP30|ZWINT1	ZW10 interacting kinetochore protein	protein-coding
47.6999	chr18	864421	864895	+	0.133333	NA	Intergenic	Intergenic	-40213	NM_001099733	116	Hs.531719	NM_001117	ENSG00000141433	ADCYAP1	PACAP	adenylate cyclase activating polypeptide 1	protein-coding
27.2666-2	chr11	102522894	102523330	+	0.133333	NA	intron (NM_002423, intron 5 of 5)	intron (NM_002423, intron 5 of 5)	7635	NM_002423	4316	Hs.2256	NM_002423	ENSG00000137673	MMP7	MMP-7|MPSL1|PUMP-1	matrix metallopeptidase 7	protein-coding
33.4333-4	chr2	13494167	13494572	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-487356	NR_038434	100506474	Hs.242196	NR_038434	ENSG00000225649	LOC100506474	-	uncharacterized LOC100506474	ncRNA
42.9666	chr1	62903292	62903865	+	0.133333	NA	Intergenic	Intergenic	107347	NR_146607	105378769	Hs.435002	NR_146605	ENSG00000229537	LINC01739	-	long intergenic non-protein coding RNA 1739	ncRNA
26.9333-2	chr1	191646864	191647358	+	0.133333	NA	Intergenic	Intergenic	-418613	NR_146892	105371660	Hs.127094	NR_146892	ENSG00000233882	LINC01680	-	long intergenic non-protein coding RNA 1680	ncRNA
27.9666-4	chr3	45426809	45427091	+	0.133333	NA	intron (NM_001368263, intron 5 of 20)	intron (NM_001368263, intron 5 of 20)	38374	NM_001368263	23395	Hs.526975	NM_015340	ENSG00000011376	LARS2	HLASA|LEURS|PRLTS4|mtLeuRS	leucyl-tRNA synthetase 2, mitochondrial	protein-coding
46.2-2	chr16	52933004	52933543	+	0.133333	NA	Intergenic	Intergenic	119600	NR_147075	105371267	Hs.147562	NR_136518	ENSG00000277639	LOC105371267	PR-lncRNA-1	p53-regulated lncRNA 1	ncRNA
32.6666-4	chr5	55168033	55168372	+	0.133333	NA	TTS (NR_131337)	TTS (NR_131337)	2420	NR_029960	554213		NR_029960	ENSG00000198983	MIR449A	MIRN449|MIRN449A|hsa-mir-449|mir-449a	microRNA 449a	ncRNA
43.2667-9	chrX	100574644	100575279	+	0.133333	NA	Intergenic	HERVP71A-int|LTR|ERV1	-9975	NM_022144	64102	Hs.132957	NM_022144	ENSG00000000005	TNMD	BRICD4|CHM1L|TEM	tenomodulin	protein-coding
22.7666-6	chr5	133322477	133322917	+	0.133333	NA	intron (NM_015082, intron 4 of 15)	LTR16C|LTR|ERVL	105009	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA
21.2-14	chr2	154492919	154493125	+	0.133333	NA	Intergenic	Intergenic	-35584	NR_161181	100144595	Hs.683952	NR_161181		LOC100144595	-	uncharacterized LOC100144595	ncRNA
34.8333-8	chr8	125452140	125452428	+	0.133333	NA	Intergenic	Intergenic	20075	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding
27.2-5	chr12	128381895	128382199	+	0.133333	NA	intron (NM_001136103, intron 1 of 8)	(TTTTTG)n|Simple_repeat|Simple_repeat	87955	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA
28.0999	chr14	84662471	84662953	+	0.133333	NA	Intergenic	L1PB1|LINE|L1	-609220	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
52.1333-3	chr5	7331774	7332430	+	0.133333	NA	Intergenic	Intergenic	15875	NR_134277	101929261	Hs.308202	NR_134277	ENSG00000250668	LINC02123	-	long intergenic non-protein coding RNA 2123	ncRNA
27.3666-2	chr17	30202772	30203149	+	0.133333	NA	intron (NM_001045, intron 14 of 14)	intron (NM_001045, intron 14 of 14)	32737	NM_001045	6532	Hs.29792	NM_001045	ENSG00000108576	SLC6A4	5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT	solute carrier family 6 member 4	protein-coding
35.6-14	chr5	86973887	86974405	+	0.133333	NA	Intergenic	L2b|LINE|L2	140808	NR_036243	100422887		NR_036243	ENSG00000265919	MIR4280	-	microRNA 4280	ncRNA
15.4333-11	chr5	130526290	130526465	+	0.133333	NA	Intergenic	Intergenic	621912	NM_175856	337876	Hs.213137	NM_175856	ENSG00000198108	CHSY3	CHSY2|CSS3	chondroitin sulfate synthase 3	protein-coding
20.8666	chr13	51822244	51822479	+	0.133333	NA	intron (NM_001351003, intron 3 of 4)	intron (NM_001351003, intron 3 of 4)	-18198	NM_001031719	79758	Hs.266728	NM_024705	ENSG00000102796	DHRS12	SDR40C1	dehydrogenase/reductase 12	protein-coding
31.0666	chr3	5911686	5911978	+	0.133333	NA	Intergenic	L1MDa|LINE|L1	-661577	NR_039953	100616334		NR_039953	ENSG00000265180	MIR4790	-	microRNA 4790	ncRNA
26.7333-16	chr8	33245581	33245908	+	0.133333	NA	Intergenic	AluJo|SINE|Alu	227402	NM_032664	84750	Hs.458713	NM_032664	ENSG00000172728	FUT10	FUCTX	fucosyltransferase 10	protein-coding
29-4	chr14	65833246	65833565	+	0.133333	NA	Intergenic	Intergenic	362303	NR_030355	693210		NR_030355	ENSG00000207781	MIR625	MIRN625|hsa-mir-625	microRNA 625	ncRNA
28.6-13	chr2	150892403	150892799	+	0.133333	NA	Intergenic	Intergenic	263704	NR_110247	101929282	Hs.126866	NR_110244	ENSG00000224048	LINC02612	-	long intergenic non-protein coding RNA 2612	ncRNA
22.0333-5	chr2	58707694	58708111	+	0.133333	NA	intron (NR_033873, intron 2 of 13)	intron (NR_033873, intron 2 of 13)	187149	NR_033873	400955	Hs.503210	NR_033873	ENSG00000233723	LINC01122	-	long intergenic non-protein coding RNA 1122	ncRNA
32.8	chr10	24674541	24674921	+	0.133333	NA	intron (NM_001367447, intron 2 of 24)	L1ME1|LINE|L1	48017	NR_160023	57584	Hs.524195	NM_020824	ENSG00000107863	ARHGAP21	ARHGAP10	Rho GTPase activating protein 21	protein-coding
21.3333-5	chr4	80572678	80572977	+	0.133333	NA	intron (NM_152770, intron 2 of 5)	L1MA3|LINE|L1	237107	NM_001206997	255119	Hs.527104	NM_152770	ENSG00000197826	CFAP299	C4orf22	cilia and flagella associated protein 299	protein-coding
34.8666-2	chr22	34673603	34674038	+	0.133333	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	324096	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
45.2666-6	chr6	124386144	124386705	+	0.133333	NA	intron (NM_153355, intron 3 of 5)	HSMAR2|DNA|TcMar-Mariner	103419	NM_001300740	154215	Hs.656604	NM_153355	ENSG00000188580	NKAIN2	FAM77B|NKAIP2|TCBA|TCBA1	sodium/potassium transporting ATPase interacting 2	protein-coding
30.0667	chr1	180309385	180309765	+	0.133333	NA	intron (NM_032360, intron 7 of 7)	intron (NM_032360, intron 7 of 7)	-34894	NR_037642	100527964	Hs.496545	NR_037642	ENSG00000230124	LHX4-AS1	-	LHX4 antisense RNA 1	ncRNA
45.2-4	chr6	170258309	170258978	+	0.133333	NA	intron (NR_002787, intron 1 of 2)	intron (NR_002787, intron 1 of 2)	3926	NR_002787	154449	Hs.447751	NR_002787	ENSG00000230960	LOC154449	-	uncharacterized LOC154449	ncRNA
35.1999-2	chr7	44962823	44963106	+	0.133333	NA	intron (NM_033054, intron 21 of 21)	CpG	16051	NM_033054	64005	Hs.37617	NM_033054	ENSG00000136286	MYO1G	HA2|HLA-HA2|MHAG	myosin IG	protein-coding
18.3333	chr1	45644797	45644954	+	0.133333	NA	TTS (NR_026768)	TTS (NR_026768)	1810	NR_026768	728963	Hs.675157	NR_026768		RPS15AP10	RPS15A_4_42	ribosomal protein S15a pseudogene 10	pseudo
39.9-2	chr3	126184121	126185044	+	0.133333	NA	intron (NR_046383, intron 1 of 1)	intron (NR_046383, intron 1 of 1)	-3396	NM_001270364	10840	Hs.434435	NM_012190	ENSG00000144908	ALDH1L1	10-FTHFDH|10-fTHF|FDH|FTHFD	aldehyde dehydrogenase 1 family member L1	protein-coding
36.0333	chr15	99071994	99072320	+	0.133333	NA	Intergenic	Intergenic	-32923	NM_145728	23336	Hs.207106	NM_015286	ENSG00000182253	SYNM	DMN|SYN	synemin	protein-coding
34.7-4	chr12	27710861	27711169	+	0.133333	NA	intron (NM_021821, intron 1 of 7)	CpG	183	NM_021821	60488	Hs.714076	NM_021821	ENSG00000061794	MRPS35	HDCMD11P|MDS023|MRP-S28|MRPS28	mitochondrial ribosomal protein S35	protein-coding
10.8667-3	chr17	30899387	30899549	+	0.133333	NA	exon (NM_024683, exon 4 of 4)	exon (NM_024683, exon 4 of 4)	6770	NM_024683	79736	Hs.317340	NM_024683	ENSG00000172171	TEFM	C17orf42	transcription elongation factor, mitochondrial	protein-coding
24.6999-2	chr17	64117716	64117988	+	0.133333	NA	intron (NM_001433, intron 1 of 21)	L2a|LINE|L2	12292	NM_001433	2081	Hs.133982	NM_001433	ENSG00000178607	ERN1	IRE1|IRE1P|IRE1a|hIRE1p	endoplasmic reticulum to nucleus signaling 1	protein-coding
41.3999-3	chr5	20411359	20411865	+	0.133333	NA	intron (NM_001349558, intron 1 of 15)	L1MB2|LINE|L1	106061	NR_146519	102725105		NR_146519		CDH18-AS1	-	CDH18 antisense RNA 1	ncRNA
8.86665	chrX	40971141	40971268	+	0.133333	NA	Intergenic	L1M4b|LINE|L1	-114241	NM_001039591	8239	Hs.77578	NM_004652	ENSG00000124486	USP9X	DFFRX|FAF|FAM|MRX99|MRXS99F	ubiquitin specific peptidase 9 X-linked	protein-coding
15.5666-3	chr9	90030366	90030502	+	0.133333	NA	intron (NR_038882, intron 2 of 3)	intron (NR_038882, intron 2 of 3)	-6899	NR_036253	100422963		NR_036253	ENSG00000263967	MIR4290	-	microRNA 4290	ncRNA
25.2-6	chr15	64538077	64538559	+	0.133333	NA	intron (NM_015042, intron 1 of 8)	intron (NM_015042, intron 1 of 8)	38898	NM_015042	23060	Hs.595451	NM_015042	ENSG00000180357	ZNF609	-	zinc finger protein 609	protein-coding
22.6-20	chr6	166907909	166908114	+	0.133333	NA	Intergenic	Intergenic	4313	NR_046644	100861523	Hs.634640	NR_046644		RPS6KA2-AS1	-	RPS6KA2 antisense RNA 1	ncRNA
39.1333-4	chr3	53643773	53644307	+	0.133333	NA	intron (NM_001128840, intron 3 of 47)	MIR3|SINE|MIR	149429	NM_001128840	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding
11.9333-3	chr20	46484811	46484999	+	0.133333	NA	Intergenic	Intergenic	-19613	NR_026640	7686	Hs.717103	NR_026640	ENSG00000225849	MKRN7P	MKRNP3|ZNF127L5|dJ981L23.2	makorin ring finger protein 7, pseudogene	pseudo
19.3666	chr3	66616234	66616582	+	0.133333	NA	Intergenic	L1MA5|LINE|L1	-115987	NM_015541	26018	Hs.518055	NM_015541	ENSG00000144749	LRIG1	LIG-1|LIG1	leucine rich repeats and immunoglobulin like domains 1	protein-coding
40.7333-4	chr16	83971093	83971514	+	0.133333	NA	intron (NM_019065, intron 1 of 12)	MER5B|DNA|hAT-Charlie	2655	NM_001329749	54550	Hs.140950	NM_019065	ENSG00000103154	NECAB2	EFCBP2|stip-2	N-terminal EF-hand calcium binding protein 2	protein-coding
15.4333-5	chr14	52971913	52972189	+	0.133333	NA	Intergenic	L1MA2|LINE|L1	-20954	NM_001134999	10979	Hs.509343	NM_006832	ENSG00000073712	FERMT2	KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2	fermitin family member 2	protein-coding
32.3666-4	chr17	42290841	42291223	+	0.133333	NA	intron (NM_001288719, intron 3 of 17)	MER1A|DNA|hAT-Charlie	2976	NM_001288719	6776	Hs.437058	NM_003152	ENSG00000126561	STAT5A	MGF|STAT5	signal transducer and activator of transcription 5A	protein-coding
26.6-16	chr7	33589972	33590281	+	0.133333	NA	intron (NR_145411, intron 22 of 23)	L2-3_Crp|LINE|L2	-314789	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
46.6333	chr11	6594406	6594907	+	0.133333	NA	TTS (NM_015324)	TTS (NM_015324)	8960	NM_015324	23378	Hs.652255	NM_015324	ENSG00000132275	RRP8	KIAA0409|NML	ribosomal RNA processing 8	protein-coding
55.7999-2	chr4	19942347	19942908	+	0.133333	NA	Intergenic	Intergenic	-309278	NM_004787	9353	Hs.29802	NM_004787	ENSG00000145147	SLIT2	SLIL3|Slit-2	slit guidance ligand 2	protein-coding
18-2	chr1	87875150	87875530	+	0.133333	NA	Intergenic	MLT1A1|LTR|ERVL-MaLR	-503685	NR_038324	100505768	Hs.125247	NR_038324	ENSG00000227290	LINC01364	-	long intergenic non-protein coding RNA 1364	ncRNA
28.6666-3	chr11	112110352	112110773	+	0.133333	NA	Intergenic	L1M2|LINE|L1	23689	NM_001276506	6392	Hs.356270	NM_003002	ENSG00000204370	SDHD	CBT1|CII-4|CWS3|PGL|PGL1|QPs3|SDH4|cybS	succinate dehydrogenase complex subunit D	protein-coding
31.4999-2	chr8	130334353	130334820	+	0.133333	NA	intron (NM_001362925, intron 3 of 29)	intron (NM_001362925, intron 3 of 29)	-38053	NR_002765	29065	Hs.639318	NR_002765		ASAP1-IT1	ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050	ASAP1 intronic transcript 1	ncRNA
15.8333	chr1	117255903	117256077	+	0.133333	NA	Intergenic	Intergenic	-39476	NR_126408	104355292	Hs.576446	NR_126408	ENSG00000235202	LINC01525	lnc-MAN1A2-1	long intergenic non-protein coding RNA 1525	ncRNA
22.5333-12	chr22	39561248	39561523	+	0.133333	NA	Intergenic	Intergenic	-9368	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding
20.9333-3	chr11	90254301	90254567	+	0.133333	NA	intron (NR_104190, intron 1 of 6)	L1M3e|LINE|L1	3202	NR_104190	101929222	Hs.616763	NR_104190	ENSG00000261645	DISC1FP1	Boymaw	DISC1 fusion partner 1	ncRNA
20.6-10	chr5	147371703	147371938	+	0.133333	NA	intron (NM_001112724, intron 9 of 12)	intron (NM_001112724, intron 9 of 12)	81872	NM_001387	1809	Hs.519659	NM_001387	ENSG00000113657	DPYSL3	CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1	dihydropyrimidinase like 3	protein-coding
27.6666-2	chr14	103155723	103156069	+	0.133333	NA	Intergenic	Intergenic	29590	NM_006291	7127	Hs.525607	NM_006291	ENSG00000185215	TNFAIP2	B94|EXOC3L3	TNF alpha induced protein 2	protein-coding
33.0999	chr6	112615042	112615445	+	0.133333	NA	Intergenic	Intergenic	267913	NM_001013734	442247	Hs.448264	NM_001013734	ENSG00000251258	RFPL4B	RNF211	ret finger protein like 4B	protein-coding
38.9999-3	chr7	56008092	56008673	+	0.133333	NA	Intergenic	AluSz6|SINE|Alu	43062	NM_001370507	5723	Hs.512656	NM_004577	ENSG00000146733	PSPH	PSP|PSPHD	phosphoserine phosphatase	protein-coding
49.5999	chr3	64147815	64148531	+	0.133333	NA	intron (NM_001370528, intron 6 of 7)	MIR|SINE|MIR	-39371	NR_046702	100874243	Hs.670840	NR_046702	ENSG00000226017	PRICKLE2-AS3	-	PRICKLE2 antisense RNA 3	ncRNA
34-4	chr3	54701773	54702148	+	0.133333	NA	intron (NM_018398, intron 11 of 37)	L1PA15|LINE|L1	-62103	NR_027122	790952	Hs.720658	NR_027122	ENSG00000265992	ESRG	HESRG	embryonic stem cell related	ncRNA
14.6-8	chr20	37257825	37257970	+	0.133333	NA	promoter-TSS (NM_001184731)	promoter-TSS (NM_001184731)	-989	NM_001184731	2691	Hs.37023	NM_021081	ENSG00000118702	GHRH	GHRF|GRF|INN	growth hormone releasing hormone	protein-coding
22.9666-2	chr11	128969281	128969624	+	0.133333	NA	exon (NM_014715, exon 13 of 13)	exon (NM_014715, exon 13 of 13)	-26053	NM_022112	63970	Hs.160953	NM_022112	ENSG00000120471	TP53AIP1	P53AIP1	tumor protein p53 regulated apoptosis inducing protein 1	protein-coding
43.2666-6	chr6	133115377	133115977	+	0.133333	NA	Intergenic	L1ME4b|LINE|L1	27597	NR_026969	285735	Hs.407549	NM_001037231		LINC00326	NCRNA00326	long intergenic non-protein coding RNA 326	ncRNA
24.2-9	chr6	1342327	1342776	+	0.133333	NA	Intergenic	L1MCa|LINE|L1	30453	NM_033260	94234	Hs.591352	NM_033260	ENSG00000164379	FOXQ1	HFH1	forkhead box Q1	protein-coding
37.0333-2	chr6	167738454	167739001	+	0.133333	NA	Intergenic	Intergenic	-54940	NR_117092	441178	Hs.628956	NM_001025489	ENSG00000203688	LINC02487	-	long intergenic non-protein coding RNA 2487	ncRNA
22.2-10	chr20	58548455	58548775	+	0.133333	NA	intron (NR_034147, intron 6 of 6)	intron (NR_034147, intron 6 of 6)	-33216	NM_001304787	164284	Hs.119286	NM_153360	ENSG00000198768	APCDD1L	-	APC down-regulated 1 like	protein-coding
16.6667-10	chr4	61203885	61204089	+	0.133333	NA	intron (NM_001371342, intron 1 of 20)	intron (NM_001371342, intron 1 of 20)	1815	NM_001371342								
22.2-12	chr4	22976557	22976786	+	0.133333	NA	Intergenic	L1MA4A|LINE|L1	262582	NM_001277225	57733	Hs.653107	NM_020973	ENSG00000249948	GBA3	CBG|CBGL1|GLUC|KLRP	glucosylceramidase beta 3 (gene/pseudogene)	protein-coding
21.3666-3	chr8	31209848	31210073	+	0.133333	NA	Intergenic	LTR16A|LTR|ERVL	-176604	NM_001015508	29942	Hs.373778	NM_013357	ENSG00000172733	PURG	PURG-A|PURG-B|PURGA|PURGB	purine rich element binding protein G	protein-coding
37.1333-7	chr5	28749363	28749786	+	0.133333	NA	Intergenic	Intergenic	-177296	NR_033961	729862	Hs.646006	NR_033961		LSP1P3	-	LSP1 pseudogene 3	pseudo
28.8-10	chr3	94944852	94945129	+	0.133333	NA	intron (NR_015400, intron 1 of 7)	L1PA8A|LINE|L1	6727	NR_015400	255025	Hs.130994	NR_015400	ENSG00000239589	LINC00879	-	long intergenic non-protein coding RNA 879	ncRNA
30.0666-3	chr8	43788571	43789139	+	0.133333	NA	Intergenic	ALR/Alpha|Satellite|centr	496413	NM_001005365	340441	Hs.531579	NM_001002920	ENSG00000188877	POTEA	A26A1|CT104.3|POTE-8|POTE8	POTE ankyrin domain family member A	protein-coding
31.9333-3	chr14	40624055	40624385	+	0.133333	NA	Intergenic	Intergenic	-330491	NR_109757	644919	Hs.434414	NR_109757		LINC02315	-	long intergenic non-protein coding RNA 2315	ncRNA
32.9999-3	chr8	120512324	120512650	+	0.133333	NA	intron (NM_022045, intron 17 of 21)	intron (NM_022045, intron 17 of 21)	67068	NM_022045	27085	Hs.657656	NM_022045	ENSG00000172167	MTBP	MDM2BP	MDM2 binding protein	protein-coding
11.6333-3	chr5	15178841	15178961	+	0.133333	NA	Intergenic	L1M1|LINE|L1	87659	NR_109944	101929454	Hs.453273	NR_109944		LINC02149	-	long intergenic non-protein coding RNA 2149	ncRNA
29.1333-3	chr15	63244644	63245005	+	0.133333	NA	intron (NM_016530, intron 2 of 7)	intron (NM_016530, intron 2 of 7)	-32726	NM_001145646	83464	Hs.511703	NM_031301	ENSG00000138613	APH1B	APH-1B|PRO1328|PSFL|TAAV688	aph-1 homolog B, gamma-secretase subunit	protein-coding
25.1-5	chr2	12467405	12467720	+	0.133333	NA	intron (NR_110196, intron 4 of 5)	FLAM_C|SINE|Alu	-249310	NM_021643	28951	Hs.467751	NM_021643	ENSG00000071575	TRIB2	C5FW|GS3955|TRB2	tribbles pseudokinase 2	protein-coding
24-17	chr6	97271839	97272265	+	0.133333	NA	intron (NM_001350600, intron 5 of 23)	intron (NM_001350600, intron 5 of 23)	11164	NM_198468	253714	Hs.444292	NM_198468	ENSG00000146263	MMS22L	C6orf167|dJ39B17.2	MMS22 like, DNA repair protein	protein-coding
40.0666	chr10	7391736	7392108	+	0.133333	NA	intron (NM_001029880, intron 1 of 20)	L1ME4a|LINE|L1	17419	NM_001018039	57713	Hs.407983	NM_001018039	ENSG00000198879	SFMBT2	-	Scm like with four mbt domains 2	protein-coding
35.7999	chr12	2586748	2587107	+	0.133333	NA	intron (NM_199460, intron 18 of 49).2	intron (NM_199460, intron 18 of 49).2	85293	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA
28.3999	chr11	32010807	32011073	+	0.133333	NA	Intergenic	THE1B|LTR|ERVL-MaLR	30378	NR_120527	100506675	Hs.446169	NR_120526	ENSG00000254584	LOC100506675	-	uncharacterized LOC100506675	ncRNA
33.4666-4	chr13	22867375	22867731	+	0.133333	NA	Intergenic	L1MEg|LINE|L1	30628	NR_033774	646201	Hs.729338	NR_033774		BASP1P1	-	BASP1 pseudogene 1	pseudo
12.0667-2	chr12	30813657	30813832	+	0.133333	NA	Intergenic	L1P3|LINE|L1	18063	NR_040245	100287314	Hs.355210	NR_040245		LINC00941	lncRNA-MUF	long intergenic non-protein coding RNA 941	ncRNA
35.8667-8	chr8	110869809	110870310	+	0.133333	NA	Intergenic	Intergenic	157374	NR_125417	101927459	Hs.575543	NR_125416	ENSG00000253877	LINC01608	-	long intergenic non-protein coding RNA 1608	ncRNA
16.9666	chr8	119211024	119211244	+	0.133333	NA	intron (NM_052886, intron 1 of 3)	intron (NM_052886, intron 1 of 3)	2771	NM_052886	114569	Hs.201083	NM_052886	ENSG00000147676	MAL2	-	mal, T cell differentiation protein 2 (gene/pseudogene)	protein-coding
34.1333-5	chr20	31341696	31342023	+	0.133333	NA	Intergenic	Intergenic	-26742	NM_054112	117285	Hs.274124	NM_054112	ENSG00000131068	DEFB118	C20orf63|DEFB-18|ESC42|ESP13.6	defensin beta 118	protein-coding
22.4-14	chr2	236188045	236188227	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	-19750	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding
43.1	chr2	73297111	73297494	+	0.133333	NA	Intergenic	Intergenic	-3754	NM_001965	1961	Hs.3052	NM_001965	ENSG00000135625	EGR4	AT133|NGFI-C|NGFIC|PAT133	early growth response 4	protein-coding
44.4666-2	chr12	38911081	38911667	+	0.133333	NA	Intergenic	Intergenic	-5783	NM_153634	144402	Hs.40910	NM_153634	ENSG00000139117	CPNE8	-	copine 8	protein-coding
43.1666	chr11	66802269	66802897	+	0.133333	NA	intron (NM_024650, intron 8 of 16)	AluJr|SINE|Alu	-40858	NM_001032279	9986	Hs.654972	NM_005133	ENSG00000173653	RCE1	FACE2|RCE1A|RCE1B	Ras converting CAAX endopeptidase 1	protein-coding
31.1333-10	chr5	117194138	117194679	+	0.133333	NA	Intergenic	Intergenic	-221104	NR_046089	728342	Hs.434420	NR_046089		LINC00992	-	long intergenic non-protein coding RNA 992	ncRNA
29.9333-7	chr2	78940011	78940364	+	0.133333	NA	Intergenic	Intergenic	-85515	NM_001270040	130120	Hs.447084	NM_198448	ENSG00000143954	REG3G	LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429	regenerating family member 3 gamma	protein-coding
26.2-3	chr11	109668878	109669198	+	0.133333	NA	Intergenic	LTR8|LTR|ERV1	246848	NM_207645	399947	Hs.172982	NM_207645	ENSG00000185742	C11orf87	LOH11CR1A|NEURIM1	chromosome 11 open reading frame 87	protein-coding
29.6333-8	chr9	132152096	132152447	+	0.133333	NA	Intergenic	Intergenic	-9787	NM_032536	84628	Hs.163642	NM_032536	ENSG00000196358	NTNG2	LHLL9381|Lmnt2|NTNG1|bA479K20.1	netrin G2	protein-coding
23.6-26	chrX	10799015	10799340	+	0.133333	NA	intron (NM_033290, intron 1 of 9)	intron (NM_033290, intron 1 of 9)	34506	NM_033290	4281	Hs.27695	NM_000381	ENSG00000101871	MID1	BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY	midline 1	protein-coding
24.4333-10	chrX	63687045	63687258	+	0.133333	NA	intron (NM_001353922, intron 4 of 8)	L1MA4|LINE|L1	-15649	NR_138419	100874355	Hs.671524	NR_138419	ENSG00000231729	ARHGEF9-IT1	-	ARHGEF9 intronic transcript 1	ncRNA
23.5333-6	chr2	48112936	48113138	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-201645	NM_002158	3344	Hs.468478	NM_002158	ENSG00000170802	FOXN2	HTLF	forkhead box N2	protein-coding
19.6-17	chr7	7607824	7608246	+	0.133333	NA	non-coding (NR_163250, exon 12 of 12)	non-coding (NR_163250, exon 12 of 12)	-32717	NM_001302350	729852	Hs.652371	NM_001302348	ENSG00000219545	UMAD1	RPA3-AS1|RPA3OS	UBAP1-MVB12-associated (UMA) domain containing 1	protein-coding
29.8333-2	chr2	119041584	119042157	+	0.133333	NA	Intergenic	Intergenic	99701	NM_006770	8685	Hs.67726	NM_006770	ENSG00000019169	MARCO	SCARA2|SR-A6	macrophage receptor with collagenous structure	protein-coding
22.6333-2	chr10	11693325	11693742	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-48849	NM_024693	79746	Hs.22242	NM_024693	ENSG00000134463	ECHDC3	-	enoyl-CoA hydratase domain containing 3	protein-coding
29.0333	chr1	38393736	38393986	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	-81335	NR_146761	105378656	Hs.128924	NR_146761	ENSG00000238063	LINC01685	-	long intergenic non-protein coding RNA 1685	ncRNA
40.5999-2	chr9	19622436	19622863	+	0.133333	NA	intron (NM_020344, intron 1 of 9)	L1ME3G|LINE|L1	164370	NM_001193288	25769	Hs.283014	NM_020344	ENSG00000155886	SLC24A2	NCKX2	solute carrier family 24 member 2	protein-coding
46.5332-2	chr5	121152569	121152953	+	0.133333	NA	Intergenic	L1PA16|LINE|L1	-169789	NR_104999	102467226		NR_104999		LOC102467226	-	uncharacterized LOC102467226	ncRNA
14.3333	chr11	31287379	31287504	+	0.133333	NA	intron (NM_181807, intron 7 of 8)	HAL1|LINE|L1	82298	NM_181807	341019	Hs.127405	NM_020869	ENSG00000170959	DCDC1	DCDC5	doublecortin domain containing 1	protein-coding
30.1666	chr2	75251254	75251624	+	0.133333	NA	Intergenic	Intergenic	-51919	NM_001058	6869	Hs.633301	NM_001058	ENSG00000115353	TACR1	NK1R|NKIR|SPR|TAC1R	tachykinin receptor 1	protein-coding
49.5333	chr2	59055826	59056462	+	0.133333	NA	intron (NR_033873, intron 12 of 13)	MLT1B|LTR|ERVL-MaLR	-161564	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
16.9333-4	chr11	108032590	108032717	+	0.133333	NA	intron (NM_003478, intron 1 of 18)	L1M5|LINE|L1	23755	NM_003478	8065	Hs.440320	NM_003478	ENSG00000166266	CUL5	CUL-5|VACM-1|VACM1	cullin 5	protein-coding
43.8666-3	chr2	80498444	80499085	+	0.133333	NA	intron (NM_001282599, intron 3 of 11)	intron (NM_001282599, intron 3 of 11)	185385	NM_001282599	1496	Hs.167368	NM_004389	ENSG00000066032	CTNNA2	CAP-R|CAPR|CDCBM9|CT114|CTNR	catenin alpha 2	protein-coding
22.8333-8	chr8	130591565	130591781	+	0.133333	NA	Intergenic	Intergenic	-147999	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	protein-coding
28.7333-8	chr2	83531529	83532124	+	0.133333	NA	Intergenic	Intergenic	9012	NR_146482	101928031	Hs.547548	NR_146482	ENSG00000232548	LINC01809	-	long intergenic non-protein coding RNA 1809	ncRNA
30.8666-2	chr4	89732696	89732993	+	0.133333	NA	intron (NM_001146054, intron 4 of 5)	MER44A|DNA|TcMar-Tigger	-103557	NR_045481	644248	Hs.553954	NR_045481	ENSG00000247775	SNCA-AS1	-	SNCA antisense RNA 1	ncRNA
51.8999	chr13	58012305	58012893	+	0.133333	NA	Intergenic	Intergenic	-153228	NR_120416	101926897	Hs.640215	NR_120416	ENSG00000277448	LINC02338	-	long intergenic non-protein coding RNA 2338	ncRNA
20.1333-11	chr2	123165937	123166157	+	0.133333	NA	Intergenic	ERVL-E-int|LTR|ERVL	-92566	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
31.3333-13	chr9	36049966	36050433	+	0.133333	NA	intron (NM_021111, intron 1 of 20)	L2a|LINE|L2	13286	NM_001316347	8434	Hs.388918	NM_021111	ENSG00000122707	RECK	ST15	reversion inducing cysteine rich protein with kazal motifs	protein-coding
23.3666-4	chr8	24348400	24348867	+	0.133333	NA	intron (NR_130710, intron 18 of 22)	intron (NR_130710, intron 18 of 22)	-35652	NM_001145272	27299	Hs.521459	NM_014479	ENSG00000134028	ADAMDEC1	M12.219	ADAM like decysin 1	protein-coding
40.3999	chr4	174327722	174328053	+	0.133333	NA	intron (NM_001145314, intron 10 of 10)	MER5A1|DNA|hAT-Charlie	-43636	NM_012180	26269	Hs.76917	NM_012180	ENSG00000164117	FBXO8	DC10|FBS|FBX8	F-box protein 8	protein-coding
30.7666	chr17	50008852	50009149	+	0.133333	NA	Intergenic	L2a|LINE|L2	-13776	NM_005220	1747	Hs.134194	NM_005220	ENSG00000064195	DLX3	AI4|TDO	distal-less homeobox 3	protein-coding
19.0667-2	chr11	28769072	28769331	+	0.133333	NA	Intergenic	L1M1|LINE|L1	-291653	NR_107035	102466876		NR_107035	ENSG00000273912	MIR8068	hsa-mir-8068	microRNA 8068	ncRNA
18.2333-11	chr5	81928692	81928931	+	0.133333	NA	Intergenic	MER33|DNA|hAT-Charlie	-43212	NM_001131028	83734	Hs.713698	NM_031482	ENSG00000152348	ATG10	APG10|APG10L|pp12616	autophagy related 10	protein-coding
29.4333	chr1	81572813	81573110	+	0.133333	NA	intron (NM_001366008, intron 2 of 26)	intron (NM_001366008, intron 2 of 26)	-15259	NR_125943	101927434	Hs.130394	NR_125943	ENSG00000234953	LOC101927434	-	uncharacterized LOC101927434	ncRNA
21.8666-4	chrX	5314651	5315009	+	0.133333	NA	Intergenic	Intergenic	-681258	NR_110390	101928201	Hs.586488	NR_110390	ENSG00000236513	LOC101928201	-	uncharacterized LOC101928201	ncRNA
27.4666-3	chr20	40355623	40355950	+	0.133333	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	333450	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding
15.7	chr1	1188267	1188407	+	0.133333	NA	intron (NM_001130045, intron 13 of 15)	L1MB8|LINE|L1	8656	NM_153254	254173	Hs.454835	NM_153254	ENSG00000162571	TTLL10	TTLL5	tubulin tyrosine ligase like 10	protein-coding
32.6999	chr14	51265113	51265505	+	0.133333	NA	Intergenic	Intergenic	25062	NM_030755	81542	Hs.125221	NM_030755	ENSG00000139921	TMX1	PDIA11|TMX|TXNDC|TXNDC1	thioredoxin related transmembrane protein 1	protein-coding
37.2666-2	chr14	77885277	77885592	+	0.133333	NA	intron (NM_001366489, intron 4 of 9)	intron (NM_001366489, intron 4 of 9)	85325	NM_001366485	57143	Hs.413208	NM_020421	ENSG00000063761	ADCK1	-	aarF domain containing kinase 1	protein-coding
20.6666-10	chr8	144243710	144243914	+	0.133333	NA	intron (NM_001288814, intron 23 of 41)	intron (NM_001288814, intron 23 of 41)	18925	NR_107057	102465906		NR_107057	ENSG00000284054	MIR7112	MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2	microRNA 7112	ncRNA
20.1667-13	chr5	4564376	4564566	+	0.133333	NA	Intergenic	L1M1|LINE|L1	-209010	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA
32.4-11	chr5	6301028	6301493	+	0.133333	NA	Intergenic	L1ME3B|LINE|L1	36032	NR_028351	401172	Hs.376760	NM_001001702	ENSG00000250490	LINC02145	-	long intergenic non-protein coding RNA 2145	ncRNA
24.3999	chr8	18574035	18574325	+	0.133333	NA	intron (NM_015310, intron 13 of 15)	intron (NM_015310, intron 13 of 15)	182898	NM_000015	10	Hs.2	NM_000015	ENSG00000156006	NAT2	AAC2|NAT-2|PNAT	N-acetyltransferase 2	protein-coding
19.1	chr1	29600531	29600795	+	0.133333	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-250549	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA
15.8-3	chr13	38176831	38177009	+	0.133333	NA	Intergenic	MLT2B3|LTR|ERVL	-33688	NR_047500	100874188	Hs.569249	NR_047500	ENSG00000223685	LINC00571	-	long intergenic non-protein coding RNA 571	ncRNA
28.1666-7	chr8	76526845	76527230	+	0.133333	NA	Intergenic	Intergenic	120383	NR_105006	101926978	Hs.615028	NR_105006	ENSG00000254300	LINC01111	-	long intergenic non-protein coding RNA 1111	ncRNA
56.2332	chr5	34773742	34774402	+	0.133333	NA	intron (NM_015577, intron 3 of 17)	L1M1|LINE|L1	-65092	NM_144725	153657	Hs.435742	NM_144725	ENSG00000205838	TTC23L	MC25-1	tetratricopeptide repeat domain 23 like	protein-coding
17.7333-6	chr14	36111235	36111574	+	0.133333	NA	intron (NR_073454, intron 1 of 2)	intron (NR_073454, intron 1 of 2)	40977	NR_073454	101101773	Hs.640678	NR_073454	ENSG00000257585	LINC00609	-	long intergenic non-protein coding RNA 609	ncRNA
15.8-13	chr6	144581977	144582210	+	0.133333	NA	intron (NM_007124, intron 50 of 73)	intron (NM_007124, intron 50 of 73)	176438	NR_132778	106635530		NR_132778		SNORA98	-	small nucleolar RNA, H/ACA box 98	snoRNA
30.6333-2	chr11	76307902	76308245	+	0.133333	NA	Intergenic	MIR|SINE|MIR	72892	NR_130898	5612	Hs.503315	NM_004705	ENSG00000137492	THAP12	DAP4|P52rIPK|PRKRIR|THAP0	THAP domain containing 12	protein-coding
14.8333-12	chr6	65423253	65423452	+	0.133333	NA	intron (NM_198283, intron 4 of 9)	intron (NM_198283, intron 4 of 9)	121934	NM_001271675	441155	Hs.546686	NM_001271675		LOC441155	-	zinc finger CCCH-type domain-containing-like	protein-coding
19.8667-12	chr5	101145138	101145376	+	0.133333	NA	Intergenic	Intergenic	-241975	NM_175052	7903	Hs.308628	NM_005668	ENSG00000113532	ST8SIA4	PST|PST1|SIAT8D|ST8SIA-IV	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	protein-coding
21.1333-15	chr9	22161194	22161537	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-152052	NM_078487	1030	Hs.72901	NM_004936	ENSG00000147883	CDKN2B	CDK4I|INK4B|MTS2|P15|TP15|p15INK4b	cyclin dependent kinase inhibitor 2B	protein-coding
12.6667-9	chr8	59231609	59231749	+	0.133333	NA	Intergenic	Intergenic	112469	NR_149031	100505501		NR_149030		LOC100505501	-	uncharacterized LOC100505501	ncRNA
22.5333-3	chr10	51410945	51411411	+	0.133333	NA	intron (NM_001098512, intron 2 of 17)	AluSz|SINE|Alu	111605	NR_030336	693190		NR_030336	ENSG00000207813	MIR605	MIRN605|hsa-mir-605|mir-605	microRNA 605	ncRNA
19.9333-7	chr16	67443884	67444106	+	0.133333	NA	intron (NM_004691, intron 3 of 7)	intron (NM_004691, intron 3 of 7)	12874	NM_000196	3291	Hs.1376	NM_000196	ENSG00000176387	HSD11B2	AME|AME1|HSD11K|HSD2|SDR9C3	hydroxysteroid 11-beta dehydrogenase 2	protein-coding
43.2666-4	chr3	108511530	108512024	+	0.133333	NA	intron (NM_014981, intron 1 of 41)	intron (NM_014981, intron 1 of 41)	17545	NM_014981	22989	Hs.731060	NM_014981	ENSG00000144821	MYH15	-	myosin heavy chain 15	protein-coding
31.2666-9	chr9	127723975	127724299	+	0.133333	NA	exon (NM_001317037, exon 8 of 14)	exon (NM_001317037, exon 8 of 14)	8058	NM_144965	158248	Hs.642748	NM_144965	ENSG00000167094	TTC16	-	tetratricopeptide repeat domain 16	protein-coding
38.7666-2	chr9	136565558	136565888	+	0.133333	NA	Intergenic	Intergenic	17881	NR_121577	101928483	Hs.170035	NR_121577		NALT1	LINC01573|MIR4674HG|NALT|TCONS_l2_00029132	NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1	ncRNA
22.8666-7	chr20	15254544	15255045	+	0.133333	NA	intron (NM_001351663, intron 6 of 17)	MIRb|SINE|MIR	57954	NM_001351664	140733	Hs.661576	NM_080676	ENSG00000172264	MACROD2	C20orf133|C2orf133	mono-ADP ribosylhydrolase 2	protein-coding
17.8-3	chr11	39460585	39460739	+	0.133333	NA	Intergenic	Intergenic	811804	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
27.9333-4	chr14	50141452	50141825	+	0.133333	NA	intron (NM_006939, intron 16 of 22)	L1M5|LINE|L1	-25066	NM_001040662	79609	Hs.558541	NM_024558	ENSG00000100483	VCPKMT	C14orf138|METTL21D|VCP-KMT	valosin containing protein lysine methyltransferase	protein-coding
49.7666	chr1	84202169	84202786	+	0.133333	NA	intron (NM_001300915, intron 10 of 11)	L3b|LINE|CR1	20845	NM_001242862	5567	Hs.487325	NM_002731	ENSG00000142875	PRKACB	PKA C-beta|PKACB	protein kinase cAMP-activated catalytic subunit beta	protein-coding
31.2666-6	chr4	25861144	25861601	+	0.133333	NA	intron (NM_001297592, intron 1 of 23)	intron (NM_001297592, intron 1 of 23)	1616	NM_015187	23231	Hs.479384	NM_015187	ENSG00000091490	SEL1L3	Sel-1L3	SEL1L family member 3	protein-coding
19.8-15	chr3	134873405	134873680	+	0.133333	NA	intron (NM_004441, intron 1 of 15)	intron (NM_004441, intron 1 of 15)	78282	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding
24.6999	chr10	20058539	20058725	+	0.133333	NA	intron (NM_032812, intron 3 of 13)	intron (NM_032812, intron 3 of 13)	242200	NM_032812	84898	Hs.99472	NM_032812	ENSG00000120594	PLXDC2	TEM7R	plexin domain containing 2	protein-coding
16.9-7	chr5	165892273	165892506	+	0.133333	NA	Intergenic	Intergenic	1033981	NR_108020	102557615		NR_108020	ENSG00000254130	LINC01947	CTB-7E3.1	long intergenic non-protein coding RNA 1947	ncRNA
46.9333-6	chr8	141719332	141719989	+	0.133333	NA	Intergenic	Intergenic	66653	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA
25.8999	chr20	62584275	62584649	+	0.133333	NA	Intergenic	Intergenic	19550	NR_029676	406923		NR_029676	ENSG00000284508	MIR133A2	MIRN133A2|mir-133a-2	microRNA 133a-2	ncRNA
10.7-8	chr8	88806146	88806226	+	0.133333	NA	Intergenic	L2a|LINE|L2	-478703	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
28.1666	chr1	190081883	190082184	+	0.133333	NA	Intergenic	MER77B|LTR|ERVL	393977	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
21.2333-4	chr11	83593490	83593844	+	0.133333	NA	intron (NM_001142699, intron 19 of 27)	(A)n|Simple_repeat|Simple_repeat	88758	NM_001142702	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
42.2667-3	chr17	53634504	53635086	+	0.133333	NA	Intergenic	L1M4|LINE|L1	-188132	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
35.9666-4	chr7	33107298	33107776	+	0.133333	NA	intron (NM_203288, intron 1 of 5)	intron (NM_203288, intron 1 of 5)	1867	NM_203288	6100	Hs.326805	NM_203288	ENSG00000164610	RP9	PAP-1|PAP1	RP9 pre-mRNA splicing factor	protein-coding
27.2666	chr10	110284261	110284670	+	0.133333	NA	intron (NM_001008541, intron 4 of 4)	intron (NM_001008541, intron 4 of 4)	20455	NM_005871	10285	Hs.632093	NM_005871	ENSG00000119953	SMNDC1	SMNR|SPF30|TDRD16C	survival motor neuron domain containing 1	protein-coding
17.7-12	chr4	88355248	88355385	+	0.133333	NA	Intergenic	LTR49-int|LTR|ERV1	-23423	NM_001165136	55008	Hs.529317	NM_017912	ENSG00000138642	HERC6	-	HECT and RLD domain containing E3 ubiquitin protein ligase family member 6	protein-coding
34.1999	chr3	61545537	61545957	+	0.133333	NA	Intergenic	Intergenic	-15824	NM_002841	5793	Hs.595541	NM_002841	ENSG00000144724	PTPRG	HPTPG|PTPG|R-PTP-GAMMA|RPTPG	protein tyrosine phosphatase receptor type G	protein-coding
15.3-14	chr9	134550922	134551143	+	0.133333	NA	Intergenic	MER117|DNA|hAT-Charlie	-90773	NM_001278074	1289	Hs.210283	NM_000093	ENSG00000130635	COL5A1	EDSC|EDSCL1	collagen type V alpha 1 chain	protein-coding
10.9333-10	chr3	186451222	186451363	+	0.133333	NA	Intergenic	MER92-int|LTR|ERV1	10947	NR_151710	107986164	Hs.131227	NR_151708	ENSG00000234548	LINC02020	-	long intergenic non-protein coding RNA 2020	ncRNA
15.9666-2	chr2	88841814	88841983	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	29528	NR_039635	100616399		NR_039635	ENSG00000265510	MIR4436A	mir-4436a	microRNA 4436a	ncRNA
40.8	chr10	37495970	37496495	+	0.133333	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	106699	NM_001190489	100288485	Hs.727092	NM_001190489	ENSG00000256892	MTRNR2L7	HN7	MT-RNR2 like 7	protein-coding
17.4667-11	chr5	19525300	19525490	+	0.133333	NA	intron (NM_001349559, intron 9 of 12)	intron (NM_001349559, intron 9 of 12)	360877	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
18.3333-8	chr19	31613939	31614152	+	0.133333	NA	Intergenic	Intergenic	21764	NM_001205273	100507527	Hs.432564	NM_001205273		THEG5	-	testis highly expressed protein 5	protein-coding
25.2-3	chr12	12357858	12358343	+	0.133333	NA	intron (NM_001330356, intron 1 of 2)	intron (NM_001330356, intron 1 of 2)	1022	NM_001300742	118426	Hs.504805	NM_058169	ENSG00000165714	BORCS5	LOH12CR1|LOH1CR12	BLOC-1 related complex subunit 5	protein-coding
44.9-4	chr5	10367610	10368009	+	0.133333	NA	intron (NM_001270661, intron 1 of 22)	intron (NM_001270661, intron 1 of 22)	14114	NM_005885	10299	Hs.432862	NM_005885	ENSG00000145495	MARCH6	DOA10|MARCH-VI|RNF176|TEB4	membrane associated ring-CH-type finger 6	protein-coding
39.4-10	chr9	74470417	74470864	+	0.133333	NA	Intergenic	Intergenic	-26695	NM_006914	6096	Hs.494178	NM_006914	ENSG00000198963	RORB	EIG15|NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1	RAR related orphan receptor B	protein-coding
41.0332	chr7	80999673	81000192	+	0.133333	NA	Intergenic	Intergenic	-77543	NM_001350120	10512	Hs.269109	NM_006379	ENSG00000075223	SEMA3C	SEMAE|SemE	semaphorin 3C	protein-coding
31.5333-3	chr15	42192411	42192761	+	0.133333	NA	intron (NM_001301138, intron 2 of 25)	intron (NM_001301138, intron 2 of 25)	7080	NR_030357	693212		NR_030357	ENSG00000207712	MIR627	MIRN627|hsa-mir-627|mir-627	microRNA 627	ncRNA
41.7333-5	chr4	104026581	104027057	+	0.133333	NA	Intergenic	MLT1I|LTR|ERVL-MaLR	-306834	NM_001059	6870	Hs.942	NM_001059	ENSG00000169836	TACR3	HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL	tachykinin receptor 3	protein-coding
33.5666-3	chr2	185047803	185048121	+	0.133333	NA	Intergenic	L1M4b|LINE|L1	119110	NR_136319	105373782	Hs.128285	NR_136319		LOC105373782	-	uncharacterized LOC105373782	ncRNA
24.7333	chr10	23754865	23755182	+	0.133333	NA	intron (NM_001098500, intron 1 of 18)	intron (NM_001098500, intron 1 of 18)	60296	NM_001098500	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	ETL4|SKT	KIAA1217	protein-coding
25.5666-6	chr3	81298547	81299058	+	0.133333	NA	Intergenic	L2b|LINE|L2	304934	NR_132411	728290	Hs.563132	NR_132411	ENSG00000243694	LINC02027	-	long intergenic non-protein coding RNA 2027	ncRNA
31.2-3	chr1	119321863	119322329	+	0.133333	NA	Intergenic	MLT2B4|LTR|ERVL	-6156	NR_146623	105378934		NR_146623	ENSG00000232650	LINC01780	-	long intergenic non-protein coding RNA 1780	ncRNA
30.2666-4	chr5	60372152	60372396	+	0.133333	NA	intron (NM_001364599, intron 1 of 16)	intron (NM_001364599, intron 1 of 16)	389	NM_001364600	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
35.5333-6	chr18	1488058	1488422	+	0.133333	NA	Intergenic	MLT1E2|LTR|ERVL-MaLR	-128611	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
42.5-4	chr9	70376777	70377275	+	0.133333	NA	Intergenic	Intergenic	37631	NM_001206	687	Hs.150557	NM_001206	ENSG00000119138	KLF9	BTEB|BTEB1	Kruppel like factor 9	protein-coding
77.1332	chr14	65619406	65620319	+	0.133333	NA	intron (NM_004480, intron 4 of 9)	intron (NM_004480, intron 4 of 9)	148760	NR_030355	693210		NR_030355	ENSG00000207781	MIR625	MIRN625|hsa-mir-625	microRNA 625	ncRNA
21.5666	chr16	77946503	77946831	+	0.133333	NA	intron (NM_020927, intron 7 of 8)	intron (NM_020927, intron 7 of 8)	-75881	NM_005752	10143	Hs.177936	NM_005752	ENSG00000166509	CLEC3A	CLECSF1	C-type lectin domain family 3 member A	protein-coding
27.5333-7	chr2	114733702	114734140	+	0.133333	NA	intron (NM_001321910, intron 2 of 26)	intron (NM_001321910, intron 2 of 26)	99627	NR_132105	101927591	Hs.553019	NR_132105	ENSG00000231538	DPP10-AS3	-	DPP10 antisense RNA 3	ncRNA
22.8-17	chr7	54910635	54910895	+	0.133333	NA	Intergenic	L1M3c|LINE|L1	-108252	NM_001346941	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding
29.9333-5	chr15	47411662	47412157	+	0.133333	NA	intron (NM_001198999, intron 1 of 19)	intron (NM_001198999, intron 1 of 19)	227820	NM_001198999	80031	Hs.511265	NM_020858	ENSG00000137872	SEMA6D	-	semaphorin 6D	protein-coding
38.3999	chr1	183476153	183476554	+	0.133333	NA	intron (NM_001174061, intron 1 of 21)	intron (NM_001174061, intron 1 of 21)	3854	NM_173156	9887	Hs.591463	NM_014837	ENSG00000116698	SMG7	C1orf16|EST1C|SGA56M	SMG7 nonsense mediated mRNA decay factor	protein-coding
35.9666-5	chr7	54718327	54718680	+	0.133333	NA	Intergenic	Intergenic	40708	NM_014302	23480	Hs.488282	NM_014302	ENSG00000132432	SEC61G	SSS1	SEC61 translocon gamma subunit	protein-coding
24.7-4	chr17	71141406	71141708	+	0.133333	NA	intron (NR_104152, intron 2 of 3)	intron (NR_104152, intron 2 of 3)	60622	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility 17	ncRNA
24.6-13	chr8	70176619	70176887	+	0.133333	NA	intron (NM_001321711, intron 4 of 21)	intron (NM_001321711, intron 4 of 21)	-105501	NM_024504	63978	Hs.736037	NM_024504	ENSG00000147596	PRDM14	PFM11	PR/SET domain 14	protein-coding
26.6333-4	chr2	74314667	74315060	+	0.133333	NA	intron (NM_133478, intron 6 of 30)	intron (NM_133478, intron 6 of 30)	162	NM_021196	57835	Hs.594099	NM_021196	ENSG00000188687	SLC4A5	NBC4|NBCe2	solute carrier family 4 member 5	protein-coding
27.2666-5	chr4	14456656	14457092	+	0.133333	NA	Intergenic	Intergenic	344906	NR_033931	152742	Hs.135435	NR_033931	ENSG00000248698	LINC01085	-	long intergenic non-protein coding RNA 1085	ncRNA
19.6-16	chr5	172607114	172607336	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-34038	NM_001308177	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|RNF67B|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding
31.0999	chr1	30291462	30291872	+	0.133333	NA	Intergenic	L1MC3|LINE|L1	-254055	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA
36.3999-4	chr2	46066582	46066879	+	0.133333	NA	intron (NM_005400, intron 10 of 14)	intron (NM_005400, intron 10 of 14)	-230677	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding
21.4333-8	chr2	225863058	225863267	+	0.133333	NA	Intergenic	L1MC3|LINE|L1	-279632	NR_046102	646736	Hs.712836	NR_046102		LOC646736	-	uncharacterized LOC646736	ncRNA
42.4666	chr3	109365210	109365681	+	0.133333	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	-27873	NM_018189	55211	Hs.317659	NM_018189	ENSG00000121570	DPPA4	2410091M23Rik	developmental pluripotency associated 4	protein-coding
20.7333-16	chr5	33799786	33800085	+	0.133333	NA	intron (NM_001324511, intron 2 of 2)	intron (NM_001324511, intron 2 of 2)	92055	NM_001324511	81792	Hs.12680	NM_030955	ENSG00000151388	ADAMTS12	PRO4389	ADAM metallopeptidase with thrombospondin type 1 motif 12	protein-coding
19.4666	chr1	205655997	205656181	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-23217	NM_001973	2005	Hs.497520	NM_001973	ENSG00000158711	ELK4	SAP1	ETS transcription factor ELK4	protein-coding
31.4333-8	chr8	132456984	132457346	+	0.133333	NA	intron (NM_004519, intron 1 of 14)	MER20B|DNA|hAT-Charlie	-9903	NM_001204824	3786	Hs.374023	NM_004519	ENSG00000184156	KCNQ3	BFNC2|EBN2|KV7.3	potassium voltage-gated channel subfamily Q member 3	protein-coding
23.4-10	chr5	42252586	42252870	+	0.133333	NA	Intergenic	L1MA6|LINE|L1	-77383	NR_104636	101926960	Hs.365692	NR_104635		LOC101926960	-	uncharacterized LOC101926960	ncRNA
28.4666	chr14	68861233	68861588	+	0.133333	NA	Intergenic	Intergenic	-65167	NM_001244701	677	Hs.85155	NM_004926	ENSG00000185650	ZFP36L1	BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1	ZFP36 ring finger protein like 1	protein-coding
28.3333-7	chr17	51968527	51968930	+	0.133333	NA	intron (NM_001082533, intron 3 of 9)	intron (NM_001082533, intron 3 of 9)	189986	NM_020178	56934	Hs.463466	NM_020178	ENSG00000154975	CA10	CA-RPX|CARPX|HUCEP-15	carbonic anhydrase 10	protein-coding
13.5666	chr20	52604873	52605025	+	0.133333	NA	Intergenic	L1M5|LINE|L1	-15889	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA
29.2-3	chr10	90359930	90360322	+	0.133333	NA	Intergenic	MSTA|LTR|ERVL-MaLR	180679	NR_110657	101926942	Hs.382666	NR_110657	ENSG00000236373	LINC02653	-	long intergenic non-protein coding RNA 2653	ncRNA
27.5333-4	chr11	79929376	79929784	+	0.133333	NA	Intergenic	Intergenic	-488550	NM_001098816	26011	Hs.213087	NM_001098816	ENSG00000149256	TENM4	Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4	teneurin transmembrane protein 4	protein-coding
19.2-11	chr5	25934059	25934277	+	0.133333	NA	Intergenic	Intergenic	743215	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
25.6	chr1	199250121	199250498	+	0.133333	NA	intron (NR_147896, intron 3 of 3)	L1M7|LINE|L1	101711	NR_147896	400800	Hs.369324	NR_147896	ENSG00000231718	LINC02789	-	long intergenic non-protein coding RNA 2789	ncRNA
17.1666-2	chr2	14299238	14299569	+	0.133333	NA	intron (NR_103814, intron 2 of 3)	intron (NR_103814, intron 2 of 3)	101555	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA
23.6666-3	chr5	124086891	124087104	+	0.133333	NA	intron (NR_125774, intron 4 of 5)	intron (NR_125774, intron 4 of 5)	351523	NR_125774	103724389	Hs.582211	NR_125774		LINC01170	-	long intergenic non-protein coding RNA 1170	ncRNA
34.8333-7	chr8	84220497	84221121	+	0.133333	NA	intron (NM_001354323, intron 1 of 7)	intron (NM_001354323, intron 1 of 7)	36143	NM_001354321	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
11.8-2	chr12	86241611	86241837	+	0.133333	NA	intron (NM_001351286, intron 4 of 7)	intron (NM_001351286, intron 4 of 7)	14667	NM_001351288	25834	Hs.589093	NM_013244	ENSG00000182050	MGAT4C	GNTIVH|HGNT-IV-H	MGAT4 family member C	protein-coding
20.0333-12	chr5	42008611	42008966	+	0.133333	NA	Intergenic	Intergenic	83507	NM_012176	26272	Hs.165575	NM_012176	ENSG00000151876	FBXO4	FBX4	F-box protein 4	protein-coding
18.2-3	chr10	91797115	91797411	+	0.133333	NA	intron (NR_108071, intron 1 of 1)	Tigger1|DNA|TcMar-Tigger	933	NR_108070	100507633	Hs.291528	NR_108070	ENSG00000228701	TNKS2-AS1	-	TNKS2 antisense RNA 1 (head to head)	ncRNA
13.8666	chr17	32866509	32866654	+	0.133333	NA	intron (NM_015194, intron 1 of 21)	intron (NM_015194, intron 1 of 21)	10543	NM_015194	4642	Hs.602063	NM_015194	ENSG00000176658	MYO1D	PPP1R108|myr4	myosin ID	protein-coding
17.4-5	chr13	106285487	106285618	+	0.133333	NA	Intergenic	Intergenic	-91012	NR_034119	728192	Hs.559194	NR_034119		LINC00460	-	long intergenic non-protein coding RNA 460	ncRNA
39.4666	chr10	99335031	99335382	+	0.133333	NA	intron (NM_020348, intron 1 of 10)	intron (NM_020348, intron 1 of 10)	5850	NM_020348	26507	Hs.274579	NM_020348	ENSG00000119946	CNNM1	ACDP1|CLP-1	cyclin and CBS domain divalent metal cation transport mediator 1	protein-coding
28.4666-7	chr7	77313613	77313846	+	0.133333	NA	intron (NR_146937, intron 28 of 31)	intron (NR_146937, intron 28 of 31)	-101469	NR_110073	101927243	Hs.547753	NR_110073		LOC101927243	-	uncharacterized LOC101927243	ncRNA
42.8666-7	chr8	36884535	36885035	+	0.133333	NA	intron (NM_001031836, intron 19 of 26)	intron (NM_001031836, intron 19 of 26)	100411	NR_134267	157855	Hs.13861	NM_001031836	ENSG00000215262	KCNU1	KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3	potassium calcium-activated channel subfamily U member 1	protein-coding
21.5-6	chr2	225022617	225022897	+	0.133333	NA	intron (NM_014689, intron 1 of 55)	intron (NM_014689, intron 1 of 55)	-12217	NR_039641	100616207		NR_039641	ENSG00000263828	MIR4439	-	microRNA 4439	ncRNA
32.6-6	chr5	10983270	10983603	+	0.133333	NA	intron (NM_001288715, intron 19 of 20)	intron (NM_001288715, intron 19 of 20)	-222202	NM_001291963	1611	Hs.75189	NM_004394	ENSG00000112977	DAP	-	death associated protein	protein-coding
47.7333-2	chr2	115661051	115661589	+	0.133333	NA	intron (NM_001321912, intron 6 of 25)	intron (NM_001321912, intron 6 of 25)	317505	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
44.4332	chr17	72455570	72456041	+	0.133333	NA	intron (NR_036488, intron 1 of 3)	intron (NR_036488, intron 1 of 3)	112994	NR_135222	146795	Hs.651743	NR_135222	ENSG00000264026	LINC02003	-	long intergenic non-protein coding RNA 2003	ncRNA
19.4667-2	chr10	64655154	64655386	+	0.133333	NA	Intergenic	L1MC1|LINE|L1	-170258	NR_001446	305	Hs.591361	NR_001446		ANXA2P3	ANX2L3|ANX2P3|LIP2|LPC2C	annexin A2 pseudogene 3	pseudo
34.2999	chr3	37172465	37173011	+	0.133333	NA	TTS (NR_145514)	TTS (NR_145514)	1844	NM_006309	9209	Hs.740522	NM_006309	ENSG00000093167	LRRFIP2	HUFI-2	LRR binding FLII interacting protein 2	protein-coding
21	chr1	32097554	32097791	+	0.133333	NA	intron (NM_001319679, intron 5 of 6)	AluYc|SINE|Alu	-10384	NM_012316	23633	Hs.470588	NM_012316	ENSG00000025800	KPNA6	IPOA7|KPNA7	karyopherin subunit alpha 6	protein-coding
13.1333-11	chr7	113246941	113247100	+	0.133333	NA	Intergenic	L2c|LINE|L2	-128438	NM_001352687	401397	Hs.117929	NM_001352687	ENSG00000214194	SMIM30	LINC00998	small integral membrane protein 30	protein-coding
40.3333-7	chrX	7239452	7239878	+	0.133333	NA	intron (NM_000351, intron 1 of 9)	intron (NM_000351, intron 1 of 9)	-12579	NM_001320753	412	Hs.522578	NM_000351	ENSG00000101846	STS	ARSC|ARSC1|ASC|ES|SSDD|XLI	steroid sulfatase	protein-coding
16.6-4	chr12	46126680	46126860	+	0.133333	NA	Intergenic	Intergenic	-136196	NM_004719	9169	Hs.210367	NM_004719	ENSG00000139218	SCAF11	CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP	SR-related CTD associated factor 11	protein-coding
37.5999-2	chr3	99085630	99085992	+	0.133333	NA	Intergenic	Intergenic	-184116	NM_080927	131566	Hs.203691	NM_080927	ENSG00000057019	DCBLD2	CLCP1|ESDN	discoidin, CUB and LCCL domain containing 2	protein-coding
31.6667-9	chr5	31954369	31954807	+	0.133333	NA	intron (NM_178140, intron 2 of 24)	intron (NM_178140, intron 2 of 24)	-18429	NR_036241	100422874		NR_036241	ENSG00000266243	MIR4279	-	microRNA 4279	ncRNA
50.0666	chr4	86233787	86234444	+	0.133333	NA	intron (NM_001363657, intron 2 of 13)	intron (NM_001363657, intron 2 of 13)	114309	NR_110879	101929064	Hs.662221	NR_110879	ENSG00000250062	LOC101929064	-	uncharacterized LOC101929064	ncRNA
44.4-3	chr11	38135757	38136302	+	0.133333	NA	Intergenic	Intergenic	197428	NR_135110	105376633	Hs.135690	NR_135110	ENSG00000254516	LINC02760	-	long intergenic non-protein coding RNA 2760	ncRNA
48.5333-3	chr2	137532994	137533535	+	0.133333	NA	intron (NM_001316349, intron 15 of 27)	intron (NM_001316349, intron 15 of 27)	394668	NR_120402	101928273	Hs.560928	NR_120402		LOC101928273	-	uncharacterized LOC101928273	ncRNA
28.3-2	chr15	64683463	64683703	+	0.133333	NA	3' UTR (NM_015042, exon 9 of 9)	3' UTR (NM_015042, exon 9 of 9)	19698	NM_002537	4947	Hs.744924	NM_002537	ENSG00000180304	OAZ2	AZ2	ornithine decarboxylase antizyme 2	protein-coding
44.5667-3	chr4	99782926	99783619	+	0.133333	NA	Intergenic	LTR48B|LTR|ERV1	-33555	NM_001306151	27071	Hs.436271	NM_014395	ENSG00000070190	DAPP1	BAM32	dual adaptor of phosphotyrosine and 3-phosphoinositides 1	protein-coding
27.8999	chr15	36142927	36143319	+	0.133333	NA	Intergenic	L1MC1|LINE|L1	216267	NR_039735	100616293		NR_039735	ENSG00000265098	MIR4510	mir-4510	microRNA 4510	ncRNA
54.6666-2	chr17	62066017	62066526	+	0.133333	NA	promoter-TSS (NM_005121)	promoter-TSS (NM_005121)	-993	NM_005121	9969	Hs.282678	NM_005121	ENSG00000108510	MED13	ARC250|DRIP250|HSPC221|THRAP1|TRAP240	mediator complex subunit 13	protein-coding
37.5333-7	chr8	132179035	132179757	+	0.133333	NA	intron (NM_001204824, intron 4 of 14)	MIR|SINE|MIR	-74131	NM_001145095	10086	Hs.285026	NM_005712	ENSG00000132297	HHLA1	PLA2L	HERV-H LTR-associating 1	protein-coding
26.2	chr10	11918371	11918706	+	0.133333	NA	Intergenic	Intergenic	-23828	NR_038222	219731	Hs.576787	NR_038222	ENSG00000225778	PROSER2-AS1	-	PROSER2 antisense RNA 1	ncRNA
21.7666-2	chr3	82184601	82184889	+	0.133333	NA	intron (NR_147146, intron 1 of 8)	MER5A|DNA|hAT-Charlie	198603	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
20.8666-2	chr14	68013694	68013884	+	0.133333	NA	intron (NM_133509, intron 7 of 10)	intron (NM_133509, intron 7 of 10)	190197	NM_001321815	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
17.6667-7	chr5	32215372	32215570	+	0.133333	NA	Intergenic	L2|LINE|L2	-41152	NM_022130	64083	Hs.408909	NM_022130	ENSG00000113384	GOLPH3	GOPP1|GPP34|MIDAS|Vps74	golgi phosphoprotein 3	protein-coding
13.0667-10	chr7	49384689	49384909	+	0.133333	NA	Intergenic	L1MC2|LINE|L1	-388839	NM_198570	375567	Hs.629302	NM_198570	ENSG00000188730	VWC2	PSST739|UNQ739	von Willebrand factor C domain containing 2	protein-coding
27.3999	chr10	43089113	43089350	+	0.133333	NA	intron (NM_020630, intron 1 of 18)	intron (NM_020630, intron 1 of 18)	12162	NM_020975	5979	Hs.350321	NM_000323	ENSG00000165731	RET	CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1	ret proto-oncogene	protein-coding
14.1666	chr12	32297327	32297594	+	0.133333	NA	intron (NR_148725, intron 3 of 9)	AluSz6|SINE|Alu	-102098	NM_001370298	121512	Hs.117835	NM_139241	ENSG00000139132	FGD4	CMT4H|FRABP|ZFYVE6	FYVE, RhoGEF and PH domain containing 4	protein-coding
23.4666-3	chr7	50545108	50545371	+	0.133333	NA	intron (NM_001082971, intron 1 of 14)	Tigger17a|DNA|TcMar-Tigger	13480	NR_033845	100129427	Hs.680434	NR_033845	ENSG00000226122	DDC-AS1	-	DDC antisense RNA 1	ncRNA
37.9999-2	chr7	96090308	96090921	+	0.133333	NA	intron (NM_001278422, intron 15 of 15)	intron (NM_001278422, intron 15 of 15)	129142	NR_030322	693176		NR_030322	ENSG00000208025	MIR591	MIRN591|hsa-mir-591	microRNA 591	ncRNA
29.5667-3	chr2	37307234	37307704	+	0.133333	NA	intron (NM_005813, intron 1 of 17)	intron (NM_005813, intron 1 of 17)	9615	NM_005813	23683	Hs.660757	NM_005813	ENSG00000115825	PRKD3	EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU	protein kinase D3	protein-coding
15.1-4	chr11	29116813	29116980	+	0.133333	NA	Intergenic	MER5B|DNA|hAT-Charlie	-477517	NR_149107	105376606	Hs.577275	NR_149106	ENSG00000255117	LINC02546	-	long intergenic non-protein coding RNA 2546	ncRNA
18.1-3	chr11	84849240	84849495	+	0.133333	NA	intron (NM_001351274, intron 5 of 26)	L2b|LINE|L2	74054	NM_001364	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
22.6-17	chr5	160451446	160451873	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-16592	NR_132748	107075116	Hs.735831	NR_132748	ENSG00000253522	MIR3142HG	-	MIR3142 host gene	ncRNA
21.9333-16	chr4	99603834	99604105	+	0.133333	NA	intron (NM_001300785, intron 10 of 17)	intron (NM_001300785, intron 10 of 17)	39891	NM_001300785	4547	Hs.195799	NM_000253	ENSG00000138823	MTTP	ABL|MTP	microsomal triglyceride transfer protein	protein-coding
29.5333-2	chr11	13145574	13146069	+	0.133333	NA	Intergenic	Intergenic	-130831	NM_001351804	406	Hs.65734	NM_001178	ENSG00000133794	ARNTL	BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5	aryl hydrocarbon receptor nuclear translocator like	protein-coding
28.7999-3	chr2	138815053	138815426	+	0.133333	NA	Intergenic	MER33|DNA|hAT-Charlie	-34849	NM_007226	11249	Hs.435019	NM_007226	ENSG00000144227	NXPH2	NPH2	neurexophilin 2	protein-coding
50.5333-3	chr3	79851052	79851767	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	-83411	NM_002941	6091	Hs.744218	NM_002941	ENSG00000169855	ROBO1	DUTT1|SAX3	roundabout guidance receptor 1	protein-coding
22.7333-4	chr2	59443820	59444211	+	0.133333	NA	Intergenic	AluSc|SINE|Alu	226307	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
39.6	chr1	182118834	182119414	+	0.133333	NA	Intergenic	Intergenic	-57412	NM_001009992	127665	Hs.684328	NM_001009992	ENSG00000179930	ZNF648	-	zinc finger protein 648	protein-coding
29.7999	chr12	24906856	24907365	+	0.133333	NA	intron (NM_001178091, intron 1 of 9)	intron (NM_001178091, intron 1 of 9)	-4043	NM_001178093	586	Hs.438993	NM_005504	ENSG00000060982	BCAT1	BCATC|BCT1|ECA39|MECA39|PNAS121|PP18	branched chain amino acid transaminase 1	protein-coding
28.2333-9	chr5	5599729	5600185	+	0.133333	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	177280	NM_015325	23379	Hs.449296	NM_015325	ENSG00000164151	ICE1	KIAA0947	interactor of little elongation complex ELL subunit 1	protein-coding
16.2-3	chr10	67619660	67619854	+	0.133333	NA	intron (NM_001127384, intron 2 of 17)	intron (NM_001127384, intron 2 of 17)	45903	NM_001291133	29119	Hs.21375	NM_013266	ENSG00000183230	CTNNA3	ARVD13|VR22	catenin alpha 3	protein-coding
51.2666	chr14	73152893	73153497	+	0.133333	NA	intron (NM_000021, intron 3 of 11)	intron (NM_000021, intron 3 of 11)	16688	NM_000021	5663	Hs.3260	NM_000021	ENSG00000080815	PSEN1	ACNINV3|AD3|FAD|PS-1|PS1|S182	presenilin 1	protein-coding
59.2667	chr13	111009476	111010310	+	0.133333	NA	Intergenic	Intergenic	43866	NR_126378	104355135	Hs.649708	NR_126378		LINC00431	-	long intergenic non-protein coding RNA 431	ncRNA
16.2-16	chr4	154620792	154620994	+	0.133333	NA	Intergenic	MER5A|DNA|hAT-Charlie	-8085	NM_000509	2266	Hs.727584	NM_000509	ENSG00000171557	FGG	-	fibrinogen gamma chain	protein-coding
37.2666	chr13	84263436	84263969	+	0.133333	NA	intron (NR_046871, intron 3 of 6)	intron (NR_046871, intron 3 of 6)	123100	NR_046871	100874128	Hs.578060	NR_046871		LINC00333	NCRNA00333	long intergenic non-protein coding RNA 333	ncRNA
37.4333-6	chr13	108375462	108375896	+	0.133333	NA	Intergenic	L1MA3|LINE|L1	106050	NM_001145645	10673	Hs.525157	NM_006573	ENSG00000102524	TNFSF13B	BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4	TNF superfamily member 13b	protein-coding
50.0332	chr5	93002863	93003268	+	0.133333	NA	Intergenic	Intergenic	568278	NR_109825	441094	Hs.457407	NR_015369	ENSG00000237187	NR2F1-AS1	-	NR2F1 antisense RNA 1	ncRNA
20.1333-14	chr3	56119133	56119390	+	0.133333	NA	intron (NR_132749, intron 6 of 17)	intron (NR_132749, intron 6 of 17)	-266667	NR_037502	100500875		NR_037502	ENSG00000264013	MIR3938	-	microRNA 3938	ncRNA
12.4667-6	chr8	73507322	73507489	+	0.133333	NA	intron (NM_001164383, intron 8 of 9)	Tigger1|DNA|TcMar-Tigger	87331	NR_038406	100128126	Hs.679921	NR_038406	ENSG00000253302	STAU2-AS1	-	STAU2 antisense RNA 1	ncRNA
28.2666-3	chr8	137353800	137354053	+	0.133333	NA	Intergenic	L1PA14|LINE|L1	59662	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
34.3333-4	chr11	91745452	91745861	+	0.133333	NA	Intergenic	L1MC|LINE|L1	-479378	NM_001367949	120114	Hs.98523	NM_001008781	ENSG00000165323	FAT3	CDHF15|CDHR10|hFat3	FAT atypical cadherin 3	protein-coding
26.6-2	chr1	150283373	150283631	+	0.133333	NA	exon (NM_144697, exon 1 of 5)	exon (NM_144697, exon 1 of 5)	948	NM_001300838	148523	Hs.54680	NM_144697	ENSG00000159208	CIART	C1orf51|CHRONO|GM129	circadian associated repressor of transcription	protein-coding
25.9-7	chr3	123076158	123076481	+	0.133333	NA	intron (NM_006810, intron 1 of 16)	MIRc|SINE|MIR	9294	NR_028444	10954	Hs.477352	NM_006810	ENSG00000065485	PDIA5	PDIR	protein disulfide isomerase family A member 5	protein-coding
25.5333-10	chr5	37831190	37831568	+	0.133333	NA	intron (NM_001278098, intron 1 of 2)	L2a|LINE|L2	3443	NM_001278098	2668	Hs.248114	NM_000514	ENSG00000168621	GDNF	ATF|ATF1|ATF2|HFB1-GDNF|HSCR3	glial cell derived neurotrophic factor	protein-coding
45.3333	chr7	109761303	109761907	+	0.133333	NA	Intergenic	L1P3|LINE|L1	198608	NR_003024	442720	Hs.530096	NR_003024	ENSG00000237064	EIF3IP1	RG208K23	eukaryotic translation initiation factor 3 subunit I pseudogene 1	pseudo
27.2333-3	chr2	14248786	14249323	+	0.133333	NA	intron (NR_103814, intron 2 of 3)	L1ME2|LINE|L1	151904	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA
7.63331	chr10	108515605	108515662	+	0.133333	NA	Intergenic	L1MB5|LINE|L1	-446340	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
51.4	chr1	115707652	115708334	+	0.133333	NA	intron (NM_001232, intron 8 of 10)	Plat_L3|LINE|CR1	60812	NM_001232	845	Hs.57975	NM_001232	ENSG00000118729	CASQ2	PDIB2	calsequestrin 2	protein-coding
11.8-7	chr6	37187811	37187899	+	0.133333	NA	Intergenic	Intergenic	17703	NM_001243186	5292	Hs.81170	NM_002648	ENSG00000137193	PIM1	PIM	Pim-1 proto-oncogene, serine/threonine kinase	protein-coding
17.4666-2	chr11	61750606	61750801	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-1933	NM_001127392	745	Hs.473109	NM_013279	ENSG00000124920	MYRF	11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47	myelin regulatory factor	protein-coding
35.3333-13	chr7	12949834	12950159	+	0.133333	NA	Intergenic	Intergenic	262363	NM_005738	10124	Hs.245540	NM_005738	ENSG00000122644	ARL4A	ARL4	ADP ribosylation factor like GTPase 4A	protein-coding
24.0666	chr1	175331394	175331786	+	0.133333	NA	intron (NM_003285, intron 20 of 22)	intron (NM_003285, intron 20 of 22)	-138603	NM_001162893	9674	Hs.518138	NM_014656	ENSG00000235750	KIAA0040	-	KIAA0040	protein-coding
21.0333-4	chr12	10044408	10044754	+	0.133333	NA	intron (NM_207345, intron 2 of 8)	L2a|LINE|L2	13899	NM_207345	283420	Hs.531189	NM_207345	ENSG00000197992	CLEC9A	CD370|DNGR-1|DNGR1|UNQ9341	C-type lectin domain containing 9A	protein-coding
37.9333-5	chr5	148424796	148425186	+	0.133333	NA	intron (NM_001271723, intron 13 of 20)	intron (NM_001271723, intron 13 of 20)	41033	NM_030793	81545	Hs.483772	NM_030793	ENSG00000145868	FBXO38	Fbx38|HMN2D|MOKA|SP329	F-box protein 38	protein-coding
24.0667-4	chr11	80152451	80152844	+	0.133333	NA	Intergenic	MIR|SINE|MIR	610156	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
19.8-5	chr16	11105484	11105709	+	0.133333	NA	intron (NM_015226, intron 18 of 22)	intron (NM_015226, intron 18 of 22)	150586	NM_003745	8651	Hs.50640	NM_003745	ENSG00000185338	SOCS1	CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3	suppressor of cytokine signaling 1	protein-coding
18.5333-4	chr10	98161994	98162141	+	0.133333	NA	intron (NM_001351010, intron 4 of 11)	L1MC4a|LINE|L1	27410	NM_001256619	27291	Hs.419800	NM_014472	ENSG00000166024	R3HCC1L	C10orf28|GIDRP86|GIDRP88|PSORT	R3H domain and coiled-coil containing 1 like	protein-coding
20.2-9	chr3	102273791	102274075	+	0.133333	NA	Intergenic	L1MA3|LINE|L1	110228	NR_135549	101929411	Hs.506540	NR_135549		LOC101929411	-	uncharacterized LOC101929411	ncRNA
26.4333-5	chr13	62882779	62883379	+	0.133333	NA	Intergenic	THE1C-int|LTR|ERVL-MaLR	-75720	NR_120403	100874176	Hs.402083	NR_047029		LINC00448	-	long intergenic non-protein coding RNA 448	ncRNA
25.6666-4	chr20	53573844	53574124	+	0.133333	NA	intron (NR_110051, intron 5 of 5)	AluSx1|SINE|Alu	9113	NM_006526	7764	Hs.155040	NM_006526	ENSG00000171940	ZNF217	ZABC1	zinc finger protein 217	protein-coding
32.6666-5	chr7	98899074	98899495	+	0.133333	NA	intron (NM_003496, intron 8 of 70)	intron (NM_003496, intron 8 of 70)	17587	NR_132754	106633801		NR_132754		SCARNA28	ZL1	small Cajal body-specific RNA 28	ncRNA
64.6999	chr19	45468261	45468900	+	0.133333	NA	5' UTR (NM_006732, exon 1 of 4)	5' UTR (NM_006732, exon 1 of 4)	584	NM_006732	2354	Hs.590958	NM_006732	ENSG00000125740	FOSB	AP-1|G0S3|GOS3|GOSB	FosB proto-oncogene, AP-1 transcription factor subunit	protein-coding
12.0667-10	chr21	30617220	30617498	+	0.133333	NA	TTS (NM_181615)	TTS (NM_181615)	934	NM_181615	337975	Hs.553697	NM_181615	ENSG00000244624	KRTAP20-1	KAP20.1	keratin associated protein 20-1	protein-coding
37.7999-2	chr8	101483920	101484244	+	0.133333	NA	Intergenic	AluSz6|SINE|Alu	-8357	NM_024915	79977	Hs.661088	NM_024915	ENSG00000083307	GRHL2	BOM|DFNA28|ECTDS|PPCD4|TFCP2L3	grainyhead like transcription factor 2	protein-coding
32.8666-8	chr8	92751283	92751560	+	0.133333	NA	intron (NR_046114, intron 1 of 2)	intron (NR_046114, intron 1 of 2)	34639	NR_046114	441369	Hs.521683	NR_046114	ENSG00000248858	FLJ46284	-	uncharacterized LOC441369	ncRNA
46.8667-3	chr2	234185774	234186394	+	0.133333	NA	Intergenic	Intergenic	135382	NM_006944	6694	Hs.444488	NM_006944	ENSG00000072080	SPP2	SPP-24|SPP24	secreted phosphoprotein 2	protein-coding
29.8333-6	chr5	73816259	73816556	+	0.133333	NA	intron (NM_001244364, intron 1 of 27)	intron (NM_001244364, intron 1 of 27)	2861	NM_001244364	64283	Hs.482521	NM_001080479	ENSG00000214944	ARHGEF28	RGNEF|RIP2|p190RHOGEF	Rho guanine nucleotide exchange factor 28	protein-coding
14.5333-7	chr2	234059552	234059825	+	0.133333	NA	intron (NM_006944, intron 3 of 7)	LTR47A|LTR|ERVL	8986	NM_006944	6694	Hs.444488	NM_006944	ENSG00000072080	SPP2	SPP-24|SPP24	secreted phosphoprotein 2	protein-coding
30.7333-4	chr11	80439418	80439867	+	0.133333	NA	Intergenic	Intergenic	323161	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
34.8666	chr1	194491103	194491452	+	0.133333	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	1186532	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
15.8666-2	chr14	42887385	42887553	+	0.133333	NA	Intergenic	Intergenic	1280613	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
38.7333	chr10	132562160	132562610	+	0.133333	NA	intron (NM_005539, intron 1 of 15)	intron (NM_005539, intron 1 of 15)	24598	NM_005539	3632	Hs.523360	NM_005539	ENSG00000068383	INPP5A	5PTASE	inositol polyphosphate-5-phosphatase A	protein-coding
28.7999	chr11	118710976	118711473	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-31574	NM_007180	11181	Hs.129712	NM_007180	ENSG00000118094	TREH	TRE|TREA|TREHD	trehalase	protein-coding
13.3333-12	chr22	37852618	37852780	+	0.133333	NA	intron (NM_001363785, intron 3 of 11)	MER50-int|LTR|ERV1	3280	NM_016091	51386	Hs.446852	NM_016091	ENSG00000100129	EIF3L	EIF3EIP|EIF3S11|EIF3S6IP|HSPC021|HSPC025|MSTP005	eukaryotic translation initiation factor 3 subunit L	protein-coding
44.1999-3	chr3	22212299	22212851	+	0.133333	NA	Intergenic	Intergenic	255436	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
24.0666-3	chr10	15934454	15934752	+	0.133333	NA	Intergenic	Intergenic	-74070	NM_001318330	80013	Hs.158870	NM_024948	ENSG00000148481	MINDY3	C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042	MINDY lysine 48 deubiquitinase 3	protein-coding
38.0667-4	chr3	191563818	191564351	+	0.133333	NA	intron (NR_120606, intron 4 of 6)	intron (NR_120606, intron 4 of 6)	102921	NM_001083308	152138	Hs.690618	NM_001083308	ENSG00000253548	PYDC2	POP2|cPOP2	pyrin domain containing 2	protein-coding
20.7333-12	chr21	33657885	33658110	+	0.133333	NA	intron (NM_001001132, intron 1 of 29)	Tigger2a|DNA|TcMar-Tigger	15496	NM_001331012	6453	Hs.90221	NM_003024	ENSG00000205726	ITSN1	ITSN|SH3D1A|SH3P17	intersectin 1	protein-coding
45.4666	chr14	60146005	60146425	+	0.133333	NA	3' UTR (NM_001330177, exon 11 of 11)	3' UTR (NM_001330177, exon 11 of 11)	19183	NM_016029	51635	Hs.59719	NM_016029	ENSG00000100612	DHRS7	CGI-86|SDR34C1|retDSR4|retSDR4	dehydrogenase/reductase 7	protein-coding
15.8666-3	chr4	151705466	151705617	+	0.133333	NA	intron (NM_001363341, intron 6 of 11)	MIR3|SINE|MIR	55466	NM_004564	5188	Hs.119316	NM_004564	ENSG00000059691	GATB	HSPC199|PET112|PET112L	glutamyl-tRNA amidotransferase subunit B	protein-coding
37.9333-3	chr21	42600779	42601141	+	0.133333	NA	intron (NR_131192, intron 1 of 1)	MER4B-int|LTR|ERV1	14135	NR_131192	101928233	Hs.534827	NR_131192	ENSG00000225431	LINC01671	-	long intergenic non-protein coding RNA 1671	ncRNA
22.4-12	chr2	169132717	169132983	+	0.133333	NA	intron (NM_004525, intron 76 of 78)	intron (NM_004525, intron 76 of 78)	51743	NM_001142271	10170	Hs.179608	NM_005771	ENSG00000073737	DHRS9	3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4	dehydrogenase/reductase 9	protein-coding
21.4-5	chr11	81352523	81352836	+	0.133333	NA	Intergenic	Intergenic	538157	NR_036186	100422823		NR_036186	ENSG00000264110	MIR4300	-	microRNA 4300	ncRNA
31.5666-2	chr17	57711611	57711904	+	0.133333	NA	Intergenic	L1MC5|LINE|L1	33542	NM_001282544	101927581	Hs.540784	NM_001282544	ENSG00000166329	CCDC182	-	coiled-coil domain containing 182	protein-coding
15.1333-10	chr4	45731381	45731553	+	0.133333	NA	Intergenic	MER2|DNA|TcMar-Tigger	392587	NM_173536	2565	Hs.375051	NM_173536	ENSG00000163285	GABRG1	-	gamma-aminobutyric acid type A receptor gamma1 subunit	protein-coding
23.3333-15	chr7	49304476	49304895	+	0.133333	NA	Intergenic	L1MEc|LINE|L1	380138	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
41.8666-10	chr7	9099896	9100302	+	0.133333	NA	Intergenic	L1ME1|LINE|L1	-534171	NR_002790	168741	Hs.545134	NR_002790		PER4	-	period circadian regulator 3 pseudogene	pseudo
26.9-15	chr8	130512459	130512897	+	0.133333	NA	Intergenic	THE1D|LTR|ERVL-MaLR	-69004	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	protein-coding
9.69999	chr6	34977772	34977902	+	0.133333	NA	intron (NM_015245, intron 3 of 23)	intron (NM_015245, intron 3 of 23)	88582	NM_015245	23294	Hs.656492	NM_015245	ENSG00000064999	ANKS1A	ANKS1	ankyrin repeat and sterile alpha motif domain containing 1A	protein-coding
10.8667-5	chr2	20348648	20348782	+	0.133333	NA	intron (NM_001352920, intron 1 of 19)	AluJb|SINE|Alu	2129	NM_001352927	23369	Hs.467824	NM_015317	ENSG00000055917	PUM2	PUMH2|PUML2	pumilio RNA binding family member 2	protein-coding
37.5667-2	chr2	66815108	66815504	+	0.133333	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	-89130	NR_110169	101060019	Hs.116425	NR_110169	ENSG00000230525	LINC01799	-	long intergenic non-protein coding RNA 1799	ncRNA
24.6333-12	chr8	74141870	74142150	+	0.133333	NA	Intergenic	L2c|LINE|L2	150618	NM_015364	23643	Hs.726603	NM_015364	ENSG00000154589	LY96	ESOP-1|MD-2|MD2|ly-96	lymphocyte antigen 96	protein-coding
39.1666-3	chr6	151233402	151233695	+	0.133333	NA	Intergenic	L1MD1|LINE|L1	-5091	NR_125868	102723831	Hs.684425	NR_125868		LOC102723831	-	uncharacterized LOC102723831	ncRNA
44.9333-4	chr8	28533006	28533434	+	0.133333	NA	intron (NM_017412, intron 5 of 7)	FLAM_C|SINE|Alu	-28038	NR_036250	100422903		NR_036250	ENSG00000265251	MIR4288	-	microRNA 4288	ncRNA
37.8666-2	chr15	98938064	98938370	+	0.133333	NA	intron (NM_000875, intron 17 of 20)	intron (NM_000875, intron 17 of 20)	67439	NM_001102612	145814	Hs.592021	NM_001102612	ENSG00000183571	PGPEP1L	-	pyroglutamyl-peptidase I like	protein-coding
36.5999	chr3	18284980	18285614	+	0.133333	NA	Intergenic	Intergenic	140042	NM_002971	6304	Hs.517717	NM_002971	ENSG00000182568	SATB1	-	SATB homeobox 1	protein-coding
20.4667-4	chr10	43702466	43702742	+	0.133333	NA	Intergenic	Intergenic	-53723	NM_006973	7580	Hs.522885	NM_006973	ENSG00000169740	ZNF32	KOX30	zinc finger protein 32	protein-coding
34.6333-5	chr8	127643488	127644211	+	0.133333	NA	Intergenic	Intergenic	90118	NR_117101	100270680	Hs.333720	NR_117101	ENSG00000249375	CASC11	CARLO7|CARLo-7|LINC00990|TCONS_00014535	cancer susceptibility 11	ncRNA
25.1333-3	chr10	14012728	14012996	+	0.133333	NA	intron (NM_018027, intron 2 of 24)	intron (NM_018027, intron 2 of 24)	-4312	NM_001318336	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding
17.8667-5	chr14	65574594	65574844	+	0.133333	NA	intron (NM_178156, intron 2 of 9)	intron (NM_178156, intron 2 of 9)	103617	NR_030355	693210		NR_030355	ENSG00000207781	MIR625	MIRN625|hsa-mir-625	microRNA 625	ncRNA
39.7999	chr13	92384997	92385418	+	0.133333	NA	intron (NM_004466, intron 7 of 7)	intron (NM_004466, intron 7 of 7)	-33000	NR_120382	100873970	Hs.567269	NR_120382		GPC5-AS2	-	GPC5 antisense RNA 2	ncRNA
22.0666-4	chr4	71585160	71585381	+	0.133333	NA	Intergenic	L2b|LINE|L2	198809	NM_000583	2638	Hs.418497	NM_000583	ENSG00000145321	GC	DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP	GC vitamin D binding protein	protein-coding
15.5667-2	chr12	21696286	21696452	+	0.133333	NA	Intergenic	Intergenic	-38514	NM_001315537	3945	Hs.446149	NM_002300	ENSG00000111716	LDHB	HEL-S-281|LDH-B|LDH-H|LDHBD|TRG-5	lactate dehydrogenase B	protein-coding
18.3-2	chr1	111921753	111921980	+	0.133333	NA	intron (NM_172198, intron 2 of 6)	intron (NM_172198, intron 2 of 6)	12209	NR_046619	100873995	Hs.535274	NR_046619	ENSG00000237556	KCND3-AS1	-	KCND3 antisense RNA 1	ncRNA
33.7333-7	chr5	28087925	28088322	+	0.133333	NA	Intergenic	L2a|LINE|L2	199542	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
40.4999-2	chr3	109834076	109834499	+	0.133333	NA	Intergenic	Intergenic	231459	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
28.3333-2	chr10	70247371	70247821	+	0.133333	NA	3' UTR (NM_022146, exon 4 of 4)	3' UTR (NM_022146, exon 4 of 4)	-14167	NM_021129	5464	Hs.437403	NM_021129	ENSG00000180817	PPA1	HEL-S-66p|IOPPP|PP|PP1|SID6-8061	pyrophosphatase (inorganic) 1	protein-coding
33.4-9	chr8	143377316	143377692	+	0.133333	NA	intron (NM_052924, intron 4 of 14)	intron (NM_052924, intron 4 of 14)	8628	NM_052924	114822	Hs.521912	NM_052924	ENSG00000158106	RHPN1	ODF5|RHOPHILIN|RHPN	rhophilin Rho GTPase binding protein 1	protein-coding
14.7333-4	chr13	73816710	73816957	+	0.133333	NA	intron (NM_007249, intron 4 of 7)	MLT1H2|LTR|ERVL-MaLR	252589	NR_047009	100874155	Hs.672679	NR_047009		LINC00392	-	long intergenic non-protein coding RNA 392	ncRNA
40.9333-3	chr2	67727911	67728452	+	0.133333	NA	Intergenic	Intergenic	97381	NR_110271	101927701	Hs.348697	NR_110271	ENSG00000237013	LINC01812	-	long intergenic non-protein coding RNA 1812	ncRNA
29.5-9	chr9	102460023	102460445	+	0.133333	NA	Intergenic	L1PA12|LINE|L1	-59403	NR_103830	414319	Hs.385790	NR_103830	ENSG00000204250	LINC00587	C9orf107|bA785H23.1	long intergenic non-protein coding RNA 587	ncRNA
18.9666	chr17	75298301	75298476	+	0.133333	NA	Intergenic	AluSq|SINE|Alu	-8939	NM_021734	60386	Hs.514470	NM_021734	ENSG00000125454	SLC25A19	DNC|MCPHA|MUP1|THMD3|THMD4|TPC	solute carrier family 25 member 19	protein-coding
21.1333-14	chr5	54732362	54732647	+	0.133333	NA	intron (NR_104658, intron 1 of 2)	L1MEc|LINE|L1	11754	NR_104658	102467080	Hs.637409	NR_104658		LOC102467080	-	uncharacterized LOC102467080	ncRNA
43.5-3	chr4	130645959	130646378	+	0.133333	NA	Intergenic	L1M2|LINE|L1	269807	NR_147186	105377420		NR_147186		LINC02479	-	long intergenic non-protein coding RNA 2479	ncRNA
39.2999	chr8	63455175	63455611	+	0.133333	NA	Intergenic	HAL1ME|LINE|L1	-10456	NR_125825	102724612	Hs.97639	NR_125825	ENSG00000253894	LOC102724612	-	uncharacterized LOC102724612	ncRNA
8.73333-3	chr3	147954216	147954332	+	0.133333	NA	Intergenic	L1M5|LINE|L1	-123885	NR_134937	100507461	Hs.112623	NR_134937	ENSG00000241131	LINC02032	-	long intergenic non-protein coding RNA 2032	ncRNA
21.2666-4	chr21	21620535	21620757	+	0.133333	NA	Intergenic	Intergenic	116673	NR_038872	378828	Hs.551009	NR_038872	ENSG00000238265	LINC00317	C21orf117|NCRNA00317|PRED89	long intergenic non-protein coding RNA 317	ncRNA
30.1333-8	chr3	4593461	4593782	+	0.133333	NA	intron (NM_001168272, intron 4 of 60)	intron (NM_001168272, intron 4 of 60)	100273	NM_001168272	3708	Hs.567295	NM_002222	ENSG00000150995	ITPR1	ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29	inositol 1,4,5-trisphosphate receptor type 1	protein-coding
17.7333-11	chr5	29989173	29989408	+	0.133333	NA	Intergenic	Intergenic	108730	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
17.4-3	chr10	69563002	69563229	+	0.133333	NA	Intergenic	Intergenic	10307	NM_020999	50674	Hs.532682	NM_020999	ENSG00000122859	NEUROG3	Atoh5|Math4B|NGN-3|bHLHa7|ngn3	neurogenin 3	protein-coding
20.7333-3	chr10	29669178	29669565	+	0.133333	NA	intron (NM_001323599, intron 2 of 38)	L2a|LINE|L2	-34400	NM_021738	6840	Hs.499209	NM_003174	ENSG00000197321	SVIL	-	supervillin	protein-coding
9.46665	chr4	85236928	85237028	+	0.133333	NA	Intergenic	Intergenic	-238172	NM_001025616	83478	Hs.444229	NM_031305	ENSG00000138639	ARHGAP24	FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP	Rho GTPase activating protein 24	protein-coding
25.1666-5	chr8	124702557	124702780	+	0.133333	NA	intron (NM_001282971, intron 2 of 14)	intron (NM_001282971, intron 2 of 14)	25805	NM_001363301	9788	Hs.336994	NM_014751	ENSG00000170873	MTSS1	MIM|MIMA|MIMB	MTSS I-BAR domain containing 1	protein-coding
30.3999	chr1	108143880	108144329	+	0.133333	NA	intron (NM_013386, intron 7 of 9).2	L2|LINE|L2	48731	NM_213651	29957	Hs.656870	NM_013386	ENSG00000085491	SLC25A24	APC1|SCAMC-1|SCAMC1	solute carrier family 25 member 24	protein-coding
37.7333-3	chr17	49421478	49421923	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	-6795	NM_001281715	5245	Hs.514303	NM_002634	ENSG00000167085	PHB	HEL-215|HEL-S-54e|PHB1	prohibitin	protein-coding
40.3333-3	chr16	53207446	53207918	+	0.133333	NA	promoter-TSS (NM_001352158)	promoter-TSS (NM_001352158)	-283	NM_001352157	80205	Hs.59159	NM_015287	ENSG00000177200	CHD9	AD013|CHD-9|CReMM|KISH2|PRIC320	chromodomain helicase DNA binding protein 9	protein-coding
13.9-9	chr8	79728930	79729153	+	0.133333	NA	Intergenic	Intergenic	37434	NM_001282851	23462	Hs.234434	NM_012258	ENSG00000164683	HEY1	BHLHb31|CHF2|HERP2|HESR1|HRT-1|NERP2|OAF1|hHRT1	hes related family bHLH transcription factor with YRPW motif 1	protein-coding
28.0666	chr2	44900557	44901002	+	0.133333	NA	Intergenic	Intergenic	38109	NR_147194	107985879	Hs.436392	NR_147194	ENSG00000259439	LINC01833	K21.1|RP11-89	long intergenic non-protein coding RNA 1833	ncRNA
21.2666-5	chr3	70704336	70704682	+	0.133333	NA	Intergenic	Intergenic	360415	NM_001244813	27086	Hs.59368	NM_032682	ENSG00000114861	FOXP1	12CC4|HSPC215|MFH|QRF1|hFKH1B	forkhead box P1	protein-coding
46.6666	chr11	41816272	41816807	+	0.133333	NA	intron (NR_120584, intron 2 of 5)	MER101-int|LTR|ERV1	101971	NR_120584	102723644	Hs.564283	NR_120584	ENSG00000255171	LINC01499	-	long intergenic non-protein coding RNA 1499	ncRNA
41.3999-4	chr7	159115410	159115815	+	0.133333	NA	intron (NR_130758, intron 2 of 12)	intron (NR_130758, intron 2 of 12)	-18408	NM_001308259	7434	Hs.585052	NM_003382	ENSG00000106018	VIPR2	C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R	vasoactive intestinal peptide receptor 2	protein-coding
36.7999	chr7	157256304	157256680	+	0.133333	NA	intron (NM_014671, intron 21 of 22)	intron (NM_014671, intron 21 of 22)	-80512	NM_001363676	10049	Hs.490745	NM_005494	ENSG00000105993	DNAJB6	DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1	DnaJ heat shock protein family (Hsp40) member B6	protein-coding
40.0333	chr12	65970392	65970941	+	0.133333	NA	Intergenic	L2b|LINE|L2	53060	NR_106722	102464827		NR_106722	ENSG00000276878	MIR6074	hsa-mir-6074	microRNA 6074	ncRNA
39.5666-2	chr3	138730058	138730354	+	0.133333	NA	intron (NM_006219, intron 8 of 23)	intron (NM_006219, intron 8 of 23)	-22585	NM_001256045	5291	Hs.239818	NM_006219	ENSG00000051382	PIK3CB	P110BETA|PI3K|PI3KBETA|PIK3C1	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta	protein-coding
40.8666-4	chr7	90278030	90278516	+	0.133333	NA	intron (NM_001039706, intron 11 of 22)	MIRb|SINE|MIR	33099	NM_001160138	79846	Hs.521014	NM_024788	ENSG00000105792	CFAP69	C7orf63|FAP69|SPGF24	cilia and flagella associated protein 69	protein-coding
14.8666-4	chr7	26445898	26446024	+	0.133333	NA	intron (NR_148500, intron 2 of 5)	MIRb|SINE|MIR	-46543	NR_136272	105375304	Hs.735352	NR_136270	ENSG00000225792	LOC105375304	-	uncharacterized LOC105375304	ncRNA
44.7-4	chr18	22674133	22674613	+	0.133333	NA	Intergenic	Intergenic	112464	NR_110782	101927571	Hs.335020	NR_110782	ENSG00000266850	LOC101927571	-	uncharacterized LOC101927571	ncRNA
16.8667-11	chr4	62573664	62573858	+	0.133333	NA	Intergenic	Intergenic	-411996	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
32.7333-6	chr2	101358364	101358721	+	0.133333	NA	intron (NM_153836, intron 2 of 3)	L1ME3G|LINE|L1	28961	NM_153836	200407	Hs.732289	NM_153836	ENSG00000175874	CREG2	-	cellular repressor of E1A stimulated genes 2	protein-coding
36.9333-5	chr19	34402282	34402701	+	0.133333	NA	TTS (NM_001289790)	TTS (NM_001289790)	-1907	NM_001353433	84306	Hs.515344	NM_032346	ENSG00000126249	PDCD2L	-	programmed cell death 2 like	protein-coding
24.2666	chrX	92272280	92272693	+	0.133333	NA	intron (NM_032968, intron 4 of 6)	intron (NM_032968, intron 4 of 6)	437025	NM_001168363	27328	Hs.655673	NM_014522	ENSG00000102290	PCDH11X	PCDH-X|PCDH-Y|PCDH11|PCDH11Y|PCDH22|PCDHX|PPP1R119	protocadherin 11 X-linked	protein-coding
33.0666	chr10	31409964	31410463	+	0.133333	NA	intron (NM_001323646, intron 4 of 11)	L1PA7|LINE|L1	-10458	NM_001368169	100505502	Hs.730227	NM_001368169		LOC100505502	-	putative UPF0607 protein FLJ37424	protein-coding
34.5333-3	chr15	80080503	80081009	+	0.133333	NA	intron (NM_001242912, intron 2 of 6)	MSTA|LTR|ERVL-MaLR	8195	NM_001242916	54469	Hs.596679	NM_019006	ENSG00000086666	ZFAND6	AWP1|ZA20D3|ZFAND5B	zinc finger AN1-type containing 6	protein-coding
14.3333-5	chr2	25345085	25345225	+	0.133333	NA	Intergenic	Intergenic	-2565	NM_175629	1788	Hs.515840	NM_022552	ENSG00000119772	DNMT3A	DNMT3A2|M.HsaIIIA|TBRS	DNA methyltransferase 3 alpha	protein-coding
28.6666	chr1	42712763	42713253	+	0.133333	NA	Intergenic	L1MA4A|LINE|L1	27228	NM_148960	149461	Hs.496270	NM_148960	ENSG00000164007	CLDN19	HOMG5	claudin 19	protein-coding
31.3333-2	chr11	42288682	42289255	+	0.133333	NA	Intergenic	Intergenic	-35278	NR_038309	100507205	Hs.99310	NR_038309		LINC02740	-	long intergenic non-protein coding RNA 2740	ncRNA
20.0333-15	chr8	127377744	127377923	+	0.133333	NA	intron (NR_117099, intron 3 of 3)	MIR|SINE|MIR	-22566	NR_109834	101805488	Hs.745578	NR_109834	ENSG00000280997	CCAT2	LINC00873|NCCP1	colon cancer associated transcript 2	ncRNA
28.9333-2	chr1	176620320	176620767	+	0.133333	NA	intron (NM_021936, intron 3 of 4)	MER58A|DNA|hAT-Charlie	157368	NM_020318	60676	Hs.187284	NM_020318	ENSG00000116183	PAPPA2	PAPP-A2|PAPP-E|PAPPE|PLAC3	pappalysin 2	protein-coding
36.4666-4	chr8	136188039	136188319	+	0.133333	NA	Intergenic	Intergenic	-342619	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
47.2666-2	chr2	145076249	145076643	+	0.133333	NA	non-coding (NR_033870, exon 5 of 5)	non-coding (NR_033870, exon 5 of 5)	408479	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41	ncRNA
22.6-14	chr4	44646284	44646478	+	0.133333	NA	intron (NM_182592, intron 2 of 5)	intron (NM_182592, intron 2 of 5)	5260	NM_182592	285525	Hs.596000	NM_182592	ENSG00000177752	YIPF7	FinGER9	Yip1 domain family member 7	protein-coding
32.5-6	chr15	71908649	71909131	+	0.133333	NA	intron (NM_006901, intron 19 of 41)	L1MC2|LINE|L1	98336	NM_016346	10002	Hs.187354	NM_014249	ENSG00000278570	NR2E3	ESCS|PNR|RNR|RP37|rd7	nuclear receptor subfamily 2 group E member 3	protein-coding
18.9333-13	chr6	72193495	72193722	+	0.133333	NA	intron (NM_014989, intron 6 of 33)	intron (NM_014989, intron 6 of 33)	-19285	NM_001350432	22999	Hs.485729	NM_014989	ENSG00000079841	RIMS1	CORD7|RAB3IP2|RIM|RIM1	regulating synaptic membrane exocytosis 1	protein-coding
51.4333	chr10	8613433	8614098	+	0.133333	NA	Intergenic	Intergenic	-19374	NR_134492	105376398	Hs.63158	NR_134492		LOC105376398	-	uncharacterized LOC105376398	ncRNA
32.3999-5	chr9	99796650	99797159	+	0.133333	NA	intron (NR_109802, intron 2 of 6)	intron (NR_109802, intron 2 of 6)	22985	NR_109802	101928438	Hs.637767	NR_109802	ENSG00000237461	LOC101928438	-	uncharacterized LOC101928438	ncRNA
23.2333-11	chr8	134546745	134547056	+	0.133333	NA	intron (NM_020863, intron 11 of 15)	intron (NM_020863, intron 11 of 15)	-51171	NR_002438	594840	Hs.626298	NR_002438	ENSG00000248492	ZFAT-AS1	NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS	ZFAT antisense RNA 1	ncRNA
27.8-4	chr1	241020178	241020684	+	0.133333	NA	intron (NM_001350116, intron 3 of 16)	MLT1C|LTR|ERVL-MaLR	-111841	NR_036069	100422856		NR_036069	ENSG00000265831	MIR3123	mir-3123	microRNA 3123	ncRNA
40.6-4	chr3	58347540	58347905	+	0.133333	NA	intron (NM_001349498, intron 1 of 17)	L1ME1|LINE|L1	14416	NM_001349498	54899	Hs.190544	NM_017771	ENSG00000168297	PXK	MONAKA|SLOB	PX domain containing serine/threonine kinase like	protein-coding
30.7333-5	chr18	40870987	40871329	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	649519	NR_002838	641516	Hs.116612	NR_002838	ENSG00000267313	KC6	-	keratoconus gene 6	ncRNA
29.1-4	chr17	61515572	61516128	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	59362	NM_018488	9496	Hs.143907	NM_018488	ENSG00000121075	TBX4	ICPPS|SPS	T-box transcription factor 4	protein-coding
22.3333-6	chr12	16250696	16250998	+	0.133333	NA	intron (NM_001170798, intron 3 of 8)	L1M5|LINE|L1	26838	NM_001170798	729025	Hs.692712	NM_001170798	ENSG00000188991	SLC15A5	-	solute carrier family 15 member 5	protein-coding
21.6-8	chr20	2342087	2342367	+	0.133333	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-38674	NM_001254734	343641	Hs.452039	NM_198994	ENSG00000166948	TGM6	SCA35|TG6|TGM3L|TGY|dJ734P14.3	transglutaminase 6	protein-coding
53.5333	chr15	84840359	84841028	+	0.133333	NA	exon (NM_020778, exon 5 of 14)	exon (NM_020778, exon 5 of 14)	24013	NM_020778	57538	Hs.459183	NM_020778	ENSG00000136383	ALPK3	CMH27|MAK|MIDORI	alpha kinase 3	protein-coding
23.6-17	chr5	55669860	55670093	+	0.133333	NA	intron (NM_001282429, intron 3 of 14)	AluY|SINE|Alu	23077	NM_001258286	153129	Hs.742101	NM_173514	ENSG00000177058	SLC38A9	URLC11	solute carrier family 38 member 9	protein-coding
34.4	chr10	89168901	89169339	+	0.133333	NA	Intergenic	L2b|LINE|L2	38197	NM_003956	9023	Hs.47357	NM_003956	ENSG00000138135	CH25H	C25H	cholesterol 25-hydroxylase	protein-coding
24.5-3	chr12	17924027	17924248	+	0.133333	NA	Intergenic	L1PB4|LINE|L1	166056	NM_001286201	79785	Hs.732831	NM_024730	ENSG00000111404	RERGL	-	RERG like	protein-coding
32.3333-2	chr11	17886509	17886981	+	0.133333	NA	intron (NR_104041, intron 8 of 9)	intron (NR_104041, intron 8 of 9)	126302	NR_104040	26297	Hs.32470	NM_012139	ENSG00000129158	SERGEF	DELGEF|Gnefr	secretion regulating guanine nucleotide exchange factor	protein-coding
40.5333-7	chr3	106231182	106231754	+	0.133333	NA	Intergenic	Intergenic	-362067	NR_135810	868	Hs.430589	NM_170662	ENSG00000114423	CBLB	Cbl-b|Nbla00127|RNF56	Cbl proto-oncogene B	protein-coding
26.5-4	chr18	59509550	59509918	+	0.133333	NA	intron (NM_133459, intron 2 of 10)	intron (NM_133459, intron 2 of 10)	-150469	NM_005570	3998	Hs.465295	NM_005570	ENSG00000074695	LMAN1	ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58	lectin, mannose binding 1	protein-coding
31.3999	chr1	117659083	117659541	+	0.133333	NA	Intergenic	Intergenic	53264	NM_017709	54855	Hs.356216	NM_017709	ENSG00000183508	TENT5C	FAM46C	terminal nucleotidyltransferase 5C	protein-coding
19.4-9	chr16	75368934	75369171	+	0.133333	NA	intron (NM_006324, intron 5 of 6)	intron (NM_006324, intron 5 of 6)	64451	NM_006324	10428	Hs.461361	NM_006324	ENSG00000153774	CFDP1	BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97	craniofacial development protein 1	protein-coding
19.9333-5	chr11	95104957	95105139	+	0.133333	NA	intron (NM_015036, intron 1 of 1)	intron (NM_015036, intron 1 of 1)	15202	NM_015036	23052	Hs.167115	NM_015036	ENSG00000149218	ENDOD1	-	endonuclease domain containing 1	protein-coding
31.0333-3	chr14	53916908	53917377	+	0.133333	NA	Intergenic	Intergenic	31342	NR_049843	100847076		NR_049843	ENSG00000266431	MIR5580	-	microRNA 5580	ncRNA
42.4333	chr1	33991997	33992368	+	0.133333	NA	intron (NM_052896, intron 3 of 69)	L1ME3G|LINE|L1	123226	NR_038372	402779	Hs.666207	NR_038372	ENSG00000231163	CSMD2-AS1	-	CSMD2 antisense RNA 1	ncRNA
15.5333-9	chr7	34352762	34352907	+	0.133333	NA	intron (NR_033665, intron 3 of 3)	L1MC4a|LINE|L1	-305384	NM_001300933	387129	Hs.652373	NM_207172	ENSG00000187258	NPSR1	ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1	neuropeptide S receptor 1	protein-coding
13.9666	chr1	245887515	245887700	+	0.133333	NA	intron (NM_022743, intron 8 of 11)	intron (NM_022743, intron 8 of 11)	529805	NM_022743	64754	Hs.567571	NM_022743	ENSG00000185420	SMYD3	KMT3E|ZMYND1|ZNFN3A1|bA74P14.1	SET and MYND domain containing 3	protein-coding
25-17	chr9	12342420	12342773	+	0.133333	NA	Intergenic	Intergenic	-350789	NM_000550	7306	Hs.270279	NM_000550	ENSG00000107165	TYRP1	CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN	tyrosinase related protein 1	protein-coding
47.2667-3	chr3	124222097	124222733	+	0.133333	NA	intron (NM_001024660, intron 1 of 59)	intron (NM_001024660, intron 1 of 59)	89486	NR_049798	100847021		NR_049798	ENSG00000266383	MIR5002	-	microRNA 5002	ncRNA
22.1333-14	chr7	46988727	46988988	+	0.133333	NA	Intergenic	L1MC4a|LINE|L1	-291735	NR_134575	730338	Hs.640207	NR_134575	ENSG00000233539	LOC730338	-	uncharacterized LOC730338	ncRNA
42.9999-2	chr9	88494902	88495557	+	0.133333	NA	Intergenic	Intergenic	-39872	NM_001161625	158046	Hs.734507	NM_145283	ENSG00000130045	NXNL2	C9orf121|RDCVF2|RdCVF2L	nucleoredoxin like 2	protein-coding
15.0667-6	chr18	10899756	10899965	+	0.133333	NA	intron (NM_022068, intron 4 of 51)	intron (NM_022068, intron 4 of 51)	-140211	NR_106846	102466735		NR_106846	ENSG00000274838	MIR6788	hsa-mir-6788	microRNA 6788	ncRNA
23.3333-18	chr8	117135512	117135836	+	0.133333	NA	intron (NM_173851, intron 1 of 7)	intron (NM_173851, intron 1 of 7)	679	NM_173851	169026	Hs.532270	NM_173851	ENSG00000164756	SLC30A8	ZNT8|ZnT-8	solute carrier family 30 member 8	protein-coding
26.4667-8	chr5	149833695	149834033	+	0.133333	NA	intron (NM_001172698, intron 4 of 10)	MIR3|SINE|MIR	61924	NM_001172699	133522	Hs.483816	NM_133263	ENSG00000155846	PPARGC1B	ERRL1|PERC|PGC-1(beta)|PGC1B	PPARG coactivator 1 beta	protein-coding
12.2333-5	chr3	49748478	49748705	+	0.133333	NA	intron (NM_153273, intron 1 of 5)	intron (NM_153273, intron 1 of 5)	-24617	NM_013334	29925	Hs.567488	NM_013334	ENSG00000173540	GMPPB	LGMDR19|MDDGA14|MDDGB14|MDDGC14	GDP-mannose pyrophosphorylase B	protein-coding
16.2333-2	chr1	188925878	188926223	+	0.133333	NA	Intergenic	L1ME3A|LINE|L1	1482422	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
18.3-3	chr10	20027309	20027626	+	0.133333	NA	intron (NM_001282736, intron 2 of 12)	MSTD|LTR|ERVL-MaLR	211035	NM_032812	84898	Hs.99472	NM_032812	ENSG00000120594	PLXDC2	TEM7R	plexin domain containing 2	protein-coding
33.0666-2	chr10	32421094	32421416	+	0.133333	NA	Intergenic	AluSz|SINE|Alu	24801	NR_120660	101929431	Hs.639819	NR_120660		LOC101929431	-	uncharacterized LOC101929431	ncRNA
45.0333-4	chr8	139375580	139376010	+	0.133333	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	327328	NM_001282534	51305	Hs.493037	NM_001282534	ENSG00000169427	KCNK9	K2p9.1|KT3.2|TASK-3|TASK3	potassium two pore domain channel subfamily K member 9	protein-coding
22.9666-3	chr14	76054436	76054706	+	0.133333	NA	intron (NR_045664, intron 3 of 7)	MIR3|SINE|MIR	68808	NM_052873	112752	Hs.532626	NM_052873	ENSG00000119650	IFT43	C14orf179|CED3|RP81|SRTD18	intraflagellar transport 43	protein-coding
33.1333	chr12	2970571	2970989	+	0.133333	NA	intron (NM_201443, intron 1 of 10)	intron (NM_201443, intron 1 of 10)	10845	NM_201443	7004	Hs.94865	NM_003213	ENSG00000197905	TEAD4	EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B	TEA domain transcription factor 4	protein-coding
39.4-4	chr15	99175473	99175872	+	0.133333	NA	intron (NR_109947, intron 8 of 12)	intron (NR_109947, intron 8 of 12)	70592	NM_015286	23336	Hs.207106	NM_015286	ENSG00000182253	SYNM	DMN|SYN	synemin	protein-coding
37.5999	chr22	25665499	25665978	+	0.133333	NA	intron (NM_001362778, intron 4 of 19)	intron (NM_001362778, intron 4 of 19)	-76450	NM_032608	84700	Hs.417959	NM_032608	ENSG00000133454	MYO18B	KFS4	myosin XVIIIB	protein-coding
25.7333-5	chr13	86822954	86823437	+	0.133333	NA	Intergenic	L1M1|LINE|L1	-88725	NR_132371	106144533	Hs.525107	NR_132371		LINC00430	-	long intergenic non-protein coding RNA 430	ncRNA
40.8-3	chr21	45689179	45689721	+	0.133333	NA	intron (NM_001348238, intron 2 of 16)	L1ME2|LINE|L1	20576	NM_001348241	54039	Hs.474049	NM_020528	ENSG00000183570	PCBP3	ALPHA-CP3|PCBP3-OT1|PCBP3OT	poly(rC) binding protein 3	protein-coding
25.6666-3	chr10	99942714	99943039	+	0.133333	NA	intron (NR_024130, intron 2 of 4)	intron (NR_024130, intron 2 of 4)	-11969	NM_001318326	23268	Hs.500771	NM_015221	ENSG00000107554	DNMBP	ARHGEF36|CTRCT48|TUBA	dynamin binding protein	protein-coding
38.4-10	chr3	113386239	113386751	+	0.133333	NA	intron (NM_001164496, intron 15 of 34)	intron (NM_001164496, intron 15 of 34)	-17503	NR_046728	100874029	Hs.599665	NR_046728	ENSG00000243849	CFAP44-AS1	WDR52-AS1	CFAP44 antisense RNA 1	ncRNA
36.3-7	chr5	119382047	119382640	+	0.133333	NA	intron (NM_014350, intron 1 of 1)	L2c|LINE|L2	26324	NM_014350	25816	Hs.618488	NM_014350	ENSG00000145779	TNFAIP8	GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2	TNF alpha induced protein 8	protein-coding
20.9666-4	chr8	121014445	121014635	+	0.133333	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	-202494	NM_021021	6641	Hs.46701	NM_021021	ENSG00000172164	SNTB1	59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43	syntrophin beta 1	protein-coding
15.3-10	chr7	45102735	45103072	+	0.133333	NA	intron (NM_199122, intron 4 of 8)	intron (NM_199122, intron 4 of 8)	1579	NR_002919	654319	Hs.689711	NR_002919	ENSG00000206838	SNORA5A	ACA5|ACA5A/B/C	small nucleolar RNA, H/ACA box 5A	snoRNA
22.2-6	chr16	79134795	79134994	+	0.133333	NA	intron (NM_001291997, intron 7 of 7)	intron (NM_001291997, intron 7 of 7)	465843	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding
39.8-3	chr12	43106818	43107331	+	0.133333	NA	Intergenic	Intergenic	-48241	NR_146866	105369740	Hs.577746	NR_146866	ENSG00000258331	LINC02461	-	long intergenic non-protein coding RNA 2461	ncRNA
17.9666-2	chr2	47717557	47717873	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	-65367	NM_001281492	2956	Hs.445052	NM_000179	ENSG00000116062	MSH6	GTBP|GTMBP|HNPCC5|HSAP|p160	mutS homolog 6	protein-coding
30.4-2	chr14	36166307	36166689	+	0.133333	NA	intron (NR_049735, intron 1 of 3)	intron (NR_049735, intron 1 of 3)	10153	NR_049735	100886964	Hs.742592	NR_049735		PTCSC3	-	papillary thyroid carcinoma susceptibility candidate 3	ncRNA
20.1666-2	chr2	81255866	81256103	+	0.133333	NA	Intergenic	AluSc|SINE|Alu	210962	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
37.0667	chr1	36463983	36464451	+	0.133333	NA	exon (NM_031280, exon 1 of 8)	exon (NM_031280, exon 1 of 8)	167	NM_031280	64960	Hs.352839	NM_031280	ENSG00000116898	MRPS15	DC37|MPR-S15|RPMS15|S15mt	mitochondrial ribosomal protein S15	protein-coding
30.5-6	chr11	83360069	83360556	+	0.133333	NA	Intergenic	THE1C|LTR|ERVL-MaLR	-73905	NM_001286117	60492	Hs.368866	NM_021825	ENSG00000137500	CCDC90B	MDS011|MDS025	coiled-coil domain containing 90B	protein-coding
33.8-2	chr12	119179310	119179678	+	0.133333	NA	exon (NM_014365, exon 1 of 3)	exon (NM_014365, exon 1 of 3)	704	NM_014365	26353	Hs.400095	NM_014365	ENSG00000152137	HSPB8	CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22	heat shock protein family B (small) member 8	protein-coding
40.2666	chr15	76583897	76584288	+	0.133333	NA	intron (NR_148227, intron 22 of 32)	L1MA3|LINE|L1	-2555	NR_037464	100500855		NR_037464	ENSG00000266449	MIR3713	-	microRNA 3713	ncRNA
32-12	chr8	86889931	86890285	+	0.133333	NA	intron (NM_173538, intron 2 of 10)	L1MA7|LINE|L1	23693	NM_173538	168975	Hs.246284	NM_173538	ENSG00000176571	CNBD1	-	cyclic nucleotide binding domain containing 1	protein-coding
18.9	chr1	95490300	95490600	+	0.133333	NA	Intergenic	L2a|LINE|L2	15713	NR_033966	440594	Hs.514123	NR_033966	ENSG00000233907	LINC01761	-	long intergenic non-protein coding RNA 1761	ncRNA
28.9333-6	chr19	10473652	10474086	+	0.133333	NA	Intergenic	AluSz|SINE|Alu	20937	NM_006202	5141	Hs.89901	NM_006202	ENSG00000065989	PDE4A	DPDE2|PDE4|PDE46	phosphodiesterase 4A	protein-coding
30.7333-12	chr5	160570789	160571225	+	0.133333	NA	intron (NM_001366652, intron 23 of 24)	L1MEd|LINE|L1	85655	NR_029701	406938		NR_029701	ENSG00000283733	MIR146A	MIRN146|MIRN146A|miR-146a|miRNA146A	microRNA 146a	ncRNA
45.0666-2	chr2	159987313	159987886	+	0.133333	NA	intron (NM_001007267, intron 11 of 26)	intron (NM_001007267, intron 11 of 26)	75016	NM_007366	22925	Hs.410477	NM_007366	ENSG00000153246	PLA2R1	CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R	phospholipase A2 receptor 1	protein-coding
9.46666-2	chr4	28550372	28550571	+	0.133333	NA	Intergenic	Intergenic	-269111	NR_036237	100422937		NR_036237	ENSG00000283275	MIR4275	-	microRNA 4275	ncRNA
24.3-17	chr8	112035248	112035730	+	0.133333	NA	Intergenic	L1MA8|LINE|L1	-608004	NR_031745	100302225		NR_031745	ENSG00000238399	MIR2053	hsa-mir-2053	microRNA 2053	ncRNA
18.8333-19	chr7	77971157	77971304	+	0.133333	NA	Intergenic	L1ME1|LINE|L1	131100	NM_001127359	57157	Hs.203965	NM_020432	ENSG00000006576	PHTF2	-	putative homeodomain transcription factor 2	protein-coding
18.2333-9	chr3	179851618	179851827	+	0.133333	NA	intron (NM_001349408, intron 8 of 14)	intron (NM_001349408, intron 8 of 14)	-46472	NR_110059	101928790	Hs.667247	NR_110059	ENSG00000244302	PEX5L-AS2	-	PEX5L antisense RNA 2	ncRNA
34.6-2	chr10	43622860	43623282	+	0.133333	NA	Intergenic	L1MD|LINE|L1	-5746	NR_038867	414201	Hs.666576	NR_038867	ENSG00000223910	ZNF32-AS3	C10orf44|ZNF32-OT1|bA402L1.3	ZNF32 antisense RNA 3	ncRNA
17.9666-3	chr20	31794103	31794237	+	0.133333	NA	intron (NM_012112, intron 14 of 17)	MIRc|SINE|MIR	-25205	NM_033118	85366	Hs.86092	NM_033118	ENSG00000101306	MYLK2	KMLC|MLCK|MLCK2|skMLCK	myosin light chain kinase 2	protein-coding
28.3333	chr1	32450587	32450847	+	0.133333	NA	Intergenic	L1M4|LINE|L1	-14355	NM_001145720	728116	Hs.647658	NM_001145720	ENSG00000273274	ZBTB8B	ZNF916B	zinc finger and BTB domain containing 8B	protein-coding
41.9333	chr11	108394085	108394625	+	0.133333	NA	intron (NM_001330368, intron 4 of 6)	AluJr|SINE|Alu	73174	NM_001330368	160140	Hs.653180	NM_152587	ENSG00000166323	C11orf65	-	chromosome 11 open reading frame 65	protein-coding
41.1333-3	chr14	85856116	85856486	+	0.133333	NA	Intergenic	Intergenic	-78377	NR_110155	101928767	Hs.536380	NR_110155		LINC02328	-	long intergenic non-protein coding RNA 2328	ncRNA
16.8666-2	chr3	84931694	84931830	+	0.133333	NA	Intergenic	Intergenic	-27227	NM_001167674	253559	Hs.164578	NM_153184	ENSG00000175161	CADM2	IGSF4D|NECL3|Necl-3|SynCAM 2|synCAM2	cell adhesion molecule 2	protein-coding
45.2332	chr5	100753733	100754270	+	0.133333	NA	Intergenic	Intergenic	62564	NR_031686	100302288		NR_031686	ENSG00000221263	MIR548P	MIRN548P|hsa-mir-548p	microRNA 548p	ncRNA
19.4333-5	chr2	62329560	62329834	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	114176	NM_001319075	10678	Hs.173203	NM_006577	ENSG00000170340	B3GNT2	3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
27.1333-8	chr12	107936902	107937283	+	0.133333	NA	Intergenic	MamTip3|DNA|hAT-Tip100	-33321	NR_037629	728739	Hs.741995	NR_037629		LOC728739	-	programmed cell death 2 pseudogene	pseudo
61.9333-2	chr2	31656303	31657167	+	0.133333	NA	Intergenic	MLT1A1|LTR|ERVL-MaLR	-75797	NM_000348	6716	Hs.458345	NM_000348	ENSG00000277893	SRD5A2	-	steroid 5 alpha-reductase 2	protein-coding
23.0666-2	chr2	209842320	209842753	+	0.133333	NA	intron (NM_032504, intron 21 of 63)	intron (NM_032504, intron 21 of 63)	70543	NM_032504	285175	Hs.396201	NM_032504	ENSG00000144406	UNC80	C2orf21|UNC-80	unc-80 homolog, NALCN channel complex subunit	protein-coding
10.8	chr1	31983887	31984026	+	0.133333	NA	Intergenic	L1ME3|LINE|L1	-29912	NR_073498	10657	Hs.445893	NM_006559	ENSG00000121774	KHDRBS1	Sam68|p62|p68	KH RNA binding domain containing, signal transduction associated 1	protein-coding
21-7	chr4	16864044	16864434	+	0.133333	NA	intron (NM_001304435, intron 1 of 7)	intron (NM_001304435, intron 1 of 7)	34406	NM_001130834	9079	Hs.714330	NM_001290	ENSG00000169744	LDB2	CLIM1|LDB-2|LDB1	LIM domain binding 2	protein-coding
18.4666-2	chr12	53805649	53805857	+	0.133333	NA	Intergenic	Intergenic	-48719	NR_104332	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA
24.5333-15	chr7	50743769	50744018	+	0.133333	NA	intron (NM_001371008, intron 1 of 15)	intron (NM_001371008, intron 1 of 15)	-11540	NM_001001549	2887	Hs.164060	NM_005311	ENSG00000106070	GRB10	GRB-IR|Grb-10|IRBP|MEG1|RSS	growth factor receptor bound protein 10	protein-coding
35.2666-5	chr4	54729693	54730086	+	0.133333	NA	intron (NM_000222, intron 14 of 20)	intron (NM_000222, intron 14 of 20)	71961	NM_001093772	3815	Hs.479754	NM_000222	ENSG00000157404	KIT	C-Kit|CD117|MASTC|PBT|SCFR	KIT proto-oncogene, receptor tyrosine kinase	protein-coding
35.6333-5	chr8	143472845	143473566	+	0.133333	NA	intron (NM_015117, intron 5 of 11)	intron (NM_015117, intron 5 of 11)	33043	NR_145785	109623485		NR_145785		SNORD149	-	small nucleolar RNA, C/D box 149	snoRNA
32.4666-5	chr7	73790738	73791074	+	0.133333	NA	Intergenic	AluSq2|SINE|Alu	-20636	NM_001306	1365	Hs.647023	NM_001306	ENSG00000165215	CLDN3	C7orf1|CPE-R2|CPETR2|HRVP1|RVP1	claudin 3	protein-coding
25.9-9	chr4	189342616	189343067	+	0.133333	NA	Intergenic	Intergenic	-316765	NR_121679	101928971	Hs.519164	NR_121679	ENSG00000250739	LINC01262	TCONS_l2_00021807	long intergenic non-protein coding RNA 1262	ncRNA
25.3333	chr10	30536186	30536636	+	0.133333	NA	Intergenic	Intergenic	93342	NM_183058	119180	Hs.522610	NM_183058	ENSG00000151033	LYZL2	LYZD2	lysozyme like 2	protein-coding
32.5333-7	chr4	93847325	93847669	+	0.133333	NA	Intergenic	Intergenic	18744	NM_005172	474	Hs.532680	NM_005172	ENSG00000172238	ATOH1	ATH1|HATH1|MATH-1|bHLHa14	atonal bHLH transcription factor 1	protein-coding
28.4666-5	chr21	27687124	27687387	+	0.133333	NA	Intergenic	L1M4|LINE|L1	-35124	NR_024357	54088	Hs.570434	NR_024357	ENSG00000225298	LINC00113	C21orf23|NCRNA00113	long intergenic non-protein coding RNA 113	ncRNA
54.3999	chr2	134525851	134526368	+	0.133333	NA	intron (NM_030923, intron 4 of 7)	intron (NM_030923, intron 4 of 7)	192891	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding
35.5667-3	chr5	19973297	19973712	+	0.133333	NA	intron (NM_001349562, intron 2 of 13)	intron (NM_001349562, intron 2 of 13)	14696	NM_001349559	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
35.8667-3	chr3	10513360	10513911	+	0.133333	NA	intron (NM_001353564, intron 2 of 20)	intron (NM_001353564, intron 2 of 20)	-8049	NM_001683	491	Hs.268942	NM_001683	ENSG00000157087	ATP2B2	PMCA2|PMCA2a|PMCA2i	ATPase plasma membrane Ca2+ transporting 2	protein-coding
42.9-5	chr6	121387188	121387568	+	0.133333	NA	Intergenic	HAL1|LINE|L1	-48268	NM_000165	2697	Hs.74471	NM_000165	ENSG00000152661	GJA1	AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA	gap junction protein alpha 1	protein-coding
31.0666-2	chr5	40152128	40152434	+	0.133333	NA	Intergenic	Intergenic	99990	NR_104633	102467077	Hs.148993	NR_104633		LINC00603	-	long intergenic non-protein coding RNA 603	ncRNA
18.2667-15	chr4	154857169	154857390	+	0.133333	NA	Intergenic	HERV16-int|LTR|ERVL	75774	NM_001277173	166863	Hs.133095	NM_144979	ENSG00000151962	RBM46	CT68	RNA binding motif protein 46	protein-coding
11.3667-5	chr18	60835605	60835811	+	0.133333	NA	Intergenic	Intergenic	-462933	NM_005912	4160	Hs.532833	NM_005912	ENSG00000166603	MC4R	BMIQ20	melanocortin 4 receptor	protein-coding
46.3999	chr3	62137067	62137482	+	0.133333	NA	intron (NM_002841, intron 6 of 29)	intron (NM_002841, intron 6 of 29)	181673	NR_038283	100506994	Hs.656620	NR_038281	ENSG00000241472	PTPRG-AS1	-	PTPRG antisense RNA 1	ncRNA
36.4-4	chr12	39382069	39382512	+	0.133333	NA	intron (NM_001173464, intron 1 of 37)	intron (NM_001173464, intron 1 of 37)	60830	NM_017641	55605	Hs.374201	NM_017641	ENSG00000139116	KIF21A	CFEOM1|FEOM1|FEOM3A	kinesin family member 21A	protein-coding
25.2-16	chr4	148858377	148858641	+	0.133333	NA	Intergenic	L2c|LINE|L2	83869	NR_134681	105377480	Hs.148699	NR_134681	ENSG00000249317	LOC105377480	-	uncharacterized LOC105377480	ncRNA
22.7-5	chr20	49700059	49700499	+	0.133333	NA	intron (NM_004776, intron 1 of 8)	MER44B|DNA|TcMar-Tigger	13599	NM_004776	9334	Hs.370487	NM_004776	ENSG00000158470	B4GALT5	B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V	beta-1,4-galactosyltransferase 5	protein-coding
16.3333-7	chr16	4699372	4699599	+	0.133333	NA	intron (NR_040252, intron 10 of 16)	intron (NR_040252, intron 10 of 16)	5767	NM_001370586	84309	Hs.513315	NM_032349	ENSG00000168101	NUDT16L1	SDOS|TIRR	nudix hydrolase 16 like 1	protein-coding
40.2333-2	chr2	226889200	226889684	+	0.133333	NA	intron (NM_001349069, intron 5 of 8)	intron (NM_001349069, intron 5 of 8)	53388	NM_001167608	84236	Hs.471514	NM_032276	ENSG00000144468	RHBDD1	RHBDL4|RRP4	rhomboid domain containing 1	protein-coding
23.9666	chr10	63164799	63165114	+	0.133333	NA	Intergenic	Intergenic	31628	NM_030759	29982	Hs.449628	NM_030759	ENSG00000148572	NRBF2	COPR|COPR1|COPR2|NRBF-2	nuclear receptor binding factor 2	protein-coding
44.0333-2	chr2	23635023	23635737	+	0.133333	NA	intron (NM_052920, intron 3 of 13)	intron (NM_052920, intron 3 of 13)	250201	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding
27-19	chr4	51994966	51995318	+	0.133333	NA	exon (NM_001024611, exon 5 of 5)	exon (NM_001024611, exon 5 of 5)	25221	NM_001024611	339977	Hs.661450	NM_001024611	ENSG00000188993	LRRC66	-	leucine rich repeat containing 66	protein-coding
33.8666-3	chr5	17205637	17205995	+	0.133333	NA	intron (NR_027253, intron 1 of 2)	intron (NR_027253, intron 1 of 2)	-11007	NM_001271606	10409	Hs.201641	NM_006317	ENSG00000176788	BASP1	CAP-23|CAP23|NAP-22|NAP22	brain abundant membrane attached signal protein 1	protein-coding
49.4666-3	chr3	23516870	23517334	+	0.133333	NA	intron (NM_001370225, intron 4 of 5)	intron (NM_001370225, intron 4 of 5)	-288853	NM_182666	7324	Hs.164853	NM_003341	ENSG00000170142	UBE2E1	UBCH6	ubiquitin conjugating enzyme E2 E1	protein-coding
20.4666-2	chr16	63454506	63454810	+	0.133333	NA	Intergenic	Tigger4|DNA|TcMar-Tigger	-1418220	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
39.8-4	chr12	104082677	104083173	+	0.133333	NA	intron (NM_013320, intron 7 of 14)	intron (NM_013320, intron 7 of 14)	18394	NM_013320	29915	Hs.506558	NM_013320	ENSG00000111727	HCFC2	HCF-2|HCF2	host cell factor C2	protein-coding
24.6-8	chr3	113357804	113358170	+	0.133333	NA	intron (NM_001164496, intron 22 of 34)	L1ME3|LINE|L1	-46011	NR_046728	100874029	Hs.599665	NR_046728	ENSG00000243849	CFAP44-AS1	WDR52-AS1	CFAP44 antisense RNA 1	ncRNA
55.5333	chr14	46647953	46648770	+	0.133333	NA	Intergenic	Intergenic	3420	NM_080746	140801	Hs.308332	NM_080746	ENSG00000165496	RPL10L	RPL10_5_1358	ribosomal protein L10 like	protein-coding
45.9999	chr2	62010421	62011049	+	0.133333	NA	intron (NM_001321781, intron 2 of 2)	L2a|LINE|L2	105093	NM_152516	150684	Hs.468702	NM_152516	ENSG00000173163	COMMD1	C2orf5|MURR1	copper metabolism domain containing 1	protein-coding
34.0333-5	chr5	30035785	30036199	+	0.133333	NA	Intergenic	THE1C-int|LTR|ERVL-MaLR	155432	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
18.0666	chr12	39721954	39722282	+	0.133333	NA	TTS (NM_001031748)	TTS (NM_001031748)	95935	NM_001031748	283461	Hs.648205	NM_001031748	ENSG00000180116	C12orf40	HEL-206|HEL-S-94	chromosome 12 open reading frame 40	protein-coding
16.7333-18	chr7	20143273	20143519	+	0.133333	NA	intron (NR_046756, intron 1 of 3)	AluSc5|SINE|Alu	1480	NR_046756	100874041	Hs.145104	NR_046756	ENSG00000228598	MACC1-AS1	-	MACC1 antisense RNA 1	ncRNA
23.2667-5	chr12	39954135	39954475	+	0.133333	NA	intron (NM_052885, intron 3 of 9)	L1MEc|LINE|L1	151776	NM_052885	114134	Hs.558595	NM_052885	ENSG00000151229	SLC2A13	HMIT	solute carrier family 2 member 13	protein-coding
52.2332	chr20	54947597	54948050	+	0.133333	NA	Intergenic	Intergenic	472230	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
24.3333-5	chr16	88584866	88585298	+	0.133333	NA	intron (NM_001294340, intron 2 of 18)	intron (NM_001294340, intron 2 of 18)	14679	NM_001294340	124245	Hs.93670	NM_144604	ENSG00000158545	ZC3H18	NHN1	zinc finger CCCH-type containing 18	protein-coding
25.8-23	chr8	87344462	87344844	+	0.133333	NA	intron (NM_173538, intron 8 of 10)	intron (NM_173538, intron 8 of 10)	478238	NM_173538	168975	Hs.246284	NM_173538	ENSG00000176571	CNBD1	-	cyclic nucleotide binding domain containing 1	protein-coding
36.5666-2	chr17	79417950	79418479	+	0.133333	NA	intron (NM_001082575, intron 2 of 14)	L1MB3|LINE|L1	97934	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	RNA binding fox-1 homolog 3	protein-coding
49.1999-2	chr8	111795096	111795672	+	0.133333	NA	Intergenic	Intergenic	418745	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
60.0333	chr2	8173491	8174272	+	0.133333	NA	intron (NR_034135, intron 7 of 8)	L1M5|LINE|L1	154538	NR_034135	339789	Hs.565619	NR_034135	ENSG00000236790	LINC00299	C2orf46|NCRNA00299	long intergenic non-protein coding RNA 299	ncRNA
34-9	chr8	117434072	117434445	+	0.133333	NA	Intergenic	MLT1J-int|LTR|ERVL-MaLR	-86455	NM_001282986	90390	Hs.492612	NM_080651	ENSG00000164758	MED30	MED30S|THRAP6|TRAP25	mediator complex subunit 30	protein-coding
27.0999	chr20	50561350	50561712	+	0.133333	NA	intron (NM_002827, intron 2 of 9)	intron (NM_002827, intron 2 of 9)	-24255	NR_030375	693230		NR_030375	ENSG00000208018	MIR645	MIRN645|hsa-mir-645	microRNA 645	ncRNA
13.9666-2	chr11	29008935	29009039	+	0.133333	NA	Intergenic	L1PA15|LINE|L1	-531439	NR_107035	102466876		NR_107035	ENSG00000273912	MIR8068	hsa-mir-8068	microRNA 8068	ncRNA
17.6333-3	chr12	61786326	61786554	+	0.133333	NA	intron (NM_178539, intron 2 of 4)	L1MA6|LINE|L1	406399	NM_178539	338811	Hs.269745	NM_178539	ENSG00000198673	TAFA2	FAM19A2|TAFA-2	TAFA chemokine like family member 2	protein-coding
17.7333-3	chr12	124186341	124186577	+	0.133333	NA	intron (NM_001347902, intron 3 of 4)	intron (NM_001347902, intron 3 of 4)	-102705	NM_181709	144347	Hs.432901	NM_181709	ENSG00000178882	RFLNA	CFM2|FAM101A	refilin A	protein-coding
27.9333-3	chr10	32001039	32001336	+	0.133333	NA	Intergenic	HAL1|LINE|L1	55238	NM_004521	3799	Hs.327736	NM_004521	ENSG00000170759	KIF5B	HEL-S-61|KINH|KNS|KNS1|UKHC	kinesin family member 5B	protein-coding
11.8333-3	chr2	50089072	50089201	+	0.133333	NA	intron (NM_001330093, intron 19 of 22)	intron (NM_001330093, intron 19 of 22)	-114933	NM_001320157	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
38.4666-3	chr16	81948152	81948503	+	0.133333	NA	intron (NM_002661, intron 31 of 32)	intron (NM_002661, intron 31 of 32)	63143	NM_145168	93517	Hs.87779	NM_145168	ENSG00000184860	SDR42E1	HSPC105	short chain dehydrogenase/reductase family 42E, member 1	protein-coding
19-12	chr2	236372104	236372309	+	0.133333	NA	intron (NR_073043, intron 13 of 19)	MER75|DNA|PiggyBac	-107861	NM_212556	401036	Hs.639909	NM_212556	ENSG00000182177	ASB18	ASB-18	ankyrin repeat and SOCS box containing 18	protein-coding
34.3333-12	chrX	47198464	47198966	+	0.133333	NA	intron (NM_003334, intron 1 of 25)	MIR|SINE|MIR	4886	NM_003334	7317	Hs.533273	NM_003334	ENSG00000130985	UBA1	A1S9|A1S9T|A1ST|AMCX1|CFAP124|GXP1|POC20|SMAX2|UBA1A|UBE1|UBE1X	ubiquitin like modifier activating enzyme 1	protein-coding
23.1333-10	chr8	10845406	10845694	+	0.133333	NA	intron (NR_125432, intron 2 of 2)	HSMAR2|DNA|TcMar-Mariner	5524	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA
25.9666-2	chr3	85841442	85842028	+	0.133333	NA	intron (NM_001256502, intron 3 of 10)	intron (NM_001256502, intron 3 of 10)	-13685	NR_046752	100874037	Hs.570566	NR_046752	ENSG00000241648	CADM2-AS2	-	CADM2 antisense RNA 2	ncRNA
39.0333	chr11	35160861	35161462	+	0.133333	NA	intron (NM_001001389, intron 1 of 16)	intron (NM_001001389, intron 1 of 16)	-1789	NR_145794	109623487		NR_145794		SNORD164	-	small nucleolar RNA, C/D box 164	snoRNA
22.7666	chr11	15511058	15511575	+	0.133333	NA	Intergenic	L1ME2|LINE|L1	-132569	NM_001293172	102724957	Hs.512245	NM_001293172		LOC102724957	-	uncharacterized LOC102724957	protein-coding
32.3333-11	chr7	98853486	98853831	+	0.133333	NA	intron (NM_152913, intron 5 of 7)	intron (NM_152913, intron 5 of 7)	16356	NM_001134450	222865	Hs.270753	NM_152913	ENSG00000166448	TMEM130	-	transmembrane protein 130	protein-coding
25.0667-3	chr14	60504634	60504954	+	0.133333	NA	Intergenic	Intergenic	-4352	NM_007374	4990	Hs.194756	NM_007374	ENSG00000184302	SIX6	MCOPCT2|ODRMD|OPTX2|Six9	SIX homeobox 6	protein-coding
28.8666-6	chr6	46311506	46311795	+	0.133333	NA	intron (NR_125838, intron 2 of 3)	intron (NR_125838, intron 2 of 3)	14242	NM_005822	10231	Hs.440168	NM_005822	ENSG00000172348	RCAN2	CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4	regulator of calcineurin 2	protein-coding
39.2-10	chr8	139904810	139905240	+	0.133333	NA	intron (NM_001160372, intron 20 of 22)	intron (NM_001160372, intron 20 of 22)	195510	NR_144431	359809	Hs.26814	NR_144431	ENSG00000282164	PEG13	-	paternally expressed 13	ncRNA
25.6333-9	chr3	42349957	42350163	+	0.133333	NA	Intergenic	Intergenic	60550	NM_144634	131375	Hs.234895	NM_144634	ENSG00000157093	LYZL4	LYC4|LYZA	lysozyme like 4	protein-coding
15.1667-9	chr7	6575100	6575275	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-2247	NM_001134387	55146	Hs.5268	NM_018106	ENSG00000136247	ZDHHC4	ZNF374	zinc finger DHHC-type containing 4	protein-coding
31.4-5	chr14	88656839	88657168	+	0.133333	NA	intron (NM_183387, intron 27 of 42)	AluJo|SINE|Alu	62583	NM_207662	79882	Hs.684046	NM_024824	ENSG00000100722	ZC3H14	MRT56|MSUT-2|NY-REN-37|SUT2|UKp68	zinc finger CCCH-type containing 14	protein-coding
19.4-8	chr16	13899350	13899527	+	0.133333	NA	Intergenic	AluSz|SINE|Alu	-20719	NM_005236	2072	Hs.567265	NM_005236	ENSG00000175595	ERCC4	ERCC11|FANCQ|RAD1|XFEPS|XPF	ERCC excision repair 4, endonuclease catalytic subunit	protein-coding
36.0333-4	chr3	95434196	95434531	+	0.133333	NA	Intergenic	Intergenic	248830	NR_077228	100287639	Hs.591320	NR_077228	ENSG00000244681	MTHFD2P1	-	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1	pseudo
27.1999	chr1	221606625	221606868	+	0.133333	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	130154	NR_111939	11221	Hs.497822	NM_007207	ENSG00000143507	DUSP10	MKP-5|MKP5	dual specificity phosphatase 10	protein-coding
26.5333-5	chr2	135501577	135501864	+	0.133333	NA	intron (NM_001286569, intron 2 of 21)	L1MC4|LINE|L1	28865	NM_001286568	84083	Hs.658422	NM_032143	ENSG00000121988	ZRANB3	4933425L19Rik|AH2	zinc finger RANBP2-type containing 3	protein-coding
25.4-14	chr3	94741653	94742060	+	0.133333	NA	Intergenic	L2a|LINE|L2	-196407	NR_015400	255025	Hs.130994	NR_015400	ENSG00000239589	LINC00879	-	long intergenic non-protein coding RNA 879	ncRNA
43.7-2	chr3	172150398	172150930	+	0.133333	NA	intron (NM_001135095, intron 3 of 25)	MER104|DNA|TcMar-Tc2	110133	NM_001135095	64778	Hs.744888	NM_022763	ENSG00000075420	FNDC3B	FAD104|PRO4979|YVTM2421	fibronectin type III domain containing 3B	protein-coding
28.9666-2	chr18	5617579	5618203	+	0.133333	NA	intron (NM_001281535, intron 1 of 21)	intron (NM_001281535, intron 1 of 21)	11100	NM_001281535	23136	Hs.213394	NM_012307	ENSG00000082397	EPB41L3	4.1B|DAL-1|DAL1	erythrocyte membrane protein band 4.1 like 3	protein-coding
45.7	chr1	71207733	71208412	+	0.133333	NA	intron (NR_046217, intron 2 of 3)	intron (NR_046217, intron 2 of 3)	126748	NR_046217	100852410	Hs.535534	NR_046217	ENSG00000229956	ZRANB2-AS2	-	ZRANB2 antisense RNA 2 (head to head)	ncRNA
25.1-2	chr17	11596559	11597011	+	0.133333	NA	Intergenic	MamTip1|DNA|hAT-Tip100	-1685	NM_001372	1770	Hs.567259	NM_001372	ENSG00000007174	DNAH9	CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20	dynein axonemal heavy chain 9	protein-coding
21.3999	chr2	173573313	173573507	+	0.133333	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	218538	NM_031942	83879	Hs.470654	NM_031942	ENSG00000144354	CDCA7	ICF3|JPO1	cell division cycle associated 7	protein-coding
25.5667-2	chr10	25633213	25633490	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	-18361	NR_108067	101929052	Hs.128298	NR_108067	ENSG00000280809	LINC00836	-	long intergenic non-protein coding RNA 836	ncRNA
35.3999	chr3	190565437	190565809	+	0.133333	NA	intron (NR_157352, intron 3 of 10)	intron (NR_157352, intron 3 of 10)	51538	NM_001364881	3556	Hs.478673	NM_002182	ENSG00000196083	IL1RAP	C3orf13|IL-1RAcP|IL1R3	interleukin 1 receptor accessory protein	protein-coding
27.9333-6	chr21	24352434	24352784	+	0.133333	NA	Intergenic	MER6A|DNA|TcMar-Tigger	-31232	NR_109963	101927869	Hs.555591	NR_109963	ENSG00000224832	LINC01689	-	long intergenic non-protein coding RNA 1689	ncRNA
16.4666	chr11	73741449	73741615	+	0.133333	NA	intron (NM_198896, intron 1 of 7)	L1MC1|LINE|L1	18561	NM_001243719	5870	Hs.503222	NM_002869	ENSG00000175582	RAB6A	RAB6	RAB6A, member RAS oncogene family	protein-coding
24-3	chr13	54077140	54077473	+	0.133333	NA	Intergenic	AluSx3|SINE|Alu	55565	NR_108063	100507428	Hs.351262	NR_108062	ENSG00000234787	LINC00458	LncRNA-ES3	long intergenic non-protein coding RNA 458	ncRNA
43.3666	chr10	32548445	32548876	+	0.133333	NA	intron (NR_109826, intron 13 of 16)	L1PB1|LINE|L1	102520	NR_109826	79741	Hs.585464	NM_024688	ENSG00000216937	CCDC7	BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68	coiled-coil domain containing 7	protein-coding
42.0332	chr19	3196678	3197085	+	0.133333	NA	intron (NM_020170, intron 4 of 14)	MER76|LTR|ERVL	10951	NM_020170	56926	Hs.657032	NM_020170	ENSG00000125912	NCLN	NET59	nicalin	protein-coding
30.8333-2	chr14	66465266	66465794	+	0.133333	NA	Intergenic	MER4A1|LTR|ERV1	-20841	NR_024338	440184	Hs.412138	NM_001004331	ENSG00000196553	CCDC196	C14orf53|LINC00238|NCRNA00238	coiled-coil domain containing 196	protein-coding
29.9333-11	chr5	126804420	126804866	+	0.133333	NA	intron (NR_134488, intron 1 of 11)	intron (NR_134488, intron 1 of 11)	27507	NM_005573	4001	Hs.89497	NM_005573	ENSG00000113368	LMNB1	ADLD|LMN|LMN2|LMNB	lamin B1	protein-coding
28.5999	chr7	5769597	5769965	+	0.133333	NA	intron (NM_207111, intron 1 of 16)	AluSz|SINE|Alu	11882	NM_207111	54476	Hs.487458	NM_019011	ENSG00000011275	RNF216	CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN	ring finger protein 216	protein-coding
33.4666	chr1	74731061	74731475	+	0.133333	NA	intron (NM_001130042, intron 1 of 9)	intron (NM_001130042, intron 1 of 9)	1782	NM_001889	1429	Hs.83114	NM_001889	ENSG00000116791	CRYZ	-	crystallin zeta	protein-coding
49.4332	chr1	247014878	247015457	+	0.133333	NA	intron (NR_037894, intron 1 of 6)	intron (NR_037894, intron 1 of 6)	-7110	NR_037892	57116	Hs.669893	NM_020394	ENSG00000197472	ZNF695	SBZF3	zinc finger protein 695	protein-coding
23.1999	chr11	16363485	16363733	+	0.133333	NA	intron (NM_001367872, intron 3 of 16)	intron (NM_001367872, intron 3 of 16)	-7063	NM_001367873	55553	Hs.368226	NM_017508	ENSG00000110693	SOX6	HSSOX6|SOXD	SRY-box transcription factor 6	protein-coding
30.9-9	chr5	89825491	89825768	+	0.133333	NA	Intergenic	MLT1E1|LTR|ERVL-MaLR	191091	NR_037433	100500825		NR_037433	ENSG00000264342	MIR3660	mir-3660	microRNA 3660	ncRNA
22.6333-3	chr10	98296863	98297115	+	0.133333	NA	Intergenic	Intergenic	-28795	NM_032211	84171	Hs.306814	NM_032211	ENSG00000138131	LOXL4	LOXC	lysyl oxidase like 4	protein-coding
14.8666-2	chr22	39716306	39716426	+	0.133333	NA	Intergenic	Intergenic	145613	NM_021096	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding
21.7333-4	chr12	57485826	57486120	+	0.133333	NA	intron (NM_001319850, intron 1 of 20)	MLT1H1|LTR|ERVL-MaLR	-2095	NM_004990	4141	Hs.632707	NM_004990	ENSG00000166986	MARS	CMT2U|ILFS2|ILLD|METRS|MRS|MTRNS|SPG70	methionyl-tRNA synthetase	protein-coding
31.1666	chr13	37375309	37375718	+	0.133333	NA	Intergenic	Intergenic	109271	NR_125762	103695431	Hs.550637	NR_125762	ENSG00000230390	LINC01048	-	long intergenic non-protein coding RNA 1048	ncRNA
19.3333-7	chr2	68920638	68920837	+	0.133333	NA	Intergenic	Intergenic	32156	NM_182536	200504	Hs.16757	NM_182536	ENSG00000183607	GKN2	BRICD1B|GDDR|PRO813|TFIZ1|VLTI465	gastrokine 2	protein-coding
23.6666	chr16	23273422	23273689	+	0.133333	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-28747	NM_000336	6338	Hs.414614	NM_000336	ENSG00000168447	SCNN1B	BESC1|ENaCb|ENaCbeta|LIDLS1|SCNEB	sodium channel epithelial 1 beta subunit	protein-coding
23.5666-4	chr6	62825315	62825630	+	0.133333	NA	Intergenic	MER4A1_|LTR|ERV1	494505	NM_001143940	51557	Hs.149585	NM_016571	ENSG00000146166	LGSN	GLULD1|LGS	lengsin, lens protein with glutamine synthetase domain	protein-coding
15.9333-10	chr3	4761836	4761976	+	0.133333	NA	intron (NM_001168272, intron 43 of 60)	intron (NM_001168272, intron 43 of 60)	-10316	NR_004428	100126791	Hs.663059	NR_004428	ENSG00000235947	EGOT	EGO|NCRNA00190	eosinophil granule ontogeny transcript	ncRNA
29.5666	chr16	65533200	65533616	+	0.133333	NA	intron (NR_027755, intron 2 of 8)	intron (NR_027755, intron 2 of 8)	42892	NR_027755	283867	Hs.444774	NM_001101346	ENSG00000261742	LINC00922	-	long intergenic non-protein coding RNA 922	ncRNA
41.6666	chr2	104099672	104100093	+	0.133333	NA	Intergenic	Intergenic	308450	NR_037885	100287010	Hs.694603	NR_037885		LOC100287010	-	uncharacterized LOC100287010	ncRNA
18.4-4	chr19	29691067	29691317	+	0.133333	NA	Intergenic	MLT1A|LTR|ERVL-MaLR	23864	NM_001031726	83636	Hs.529094	NM_031448	ENSG00000131943	C19orf12	MPAN|NBIA3|NBIA4|SPG43	chromosome 19 open reading frame 12	protein-coding
22.0666-6	chr8	127489749	127489989	+	0.133333	NA	Intergenic	Intergenic	-7730	NR_024393	727677	Hs.673248	NR_024393	ENSG00000246228	CASC8	CARLO1|CARLo-1|LINC00860	cancer susceptibility 8	ncRNA
29.9333-2	chr11	41902544	41902858	+	0.133333	NA	Intergenic	MER66-int|LTR|ERV1	182757	NR_135065	101928591	Hs.149771	NR_135065		LINC02745	-	long intergenic non-protein coding RNA 2745	ncRNA
22.9-14	chr7	2848801	2849008	+	0.133333	NA	Intergenic	Intergenic	-4596	NM_001293092	2768	Hs.487341	NM_007353	ENSG00000146535	GNA12	NNX3|RMP|gep	G protein subunit alpha 12	protein-coding
20.9-13	chr20	33603580	33603901	+	0.133333	NA	intron (NM_005093, intron 2 of 11)	intron (NM_005093, intron 2 of 11)	41375	NM_005093	9139	Hs.153934	NM_005093	ENSG00000078699	CBFA2T2	EHT|MTGR1|ZMYND3|p85	CBFA2/RUNX1 partner transcriptional co-repressor 2	protein-coding
32.0666-3	chr7	47036591	47036976	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-339661	NR_134575	730338	Hs.640207	NR_134575	ENSG00000233539	LOC730338	-	uncharacterized LOC730338	ncRNA
45.0666	chr18	1579357	1579893	+	0.133333	NA	Intergenic	Intergenic	-219996	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
20.7333-18	chr7	44842672	44842974	+	0.133333	NA	intron (NM_201436, intron 1 of 3)	intron (NM_201436, intron 1 of 3)	5303	NM_201436	94239	Hs.488189	NM_012412	ENSG00000105968	H2AFV	H2A.Z-2|H2AV	H2A histone family member V	protein-coding
25-14	chr8	59731093	59731396	+	0.133333	NA	Intergenic	Tigger2|DNA|TcMar-Tigger	550156	NM_001321837	767	Hs.654388	NM_004056	ENSG00000178538	CA8	CA-RP|CA-VIII|CALS|CAMRQ3|CARP	carbonic anhydrase 8	protein-coding
18.8666	chr14	80144058	80144394	+	0.133333	NA	Intergenic	Intergenic	-67193	NR_038355	100628307	Hs.623865	NR_038355	ENSG00000258766	DIO2-AS1	-	DIO2 antisense RNA 1	ncRNA
20.3-4	chr15	63517893	63518225	+	0.133333	NA	intron (NM_001256702, intron 1 of 13)	intron (NM_001256702, intron 1 of 13)	13466	NM_006537	9960	Hs.458499	NM_006537	ENSG00000140455	USP3	SIH003|UBP	ubiquitin specific peptidase 3	protein-coding
26.0999	chr11	120009522	120009717	+	0.133333	NA	Intergenic	Intergenic	119234	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding
34.2666-4	chr7	49901522	49902137	+	0.133333	NA	intron (NR_136188, intron 2 of 3)	L1MD2|LINE|L1	126496	NR_136188	375567	Hs.629302	NM_198570	ENSG00000188730	VWC2	PSST739|UNQ739	von Willebrand factor C domain containing 2	protein-coding
26.2-7	chr14	49283344	49283925	+	0.133333	NA	Intergenic	Charlie7|DNA|hAT-Charlie	302746	NM_001030001	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29|uS14	ribosomal protein S29	protein-coding
50.6667-2	chr8	83796447	83797113	+	0.133333	NA	Intergenic	L1MA3|LINE|L1	-386007	NM_001354325	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
27.9333-2	chr1	55475192	55475527	+	0.133333	NA	Intergenic	Intergenic	249718	NR_039618	100616272		NR_039618	ENSG00000265822	MIR4422	mir-4422	microRNA 4422	ncRNA
32.8-4	chr15	78336944	78337417	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-3173	NM_004378	1381	Hs.346950	NM_004378	ENSG00000166426	CRABP1	CRABP|CRABP-I|CRABPI|RBP5	cellular retinoic acid binding protein 1	protein-coding
47.1333	chr11	39237236	39237912	+	0.133333	NA	Intergenic	Intergenic	588716	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
40.8-10	chrX	71363699	71364094	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-2343	NR_104394	6872	Hs.158560	NM_004606	ENSG00000147133	TAF1	BA2R|CCG1|CCGS|DYT3|DYT3/TAF1|KAT4|MRXS33|N-TAF1|NSCL2|OF|P250|TAF(II)250|TAF2A|TAFII-250|TAFII250|XDP	TATA-box binding protein associated factor 1	protein-coding
15.8333-7	chr13	64431247	64431604	+	0.133333	NA	Intergenic	Intergenic	-355414	NR_145420	144766	Hs.719557	NR_145420	ENSG00000227674	LINC00355	-	long intergenic non-protein coding RNA 355	ncRNA
20-3	chr15	90009123	90009418	+	0.133333	NA	intron (NM_198526, intron 1 of 4)	intron (NM_198526, intron 1 of 4)	2515	NR_036135	100422841		NR_036135	ENSG00000265871	MIR3174	-	microRNA 3174	ncRNA
38.6-12	chr9	104497318	104497763	+	0.133333	NA	Intergenic	Intergenic	-6723	NM_001004485	138805	Hs.553602	NM_001004485	ENSG00000186881	OR13F1	OR9-6	olfactory receptor family 13 subfamily F member 1	protein-coding
46.4666	chr2	98093369	98094045	+	0.133333	NA	intron (NR_144297, intron 2 of 18)	L1MA8|LINE|L1	6540	NR_144296	200403	Hs.269977	NM_144992	ENSG00000168658	VWA3B	SCAR22	von Willebrand factor A domain containing 3B	protein-coding
25.5333-2	chr12	63309380	63309679	+	0.133333	NA	Intergenic	Intergenic	-156719	NM_000706	552	Hs.2131	NM_000706	ENSG00000166148	AVPR1A	AVPR V1a|AVPR1|V1aR	arginine vasopressin receptor 1A	protein-coding
25.7333	chr1	90128773	90129002	+	0.133333	NA	Intergenic	Intergenic	133777	NM_181781	284695	Hs.306221	NM_181781	ENSG00000162664	ZNF326	ZAN75|ZIRD|Zfp326|dJ871E2.1	zinc finger protein 326	protein-coding
31.2666-8	chr7	32508913	32509232	+	0.133333	NA	intron (NM_015060, intron 1 of 15)	intron (NM_015060, intron 1 of 15)	13583	NM_015060	23080	Hs.128056	NM_015060	ENSG00000105778	AVL9	KIAA0241	AVL9 cell migration associated	protein-coding
22.3333-12	chr3	53078451	53078652	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-32478	NM_016329	51460	Hs.343679	NM_016329	ENSG00000163935	SFMBT1	RU1|SFMBT|hSFMBT	Scm like with four mbt domains 1	protein-coding
20-6	chr2	141089709	141090068	+	0.133333	NA	intron (NM_018557, intron 7 of 90)	LTR16C|LTR|ERVL	-503203	NR_106979	102465692		NR_106979	ENSG00000283506	MIR7157	hsa-mir-7157	microRNA 7157	ncRNA
30.4666	chr2	229912660	229912976	+	0.133333	NA	intron (NM_001348325, intron 1 of 42)	intron (NM_001348325, intron 1 of 42)	8861	NM_001348334	9320	Hs.572642	NM_004238	ENSG00000153827	TRIP12	MRD49|TRIP-12|ULF	thyroid hormone receptor interactor 12	protein-coding
20.9-2	chr11	112920666	112921052	+	0.133333	NA	Intergenic	Intergenic	-40561	NM_181351	4684	Hs.503878	NM_000615	ENSG00000149294	NCAM1	CD56|MSK39|NCAM	neural cell adhesion molecule 1	protein-coding
33.5999	chr3	105331941	105332345	+	0.133333	NA	Intergenic	L1MA6|LINE|L1	-34570	NM_001243281	214	Hs.591293	NM_001627	ENSG00000170017	ALCAM	CD166|MEMD	activated leukocyte cell adhesion molecule	protein-coding
17.2-14	chr9	120998950	120999187	+	0.133333	NA	TTS (NM_001317164)	TTS (NM_001317164)	-46237	NR_148450	110599590		NR_148450		C5-OT1	C5T1LNCRNA	C5 3' UTR overlapping transcript 1	ncRNA
18.8333-4	chr11	114468419	114468732	+	0.133333	NA	Intergenic	MER20|DNA|hAT-Charlie	29108	NM_015523	25996	Hs.677190	NM_015523	ENSG00000076043	REXO2	CGI-114|REX2|RFN|SFN	RNA exonuclease 2	protein-coding
30.9666-3	chr14	84528206	84528573	+	0.133333	NA	Intergenic	Intergenic	-743543	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
45.1999	chr2	182011328	182011768	+	0.133333	NA	intron (NM_001261425, intron 2 of 5)	L1MA3|LINE|L1	25695	NM_001261425	151242	Hs.10941	NM_001080545	ENSG00000150722	PPP1R1C	IPP5	protein phosphatase 1 regulatory inhibitor subunit 1C	protein-coding
18.1666-2	chr1	235892511	235892713	+	0.133333	NA	Intergenic	Intergenic	-8899	NR_102436	1130	Hs.532411	NM_000081	ENSG00000143669	LYST	CHS|CHS1	lysosomal trafficking regulator	protein-coding
20.4-15	chr7	35624809	35624974	+	0.133333	NA	Intergenic	Intergenic	70244	NM_022373	64224	Hs.643051	NM_022373	ENSG00000122557	HERPUD2	-	HERPUD family member 2	protein-coding
8.33331	chr15	27227940	27228002	+	0.133333	NA	intron (NM_001270873, intron 3 of 5)	intron (NM_001270873, intron 3 of 5)	-66652	NR_120343	101928869	Hs.585699	NR_120343	ENSG00000228740	GABRG3-AS1	-	GABRG3 antisense RNA 1	ncRNA
16.7333-8	chr2	62501036	62501253	+	0.133333	NA	3' UTR (NM_198276, exon 4 of 4)	3' UTR (NM_198276, exon 4 of 4)	5051	NM_198276	200728	Hs.308028	NM_198276	ENSG00000186889	TMEM17	-	transmembrane protein 17	protein-coding
16.7333-6	chr17	71078862	71079195	+	0.133333	NA	Intergenic	Intergenic	123151	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility 17	ncRNA
44.5333-3	chr15	97377827	97378309	+	0.133333	NA	intron (NR_120324, intron 4 of 4)	Helitron1Na_Mam|RC|Helitron	143743	NR_120324	101927286	Hs.611279	NR_120324	ENSG00000259664	LINC02254	-	long intergenic non-protein coding RNA 2254	ncRNA
37.1333-5	chr2	44883931	44884350	+	0.133333	NA	Intergenic	Intergenic	54748	NR_147194	107985879	Hs.436392	NR_147194	ENSG00000259439	LINC01833	K21.1|RP11-89	long intergenic non-protein coding RNA 1833	ncRNA
18.3333-12	chr5	13632770	13632959	+	0.133333	NA	Intergenic	LTR33A|LTR|ERVL	311616	NM_001369	1767	Hs.212360	NM_001369	ENSG00000039139	DNAH5	CILD3|DNAHC5|HL1|KTGNR|PCD	dynein axonemal heavy chain 5	protein-coding
25.9333-2	chr14	24821073	24821432	+	0.133333	NA	intron (NM_001351943, intron 5 of 6)	intron (NM_001351943, intron 5 of 6)	-187062	NR_144343	3002	Hs.1051	NM_004131	ENSG00000100453	GZMB	C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT	granzyme B	protein-coding
17.8-11	chr2	191759245	191759393	+	0.133333	NA	Intergenic	Intergenic	-33521	NR_157850	729254		NR_157850		LOC729254	-	hCG2045843	ncRNA
33.9333-6	chr9	36187898	36188340	+	0.133333	NA	Intergenic	Intergenic	-2737	NM_001184762	1211	Hs.522114	NM_001833	ENSG00000122705	CLTA	LCA	clathrin light chain A	protein-coding
22.6-19	chr6	156502351	156502684	+	0.133333	NA	Intergenic	Intergenic	123767	NR_145751	109617011		NR_145751	ENSG00000212295	SNORD28B	-	small nucleolar RNA, C/D box 28B	snoRNA
27.0333-11	chr7	49975563	49975966	+	0.133333	NA	intron (NM_001159878, intron 7 of 7)	intron (NM_001159878, intron 7 of 7)	117482	NM_007009	11055	Hs.388841	NM_007009	ENSG00000042813	ZPBP	ZPBP1	zona pellucida binding protein	protein-coding
47.8332	chr13	99382970	99383387	+	0.133333	NA	intron (NR_026644, intron 8 of 8)	intron (NR_026644, intron 8 of 8)	27047	NR_030353	693208		NR_030353	ENSG00000207719	MIR623	MIRN623|hsa-mir-623	microRNA 623	ncRNA
50.9333	chr4	164664581	164665079	+	0.133333	NA	Intergenic	L1ME3Cz|LINE|L1	-89301	NM_001352885	100505989	Hs.328236	NM_001352885	ENSG00000248771	SMIM31	LINC01207	small integral membrane protein 31	protein-coding
27.4333-12	chr8	142430405	142430852	+	0.133333	NA	Intergenic	Intergenic	-19021	NM_001702	575	Hs.194654	NM_001702	ENSG00000181790	ADGRB1	BAI1|GDAIF	adhesion G protein-coupled receptor B1	protein-coding
14.2333-6	chr12	50321019	50321171	+	0.133333	NA	Intergenic	AluSp|SINE|Alu	-37575	NM_016357	51474	Hs.525419	NM_016357	ENSG00000050405	LIMA1	EPLIN|LDLCQ8|SREBP3	LIM domain and actin binding 1	protein-coding
25.4-7	chr17	27463060	27463359	+	0.133333	NA	intron (NM_001367810, intron 1 of 18)	intron (NM_001367810, intron 1 of 18)	6761	NM_001367810	8844	Hs.133534	NM_014238	ENSG00000141068	KSR1	KSR|RSU2	kinase suppressor of ras 1	protein-coding
33.1999	chr4	90860113	90860671	+	0.133333	NA	intron (NM_001145065, intron 8 of 10)	L1MB7|LINE|L1	625361	NM_207491	401145	Hs.654735	NM_207491	ENSG00000184305	CCSER1	FAM190A	coiled-coil serine rich protein 1	protein-coding
26.9333-13	chr2	178124842	178125193	+	0.133333	NA	intron (NM_001365578, intron 8 of 9)	intron (NM_001365578, intron 8 of 9)	12580	NM_001365578	129831	Hs.377257	NM_152945	ENSG00000155636	RBM45	DRB1|RB-1	RNA binding motif protein 45	protein-coding
38.9999	chr3	100755851	100756216	+	0.133333	NA	intron (NM_001349332, intron 31 of 35)	intron (NM_001349332, intron 31 of 35)	46491	NM_001195478	10342	Hs.518123	NM_006070	ENSG00000114354	TFG	HMSNP|SPG57|TF6|TRKT3	trafficking from ER to golgi regulator	protein-coding
27.1333-7	chr12	48988796	48989261	+	0.133333	NA	Intergenic	L2c|LINE|L2	-9319	NR_147179	105369758	Hs.120228	NR_147178	ENSG00000257913	DDN-AS1	CAT1507	DDN and PRKAG1 antisense RNA 1	ncRNA
15.4666	chr10	89845636	89845780	+	0.133333	NA	Intergenic	Intergenic	-8198	NR_149080	105378425	Hs.559891	NR_149079	ENSG00000280560	LINC01374	TCONS_00018278	long intergenic non-protein coding RNA 1374	ncRNA
30.2999	chr10	114340558	114340938	+	0.133333	NA	intron (NM_001001936, intron 1 of 18)	intron (NM_001001936, intron 1 of 18)	63754	NM_001001936	84632	Hs.501106	NM_032550	ENSG00000169129	AFAP1L2	CTB-1144G6.4|KIAA1914|XB130	actin filament associated protein 1 like 2	protein-coding
20.1999	chr6	160515277	160515428	+	0.133333	NA	Intergenic	L1PA7|LINE|L1	-4228	NR_028092	80350	Hs.654503	NM_024492	ENSG00000213071	LPAL2	APOA2|APOAL|APOARGC|apo(a)rg-C	lipoprotein(a) like 2, pseudogene	pseudo
32-3	chr11	71209770	71210176	+	0.133333	NA	intron (NM_012309, intron 1 of 24)	intron (NM_012309, intron 1 of 24)	14823	NM_012309	22941	Hs.268726	NM_012309	ENSG00000162105	SHANK2	AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3	SH3 and multiple ankyrin repeat domains 2	protein-coding
19.3333-5	chr16	26253704	26253861	+	0.133333	NA	Intergenic	Intergenic	228545	NR_036146	100422923		NR_036146	ENSG00000265005	MIR548W	-	microRNA 548w	ncRNA
13.1333-2	chr1	104209498	104209656	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	136554	NR_033990	100129138	Hs.514487	NR_033990	ENSG00000215869	LOC100129138	-	THAP domain containing 3 pseudogene	pseudo
31.0999-3	chr19	58211456	58211800	+	0.133333	NA	exon (NM_001278734, exon 7 of 8)	exon (NM_001278734, exon 7 of 8)	-17053	NM_001320782	27300	Hs.438994	NM_014480	ENSG00000198131	ZNF544	-	zinc finger protein 544	protein-coding
27.6666-4	chr4	24303999	24304281	+	0.133333	NA	intron (NM_001330752, intron 1 of 13)	intron (NM_001330752, intron 1 of 13)	168765	NM_001354826	10891	Hs.527078	NM_013261	ENSG00000109819	PPARGC1A	LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1	PPARG coactivator 1 alpha	protein-coding
18.1333-18	chr8	72667036	72667211	+	0.133333	NA	intron (NM_004770, intron 2 of 2)	MIRb|SINE|MIR	-64922	NR_110656	101926908	Hs.680588	NR_110656	ENSG00000253726	LOC101926908	-	uncharacterized LOC101926908	ncRNA
26.0667-2	chr2	117193133	117193471	+	0.133333	NA	Intergenic	L1MC5a|LINE|L1	-621389	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
31.2999	chr1	89994489	89994860	+	0.133333	NA	promoter-TSS (NM_182976)	promoter-TSS (NM_182976)	292	NR_002830	492303	Hs.550796	NR_002830		GEMIN8P4	-	gem nuclear organelle associated protein 8 pseudogene 4	pseudo
36.7-3	chr12	2235895	2236217	+	0.133333	NA	intron (NM_199460, intron 3 of 49).2	MIR|SINE|MIR	-12575	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA
37.0666-3	chr5	91655904	91656365	+	0.133333	NA	Intergenic	L1PB4|LINE|L1	-272817	NM_020801	57561	Hs.24684	NM_020801	ENSG00000113369	ARRDC3	TLIMP	arrestin domain containing 3	protein-coding
16.6666	chr2	72307807	72307979	+	0.133333	NA	intron (NR_135773, intron 19 of 21)	intron (NR_135773, intron 19 of 21)	-160031	NM_019885	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
31.7333-4	chr2	34173623	34174080	+	0.133333	NA	intron (NR_126403, intron 4 of 5)	MER44A|DNA|TcMar-Tigger	106625	NR_132381	106144585	Hs.580486	NR_132381	ENSG00000237790	LINC01318	-	long intergenic non-protein coding RNA 1318	ncRNA
21.7-12	chr4	171688102	171688321	+	0.133333	NA	Intergenic	Intergenic	-49448	NR_147157	105377536	Hs.550719	NR_147157	ENSG00000249297	LINC02174	-	long intergenic non-protein coding RNA 2174	ncRNA
64.2333-2	chr6	38150068	38150891	+	0.133333	NA	intron (NM_021943, intron 5 of 5)	intron (NM_021943, intron 5 of 5)	330752	NM_021943	60685	Hs.36959	NM_021943	ENSG00000156639	ZFAND3	TEX27	zinc finger AN1-type containing 3	protein-coding
49.7332	chr13	58692874	58693293	+	0.133333	NA	Intergenic	L2a|LINE|L2	-459966	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA
36.6667-2	chr2	4434507	4434980	+	0.133333	NA	Intergenic	THE1D|LTR|ERVL-MaLR	221479	NR_034134	727982	Hs.444391	NR_034134	ENSG00000231532	LINC01249	-	long intergenic non-protein coding RNA 1249	ncRNA
32.5999	chr3	165404262	165404777	+	0.133333	NA	intron (NR_125764, intron 3 of 5)	L1M1|LINE|L1	197559	NR_125764	103695433	Hs.570689	NR_125764		LINC01322	-	long intergenic non-protein coding RNA 1322	ncRNA
36.3666	chr13	95278740	95279182	+	0.133333	NA	intron (NM_001105515, intron 1 of 20)	intron (NM_001105515, intron 1 of 20)	22485	NM_005845	10257	Hs.508423	NM_005845	ENSG00000125257	ABCC4	MOAT-B|MOATB|MRP4	ATP binding cassette subfamily C member 4	protein-coding
31.3333	chr10	117778425	117778746	+	0.133333	NA	Intergenic	MLT1I|LTR|ERVL-MaLR	-233517	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA
22.9333-13	chr5	54844359	54844693	+	0.133333	NA	Intergenic	Intergenic	-100268	NR_104658	102467080	Hs.637409	NR_104658		LOC102467080	-	uncharacterized LOC102467080	ncRNA
43.8666-2	chr14	36760908	36761615	+	0.133333	NA	intron (NM_001171170, intron 3 of 10)	intron (NM_001171170, intron 3 of 10)	103693	NM_006194	5083	Hs.132576	NM_006194	ENSG00000198807	PAX9	STHAG3	paired box 9	protein-coding
12.1333-5	chr7	84251178	84251330	+	0.133333	NA	Intergenic	Intergenic	-56465	NM_006080	10371	Hs.252451	NM_006080	ENSG00000075213	SEMA3A	COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1	semaphorin 3A	protein-coding
26.2-24	chr8	126653524	126653818	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-95193	NM_174911	157638	Hs.124951	NM_174911	ENSG00000168672	LRATD2	BCMP101|FAM84B|NSE2	LRAT domain containing 2	protein-coding
9.16664	chr7	32922830	32922898	+	0.133333	NA	intron (NR_003500, intron 3 of 5)	intron (NR_003500, intron 3 of 5)	20306	NR_003500	441212	Hs.648086	NM_001039754	ENSG00000205763	RP9P	-	RP9 pseudogene	pseudo
11.2667	chr12	115604698	115604856	+	0.133333	NA	Intergenic	G-rich|Low_complexity|Low_complexity	543877	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA
9-2	chr20	40629753	40629874	+	0.133333	NA	Intergenic	Intergenic	59423	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding
35.2666-2	chr16	49055981	49056343	+	0.133333	NA	Intergenic	Intergenic	225676	NM_004352	869	Hs.458423	NM_004352	ENSG00000102924	CBLN1	-	cerebellin 1 precursor	protein-coding
25.3333-15	chr8	132332123	132332513	+	0.133333	NA	intron (NM_004519, intron 1 of 14)	MLT1F2|LTR|ERVL-MaLR	114944	NM_001204824	3786	Hs.374023	NM_004519	ENSG00000184156	KCNQ3	BFNC2|EBN2|KV7.3	potassium voltage-gated channel subfamily Q member 3	protein-coding
24.6333-11	chr7	42721918	42722231	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-15627	NR_110833	101928795	Hs.566753	NR_110833	ENSG00000238284	LINC01448	-	long intergenic non-protein coding RNA 1448	ncRNA
40.3-8	chr8	66509117	66509600	+	0.133333	NA	intron (NM_152765, intron 3 of 5)	intron (NM_152765, intron 3 of 5)	15792	NM_152765	254778	Hs.268869	NM_152765	ENSG00000169085	VXN	C8orf46	vexin	protein-coding
44.2332-2	chr4	126510517	126510848	+	0.133333	NA	Intergenic	Intergenic	1003423	NR_031746	100302267		NR_031746	ENSG00000283550	MIR2054	hsa-mir-2054	microRNA 2054	ncRNA
27.1666-3	chr6	61732760	61732988	+	0.133333	NA	intron (NR_146874, intron 6 of 13)	intron (NR_146874, intron 6 of 13)	158744	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
18.7667	chr1	156516058	156516311	+	0.133333	NA	Intergenic	MLT1G1|LTR|ERVL-MaLR	-15409	NM_005920	4209	Hs.314327	NM_005920	ENSG00000116604	MEF2D	-	myocyte enhancer factor 2D	protein-coding
32.7-7	chr3	117023597	117024059	+	0.133333	NA	Intergenic	(CCTT)n|Simple_repeat|Simple_repeat	102397	NR_121607	100506724	Hs.125983	NR_121607	ENSG00000242385	LINC00901	LSAMP-AS4|TCONS_00005428	long intergenic non-protein coding RNA 901	ncRNA
52.1-2	chrX	97370965	97371707	+	0.133333	NA	intron (NM_007309, intron 24 of 26)	intron (NM_007309, intron 24 of 26)	193199	NR_125391	10824	Hs.654372	NR_125391	ENSG00000236256	DIAPH2-AS1	EPAG	DIAPH2 antisense RNA 1	ncRNA
24.3333-8	chr3	82626339	82626671	+	0.133333	NA	Intergenic	ERVL-E-int|LTR|ERVL	640363	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
43.9333-3	chr14	55236682	55237184	+	0.133333	NA	Intergenic	HAL1M8|LINE|L1	-34488	NM_017943	55030	Hs.525348	NM_017943	ENSG00000178974	FBXO34	CGI-301|Fbx34	F-box protein 34	protein-coding
23.1-7	chr19	57106030	57106303	+	0.133333	NA	Intergenic	Intergenic	-13975	NM_020903	57663	Hs.515632	NM_020903	ENSG00000131864	USP29	HOM-TES-84/86	ubiquitin specific peptidase 29	protein-coding
28.9666-3	chr2	175924668	175925178	+	0.133333	NA	non-coding (NR_130941, exon 15 of 15)	non-coding (NR_130941, exon 15 of 15)	77344	NM_030650	80856	Hs.209561	NM_030650	ENSG00000144320	LNPK	KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless	lunapark, ER junction formation factor	protein-coding
15.6	chr10	103732651	103732935	+	0.133333	NA	intron (NM_014631, intron 4 of 13)	intron (NM_014631, intron 4 of 13)	-13986	NR_038940	100505839	Hs.655149	NR_038940	ENSG00000280693	SH3PXD2A-AS1	-	SH3PXD2A antisense RNA 1	ncRNA
32.6667-7	chr6	62653331	62653890	+	0.133333	NA	Intergenic	LTR25-int|LTR|ERV1	-367383	NR_146870	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
36.1667	chr10	23554891	23555516	+	0.133333	NA	Intergenic	L1ME4a|LINE|L1	115934	NM_001145373	220213	Hs.499042	NM_001145373	ENSG00000165312	OTUD1	DUBA7|OTDC1	OTU deubiquitinase 1	protein-coding
36.4-3	chr12	24774436	24774822	+	0.133333	NA	Intergenic	AluJo|SINE|Alu	127593	NM_001178094	586	Hs.438993	NM_005504	ENSG00000060982	BCAT1	BCATC|BCT1|ECA39|MECA39|PNAS121|PP18	branched chain amino acid transaminase 1	protein-coding
44.5333-4	chr18	4233475	4233902	+	0.133333	NA	intron (NM_001242761, intron 1 of 11)	L1MD3|LINE|L1	-30914	NR_036489	284215	Hs.647594	NR_036489	ENSG00000261520	DLGAP1-AS5	-	DLGAP1 antisense RNA 5	ncRNA
37.7999	chr5	36755463	36756080	+	0.133333	NA	Intergenic	Intergenic	120923	NR_046262	646719	Hs.355684	NR_046262	ENSG00000285967	NIPBL-DT	NIPBL-AS|NIPBL-AS1	NIPBL divergent transcript	ncRNA
27.0667-12	chr7	25306724	25307077	+	0.133333	NA	Intergenic	Intergenic	-78414	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding
34.2667-4	chr10	93266557	93267039	+	0.133333	NA	Intergenic	MER102a|DNA|hAT-Charlie	192905	NM_000783	1592	Hs.150595	NM_000783	ENSG00000095596	CYP26A1	CP26|CYP26|P450RAI|P450RAI1	cytochrome P450 family 26 subfamily A member 1	protein-coding
31.4667-9	chr8	109483707	109484155	+	0.133333	NA	intron (NM_177531, intron 57 of 77)	intron (NM_177531, intron 57 of 77)	-55769	NM_198120	9166	Hs.409368	NM_004215	ENSG00000147654	EBAG9	EB9|PDAF	estrogen receptor binding site associated antigen 9	protein-coding
24.9333-2	chr20	61842760	61843088	+	0.133333	NA	intron (NM_001252339, intron 3 of 14)	L1MC|LINE|L1	110738	NR_031658	100302168		NR_031658	ENSG00000284193	MIR1257	MIRN1257|hsa-mir-1257	microRNA 1257	ncRNA
27.2666-4	chr3	89729330	89729709	+	0.133333	NA	Intergenic	L1M2b|LINE|L1	621898	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
22.8666-8	chr5	23287562	23287790	+	0.133333	NA	Intergenic	Intergenic	-219933	NM_020227	56979	Hs.283096	NM_020227	ENSG00000164256	PRDM9	KMT8B|MEISETZ|MSBP3|PFM6|ZNF899	PR/SET domain 9	protein-coding
15.8-11	chr4	70905124	70905248	+	0.133333	NA	intron (NM_173468, intron 1 of 5)	intron (NM_173468, intron 1 of 5)	2817	NM_173468	92597	Hs.691454	NM_173468	ENSG00000173542	MOB1B	MATS2|MOB4A|MOBKL1A	MOB kinase activator 1B	protein-coding
18.7-6	chr2	56224856	56225170	+	0.133333	NA	intron (NM_001348516, intron 2 of 2)	L1MB8|LINE|L1	-39243	NR_125368	100129434	Hs.580330	NR_125368		LOC100129434	-	uncharacterized LOC100129434	ncRNA
30.2-7	chr20	47201248	47201747	+	0.133333	NA	Intergenic	Intergenic	34530	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA
18.9-4	chr10	86310295	86310472	+	0.133333	NA	intron (NM_017551, intron 2 of 15)	intron (NM_017551, intron 2 of 15)	-45595	NR_029907	442911		NR_029907	ENSG00000199104	MIR346	MIRN346|hsa-mir-346|miR-346|miRNA346	microRNA 346	ncRNA
23.6-5	chr12	74262098	74262387	+	0.133333	NA	intron (NR_038300, intron 3 of 6)	intron (NR_038300, intron 3 of 6)	30389	NR_038300	100507377	Hs.455715	NR_038300	ENSG00000251138	LOC100507377	-	uncharacterized LOC100507377	ncRNA
18.1666	chr1	180594973	180595412	+	0.133333	NA	Intergenic	Intergenic	36218	NR_125716	148756		NR_125716	ENSG00000236719	OVAAL	LINC01131|OVAL	ovarian adenocarcinoma amplified long non-coding RNA	ncRNA
35.5666-5	chr9	29591620	29591999	+	0.133333	NA	Intergenic	Intergenic	-378208	NM_001258282	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
33.4666-3	chr12	15525549	15525926	+	0.133333	NA	intron (NM_030667, intron 11 of 26)	MLT1J|LTR|ERVL-MaLR	-20874	NM_030668	5800	Hs.160871	NM_002848	ENSG00000151490	PTPRO	GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O	protein tyrosine phosphatase receptor type O	protein-coding
24.6-2	chr11	22494895	22495122	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-2989	NR_120583	102723378	Hs.374255	NR_120583	ENSG00000255323	LINC01495	-	long intergenic non-protein coding RNA 1495	ncRNA
49.5	chr16	81923471	81924242	+	0.133333	NA	intron (NM_002661, intron 22 of 32)	MIRb|SINE|MIR	87614	NM_145168	93517	Hs.87779	NM_145168	ENSG00000184860	SDR42E1	HSPC105	short chain dehydrogenase/reductase family 42E, member 1	protein-coding
30.0666	chr5	31887981	31888278	+	0.133333	NA	intron (NM_178140, intron 2 of 24)	(TTCTT)n|Simple_repeat|Simple_repeat	48030	NR_036241	100422874		NR_036241	ENSG00000266243	MIR4279	-	microRNA 4279	ncRNA
49.6-2	chr4	73849248	73849987	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-3679	NM_002620	5197	Hs.72933	NM_002620	ENSG00000109272	PF4V1	CXCL4L1|CXCL4V1|PF4-ALT|PF4A|SCYB4V1	platelet factor 4 variant 1	protein-coding
23.5333-4	chr14	69000586	69001008	+	0.133333	NA	Intergenic	LTR67B|LTR|ERVL	21115	NR_073422	161159	Hs.603341	NR_073422	ENSG00000259062	ACTN1-AS1	C14orf84	ACTN1 antisense RNA 1	ncRNA
36.9333-2	chr14	56491867	56492269	+	0.133333	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-22263	NR_135241	101927690	Hs.385477	NR_135241	ENSG00000258803	LOC101927690	-	uncharacterized LOC101927690	ncRNA
28.7666-8	chr8	41907793	41908220	+	0.133333	NA	Intergenic	L2a|LINE|L2	-11265	NM_001142446	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding
26.2667-2	chr16	51835195	51835573	+	0.133333	NA	Intergenic	MamRep4096|DNA|hAT-Tip100	72865	NR_110916	101927364	Hs.133120	NR_110916	ENSG00000260057	LINC01571	-	long intergenic non-protein coding RNA 1571	ncRNA
37.4-6	chr4	76876539	76876950	+	0.133333	NA	Intergenic	L1ME4b|LINE|L1	21400	NM_001029870	345079	Hs.257292	NM_001029870	ENSG00000186212	SOWAHB	ANKRD56	sosondowah ankyrin repeat domain family member B	protein-coding
36.7-5	chr2	10659537	10660285	+	0.133333	NA	intron (NR_048552, intron 8 of 19)	intron (NR_048552, intron 8 of 19)	30064	NM_024894	79954	Hs.222494	NM_024894	ENSG00000115761	NOL10	PQBP5	nucleolar protein 10	protein-coding
22.2666-2	chr19	8049477	8049727	+	0.133333	NA	Intergenic	Intergenic	-3160	NM_005624	6370	Hs.310511	NM_005624	ENSG00000131142	CCL25	Ckb15|SCYA25|TECK	C-C motif chemokine ligand 25	protein-coding
23.9666-2	chr12	48773538	48773779	+	0.133333	NA	intron (NM_015270, intron 15 of 21)	intron (NM_015270, intron 15 of 21)	-1621	NR_039850	100616262		NR_039850	ENSG00000264201	MIR4701	-	microRNA 4701	ncRNA
27-3	chr11	34301200	34301499	+	0.133333	NA	intron (NM_145804, intron 1 of 16)	intron (NM_145804, intron 1 of 16)	56661	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding
26.5333-13	chr6	84840547	84840805	+	0.133333	NA	Intergenic	L1PA7|LINE|L1	-76078	NM_001080508	9096	Hs.251830	NM_001080508	ENSG00000112837	TBX18	CAKUT2	T-box transcription factor 18	protein-coding
52.6999	chr5	26294842	26295444	+	0.133333	NA	Intergenic	Intergenic	743443	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
39.9333-4	chr13	58390968	58391330	+	0.133333	NA	Intergenic	AluSz|SINE|Alu	-158032	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA
20.8667-10	chrX	65543568	65543879	+	0.133333	NA	Intergenic	Intergenic	8698	NR_033742	83957	Hs.652967	NR_033742	ENSG00000227942	FRMD8P1	-	FERM domain containing 8 pseudogene 1	pseudo
34.5666-3	chr11	55658218	55658646	+	0.133333	NA	Intergenic	MER73|LTR|ERVL	-6735	NM_001004704	219432	Hs.511921	NM_001004704	ENSG00000181903	OR4C6	OR11-138	olfactory receptor family 4 subfamily C member 6	protein-coding
37.5-3	chr7	83955247	83955699	+	0.133333	NA	TTS (NM_006080)	TTS (NM_006080)	239316	NM_006080	10371	Hs.252451	NM_006080	ENSG00000075213	SEMA3A	COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1	semaphorin 3A	protein-coding
32.9666-5	chr2	80198802	80199283	+	0.133333	NA	intron (NM_001282598, intron 7 of 17)	AluSg|SINE|Alu	105710	NM_178839	347730	Hs.591580	NM_178839	ENSG00000162951	LRRTM1	-	leucine rich repeat transmembrane neuronal 1	protein-coding
14.7333-5	chr13	101322016	101322132	+	0.133333	NA	intron (NM_001350749, intron 7 of 43)	intron (NM_001350749, intron 7 of 43)	94434	NM_052867	259232	Hs.525146	NM_052867	ENSG00000102452	NALCN	CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1	sodium leak channel, non-selective	protein-coding
29.8666-5	chr3	9511768	9512039	+	0.133333	NA	intron (NM_198560, intron 2 of 3)	intron (NM_198560, intron 2 of 3)	41919	NM_198560	375323	Hs.56782	NM_198560	ENSG00000156959	LHFPL4	GARLH4	LHFPL tetraspan subfamily member 4	protein-coding
33-4	chr15	38950509	38950911	+	0.133333	NA	Intergenic	Intergenic	254112	NR_160786								
31.9999	chrX	5535940	5536227	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	-690275	NR_136577	105373156	Hs.21107	NR_136577		LOC105373156	-	uncharacterized LOC105373156	ncRNA
28.3333-8	chr17	59399652	59399993	+	0.133333	NA	3' UTR (NM_001005404, exon 5 of 5)	3' UTR (NM_001005404, exon 5 of 5)	33739	NR_039882	100616204		NR_039882	ENSG00000263857	MIR4729	-	microRNA 4729	ncRNA
28.3333-13	chr8	86580859	86581103	+	0.133333	NA	intron (NM_019098, intron 15 of 17)	intron (NM_019098, intron 15 of 17)	66546	NM_003909	8895	Hs.191219	NM_003909	ENSG00000085719	CPNE3	CPN3|PRO1071	copine 3	protein-coding
25.2333-3	chr11	15292957	15293176	+	0.133333	NA	Intergenic	Intergenic	143964	NM_001278315	387755	Hs.591997	NM_001031853	ENSG00000188487	INSC	-	INSC spindle orientation adaptor protein	protein-coding
43.7333	chr1	84419538	84420185	+	0.133333	NA	Intergenic	Intergenic	11510	NM_058248	58511	Hs.129142	NM_021233	ENSG00000137976	DNASE2B	DLAD	deoxyribonuclease 2 beta	protein-coding
21.2666-8	chr3	193172222	193172478	+	0.133333	NA	Intergenic	L1MB7|LINE|L1	-68872	NM_001366112	57110	Hs.36761	NM_020386	ENSG00000127252	PLAAT1	A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1	phospholipase A and acyltransferase 1	protein-coding
35.2333-6	chr6	128729921	128730326	+	0.133333	NA	Intergenic	Intergenic	-153015	NM_001079823	3908	Hs.200841	NM_000426	ENSG00000196569	LAMA2	LAMM|MDC1A	laminin subunit alpha 2	protein-coding
50.7333	chr1	86327549	86328151	+	0.133333	NA	Intergenic	L1M6|LINE|L1	29837	NR_107010	102465842		NR_107010	ENSG00000278281	MIR7856	hsa-mir-7856	microRNA 7856	ncRNA
32.6333-3	chr17	52848401	52849055	+	0.133333	NA	Intergenic	Intergenic	-13393	NR_146899	105371831	Hs.97791	NR_146899	ENSG00000226364	LINC02089	-	long intergenic non-protein coding RNA 2089	ncRNA
30.0667-12	chrX	79566352	79566781	+	0.133333	NA	Intergenic	L1PA11|LINE|L1	-199014	NM_001171581	9452	Hs.17109	NM_004867	ENSG00000078596	ITM2A	BRICD2A|E25A	integral membrane protein 2A	protein-coding
24.5333-6	chr17	53128715	53129088	+	0.133333	NA	Intergenic	HAL1b|LINE|L1	143396	NM_001243552	100506650	Hs.146556	NM_001243552		C17orf112	-	chromosome 17 open reading frame 112	protein-coding
31.0667-2	chr1	180816914	180817366	+	0.133333	NA	intron (NR_137330, intron 7 of 12)	Tigger3b|DNA|TcMar-Tigger	-95757	NM_020950	57710	Hs.734816	NM_020950	ENSG00000135835	KIAA1614	-	KIAA1614	protein-coding
13.0667-9	chr5	121841786	121841956	+	0.133333	NA	Intergenic	MER45B|DNA|hAT-Tip100	-10011	NM_177478	94033	Hs.105324	NM_177478	ENSG00000181867	FTMT	MTF	ferritin mitochondrial	protein-coding
33.2333-6	chr22	29661514	29662054	+	0.133333	NA	intron (NR_156186, intron 9 of 16)	intron (NR_156186, intron 9 of 16)	58151	NM_181829	4771	Hs.187898	NM_000268	ENSG00000186575	NF2	ACN|BANF|SCH	neurofibromin 2	protein-coding
32.5999-2	chr5	115343420	115343687	+	0.133333	NA	Intergenic	LTR41B|LTR|ERVL	-46899	NM_001040440	153733	Hs.436121	NM_152549	ENSG00000164221	CCDC112	MBC1	coiled-coil domain containing 112	protein-coding
21.3-10	chr2	70123564	70123777	+	0.133333	NA	TTS (NR_024444)	TTS (NR_024444)	1646	NR_024444	100133985	Hs.135528	NR_024444	ENSG00000231327	LINC01816	-	long intergenic non-protein coding RNA 1816	ncRNA
59.0666-2	chr5	86497879	86498561	+	0.133333	NA	Intergenic	MIR3|SINE|MIR	-119721	NM_001867	1350	Hs.430075	NM_001867	ENSG00000127184	COX7C	-	cytochrome c oxidase subunit 7C	protein-coding
15.8333-2	chr1	156655626	156655917	+	0.133333	NA	intron (NM_021948, intron 8 of 13)	intron (NM_021948, intron 8 of 13)	13654	NM_021948	63827	Hs.516904	NM_021948	ENSG00000132692	BCAN	BEHAB|CSPG7	brevican	protein-coding
34.5667-3	chr16	78707125	78707539	+	0.133333	NA	intron (NM_001291997, intron 7 of 7)	intron (NM_001291997, intron 7 of 7)	607678	NM_001291997	51741	Hs.461453	NM_016373	ENSG00000186153	WWOX	D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1	WW domain containing oxidoreductase	protein-coding
42.2333-2	chr7	81946341	81946751	+	0.133333	NA	3' UTR (NM_001366867, exon 39 of 39)	3' UTR (NM_001366867, exon 39 of 39)	-62631	NR_110077	101927356	Hs.571348	NR_110076	ENSG00000223770	LOC101927356	-	uncharacterized LOC101927356	ncRNA
26.5-3	chr16	64718253	64718670	+	0.133333	NA	Intergenic	LTR8|LTR|ERV1	403602	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
47.5999	chr10	53505321	53505779	+	0.133333	NA	Intergenic	L2a|LINE|L2	-733850	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
20.5333-13	chr6	64070005	64070428	+	0.133333	NA	intron (NM_001292009, intron 32 of 43)	Charlie1a|DNA|hAT-Charlie	263380	NR_157848	112935969		NR_157848		SCAT8	EYS-AS1	S-phase cancer associated transcript 8	ncRNA
24.7333-8	chr2	148169017	148169342	+	0.133333	NA	intron (NM_018328, intron 2 of 14)	Tigger20a|DNA|TcMar-Tigger	-147575	NM_181742	5000	Hs.558364	NM_002552	ENSG00000115947	ORC4	ORC4L|ORC4P	origin recognition complex subunit 4	protein-coding
44.8666-2	chr2	151892727	151893118	+	0.133333	NA	intron (NM_000726, intron 2 of 13)	intron (NM_000726, intron 2 of 13)	-64501	NM_177985	26225	Hs.470233	NM_012097	ENSG00000162980	ARL5A	ARFLP5|ARL5	ADP ribosylation factor like GTPase 5A	protein-coding
28.8-7	chr2	228625396	228625763	+	0.133333	NA	Intergenic	MIR|SINE|MIR	-14184	NR_151716	101928765	Hs.334040	NR_151716	ENSG00000232023	LINC01807	-	long intergenic non-protein coding RNA 1807	ncRNA
42.6667-4	chr6	45967692	45968313	+	0.133333	NA	intron (NM_001370649, intron 1 of 5)	L2c|LINE|L2	-30405	NR_045672	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding
29.5999	chr1	95339025	95339411	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	12889	NR_146486	101928169		NR_146486		LINC01650	-	long intergenic non-protein coding RNA 1650	ncRNA
28.4-3	chr13	22374101	22374437	+	0.133333	NA	Intergenic	MLT1J2|LTR|ERVL-MaLR	163984	NR_103810	100506622	Hs.255773	NR_103810	ENSG00000276476	LINC00540	-	long intergenic non-protein coding RNA 540	ncRNA
39.2667-3	chr15	84791415	84791914	+	0.133333	NA	intron (NM_014630, intron 5 of 10)	L2c|LINE|L2	-25016	NM_020778	57538	Hs.459183	NM_020778	ENSG00000136383	ALPK3	CMH27|MAK|MIDORI	alpha kinase 3	protein-coding
22.4333-9	chr17	28549964	28550285	+	0.133333	NA	intron (NM_054035, intron 1 of 3)	intron (NM_054035, intron 1 of 3)	2500	NM_001330166	9094	Hs.410455	NM_005148	ENSG00000109103	UNC119	HRG4|IMD13|POC7|POC7A	unc-119 lipid binding chaperone	protein-coding
36.8666	chr11	64317619	64317969	+	0.133333	NA	promoter-TSS (NM_001358516)	promoter-TSS (NM_001358516)	290	NM_016404	51504	Hs.333579	NM_016404	ENSG00000173113	TRMT112	HSPC152|HSPC170|TRM112|TRMT11-2|hTrm112	tRNA methyltransferase subunit 11-2	protein-coding
35.9666-3	chr4	183166510	183166934	+	0.133333	NA	intron (NM_024949, intron 1 of 22)	L2c|LINE|L2	67465	NM_024949	80014	Hs.333179	NM_024949	ENSG00000151718	WWC2	BOMB	WW and C2 domain containing 2	protein-coding
30-6	chr15	65116526	65116817	+	0.133333	NA	TTS (NM_005707)	TTS (NM_005707)	-10312	NM_001163692	390595	Hs.659256	NM_001163692	ENSG00000246922	UBAP1L	UBAP-1L	ubiquitin associated protein 1 like	protein-coding
38.9666	chr2	68377768	68378263	+	0.133333	NA	intron (NM_002664, intron 1 of 8)	intron (NM_002664, intron 1 of 8)	12733	NM_002664	5341	Hs.468840	NM_002664	ENSG00000115956	PLEK	P47	pleckstrin	protein-coding
45.3999-2	chr5	104244587	104245078	+	0.133333	NA	Intergenic	Intergenic	-682043	NM_001300741	83594	Hs.434289	NM_031438	ENSG00000112874	NUDT12	-	nudix hydrolase 12	protein-coding
30.6-8	chr3	17512340	17512709	+	0.133333	NA	intron (NM_001349091, intron 1 of 19)	intron (NM_001349091, intron 1 of 19)	187496	NM_001134381	9779	Hs.475629	NM_014744	ENSG00000131374	TBC1D5	-	TBC1 domain family member 5	protein-coding
45.4666-3	chr9	115995338	115995842	+	0.133333	NA	Intergenic	MamRep434|DNA|TcMar-Tigger	-70383	NR_024032	58483	Hs.23367	NR_024032	ENSG00000204148	LINC00474	C9orf27|EST-YD1	long intergenic non-protein coding RNA 474	ncRNA
41.5666-2	chr10	126629555	126630034	+	0.133333	NA	intron (NM_001350922, intron 2 of 8)	intron (NM_001350922, intron 2 of 8)	40716	NM_001350923	118611	Hs.587663	NM_001004298	ENSG00000154493	C10orf90	FATS|bA422P15.2	chromosome 10 open reading frame 90	protein-coding
24.3666	chr17	60538249	60538431	+	0.133333	NA	Intergenic	AluSg|SINE|Alu	-12098	NM_006380	10513	Hs.84084	NM_006380	ENSG00000062725	APPBP2	APP-BP2|HS.84084|PAT1	amyloid beta precursor protein binding protein 2	protein-coding
34.9333-3	chr12	19620597	19620921	+	0.133333	NA	Intergenic	Intergenic	180160	NM_001267043	121536	Hs.126497	NM_153207	ENSG00000139154	AEBP2	-	AE binding protein 2	protein-coding
40.5333-4	chr13	67930843	67931423	+	0.133333	NA	Intergenic	MER110|LTR|ERV1	558746	NR_130792	100874145	Hs.508194	NR_130792	ENSG00000230040	LINC00364	LncRNA00364	long intergenic non-protein coding RNA 364	ncRNA
35.4333-7	chr4	163623608	163624091	+	0.133333	NA	intron (NM_001166373, intron 4 of 7)	LTR16E1|LTR|ERVL	-10315	NM_017923	55016	Hs.592804	NM_017923	ENSG00000145416	MARCH1	MARCH-I|RNF171	membrane associated ring-CH-type finger 1	protein-coding
18-16	chr6	15424281	15424473	+	0.133333	NA	intron (NM_004973, intron 3 of 17)	intron (NM_004973, intron 3 of 17)	175522	NM_001267040	3720	Hs.269059	NM_004973	ENSG00000008083	JARID2	JMJ	jumonji and AT-rich interaction domain containing 2	protein-coding
34.2-7	chr4	64242459	64242804	+	0.133333	NA	Intergenic	Intergenic	166819	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
28.1333-7	chr15	67745026	67745419	+	0.133333	NA	intron (NM_001206804, intron 17 of 21)	intron (NM_001206804, intron 17 of 21)	-80287	NM_001365915	390598	Hs.451224	NM_001031807	ENSG00000188779	SKOR1	CORL1|FUSSEL15|LBXCOR1	SKI family transcriptional corepressor 1	protein-coding
41.1999-4	chr3	88918966	88919422	+	0.133333	NA	Intergenic	Intergenic	-188427	NM_005233	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
34.2666-3	chr5	2622968	2623334	+	0.133333	NA	Intergenic	Intergenic	-89440	NR_145480	101234261		NR_145480	ENSG00000281560	LSINCT5	-	long stress-induced non-coding transcript 5	ncRNA
23.9333-10	chr3	168242295	168242601	+	0.133333	NA	Intergenic	L1MB7|LINE|L1	-7074	NR_021485	93556	Hs.478158	NR_021485		EGFEM1P	C3orf50|NCRNA00259	EGF like and EMI domain containing 1, pseudogene	pseudo
24.5333-10	chr4	45846849	45847280	+	0.133333	NA	Intergenic	Intergenic	276990	NM_173536	2565	Hs.375051	NM_173536	ENSG00000163285	GABRG1	-	gamma-aminobutyric acid type A receptor gamma1 subunit	protein-coding
30.8666-3	chr5	84684705	84684994	+	0.133333	NA	Intergenic	Intergenic	-299969	NM_005711	10085	Hs.482730	NM_005711	ENSG00000164176	EDIL3	DEL1	EGF like repeats and discoidin domains 3	protein-coding
23.1666-3	chr7	121947111	121947309	+	0.133333	NA	intron (NM_001206839, intron 2 of 28)	L1MC4|LINE|L1	74049	NM_001206839	5803	Hs.489824	NM_002851	ENSG00000106278	PTPRZ1	HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan	protein tyrosine phosphatase receptor type Z1	protein-coding
17.0666-2	chr11	120817407	120817738	+	0.133333	NA	intron (NM_001282470, intron 4 of 19)	intron (NM_001282470, intron 4 of 19)	1543	NR_133008	105369532	Hs.694510	NR_133008		LOC105369532	-	uncharacterized LOC105369532	ncRNA
27.4-16	chr7	81099467	81099712	+	0.133333	NA	Intergenic	Intergenic	-177200	NM_001350120	10512	Hs.269109	NM_006379	ENSG00000075223	SEMA3C	SEMAE|SemE	semaphorin 3C	protein-coding
22.9-17	chr9	108944575	108944774	+	0.133333	NA	intron (NM_003798, intron 15 of 18)	intron (NM_003798, intron 15 of 18)	10274	NM_017832	54942	Hs.29276	NM_017832	ENSG00000119328	ABITRAM	C9orf6|CG-8|FAM206A|Simiate	actin binding transcription modulator	protein-coding
15.5666	chr16	31924408	31924524	+	0.133333	NA	Intergenic	Intergenic	50659	NM_001265588	10308	Hs.460645	NM_003414	ENSG00000185947	ZNF267	HZF2	zinc finger protein 267	protein-coding
36.5999-2	chrX	118269648	118270105	+	0.133333	NA	Intergenic	L1ME3Cz|LINE|L1	-76197	NM_001184966	54521	Hs.98510	NM_019045	ENSG00000131725	WDR44	RAB11BP|RPH11|SYM-4	WD repeat domain 44	protein-coding
26.2-17	chr4	80809662	80809981	+	0.133333	NA	intron (NM_001206997, intron 4 of 6)	intron (NM_001206997, intron 4 of 6)	-220887	NM_001201	651	Hs.387411	NM_001201	ENSG00000152785	BMP3	BMP-3A	bone morphogenetic protein 3	protein-coding
45.1332	chr8	114257432	114257823	+	0.133333	NA	Intergenic	L1M2|LINE|L1	-820688	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
52.7999	chr19	28388634	28389070	+	0.133333	NA	Intergenic	MSTB|LTR|ERVL-MaLR	-217836	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA
25.2333	chr1	36418620	36418856	+	0.133333	NA	promoter-TSS (NR_145725)	promoter-TSS (NR_145725)	-160	NR_145725	109616970		NR_145725	ENSG00000201448	SNORA63C	-	small nucleolar RNA, H/ACA box 63C	snoRNA
19.4333-9	chr6	52348855	52349071	+	0.133333	NA	Intergenic	Intergenic	-13188	NM_133367	85315	Hs.239388	NM_133367	ENSG00000170915	PAQR8	C6orf33|LMPB1|MPRB	progestin and adipoQ receptor family member 8	protein-coding
13.1666	chr10	95639087	95639185	+	0.133333	NA	intron (NM_001323412, intron 2 of 16)	AluJr|SINE|Alu	17575	NM_002860	5832	Hs.500645	NM_002860	ENSG00000059573	ALDH18A1	ADCL3|ARCL3A|GSAS|P5CS|PYCS|SPG9|SPG9A|SPG9B	aldehyde dehydrogenase 18 family member A1	protein-coding
44.7-3	chr10	29447040	29447577	+	0.133333	NA	intron (NR_110927, intron 2 of 2)	MER1B|DNA|hAT-Charlie	37065	NR_110928	102724316	Hs.499209	NR_003930	ENSG00000224597	SVIL-AS1	-	SVIL antisense RNA 1	ncRNA
31.2-5	chr11	25135156	25135568	+	0.133333	NA	Intergenic	L1MC1|LINE|L1	638309	NM_001252008	338645	Hs.144138	NM_001009909	ENSG00000187398	LUZP2	KFSP2566|PRO6246	leucine zipper protein 2	protein-coding
41.1666-2	chr15	57575706	57576120	+	0.133333	NA	Intergenic	Intergenic	-15991	NR_104370	145781	Hs.437256	NM_001018090	ENSG00000137878	GCOM1	GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom	GRINL1A complex locus 1	protein-coding
15.3-11	chr8	65818876	65819088	+	0.133333	NA	intron (NM_001242318, intron 1 of 12)	L1M4a2|LINE|L1	23082	NM_001242318	5150	Hs.527119	NM_002603	ENSG00000205268	PDE7A	HCP1|PDE7	phosphodiesterase 7A	protein-coding
36.8-2	chr13	66219224	66219615	+	0.133333	NA	Intergenic	Intergenic	1169	NR_039853	100616205		NR_039853	ENSG00000263561	MIR4704	-	microRNA 4704	ncRNA
19.3333-14	chr5	34588711	34589077	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-67434	NM_015577	26064	Hs.431400	NM_015577	ENSG00000039560	RAI14	NORPEG|RAI13	retinoic acid induced 14	protein-coding
32.6-3	chr17	69158917	69159352	+	0.133333	NA	intron (NM_080282, intron 28 of 39)	L1M4a2|LINE|L1	-17239	NM_080284	23460	Hs.709514	NM_080284	ENSG00000154262	ABCA6	EST155051	ATP binding cassette subfamily A member 6	protein-coding
33.3333-8	chr6	4621647	4622234	+	0.133333	NA	Intergenic	LTR32|LTR|ERVL	11375	NR_122107	497048	Hs.591355	NM_001011540	ENSG00000205444	KU-MEL-3	-	uncharacterized LOC497048	ncRNA
19.6666	chr2	14594643	14594962	+	0.133333	NA	Intergenic	Intergenic	-37915	NM_001369364	151354	Hs.260855	NM_145175	ENSG00000162981	LRATD1	FAM84A|NSE1|PP11517	LRAT domain containing 1	protein-coding
45.7333-10	chr9	71364414	71364952	+	0.133333	NA	intron (NM_001366143, intron 1 of 25)	intron (NM_001366143, intron 1 of 25)	82288	NM_001366141	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding
35.6666-4	chr9	24129049	24129474	+	0.133333	NA	Intergenic	L1PA15|LINE|L1	-278660	NM_001351466	1993	Hs.166109	NM_004432	ENSG00000107105	ELAVL2	HEL-N1|HELN1|HUB	ELAV like RNA binding protein 2	protein-coding
19.2667-7	chr2	174026551	174026796	+	0.133333	NA	non-coding (NR_136175, exon 1 of 1)	non-coding (NR_136175, exon 1 of 1)	1393	NR_136175	100128905	Hs.456944	NR_136175	ENSG00000260868	LINC01960	-	long intergenic non-protein coding RNA 1960	ncRNA
53.7332	chr3	95240399	95240888	+	0.133333	NA	Intergenic	LTR1F|LTR|ERV1	302380	NR_015400	255025	Hs.130994	NR_015400	ENSG00000239589	LINC00879	-	long intergenic non-protein coding RNA 879	ncRNA
40.3333-4	chr6	68793123	68793712	+	0.133333	NA	intron (NM_001704, intron 3 of 31)	intron (NM_001704, intron 3 of 31)	158135	NM_001704	577	Hs.13261	NM_001704	ENSG00000135298	ADGRB3	BAI3	adhesion G protein-coupled receptor B3	protein-coding
24.2333-7	chr3	22777002	22777555	+	0.133333	NA	Intergenic	Intergenic	425300	NR_136177	100505877	Hs.125904	NR_136176	ENSG00000233153	UBE2E2-AS1	-	UBE2E2 antisense RNA 1 (head to head)	ncRNA
33.0666-3	chr10	81347830	81348210	+	0.133333	NA	Intergenic	L1M5|LINE|L1	-527174	NM_001370083	10718	Hs.125119	NM_001010848	ENSG00000185737	NRG3	HRG3|pro-NRG3	neuregulin 3	protein-coding
27.2-7	chr16	75933875	75934130	+	0.133333	NA	Intergenic	L4_B_Mam|LINE|RTE-X	-207512	NM_001355613	105371346		NM_001355613	ENSG00000283755	CPHXL	-	cytoplasmic polyadenylated homeobox like	protein-coding
19.3333-18	chrX	73289334	73289601	+	0.133333	NA	Intergenic	L1PA13|LINE|L1	-74616	NM_021963	4674	Hs.66180	NM_021963	ENSG00000186462	NAP1L2	BPX	nucleosome assembly protein 1 like 2	protein-coding
38.0666-6	chr6	35849248	35849591	+	0.133333	NA	intron (NM_003137, intron 13 of 15)	L1MA7|LINE|L1	44067	NM_182548	222662	Hs.367947	NM_182548	ENSG00000197753	LHFPL5	DFNB67|TMHS|dJ510O8.8	LHFPL tetraspan subfamily member 5	protein-coding
25.0666-2	chr17	62990622	62990978	+	0.133333	NA	intron (NM_025185, intron 1 of 25)	L2|LINE|L2	24565	NM_025185	26115	Hs.410889	NM_015623	ENSG00000170921	TANC2	ROLSA|rols	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	protein-coding
19.4666-2	chr22	26159606	26159810	+	0.133333	NA	Intergenic	Intergenic	-9754	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding
48.5332	chr11	102576386	102576960	+	0.133333	NA	TTS (NM_004771)	TTS (NM_004771)	-45926	NM_002423	4316	Hs.2256	NM_002423	ENSG00000137673	MMP7	MMP-7|MPSL1|PUMP-1	matrix metallopeptidase 7	protein-coding
13.2666-2	chr3	76959148	76959281	+	0.133333	NA	Intergenic	Intergenic	-80885	NM_001290040	6092	Hs.13305	NM_002942	ENSG00000185008	ROBO2	SAX3	roundabout guidance receptor 2	protein-coding
25.8-20	chr6	20747251	20747743	+	0.133333	NA	intron (NM_017774, intron 6 of 15)	L1MA9|LINE|L1	213040	NM_017774	54901	Hs.657604	NM_017774	ENSG00000145996	CDKAL1	-	CDK5 regulatory subunit associated protein 1 like 1	protein-coding
19.6666-3	chr5	129996630	129996777	+	0.133333	NA	intron (NM_175856, intron 2 of 2)	intron (NM_175856, intron 2 of 2)	92238	NM_175856	337876	Hs.213137	NM_175856	ENSG00000198108	CHSY3	CHSY2|CSS3	chondroitin sulfate synthase 3	protein-coding
14.0666	chr10	100365898	100366010	+	0.133333	NA	Intergenic	AluJo|SINE|Alu	-7622	NR_026762	90271	Hs.628088	NR_026762	ENSG00000235823	OLMALINC	C10orf75|HI-LNC80|LINC00263|NCRNA00263|OLMALINCAS	oligodendrocyte maturation-associated long intergenic non-coding RNA	ncRNA
22.9333-14	chr8	115027036	115027372	+	0.133333	NA	Intergenic	L1M5|LINE|L1	640809	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
30.4667-9	chr6	153309060	153309500	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-177998	NM_012419	26575	Hs.166313	NM_012419	ENSG00000091844	RGS17	RGS-17|RGSZ2|hRGS17	regulator of G protein signaling 17	protein-coding
31.4333-6	chr7	120360834	120361119	+	0.133333	NA	intron (NM_012281, intron 1 of 5)	intron (NM_012281, intron 1 of 5)	87801	NM_012281	3751	Hs.654739	NM_012281	ENSG00000184408	KCND2	KV4.2|RK5	potassium voltage-gated channel subfamily D member 2	protein-coding
20.5333-7	chr16	78669437	78669697	+	0.133333	NA	intron (NM_001291997, intron 7 of 7)	MER20|DNA|hAT-Charlie	569913	NM_001291997	51741	Hs.461453	NM_016373	ENSG00000186153	WWOX	D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1	WW domain containing oxidoreductase	protein-coding
41.0999	chr2	9551284	9551729	+	0.133333	NA	intron (NM_003183, intron 1 of 18)	AluY|SINE|Alu	4324	NM_003183	6868	Hs.404914	NM_003183	ENSG00000151694	ADAM17	ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE	ADAM metallopeptidase domain 17	protein-coding
18.6-18	chr7	34748943	34749131	+	0.133333	NA	intron (NR_015356, intron 2 of 4)	L3|LINE|CR1	9235	NR_033664	404744	Hs.487951	NM_207283	ENSG00000197085	NPSR1-AS1	AAA1	NPSR1 antisense RNA 1	ncRNA
41.5999-3	chr3	7988302	7988760	+	0.133333	NA	intron (NR_110131, intron 2 of 3)	intron (NR_110131, intron 2 of 3)	27776	NR_110131	101927394	Hs.517767	NR_110131	ENSG00000227110	LOC101927394	-	uncharacterized LOC101927394	ncRNA
29.7333-4	chr12	21859946	21860336	+	0.133333	NA	intron (NM_005691, intron 19 of 37)	MIRb|SINE|MIR	76553	NM_005691	10060	Hs.732701	NM_005691	ENSG00000069431	ABCC9	ABC37|ATFB12|CANTU|CMD1O|SUR2	ATP binding cassette subfamily C member 9	protein-coding
31.1333	chr14	35081493	35082051	+	0.133333	NA	3' UTR (NM_001289022, exon 6 of 6)	3' UTR (NM_001289022, exon 6 of 6)	691	NR_110415	101927178	Hs.617139	NR_110415	ENSG00000151327	LOC101927178	-	uncharacterized LOC101927178	ncRNA
32.3666-3	chr15	54743327	54743739	+	0.133333	NA	Intergenic	L1MA6|LINE|L1	-313214	NR_135679	105370829	Hs.174934	NR_135679	ENSG00000260937	LOC105370829	-	uncharacterized LOC105370829	ncRNA
32.6	chr1	188440397	188440753	+	0.133333	NA	Intergenic	L1MEc|LINE|L1	996947	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
36.4333-2	chr4	74816611	74816993	+	0.133333	NA	Intergenic	L1PA8|LINE|L1	-22279	NM_001316963	685	Hs.591704	NM_001729	ENSG00000174808	BTC	-	betacellulin	protein-coding
36.4-7	chr2	148407656	148408060	+	0.133333	NA	intron (NM_018328, intron 5 of 14)	intron (NM_018328, intron 5 of 14)	-236893	NM_015630	26122	Hs.23270	NM_015630	ENSG00000135999	EPC2	EPC-LIKE	enhancer of polycomb homolog 2	protein-coding
31.5666	chr16	88896378	88896688	+	0.133333	NA	intron (NM_175931, intron 2 of 10)	CpG	13018	NR_135194	101927793	Hs.690953	NR_135194	ENSG00000259881	LOC101927793	-	uncharacterized LOC101927793	ncRNA
22.5666-2	chr7	54379954	54380203	+	0.133333	NA	Intergenic	L1MC1|LINE|L1	49381	NR_120515	102723605	Hs.154626	NR_120515	ENSG00000231427	LINC01445	-	long intergenic non-protein coding RNA 1445	ncRNA
29.6999	chr15	65384242	65384568	+	0.133333	NA	exon (NM_020962, exon 20 of 20)	exon (NM_020962, exon 20 of 20)	-6403	NM_004884	9543	Hs.128292	NM_004884	ENSG00000174498	IGDCC3	HsT18880|PUNC	immunoglobulin superfamily DCC subclass member 3	protein-coding
8.39998-2	chr6	17290167	17290247	+	0.133333	NA	intron (NM_153020, intron 2 of 2)	intron (NM_153020, intron 2 of 2)	7506	NM_153020	221662	Hs.519904	NM_153020	ENSG00000112183	RBM24	RNPC6|dJ259A10.1	RNA binding motif protein 24	protein-coding
34.5-6	chr2	123327262	123327562	+	0.133333	NA	Intergenic	L1MB1|LINE|L1	-253931	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
31.8666-7	chr4	56988323	56989069	+	0.133333	NA	intron (NM_001303268, intron 2 of 23)	intron (NM_001303268, intron 2 of 23)	9800	NM_000938	5431	Hs.602757	NM_000938	ENSG00000047315	POLR2B	POL2RB|RPB2|hRPB140	RNA polymerase II subunit B	protein-coding
18.1333-16	chr7	4136967	4137183	+	0.133333	NA	intron (NM_001079653, intron 2 of 19)	intron (NM_001079653, intron 2 of 19)	-2238	NR_158215	105375131		NR_158215		LOC105375131	-	uncharacterized LOC105375131	ncRNA
23.4-11	chr7	41264231	41264501	+	0.133333	NA	Intergenic	L2a|LINE|L2	162762	NR_110832	101928773	Hs.382363	NR_110832	ENSG00000224017	LINC01449	-	long intergenic non-protein coding RNA 1449	ncRNA
34.5666-5	chr6	122194126	122194493	+	0.133333	NA	Intergenic	L1PA16|LINE|L1	-205242	NM_001135564	3298	Hs.158195	NM_004506	ENSG00000025156	HSF2	HSF 2|HSTF 2	heat shock transcription factor 2	protein-coding
44.2999	chr1	83038384	83039013	+	0.133333	NA	intron (NR_147074, intron 5 of 10)	L1PA7|LINE|L1	-52490	NR_110633	101927498		NR_110632	ENSG00000236268	LINC01361	-	long intergenic non-protein coding RNA 1361	ncRNA
41.6-5	chr19	34304175	34304777	+	0.133333	NA	intron (NM_014686, intron 2 of 13)	AluSz|SINE|Alu	49922	NM_014686	9710	Hs.330073	NM_014686	ENSG00000166398	KIAA0355	-	KIAA0355	protein-coding
23.8666-4	chr5	25149093	25149295	+	0.133333	NA	intron (NR_147006, intron 3 of 4)	L1MA4|LINE|L1	41462	NR_147006	105374694		NR_147006	ENSG00000251273	LINC02228	-	long intergenic non-protein coding RNA 2228	ncRNA
43.5333-2	chr15	55316796	55317383	+	0.133333	NA	TTS (NM_001308423)	TTS (NM_001308423)	2034	NM_001308422	101928527	Hs.493512	NM_001308421	ENSG00000225973	PIGBOS1	HP06981	PIGB opposite strand 1	protein-coding
24.5333-4	chr14	83483380	83483733	+	0.133333	NA	Intergenic	Intergenic	840924	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
26.1666-5	chr7	76007488	76007843	+	0.133333	NA	intron (NM_001317787, intron 3 of 6)	AluJo|SINE|Alu	-13070	NM_001317803	83862	Hs.488835	NM_031925	ENSG00000189077	TMEM120A	NET29|TMPIT	transmembrane protein 120A	protein-coding
15.6667-5	chr3	24154084	24154308	+	0.133333	NA	intron (NM_001354708, intron 4 of 9)	intron (NM_001354708, intron 4 of 9)	2872	NR_121667	101927854	Hs.570625	NR_121667		LOC101927854	-	uncharacterized LOC101927854	ncRNA
19.9333-18	chr8	59954848	59955076	+	0.133333	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	326438	NM_001321837	767	Hs.654388	NM_004056	ENSG00000178538	CA8	CA-RP|CA-VIII|CALS|CAMRQ3|CARP	carbonic anhydrase 8	protein-coding
47.3999-3	chr9	36898367	36898784	+	0.133333	NA	intron (NR_103999, intron 6 of 8)	intron (NR_103999, intron 6 of 8)	-5044	NR_039687	100616456		NR_039687	ENSG00000265368	MIR4476	mir-4476	microRNA 4476	ncRNA
71.5666	chr7	77315960	77316847	+	0.133333	NA	intron (NM_001350898, intron 25 of 29)	intron (NM_001350898, intron 25 of 29)	-98795	NR_110073	101927243	Hs.547753	NR_110073		LOC101927243	-	uncharacterized LOC101927243	ncRNA
11.6-6	chr18	59431037	59431131	+	0.133333	NA	3' UTR (NM_133459, exon 11 of 11)	3' UTR (NM_133459, exon 11 of 11)	-71819	NM_005570	3998	Hs.465295	NM_005570	ENSG00000074695	LMAN1	ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58	lectin, mannose binding 1	protein-coding
20.5333-16	chr8	96133524	96133777	+	0.133333	NA	Intergenic	Intergenic	27156	NM_001001557	392255	Hs.492277	NM_001001557	ENSG00000156466	GDF6	BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|SGM1|SYNS4	growth differentiation factor 6	protein-coding
28.9333-8	chr2	191870073	191870340	+	0.133333	NA	Intergenic	Intergenic	-23118	NM_004657	8436	Hs.26530	NM_004657	ENSG00000168497	CAVIN2	PS-p68|SDPR|SDR|cavin-2	caveolae associated protein 2	protein-coding
31.9-6	chr7	107713739	107714298	+	0.133333	NA	intron (NM_000441, intron 20 of 20)	AluSz6|SINE|Alu	29614	NR_144536	101927974	Hs.432792	NR_144536	ENSG00000241764	LOC101927974	-	uncharacterized LOC101927974	ncRNA
42.4-2	chr18	79282395	79283004	+	0.133333	NA	intron (NR_148360, intron 14 of 31)	Tigger1|DNA|TcMar-Tigger	-113231	NM_172388	4772	Hs.534074	NM_006162	ENSG00000131196	NFATC1	NF-ATC|NF-ATc1.2|NFAT2|NFATc	nuclear factor of activated T cells 1	protein-coding
28.2	chr1	106200146	106200428	+	0.133333	NA	Intergenic	Intergenic	-172034	NR_146609	105378884	Hs.568533	NR_146609		LINC01677	-	long intergenic non-protein coding RNA 1677	ncRNA
45.5666	chr22	45747763	45748179	+	0.133333	NA	intron (NM_013236, intron 9 of 11)	AluJb|SINE|Alu	-12553	NR_039919	100616253		NR_039919	ENSG00000264160	MIR4762	-	microRNA 4762	ncRNA
42.9667-4	chr2	238410499	238410912	+	0.133333	NA	Intergenic	MER63D|DNA|hAT-Blackjack	-16222	NM_001330196	51665	Hs.516788	NM_016114	ENSG00000065802	ASB1	ASB-1	ankyrin repeat and SOCS box containing 1	protein-coding
24.2-3	chr14	50592392	50592880	+	0.133333	NA	intron (NM_015915, intron 4 of 13)	AluY|SINE|Alu	32611	NM_015915	51062	Hs.584905	NM_015915	ENSG00000198513	ATL1	AD-FSP|FSP1|GBP3|HSN1D|SPG3|SPG3A|atlastin1	atlastin GTPase 1	protein-coding
25.7666-2	chr16	53974628	53974974	+	0.133333	NA	intron (NM_001363988, intron 9 of 9)	intron (NM_001363988, intron 9 of 9)	-64592	NR_103838	100505692	Hs.664629	NR_103838		FTO-IT1	-	FTO intronic transcript 1	ncRNA
40.1333-10	chr7	40782076	40782475	+	0.133333	NA	intron (NM_024728, intron 14 of 14)	intron (NM_024728, intron 14 of 14)	197664	NR_110831	101928744	Hs.639767	NR_110831	ENSG00000232458	LINC01450	-	long intergenic non-protein coding RNA 1450	ncRNA
28.2333-7	chr20	13812874	13813414	+	0.133333	NA	intron (NR_147978, intron 9 of 11)	AluSx|SINE|Alu	28116	NR_147978	79133	Hs.472165	NM_024120	ENSG00000101247	NDUFAF5	C20orf7|MC1DN16|bA526K24.2|dJ842G6.1	NADH:ubiquinone oxidoreductase complex assembly factor 5	protein-coding
16.2-12	chr3	154535000	154535355	+	0.133333	NA	Intergenic	L1M8|LINE|L1	-104987	NM_001038705	344758	Hs.376338	NM_001038705	ENSG00000174948	GPR149	IEDA|PGR10|R35	G protein-coupled receptor 149	protein-coding
31.4-14	chr4	26582517	26582818	+	0.133333	NA	Intergenic	Intergenic	-1257	NM_001292054	55296	Hs.479403	NM_018317	ENSG00000109680	TBC1D19	-	TBC1 domain family member 19	protein-coding
19.6-15	chr5	155592624	155592801	+	0.133333	NA	Intergenic	Intergenic	578957	NM_001099293	285643	Hs.567824	NM_001099293	ENSG00000226650	KIF4B	-	kinesin family member 4B	protein-coding
17.0666-4	chr5	4543314	4543504	+	0.133333	NA	Intergenic	Intergenic	-230072	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA
27.1999-2	chr11	97669902	97670258	+	0.133333	NA	Intergenic	Intergenic	1161655	NR_135097	105369443	Hs.599377	NR_135097	ENSG00000256684	LINC02737	-	long intergenic non-protein coding RNA 2737	ncRNA
21.9-14	chr7	85003829	85004269	+	0.133333	NA	intron (NM_152754, intron 16 of 16)	L1M5|LINE|L1	117882	NM_152754	223117	Hs.201340	NM_152754	ENSG00000153993	SEMA3D	Sema-Z2|coll-2	semaphorin 3D	protein-coding
22.1333-5	chr11	107491110	107491362	+	0.133333	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-33390	NM_152434	143884	Hs.212140	NM_152434	ENSG00000152404	CWF19L2	-	CWF19 like cell cycle control factor 2	protein-coding
46.9667	chr10	76449286	76449790	+	0.133333	NA	intron (NM_001305581, intron 6 of 6)	intron (NM_001305581, intron 6 of 6)	-438506	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA
26.7333-14	chr7	37988810	37989188	+	0.133333	NA	Intergenic	Tigger6b|DNA|TcMar-Tigger	67680	NM_001242948	54749	Hs.563491	NM_017549	ENSG00000086289	EPDR1	EPDR|MERP-1|MERP1|UCC1	ependymin related 1	protein-coding
29.1333-7	chr3	44266710	44267015	+	0.133333	NA	intron (NM_001145030, intron 5 of 19)	Tigger1|DNA|TcMar-Tigger	24976	NM_001145030	375337	Hs.132125	NM_001145030	ENSG00000173769	TOPAZ1	C3orf77	testis and ovary specific PAZ domain containing 1	protein-coding
17.6-10	chr2	414746	414969	+	0.133333	NA	Intergenic	L1MA9|LINE|L1	77798	NR_146436	727944		NR_146436	ENSG00000223985	LINC01874	-	long intergenic non-protein coding RNA 1874	ncRNA
20.6333-12	chr7	20684931	20685162	+	0.133333	NA	intron (NM_178559, intron 6 of 18)	AluSz6|SINE|Alu	37716	NM_001163993	340273	Hs.404102	NM_178559	ENSG00000004846	ABCB5	ABCB5alpha|ABCB5beta|EST422562	ATP binding cassette subfamily B member 5	protein-coding
41.5332	chr15	59636409	59636748	+	0.133333	NA	Intergenic	L1PA10|LINE|L1	20727	NM_001320929	2958	Hs.512934	NM_004492	ENSG00000140307	GTF2A2	HsT18745|T18745|TF2A2|TFIIA|TFIIA-12|TFIIA-gamma|TFIIAS	general transcription factor IIA subunit 2	protein-coding
38.7333-11	chr7	41943465	41944029	+	0.133333	NA	Intergenic	Intergenic	-240657	NM_002192	3624	Hs.28792	NM_002192	ENSG00000122641	INHBA	EDF|FRP	inhibin subunit beta A	protein-coding
17.0666-3	chr3	46030570	46030716	+	0.133333	NA	Intergenic	MER52D|LTR|ERV1	-3160	NM_005283	2829	Hs.128375	NM_005283	ENSG00000173578	XCR1	CCXCR1|GPR5	X-C motif chemokine receptor 1	protein-coding
17.1333-21	chr8	99189696	99189934	+	0.133333	NA	intron (NM_017890, intron 16 of 61)	L1MEc|LINE|L1	176549	NM_015243	157680	Hs.191540	NM_015243	ENSG00000132549	VPS13B	CHS1|COH1	vacuolar protein sorting 13 homolog B	protein-coding
15.3333-3	chr14	37751318	37751489	+	0.133333	NA	intron (NM_001310135, intron 15 of 32)	intron (NM_001310135, intron 15 of 32)	-20980	NM_001368142	319089	Hs.659936	NM_001007795	ENSG00000139865	TTC6	C14orf25|NCRNA00291	tetratricopeptide repeat domain 6	protein-coding
22.6666-2	chr15	79134027	79134400	+	0.133333	NA	Intergenic	AluYk3|SINE|Alu	-43433	NM_002891	5923	Hs.459035	NM_002891	ENSG00000058335	RASGRF1	CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1	Ras protein specific guanine nucleotide releasing factor 1	protein-coding
30.8666-4	chr5	169033245	169033768	+	0.133333	NA	intron (NR_109897, intron 3 of 4)	L1MA9|LINE|L1	20279	NR_109897	728095	Hs.145601	NR_109897		LOC728095	-	uncharacterized LOC728095	ncRNA
19.2333-14	chr7	90448849	90449135	+	0.133333	NA	Intergenic	L1MA8|LINE|L1	-20647	NM_001365443	102723899	Hs.731917	NM_001365443		LOC102723899	-	uncharacterized LOC102723899	protein-coding
36.3999-3	chr16	82797448	82797809	+	0.133333	NA	intron (NR_110938, intron 1 of 2)	intron (NR_110938, intron 1 of 2)	24309	NR_110938	101928446	Hs.684007	NR_110938	ENSG00000260862	LOC101928446	-	uncharacterized LOC101928446	ncRNA
19.6-5	chr15	58759106	58759378	+	0.133333	NA	Intergenic	Intergenic	-9535	NM_001320570	102	Hs.172028	NM_001110	ENSG00000137845	ADAM10	AD10|AD18|CD156c|CDw156|HsT18717|MADM|RAK|kuz	ADAM metallopeptidase domain 10	protein-coding
26.8666	chr10	66286765	66287044	+	0.133333	NA	intron (NM_001127384, intron 12 of 17)	intron (NM_001127384, intron 12 of 17)	-639132	NM_178011	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding
22.5999	chr12	98332134	98332303	+	0.133333	NA	Intergenic	AluSz6|SINE|Alu	124927	NR_033801	121456	Hs.620643	NR_033801	ENSG00000227825	SLC9A7P1	-	solute carrier family 9 member 7 pseudogene 1	pseudo
41.2-7	chr9	135879030	135879525	+	0.133333	NA	intron (NM_015447, intron 3 of 16)	intron (NM_015447, intron 3 of 16)	28269	NM_015447	157922	Hs.522493	NM_015447	ENSG00000130559	CAMSAP1	-	calmodulin regulated spectrin associated protein 1	protein-coding
27.6-6	chr2	110869735	110870301	+	0.133333	NA	intron (NM_001371254, intron 10 of 18)	intron (NM_001371254, intron 10 of 18)	137445	NM_001365487	55289	Hs.253320	NM_018308	ENSG00000153093	ACOXL	-	acyl-CoA oxidase like	protein-coding
54.8999	chr14	51202685	51203300	+	0.133333	NA	Intergenic	L1P4d|LINE|L1	-37255	NM_030755	81542	Hs.125221	NM_030755	ENSG00000139921	TMX1	PDIA11|TMX|TXNDC|TXNDC1	thioredoxin related transmembrane protein 1	protein-coding
37.2-8	chr5	4494673	4495075	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-278607	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA
28.0333-11	chr9	23449359	23449986	+	0.133333	NA	Intergenic	Intergenic	222727	NR_121602	101929563	Hs.533220	NR_121602	ENSG00000283982	LOC101929563	-	uncharacterized LOC101929563	ncRNA
33.4667-2	chr16	57076564	57076992	+	0.133333	NA	intron (NM_001330552, intron 38 of 47)	intron (NM_001330552, intron 38 of 47)	-15805	NM_152727	221184	Hs.339809	NM_152727	ENSG00000140848	CPNE2	COPN2|CPN2	copine 2	protein-coding
27.2-10	chr5	33494396	33494759	+	0.133333	NA	Intergenic	L1ME4b|LINE|L1	53801	NM_152295	6897	Hs.481860	NM_152295	ENSG00000113407	TARS	ThrRS	threonyl-tRNA synthetase	protein-coding
37.1333-4	chr12	67507556	67508050	+	0.133333	NA	Intergenic	L1ME3C|LINE|L1	-12279	NR_103861	100507175	Hs.505986	NR_103861	ENSG00000203585	LINC02408	-	long intergenic non-protein coding RNA 2408	ncRNA
34.9333	chr11	45519593	45519976	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	145838	NM_003654	8534	Hs.104576	NM_003654	ENSG00000175264	CHST1	C6ST|GST-1|KS6ST|KSGal6ST|KSST	carbohydrate sulfotransferase 1	protein-coding
18.6-14	chr21	19447116	19447388	+	0.133333	NA	Intergenic	Intergenic	452503	NR_146910	105372746	Hs.580899	NR_146910	ENSG00000233480	LINC01683	C21orf40	long intergenic non-protein coding RNA 1683	ncRNA
47.1-3	chr2	108066133	108066605	+	0.133333	NA	Intergenic	Intergenic	-13614	NR_135071	107178918		NR_135071	ENSG00000231221	LINC01593	-	long intergenic non-protein coding RNA 1593	ncRNA
37.5332	chr1	20718220	20718535	+	0.133333	NA	promoter-TSS (NM_001287212)	promoter-TSS (NM_001287212)	-370	NM_020816	57576	Hs.130411	NM_020816	ENSG00000117245	KIF17	KIF17B|KIF3X|KLP-2|OSM-3	kinesin family member 17	protein-coding
22.0667-3	chr14	67555847	67556140	+	0.133333	NA	intron (NM_020715, intron 3 of 28)	intron (NM_020715, intron 3 of 28)	-22143	NM_001348546	161145	Hs.509707	NM_182526	ENSG00000198133	TMEM229B	C14orf83	transmembrane protein 229B	protein-coding
26.9333-7	chr15	69743094	69743491	+	0.133333	NA	Intergenic	Intergenic	-91942	NR_026764	414926	Hs.569502	NR_026764	ENSG00000245750	LINC00593	C15orf50	long intergenic non-protein coding RNA 593	ncRNA
11.5333-7	chr8	20649983	20650150	+	0.133333	NA	Intergenic	Intergenic	-35140	NR_145737	109616983		NR_145737		SNORD3F	-	small nucleolar RNA, C/D box 3F	snoRNA
18.2333-10	chr4	139105797	139105980	+	0.133333	NA	intron (NM_001371336, intron 4 of 8)	AluJr|SINE|Alu	-21474	NM_001276457	1998	Hs.634040	NM_006874	ENSG00000109381	ELF2	EU32|NERF|NERF-1A|NERF-1B|NERF-1a,b|NERF-2	E74 like ETS transcription factor 2	protein-coding
23.8333-3	chr21	25590748	25591061	+	0.133333	NA	intron (NM_080794, intron 8 of 10)	L1MD1|LINE|L1	-7680	NR_024092	282566	Hs.384586	NR_024092	ENSG00000260583	LINC00515	C21orf71|PRED21	long intergenic non-protein coding RNA 515	ncRNA
18.4666-5	chr4	138037152	138037362	+	0.133333	NA	intron (NR_037866, intron 8 of 10)	MER41B|LTR|ERV1	-51757	NR_038380	641364	Hs.570846	NR_038380	ENSG00000250033	SLC7A11-AS1	-	SLC7A11 antisense RNA 1	ncRNA
33.1333-2	chr12	17753051	17753542	+	0.133333	NA	Intergenic	L1P1|LINE|L1	79997	NR_039770	100616279		NR_039770	ENSG00000283665	MIR3974	-	microRNA 3974	ncRNA
22.6666-5	chr8	86011540	86011827	+	0.133333	NA	Intergenic	MLT1F|LTR|ERVL-MaLR	57985	NM_033126	85481	Hs.566854	NM_033126	ENSG00000147613	PSKH2	-	protein serine kinase H2	protein-coding
24.5666-5	chr3	107377836	107378127	+	0.133333	NA	exon (NM_032600, exon 1 of 1)	exon (NM_032600, exon 1 of 1)	542	NM_032600	84692	Hs.164799	NM_032600	ENSG00000138483	CCDC54	NYD-SP17|SP17	coiled-coil domain containing 54	protein-coding
28.4-16	chr9	88774678	88775088	+	0.133333	NA	Intergenic	Intergenic	-28978	NR_036252	100423015		NR_036252	ENSG00000265873	MIR4289	-	microRNA 4289	ncRNA
20.5666-3	chr4	182299196	182299416	+	0.133333	NA	intron (NM_001080477, intron 1 of 27)	intron (NM_001080477, intron 1 of 27)	55904	NM_001080477	55714	Hs.130438	NM_001080477	ENSG00000218336	TENM3	MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3	teneurin transmembrane protein 3	protein-coding
30.4667-2	chr1	168695464	168695903	+	0.133333	NA	3' UTR (NM_001937, exon 4 of 4)	3' UTR (NM_001937, exon 4 of 4)	33523	NM_001937	1805	Hs.80552	NM_001937	ENSG00000143196	DPT	TRAMP	dermatopontin	protein-coding
24.2-5	chr3	184820214	184820537	+	0.133333	NA	intron (NM_001349295, intron 1 of 46)	MLT1D|LTR|ERVL-MaLR	7868	NR_146115	23355	Hs.269263	NM_015303	ENSG00000156931	VPS8	KIAA0804	VPS8 subunit of CORVET complex	protein-coding
19-21	chr7	25985121	25985345	+	0.133333	NA	Intergenic	L2a|LINE|L2	-35247	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA
44.8999	chr12	33574119	33574676	+	0.133333	NA	Intergenic	Intergenic	-134578	NM_198992	341359	Hs.118703	NM_198992	ENSG00000110975	SYT10	-	synaptotagmin 10	protein-coding
25.5666	chr1	154033614	154033990	+	0.133333	NA	intron (NM_001159484, intron 27 of 37)	L1MA3|LINE|L1	43040	NM_001030	6232	Hs.546291	NM_001030	ENSG00000177954	RPS27	DBA17|MPS-1|MPS1|S27	ribosomal protein S27	protein-coding
36.6999	chr2	20035932	20036273	+	0.133333	NA	intron (NM_014713, intron 4 of 6)	intron (NM_014713, intron 4 of 6)	15526	NM_014713	9741	Hs.467807	NM_014713	ENSG00000068697	LAPTM4A	HUMORF13|LAPTM4|MBNT|Mtrp	lysosomal protein transmembrane 4 alpha	protein-coding
22.0333-7	chr21	18286042	18286395	+	0.133333	NA	intron (NM_002772, intron 21 of 24)	L2a|LINE|L2	40343	NM_001204174	140578	Hs.283725	NM_024944	ENSG00000154645	CHODL	C21orf68|MT75|PRED12	chondrolectin	protein-coding
21.1333	chr1	78256710	78256875	+	0.133333	NA	intron (NR_027310, intron 3 of 5)	intron (NR_027310, intron 3 of 5)	27193	NR_027310	149047	Hs.352665	NM_144700	ENSG00000237413	MGC27382	-	uncharacterized MGC27382	ncRNA
27.4333-8	chr19	49393800	49394128	+	0.133333	NA	intron (NM_144688, intron 2 of 19)	intron (NM_144688, intron 2 of 19)	5715	NM_144688	147872	Hs.662085	NM_144688	ENSG00000161609	CCDC155	KASH5	coiled-coil domain containing 155	protein-coding
25.0666-3	chr4	29555570	29555779	+	0.133333	NA	Intergenic	Intergenic	341382	NR_146996	105374561	Hs.582013	NR_146996	ENSG00000248338	LINC02472	-	long intergenic non-protein coding RNA 2472	ncRNA
12.7666	chr17	71304475	71304632	+	0.133333	NA	Intergenic	L1PBa|LINE|L1	-102374	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility 17	ncRNA
25.1333-8	chr16	74146063	74146328	+	0.133333	NA	Intergenic	MER115|DNA|hAT-Tip100	69326	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA
26.1666	chr10	13993549	13993854	+	0.133333	NA	intron (NM_018027, intron 2 of 24)	L4_C_Mam|LINE|RTE-X	14849	NM_001318336	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding
16.1666	chr3	189875231	189875370	+	0.133333	NA	intron (NM_003722, intron 10 of 13)	AluSx4|SINE|Alu	45378	NR_030642	100126340		NR_030642	ENSG00000216058	MIR944	MIRN944|hsa-mir-944|mir-944	microRNA 944	ncRNA
57.2665	chr4	57285808	57286287	+	0.133333	NA	Intergenic	Intergenic	-139825	NR_125907	101928851	Hs.555072	NR_125907	ENSG00000248505	LINC02380	-	long intergenic non-protein coding RNA 2380	ncRNA
24.5666	chr11	108431561	108432087	+	0.133333	NA	exon (NM_152587, exon 3 of 9)	exon (NM_152587, exon 3 of 9)	35705	NM_001330368	160140	Hs.653180	NM_152587	ENSG00000166323	C11orf65	-	chromosome 11 open reading frame 65	protein-coding
14.1333-12	chr7	136741734	136741885	+	0.133333	NA	Intergenic	LTR16E1|LTR|ERVL	-126843	NM_001006627	1129	Hs.535891	NM_000739	ENSG00000181072	CHRM2	HM2	cholinergic receptor muscarinic 2	protein-coding
38.7333-7	chr22	17161924	17162488	+	0.133333	NA	intron (NR_024483, intron 1 of 1)	MLT1F1|LTR|ERVL-MaLR	2817	NR_024483	100130717	Hs.660066	NR_024482	ENSG00000185837	HDHD5-AS1	CECR4|CECR5-AS1|NCRNA00017	HDHD5 antisense RNA 1	ncRNA
30.5666-2	chr5	150115233	150115765	+	0.133333	NA	3' UTR (NM_001355017, exon 23 of 23)	3' UTR (NM_001355017, exon 23 of 23)	-2127	NM_005211	1436	Hs.586219	NM_005211	ENSG00000182578	CSF1R	C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R	colony stimulating factor 1 receptor	protein-coding
8.23331	chr6	87075870	87075931	+	0.133333	NA	Intergenic	Intergenic	19206	NM_000735	1081	Hs.119689	NM_000735	ENSG00000135346	CGA	CG-ALPHA|FSHA|GPA1|GPHA1|GPHa|HCG|LHA|TSHA	glycoprotein hormones, alpha polypeptide	protein-coding
42.4-9	chr7	125301428	125301891	+	0.133333	NA	intron (NR_110188, intron 3 of 8)	intron (NR_110188, intron 3 of 8)	-37368	NR_110182	101928254	Hs.571236	NR_110182	ENSG00000219445	LOC101928254	-	uncharacterized LOC101928254	ncRNA
24.8-8	chr5	164661006	164661499	+	0.133333	NA	Intergenic	Intergenic	190973	NR_105065	102546299	Hs.437730	NR_105065	ENSG00000241956	LOC102546299	-	uncharacterized LOC102546299	ncRNA
48.2667-2	chr9	26686903	26687638	+	0.133333	NA	Intergenic	L3b|LINE|CR1	205532	NM_024828	79886	Hs.178357	NM_024828	ENSG00000120159	CAAP1	C9orf82|CAAP	caspase activity and apoptosis inhibitor 1	protein-coding
44.5332	chr6	131732281	131732764	+	0.133333	NA	intron (NR_133007, intron 20 of 23)	AluSx1|SINE|Alu	-21505	NM_001145659	643854	Hs.632613	NM_001145659	ENSG00000236761	CTAGE9	-	CTAGE family member 9	protein-coding
37.0666-5	chr9	38635994	38636614	+	0.133333	NA	Intergenic	L1MEg|LINE|L1	15216	NR_027294	158228	Hs.632652	NR_027294		FAM201A	C9orf122	family with sequence similarity 201 member A	ncRNA
24.8667-5	chr15	89241156	89241493	+	0.133333	NA	Intergenic	AluSc|SINE|Alu	-2639	NM_001113378	55215	Hs.513126	NM_018193	ENSG00000140525	FANCI	KIAA1794	FA complementation group I	protein-coding
33.1666-2	chr12	40819129	40819571	+	0.133333	NA	intron (NM_001256063, intron 1 of 15)	L1PA10|LINE|L1	-8588	NM_001256064	1272	Hs.143434	NM_001843	ENSG00000018236	CNTN1	F3|GP135|MYPCN	contactin 1	protein-coding
50.8666-2	chr5	159115699	159116121	+	0.133333	NA	non-coding (NR_109890, exon 3 of 3)	non-coding (NR_109890, exon 3 of 3)	15427	NR_109890	101927740	Hs.738721	NR_109890	ENSG00000245812	LINC02202	-	long intergenic non-protein coding RNA 2202	ncRNA
32.3-2	chr18	57852407	57852859	+	0.133333	NA	Intergenic	AluSz|SINE|Alu	-49318	NM_005603	5205	Hs.216623	NM_005603	ENSG00000081923	ATP8B1	ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1	ATPase phospholipid transporting 8B1	protein-coding
26.4-9	chr4	185433939	185434264	+	0.133333	NA	intron (NM_001114357, intron 2 of 6)	AluJo|SINE|Alu	4767	NM_001346007	441054	Hs.549398	NM_001114357	ENSG00000205129	C4orf47	-	chromosome 4 open reading frame 47	protein-coding
47.6666-2	chr12	58597040	58597521	+	0.133333	NA	intron (NR_126341, intron 1 of 1)	MIRc|SINE|MIR	5578	NR_126341	100506869	Hs.290456	NR_126341	ENSG00000258231	LOC100506869	-	uncharacterized LOC100506869	ncRNA
42.1333	chr3	57959474	57959885	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-48743	NM_001164318	2317	Hs.476448	NM_001457	ENSG00000136068	FLNB	ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP	filamin B	protein-coding
20.9333-15	chr7	73390585	73390791	+	0.133333	NA	Intergenic	AluSx1|SINE|Alu	-43090	NM_003508	8326	Hs.647029	NM_003508	ENSG00000188763	FZD9	CD349|FZD3	frizzled class receptor 9	protein-coding
19.2333-8	chr20	56484753	56484897	+	0.133333	NA	intron (NM_001283036, intron 5 of 8)	intron (NM_001283036, intron 5 of 8)	16240	NM_001283037	51507	Hs.517134	NM_016407	ENSG00000022277	RTF2	C20orf43|CDAO5|HSPC164|RTFDC1|SHUJUN-3	replication termination factor 2	protein-coding
22.7666-2	chr11	113178644	113178852	+	0.133333	NA	intron (NM_181351, intron 1 of 18)	intron (NM_181351, intron 1 of 18)	95153	NR_034101	100288346	Hs.661826	NR_034101	ENSG00000227487	NCAM1-AS1	-	NCAM1 antisense RNA1	ncRNA
26.2333-4	chr1	231672784	231673201	+	0.133333	NA	intron (NM_001164556, intron 1 of 4)	intron (NM_001164556, intron 1 of 4)	46177	NM_001164556	27185	Hs.13318	NM_018662	ENSG00000162946	DISC1	C1orf136|SCZD9	DISC1 scaffold protein	protein-coding
24.4-5	chr10	101942249	101942773	+	0.133333	NA	intron (NM_024541, intron 22 of 25)	intron (NM_024541, intron 22 of 25)	-98591	NM_173192	30819	Hs.97044	NM_014591	ENSG00000120049	KCNIP2	KCHIP2	potassium voltage-gated channel interacting protein 2	protein-coding
28.9333	chr1	12247022	12247281	+	0.133333	NA	intron (NM_015378, intron 5 of 69)	intron (NM_015378, intron 5 of 69)	17121	NM_018156	55187	Hs.439381	NM_015378	ENSG00000048707	VPS13D	SCAR4	vacuolar protein sorting 13 homolog D	protein-coding
45.4666-2	chr8	29680676	29681350	+	0.133333	NA	Intergenic	Intergenic	67096	NR_026765	619351	Hs.566911	NR_026765	ENSG00000251191	LINC00589	C8orf75|TSLNC8	long intergenic non-protein coding RNA 589	ncRNA
19.2666-3	chr8	112319464	112319648	+	0.133333	NA	intron (NM_001363185, intron 42 of 66)	intron (NM_001363185, intron 42 of 66)	-323937	NR_031745	100302225		NR_031745	ENSG00000238399	MIR2053	hsa-mir-2053	microRNA 2053	ncRNA
12.8666	chr10	36925687	36925783	+	0.133333	NA	Intergenic	Intergenic	-200122	NM_052997	91074	Hs.373787	NM_052997	ENSG00000148513	ANKRD30A	NY-BR-1	ankyrin repeat domain 30A	protein-coding
16.5-7	chr22	25819599	25819789	+	0.133333	NA	intron (NM_001318245, intron 12 of 43)	MER113|DNA|hAT-Charlie	77506	NM_001318245	84700	Hs.417959	NM_032608	ENSG00000133454	MYO18B	KFS4	myosin XVIIIB	protein-coding
33.2999	chr22	28029051	28029413	+	0.133333	NA	intron (NM_001145418, intron 13 of 22)	intron (NM_001145418, intron 13 of 22)	-108620	NR_036169	100423034		NR_036169	ENSG00000264073	MIR3199-1	mir-3199-1	microRNA 3199-1	ncRNA
32	chr1	175729261	175729563	+	0.133333	NA	intron (NM_003285, intron 1 of 22)	intron (NM_003285, intron 1 of 22)	14183	NM_001328635	7143	Hs.659864	NM_003285	ENSG00000116147	TNR	TN-R	tenascin R	protein-coding
19.8-8	chr2	67751681	67751830	+	0.133333	NA	Intergenic	Intergenic	73807	NR_110271	101927701	Hs.348697	NR_110271	ENSG00000237013	LINC01812	-	long intergenic non-protein coding RNA 1812	ncRNA
29	chr1	185871357	185871690	+	0.133333	NA	intron (NM_031935, intron 4 of 106)	intron (NM_031935, intron 4 of 106)	137132	NM_031935	83872	Hs.58877	NM_031935	ENSG00000143341	HMCN1	ARMD1|FBLN6|FIBL-6|FIBL6	hemicentin 1	protein-coding
13-9	chr7	20116071	20116209	+	0.133333	NA	intron (NR_110114, intron 1 of 5)	intron (NR_110114, intron 1 of 5)	24286	NR_110114	101927668	Hs.715900	NR_110114		LOC101927668	-	uncharacterized LOC101927668	ncRNA
17.8333-2	chr10	129493216	129493385	+	0.133333	NA	intron (NM_002412, intron 1 of 4)	intron (NM_002412, intron 1 of 4)	26059	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding
53.0332	chr3	59747781	59748351	+	0.133333	NA	non-coding (NR_135491, exon 7 of 7)	non-coding (NR_135491, exon 7 of 7)	-89569	NR_149028	339902	Hs.132446	NR_149028		LOC339902	-	hCG1813818	ncRNA
38.4666-2	chr10	54930946	54931289	+	0.133333	NA	intron (NM_001354404, intron 3 of 34)	intron (NM_001354404, intron 3 of 34)	-129826	NM_001142767	65217	Hs.280209	NM_033056	ENSG00000150275	PCDH15	CDHR15|DFNB23|USH1F	protocadherin related 15	protein-coding
42.7666-2	chr3	121690364	121690842	+	0.133333	NA	intron (NM_001256486, intron 14 of 21)	intron (NM_001256486, intron 14 of 21)	-29700	NM_001292041	3059	Hs.14601	NM_005335	ENSG00000180353	HCLS1	CTTNL|HS1|lckBP1|p75	hematopoietic cell-specific Lyn substrate 1	protein-coding
23.8666-6	chr7	3051635	3051900	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-7900	NM_032415	84433	Hs.648101	NM_032415	ENSG00000198286	CARD11	BENTA|BIMP3|CARMA1|IMD11|IMD11A|PPBL	caspase recruitment domain family member 11	protein-coding
7.93332	chr2	40051727	40051796	+	0.133333	NA	intron (NR_038441, intron 2 of 4)	MIRb|SINE|MIR	134127	NR_038441	100128590	Hs.744988	NR_038441	ENSG00000227028	SLC8A1-AS1	-	SLC8A1 antisense RNA 1	ncRNA
30.6-10	chr6	161432901	161433222	+	0.133333	NA	intron (NM_004562, intron 9 of 11)	Charlie2a|DNA|hAT-Charlie	-37916	NR_134593	105378098	Hs.691066	NR_134593		LOC105378098	-	uncharacterized LOC105378098	ncRNA
36.5332	chr6	37881389	37881702	+	0.133333	NA	intron (NM_021943, intron 1 of 5)	intron (NM_021943, intron 1 of 5)	61818	NM_021943	60685	Hs.36959	NM_021943	ENSG00000156639	ZFAND3	TEX27	zinc finger AN1-type containing 3	protein-coding
25.0667-2	chr1	236754178	236754481	+	0.133333	NA	intron (NM_001278344, intron 18 of 22)	intron (NM_001278344, intron 18 of 22)	-40952	NM_000254	4548	Hs.498187	NM_000254	ENSG00000116984	MTR	HMAG|MS|cblG	5-methyltetrahydrofolate-homocysteine methyltransferase	protein-coding
32.0333-9	chr8	125273089	125273494	+	0.133333	NA	intron (NM_001349486, intron 5 of 7)	intron (NM_001349486, intron 5 of 7)	-157067	NM_025195	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding
15.3333-6	chr2	24139493	24139657	+	0.133333	NA	intron (NM_001145710, intron 5 of 10)	intron (NM_001145710, intron 5 of 10)	16106	NM_001145710	375190	Hs.710370	NM_198553	ENSG00000219626	FAM228B	-	family with sequence similarity 228 member B	protein-coding
22.3666	chr4	92166100	92166267	+	0.133333	NA	Intergenic	L1PA17|LINE|L1	111119	NR_125920	101929194	Hs.626389	NR_125920		LNCPRESS2	-	lncRNA p53 regulated and ESC associated 2	ncRNA
18.4-14	chr9	112235372	112235562	+	0.133333	NA	intron (NM_001244896, intron 6 of 12)	intron (NM_001244896, intron 6 of 12)	-60170	NM_001282643	64420	Hs.494827	NM_022486	ENSG00000106868	SUSD1	-	sushi domain containing 1	protein-coding
22.4667-10	chr6	128773114	128773407	+	0.133333	NA	Intergenic	L1MEd|LINE|L1	-109878	NM_001079823	3908	Hs.200841	NM_000426	ENSG00000196569	LAMA2	LAMM|MDC1A	laminin subunit alpha 2	protein-coding
21.7-6	chr20	45458481	45458775	+	0.133333	NA	Intergenic	AluSg4|SINE|Alu	-11125	NM_006103	10406	Hs.2719	NM_006103	ENSG00000101443	WFDC2	EDDM4|HE4|WAP5|dJ461P17.6	WAP four-disulfide core domain 2	protein-coding
23.7667-6	chr14	48831993	48832266	+	0.133333	NA	Intergenic	Intergenic	754251	NM_001030001	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29|uS14	ribosomal protein S29	protein-coding
25.0333-12	chrX	150202537	150202760	+	0.133333	NA	Intergenic	Intergenic	-25356	NR_031748	100313839		NR_031748	ENSG00000252454	MIR2114	-	microRNA 2114	ncRNA
24.5333	chr11	65250136	65250320	+	0.133333	NA	Intergenic	AluSx|SINE|Alu	-11734	NM_002689	23649	Hs.201897	NM_002689	ENSG00000014138	POLA2	-	DNA polymerase alpha 2, accessory subunit	protein-coding
45.7333-2	chr10	82417578	82418221	+	0.133333	NA	intron (NR_163253, intron 3 of 10)	L2b|LINE|L2	-184979	NR_120666	101929590	Hs.733268	NR_120666	ENSG00000225738	NRG3-AS1	C10orf100|Em:AC010157.1	NRG3 antisense RNA 1	ncRNA
12.9333-6	chr2	178787263	178787403	+	0.133333	NA	intron (NM_133379, intron 13 of 45)	intron (NM_133379, intron 13 of 45)	10407	NR_120594	101927055	Hs.570275	NR_120594	ENSG00000237298	LOC101927055	-	uncharacterized LOC101927055	ncRNA
59.5666	chr12	114422350	114423212	+	0.133333	NA	Intergenic	MLT1H|LTR|ERVL-MaLR	-14339	NM_000192	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box transcription factor 5	protein-coding
31.2-11	chr22	22185217	22185524	+	0.133333	NA	Intergenic	AluJb|SINE|Alu	-59416	NM_007128	7441	Hs.247979	NM_007128	ENSG00000169575	VPREB1	CD179a|IGI|IGVPB|VPREB	V-set pre-B cell surrogate light chain 1	protein-coding
46.6332	chr9	102501281	102501774	+	0.133333	NA	Intergenic	HAL1|LINE|L1	-18110	NR_103830	414319	Hs.385790	NR_103830	ENSG00000204250	LINC00587	C9orf107|bA785H23.1	long intergenic non-protein coding RNA 587	ncRNA
31.8667-5	chr2	166780438	166780844	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	-107846	NM_152381	129446	Hs.73680	NM_152381	ENSG00000163092	XIRP2	CMYA3	xin actin binding repeat containing 2	protein-coding
41.9999-3	chr5	27709668	27710047	+	0.133333	NA	Intergenic	Intergenic	237565	NR_038848	643401	Hs.533212	NR_038848	ENSG00000250337	PURPL	LINC01021	p53 upregulated regulator of p53 levels	ncRNA
30-4	chr11	79149341	79149687	+	0.133333	NA	intron (NM_001098816, intron 3 of 33)	L1M5|LINE|L1	252595	NR_030598	100126333		NR_030598	ENSG00000211997	MIR708	MIRN708|hsa-mir-708	microRNA 708	ncRNA
37.3333-3	chr20	51129440	51129890	+	0.133333	NA	Intergenic	L1ME3G|LINE|L1	-106558	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding
44.0666-5	chr4	164040563	164041097	+	0.133333	NA	intron (NM_001166373, intron 2 of 7)	intron (NM_001166373, intron 2 of 7)	156881	NM_012403	23520	Hs.661161	NM_012403		ANP32C	PP32R1	acidic nuclear phosphoprotein 32 family member C	protein-coding
23.6-19	chr8	81413826	81414165	+	0.133333	NA	Intergenic	L1PA12|LINE|L1	33444	NM_002677	5375	Hs.571512	NM_002677	ENSG00000147588	PMP2	CMT1G|FABP8|M-FABP|MP2|P2	peripheral myelin protein 2	protein-coding
58.0666	chr4	143328643	143329342	+	0.133333	NA	Intergenic	Intergenic	-7884	NM_002039	2549	Hs.80720	NM_002039	ENSG00000109458	GAB1	DFNB26	GRB2 associated binding protein 1	protein-coding
19.8333-13	chr5	110416183	110416331	+	0.133333	NA	Intergenic	Intergenic	97658	NR_031644	100302159		NR_031644	ENSG00000221436	MIR548F3	MIR548F-3|MIRN548F3|hsa-mir-548f-3	microRNA 548f-3	ncRNA
38.0666-5	chr21	16270942	16271310	+	0.133333	NA	intron (NR_027790, intron 4 of 7)	MLT1A1|LTR|ERVL-MaLR	13642	NR_145757	109617014		NR_145757	ENSG00000201025	SNORD74B	-	small nucleolar RNA, C/D box 74B	snoRNA
43.4999	chr11	26688191	26688536	+	0.133333	NA	intron (NM_178498, intron 9 of 14)	L1M6|LINE|L1	33697	NM_178498	159963	Hs.148907	NM_178498	ENSG00000148942	SLC5A12	SMCT2	solute carrier family 5 member 12	protein-coding
23.3333-11	chr5	148833971	148834236	+	0.133333	NA	Intergenic	Intergenic	7510	NM_000024	154	Hs.2551	NM_000024	ENSG00000169252	ADRB2	ADRB2R|ADRBR|B2AR|BAR|BETA2AR	adrenoceptor beta 2	protein-coding
12.1-11	chr7	104585622	104585712	+	0.133333	NA	intron (NM_199000, intron 1 of 2)	intron (NM_199000, intron 1 of 2)	218425	NR_034142	645591	Hs.658835	NR_034141	ENSG00000226869	LHFPL3-AS1	-	LHFPL3 antisense RNA 1	ncRNA
46.6-3	chr14	58298620	58299155	+	0.133333	NA	promoter-TSS (NR_029434)	promoter-TSS (NR_029434)	332	NM_002892	5926	Hs.161000	NM_002892	ENSG00000032219	ARID4A	RBBP-1|RBBP1|RBP-1|RBP1	AT-rich interaction domain 4A	protein-coding
28.6333-12	chr6	145043589	145044073	+	0.133333	NA	Intergenic	Intergenic	638176	NR_132778	106635530		NR_132778		SNORA98	-	small nucleolar RNA, H/ACA box 98	snoRNA
18.0667-3	chr12	121470125	121470360	+	0.133333	NA	intron (NM_001005366, intron 12 of 22)	intron (NM_001005366, intron 12 of 22)	-25890	NR_106957	102465665		NR_106957	ENSG00000284402	MIR7107	hsa-mir-7107	microRNA 7107	ncRNA
21.8-10	chr3	185371980	185372220	+	0.133333	NA	intron (NM_004721, intron 1 of 13)	intron (NM_004721, intron 1 of 13)	8964	NM_004721	9175	Hs.591306	NM_004721	ENSG00000073803	MAP3K13	LZK|MEKK13|MLK	mitogen-activated protein kinase kinase kinase 13	protein-coding
26.4-2	chr10	65029847	65030340	+	0.133333	NA	Intergenic	MER44A|DNA|TcMar-Tigger	-105575	NR_134456	101928887	Hs.463900	NR_134456	ENSG00000224714	LINC02671	-	long intergenic non-protein coding RNA 2671	ncRNA
15.4-6	chr11	17880229	17880362	+	0.133333	NA	intron (NR_104041, intron 8 of 9)	intron (NR_104041, intron 8 of 9)	132752	NR_104040	26297	Hs.32470	NM_012139	ENSG00000129158	SERGEF	DELGEF|Gnefr	secretion regulating guanine nucleotide exchange factor	protein-coding
41.2999-3	chr18	34262415	34262883	+	0.133333	NA	Intergenic	Intergenic	-39098	NM_001353232	8715	Hs.514795	NM_003787	ENSG00000101746	NOL4	CT125|HRIHFB2255|NOLP	nucleolar protein 4	protein-coding
18.2666	chr8	106965411	106965564	+	0.133333	NA	Intergenic	Intergenic	-195243	NM_139166	137735	Hs.374668	NM_139166	ENSG00000174429	ABRA	STARS	actin binding Rho activating protein	protein-coding
16.8-6	chr3	66220384	66220587	+	0.133333	NA	promoter-TSS (NM_001164796)	promoter-TSS (NM_001164796)	-257	NR_028475	115286	Hs.379386	NM_173471	ENSG00000144741	SLC25A26	COXPD28|SAMC	solute carrier family 25 member 26	protein-coding
14.1667-3	chr14	32542660	32542854	+	0.133333	NA	intron (NM_004274, intron 3 of 13)	L2b|LINE|L2	213459	NM_004274	9472	Hs.509083	NM_004274	ENSG00000151320	AKAP6	ADAP100|ADAP6|AKAP100|PRKA6|mAKAP	A-kinase anchoring protein 6	protein-coding
20.7-10	chrX	65399770	65400034	+	0.133333	NA	Intergenic	L1MA2|LINE|L1	-88833	NM_001010888	340554	Hs.21249	NM_001010888	ENSG00000102053	ZC3H12B	CXorf32|MCPIP2	zinc finger CCCH-type containing 12B	protein-coding
16.9333-15	chr5	175609071	175609274	+	0.133333	NA	Intergenic	Intergenic	-48899	NR_160284	3274	Hs.247885	NM_022304	ENSG00000113749	HRH2	H2R|HH2R	histamine receptor H2	protein-coding
39.1666	chr1	118185561	118185995	+	0.133333	NA	promoter-TSS (NM_206996)	promoter-TSS (NM_206996)	-550	NM_206996	200162	Hs.528821	NM_206996	ENSG00000155761	SPAG17	CT143|PF6	sperm associated antigen 17	protein-coding
34.9333-4	chr2	33460795	33461478	+	0.133333	NA	intron (NM_001349979, intron 1 of 17)	intron (NM_001349979, intron 1 of 17)	3081	NM_001349979	25780	Hs.143674	NM_015376	ENSG00000152689	RASGRP3	GRP3	RAS guanyl releasing protein 3	protein-coding
40.3333-2	chr13	29380137	29380550	+	0.133333	NA	intron (NM_001033602, intron 6 of 13)	intron (NM_001033602, intron 6 of 13)	-48317	NM_015233	23281	Hs.22287	NM_015233	ENSG00000132938	MTUS2	CAZIP|ICIS|KIAA0774|TIP150	microtubule associated scaffold protein 2	protein-coding
36-3	chr13	77254916	77255534	+	0.133333	NA	intron (NM_015057, intron 14 of 82)	L1MA4|LINE|L1	71869	NM_015057	23077	Hs.591221	NM_015057	ENSG00000005810	MYCBP2	Myc-bp2|PAM|PHR1|Phr	MYC binding protein 2	protein-coding
20.4-19	chr9	79071927	79072163	+	0.133333	NA	Intergenic	Intergenic	73621	NR_109771	101927450	Hs.738041	NR_109771	ENSG00000260995	LOC101927450	-	uncharacterized LOC101927450	ncRNA
20.7333-4	chr10	83588561	83588772	+	0.133333	NA	Intergenic	Ricksha_c|DNA|MULE-MuDR	88423	NR_134317	105378397	Hs.147725	NR_134317		LINC02650	-	long intergenic non-protein coding RNA 2650	ncRNA
31.8666-6	chr3	122251812	122252176	+	0.133333	NA	intron (NM_001178065, intron 1 of 6)	L2b|LINE|L2	67667	NM_001178065	846	Hs.435615	NM_000388	ENSG00000036828	CASR	CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1|hCasR	calcium sensing receptor	protein-coding
25.4-6	chr13	80364269	80364508	+	0.133333	NA	Intergenic	Intergenic	-23262	NM_005842	10253	Hs.18676	NM_005842	ENSG00000136158	SPRY2	IGAN3|hSPRY2	sprouty RTK signaling antagonist 2	protein-coding
39.2666-3	chr15	92022184	92022757	+	0.133333	NA	intron (NR_135775, intron 2 of 10)	intron (NR_135775, intron 2 of 10)	168166	NR_135775	28232	Hs.311187	NM_013272	ENSG00000176463	SLCO3A1	OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11	solute carrier organic anion transporter family member 3A1	protein-coding
56.1999-2	chr4	85466777	85467357	+	0.133333	NA	Intergenic	Intergenic	-8083	NM_001025616	83478	Hs.444229	NM_031305	ENSG00000138639	ARHGAP24	FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP	Rho GTPase activating protein 24	protein-coding
23.5-8	chr18	53326340	53326900	+	0.133333	NA	intron (NM_005215, intron 14 of 28)	intron (NM_005215, intron 14 of 28)	89519	NR_130465	100616232		NR_130465	ENSG00000263872	MIR4528	-	microRNA 4528	ncRNA
37.4667-3	chr2	67327106	67327665	+	0.133333	NA	Intergenic	Intergenic	-69948	NM_019002	54465	Hs.353022	NM_019002	ENSG00000143971	ETAA1	ETAA16	ETAA1 activator of ATR kinase	protein-coding
39.5999	chr1	43874283	43874634	+	0.133333	NA	intron (NR_073021, intron 6 of 9)	L1ME2z|LINE|L1	35836	NR_106727	102464830		NR_106727	ENSG00000283477	MIR6079	hsa-mir-6079	microRNA 6079	ncRNA
14.8333-9	chr2	33146951	33147098	+	0.133333	NA	intron (NM_206943, intron 5 of 33)	intron (NM_206943, intron 5 of 33)	12427	NM_001166266	4052	Hs.619315	NM_000627	ENSG00000049323	LTBP1	-	latent transforming growth factor beta binding protein 1	protein-coding
31.7333-5	chr4	31747951	31748347	+	0.133333	NA	Intergenic	MER52A|LTR|ERV1	241605	NR_149121	105374565	Hs.112715	NR_149121		LINC02501	-	long intergenic non-protein coding RNA 2501	ncRNA
16.0667-9	chr19	46778867	46779101	+	0.133333	NA	intron (NM_001145145, intron 3 of 6)	intron (NM_001145145, intron 3 of 6)	5830	NM_001145145	6510	Hs.631582	NM_005628	ENSG00000105281	SLC1A5	AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC	solute carrier family 1 member 5	protein-coding
17.4666-4	chr7	104421297	104421456	+	0.133333	NA	intron (NM_199000, intron 1 of 2)	intron (NM_199000, intron 1 of 2)	92720	NM_199000	375612	Hs.659164	NM_199000	ENSG00000187416	LHFPL3	LHFPL4	LHFPL tetraspan subfamily member 3	protein-coding
39.0666	chr14	25235341	25235846	+	0.133333	NA	Intergenic	L1PA16|LINE|L1	-185296	NM_001351940	29091	Hs.508958	NM_014178	ENSG00000168952	STXBP6	HSPC156|amisyn	syntaxin binding protein 6	protein-coding
25.0333-11	chr7	20953752	20954070	+	0.133333	NA	intron (NR_126381, intron 2 of 5)	intron (NR_126381, intron 2 of 5)	118480	NR_126381	104355138	Hs.650722	NR_126381	ENSG00000232790	LINC01162	-	long intergenic non-protein coding RNA 1162	ncRNA
22.6-15	chr5	4246323	4246577	+	0.133333	NA	Intergenic	Intergenic	-527031	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA
23.7666-2	chr15	36895514	36895795	+	0.133333	NA	intron (NM_172315, intron 9 of 11)	intron (NM_172315, intron 9 of 11)	-9121	NR_024264	145845	Hs.302693	NM_001101327		LOC145845	-	uncharacterized LOC145845	ncRNA
16.8666-5	chr8	36356862	36357040	+	0.133333	NA	Intergenic	Intergenic	-427423	NM_001031836	157855	Hs.13861	NM_001031836	ENSG00000215262	KCNU1	KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3	potassium calcium-activated channel subfamily U member 1	protein-coding
21.4-6	chr13	113848560	113848844	+	0.133333	NA	intron (NM_000820, intron 2 of 14)	intron (NM_000820, intron 2 of 14)	15374	NM_000820	2621	Hs.646346	NM_000820	ENSG00000183087	GAS6	AXLLG|AXSF	growth arrest specific 6	protein-coding
33.9666-3	chr8	89301896	89302348	+	0.133333	NA	Intergenic	L1MD3|LINE|L1	455589	NR_125822	101929709	Hs.651324	NR_125822	ENSG00000251136	LOC101929709	-	uncharacterized LOC101929709	ncRNA
46.6666-2	chr13	93759719	93760283	+	0.133333	NA	intron (NM_005708, intron 2 of 8)	A-rich|Low_complexity|Low_complexity	98472	NR_046536	100873973	Hs.615939	NR_046536		GPC6-AS2	-	GPC6 antisense RNA 2	ncRNA
41.8666-2	chr12	125849727	125850257	+	0.133333	NA	Intergenic	Intergenic	133382	NR_034132	400084	Hs.156191	NR_034132	ENSG00000249267	LINC00939	-	long intergenic non-protein coding RNA 939	ncRNA
11.1333-5	chr7	129455697	129455816	+	0.133333	NA	intron (NM_020704, intron 8 of 20)	MIR1_Amn|SINE|MIR	21324	NM_020704	57464	Hs.489988	NM_020704	ENSG00000128578	STRIP2	FAM40B|FAR11B	striatin interacting protein 2	protein-coding
18.1333-13	chr5	170506994	170507196	+	0.133333	NA	intron (NM_001278339, intron 1 of 7)	MIR3|SINE|MIR	3075	NM_001034837	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding
13.3667-2	chr11	82260296	82260516	+	0.133333	NA	intron (NR_120571, intron 3 of 7)	intron (NR_120571, intron 3 of 7)	143507	NR_120571	101928989	Hs.145117	NR_120571	ENSG00000245832	MIR4300HG	-	MIR4300 host gene	ncRNA
54.3666-2	chr8	126234258	126235022	+	0.133333	NA	Intergenic	Intergenic	-90855	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA
13.6333-7	chr20	52781041	52781230	+	0.133333	NA	Intergenic	Arthur1B|DNA|hAT-Tip100	160297	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA
27.4666-2	chr14	71578486	71578832	+	0.133333	NA	intron (NM_001354289, intron 5 of 23)	Tigger2b_Pri|DNA|TcMar-Tigger	-7639	NM_001284246	26037	Hs.654657	NM_015556	ENSG00000197555	SIPA1L1	E6TP1|SPAR1	signal induced proliferation associated 1 like 1	protein-coding
20.1666	chr11	115182247	115182437	+	0.133333	NA	intron (NM_001098517, intron 7 of 8)	intron (NM_001098517, intron 7 of 8)	-151235	NR_135108	105369509	Hs.736064	NR_135108		LOC105369509	-	uncharacterized LOC105369509	ncRNA
19.5666-3	chr9	100812420	100812591	+	0.133333	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-216222	NM_207299	54886	Hs.382683	NM_017753	ENSG00000148123	PLPPR1	LPPR1|PRG-3	phospholipid phosphatase related 1	protein-coding
26.8-18	chr7	63133663	63133956	+	0.133333	NA	Intergenic	L1MA3|LINE|L1	170247	NR_003952	643955	Hs.583308	NR_003952	ENSG00000185037	ZNF733P	ZNF733	zinc finger protein 733, pseudogene	pseudo
16-3	chr18	59739074	59739244	+	0.133333	NA	Intergenic	MLT1E2|LTR|ERVL-MaLR	-41736	NM_133459	147372	Hs.34333	NM_133459	ENSG00000183287	CCBE1	HKLLS1	collagen and calcium binding EGF domains 1	protein-coding
22.3333-8	chr16	68789361	68789632	+	0.133333	NA	intron (NM_001317185, intron 2 of 15)	intron (NM_001317185, intron 2 of 15)	52204	NM_004360	999	Hs.461086	NM_004360	ENSG00000039068	CDH1	Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO	cadherin 1	protein-coding
27.2666-8	chr8	102565800	102566206	+	0.133333	NA	Intergenic	(TCTGTC)n|Simple_repeat|Simple_repeat	14414	NM_024410	4956	Hs.159274	NM_024410	ENSG00000155087	ODF1	CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF	outer dense fiber of sperm tails 1	protein-coding
16.8666-3	chr5	146529418	146529638	+	0.133333	NA	Intergenic	LTR1B|LTR|ERV1	-13415	NM_194251	134391	Hs.483732	NM_194251	ENSG00000173250	GPR151	GALR4|GALRL|GPCR|GPCR-2037|PGR7	G protein-coupled receptor 151	protein-coding
46.9666-2	chr5	132018755	132019348	+	0.133333	NA	Intergenic	Intergenic	-6983	NM_001205250	23305	Hs.14945	NM_015256	ENSG00000164398	ACSL6	ACS2|FACL6|LACS 6|LACS2|LACS5	acyl-CoA synthetase long chain family member 6	protein-coding
29.7333-5	chr15	66598830	66599358	+	0.133333	NA	intron (NR_110372, intron 1 of 4)	AluSx1|SINE|Alu	16904	NR_110372	102723165	Hs.636703	NR_110372	ENSG00000259471	LINC01169	-	long intergenic non-protein coding RNA 1169	ncRNA
17.6333-6	chr19	14631544	14631774	+	0.133333	NA	intron (NM_032571, intron 13 of 15)	(TA)n|Simple_repeat|Simple_repeat	9446	NR_132784	106635534		NR_132784		SNORA104	-	small nucleolar RNA, H/ACA box 104	snoRNA
53.2666-2	chrX	64302883	64303522	+	0.133333	NA	intron (NM_017677, intron 12 of 13)	L1MD1|LINE|L1	-72595	NM_130388	142689	Hs.56281	NM_130388	ENSG00000198881	ASB12	-	ankyrin repeat and SOCS box containing 12	protein-coding
23.6-9	chr2	182964761	182965005	+	0.133333	NA	intron (NM_013436, intron 16 of 30)	intron (NM_013436, intron 16 of 30)	73574	NM_013436	10787	Hs.603732	NM_013436	ENSG00000061676	NCKAP1	HEM2|NAP1|NAP125|p125Nap1	NCK associated protein 1	protein-coding
50.4666	chr11	101028791	101029361	+	0.133333	NA	TTS (NR_073142)	TTS (NR_073142)	94802	NR_145747	109616988		NR_145747		SNORD13I	-	small nucleolar RNA, C/D box 13I	snoRNA
25-12	chr7	94611708	94612137	+	0.133333	NA	intron (NM_001346717, intron 5 of 9)	intron (NM_001346717, intron 5 of 9)	44211	NM_001346719	8910	Hs.371199	NM_003919	ENSG00000127990	SGCE	DYT11|ESG|epsilon-SG	sarcoglycan epsilon	protein-coding
35.5333-12	chr8	98725759	98726234	+	0.133333	NA	intron (NM_006281, intron 4 of 10)	MIRc|SINE|MIR	99675	NM_001256313	6788	Hs.492333	NM_006281	ENSG00000104375	STK3	KRS1|MST2	serine/threonine kinase 3	protein-coding
28.5666-2	chr19	28735083	28735434	+	0.133333	NA	Intergenic	L1PA17|LINE|L1	-7564	NR_110759	100420587	Hs.569956	NR_110759	ENSG00000283403	LOC100420587	-	SHC binding and spindle associated 1 pseudogene	pseudo
9.36665	chr2	155900137	155900214	+	0.133333	NA	Intergenic	Intergenic	354756	NR_110249	101929378	Hs.171192	NR_110249	ENSG00000226383	LINC01876	-	long intergenic non-protein coding RNA 1876	ncRNA
34.5666-2	chr10	51851670	51852207	+	0.133333	NA	intron (NM_001098512, intron 4 of 17)	MER117|DNA|hAT-Charlie	-152343	NM_015235	23283	Hs.591358	NM_015235	ENSG00000177613	CSTF2T	CstF-64T	cleavage stimulation factor subunit 2 tau variant	protein-coding
22.1333-9	chr2	214318914	214319112	+	0.133333	NA	intron (NR_047660, intron 14 of 14)	intron (NR_047660, intron 14 of 14)	-92041	NM_001345929	402117	Hs.534834	NM_001080500	ENSG00000174453	VWC2L	-	von Willebrand factor C domain containing 2 like	protein-coding
17.9333	chr1	64806263	64806457	+	0.133333	NA	intron (NM_001366165, intron 8 of 11)	AluJb|SINE|Alu	61285	NM_018211	55225	Hs.591443	NM_018211	ENSG00000162437	RAVER2	-	ribonucleoprotein, PTB binding 2	protein-coding
48.7666-3	chr7	23633095	23633486	+	0.133333	NA	intron (NM_138771, intron 3 of 3)	AluSp|SINE|Alu	35908	NM_138771	90693	Hs.232296	NM_138771	ENSG00000169193	CCDC126	-	coiled-coil domain containing 126	protein-coding
40-9	chr6	46458946	46459709	+	0.133333	NA	intron (NM_001251973, intron 1 of 4)	intron (NM_001251973, intron 1 of 4)	31996	NM_001251974	10231	Hs.440168	NM_005822	ENSG00000172348	RCAN2	CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4	regulator of calcineurin 2	protein-coding
34.9333-5	chr8	34472220	34472712	+	0.133333	NA	Intergenic	MLT1A1|LTR|ERVL-MaLR	-311455	NR_125746	103689844	Hs.590682	NR_125746	ENSG00000254344	LINC01288	TCONS_00014671	long intergenic non-protein coding RNA 1288	ncRNA
31.9333-7	chr20	59213716	59214289	+	0.133333	NA	intron (NM_178457, intron 3 of 4)	MamRep137|DNA|TcMar-Tigger	22982	NM_178457	128611	Hs.473204	NM_178457	ENSG00000124203	ZNF831	C20orf174	zinc finger protein 831	protein-coding
22.6333-14	chr4	78893234	78893652	+	0.133333	NA	intron (NM_198892, intron 15 of 15)	Tigger1|DNA|TcMar-Tigger	45995	NR_146463	152559	Hs.657312	NM_177453	ENSG00000163291	PAQR3	RKTG	progestin and adipoQ receptor family member 3	protein-coding
42.8-3	chr2	237284582	237285148	+	0.133333	NA	Intergenic	L2|LINE|L2	129299	NM_057164	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding
25.8-3	chr11	44831601	44831910	+	0.133333	NA	intron (NM_130783, intron 2 of 9)	L2a|LINE|L2	104793	NM_130783	90139	Hs.385634	NM_130783	ENSG00000157570	TSPAN18	TSPAN	tetraspanin 18	protein-coding
32.7666	chr6	16760988	16761233	+	0.133333	NA	promoter-TSS (NR_152113)	promoter-TSS (NR_152113)	-28	NR_136240	101928433	Hs.408455	NR_136240		LOC101928433	-	uncharacterized LOC101928433	ncRNA
18.7333-18	chr5	122705682	122705917	+	0.133333	NA	intron (NR_109881, intron 4 of 11)	intron (NR_109881, intron 4 of 11)	24761	NR_109881	101927379	Hs.536399	NR_109881	ENSG00000251538	LINC02201	-	long intergenic non-protein coding RNA 2201	ncRNA
28.6-20	chr3	175959563	175959987	+	0.133333	NA	Intergenic	L1MC4a|LINE|L1	-183442	NR_046714	100874245	Hs.614827	NR_046714		NAALADL2-AS1	-	NAALADL2 antisense RNA 1	ncRNA
38.6-5	chr19	14640877	14641316	+	0.133333	NA	intron (NM_032571, intron 10 of 15)	MER34B|LTR|ERV1	18883	NR_132784	106635534		NR_132784		SNORA104	-	small nucleolar RNA, H/ACA box 104	snoRNA
18.4-10	chr5	139912707	139913052	+	0.133333	NA	intron (NM_013983, intron 1 of 10)	MIR3|SINE|MIR	117071	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding
27.3333-9	chr6	125750950	125751463	+	0.133333	NA	intron (NM_012259, intron 1 of 4)	intron (NM_012259, intron 1 of 4)	1574	NM_012259	23493	Hs.144287	NM_012259	ENSG00000135547	HEY2	CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32	hes related family bHLH transcription factor with YRPW motif 2	protein-coding
24.1333	chr1	164566979	164567171	+	0.133333	NA	intron (NM_001204963, intron 2 of 8)	intron (NM_001204963, intron 2 of 8)	7353	NM_001353130	5087	Hs.557097	NM_002585	ENSG00000185630	PBX1	CAKUHED	PBX homeobox 1	protein-coding
51.9666	chr3	118658087	118658608	+	0.133333	NA	intron (NR_135547, intron 2 of 3)	L1M1|LINE|L1	16579	NR_135573	101926968	Hs.518185	NR_135573		LOC101926968	-	uncharacterized LOC101926968	ncRNA
26.4666	chr10	70091638	70091898	+	0.133333	NA	exon (NM_018649, exon 4 of 9)	exon (NM_018649, exon 4 of 9)	38922	NM_018649	55506	Hs.499953	NM_018649	ENSG00000099284	H2AFY2	macroH2A2	H2A histone family member Y2	protein-coding
18.2-12	chr2	99054035	99054294	+	0.133333	NA	intron (NR_146001, intron 15 of 18)	L1MA9|LINE|L1	87016	NR_146001	80705	Hs.120267	NM_025244	ENSG00000135951	TSGA10	CEP4L|CT79|SPGF26	testis specific 10	protein-coding
16.8-12	chrX	104469335	104469542	+	0.133333	NA	Intergenic	L2|LINE|L2	-96761	NM_017416	26280	Hs.675519	NM_017416	ENSG00000189108	IL1RAPL2	IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1	interleukin 1 receptor accessory protein like 2	protein-coding
17.1-22	chrX	28174491	28174691	+	0.133333	NA	Intergenic	L1PB4|LINE|L1	-193142	NM_001017930	139425	Hs.447365	NM_001017930	ENSG00000226372	DCAF8L1	WDR42B	DDB1 and CUL4 associated factor 8 like 1	protein-coding
34.6666-4	chr8	52430494	52430841	+	0.133333	NA	Intergenic	AluSx3|SINE|Alu	-20788	NM_001352835	9705	Hs.655499	NM_014682	ENSG00000147488	ST18	NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387	ST18 C2H2C-type zinc finger transcription factor	protein-coding
20.6666-3	chr15	64275535	64275722	+	0.133333	NA	intron (NM_001329607, intron 2 of 11)	intron (NM_001329607, intron 2 of 11)	80545	NM_001329606	53944	Hs.646508	NM_022048	ENSG00000169118	CSNK1G1	CK1gamma1	casein kinase 1 gamma 1	protein-coding
18.1-9	chr18	44553156	44553338	+	0.133333	NA	intron (NR_131768, intron 4 of 4)	MIRc|SINE|MIR	21468	NR_131768	105667213	Hs.135737	NR_131768		LINC01601	-	long intergenic non-protein coding RNA 1601	ncRNA
12.7-3	chr18	25391588	25391699	+	0.133333	NA	Intergenic	MIRb|SINE|MIR	-39477	NM_001308225	25925	Hs.116935	NM_015461	ENSG00000198795	ZNF521	EHZF|Evi3	zinc finger protein 521	protein-coding
30.8-11	chr5	163467817	163468225	+	0.133333	NA	intron (NM_012484, intron 4 of 17)	intron (NM_012484, intron 4 of 17)	7389	NM_001142557	3161	Hs.740467	NM_012484	ENSG00000072571	HMMR	CD168|IHABP|RHAMM	hyaluronan mediated motility receptor	protein-coding
17.9333-10	chr22	17674698	17674903	+	0.133333	NA	intron (NR_073068, intron 2 of 4)	intron (NR_073068, intron 2 of 4)	19138	NR_073068	23786	Hs.631672	NM_015367	ENSG00000099968	BCL2L13	BCL-RAMBO|Bcl2-L-13|MIL1	BCL2 like 13	protein-coding
28.3333-15	chr8	135423891	135424174	+	0.133333	NA	Intergenic	Intergenic	-33424	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	KH RNA binding domain containing, signal transduction associated 3	protein-coding
48.7666-2	chr17	77404843	77405447	+	0.133333	NA	promoter-TSS (NM_001293696)	promoter-TSS (NM_001293696)	68	NM_001293696	10801	Hs.440932	NM_006640	ENSG00000184640	SEPTIN9	AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1	septin 9	protein-coding
12.2666	chr4	142618932	142619171	+	0.133333	NA	intron (NM_003866, intron 2 of 26)	L1MB1|LINE|L1	227484	NM_001331040	8821	Hs.176376	NM_003866	ENSG00000109452	INPP4B	-	inositol polyphosphate-4-phosphatase type II B	protein-coding
40.5333-5	chr20	58209861	58210318	+	0.133333	NA	Intergenic	Intergenic	18564	NM_001304369	140731	Hs.266571	NM_080674	ENSG00000124227	ANKRD60	C20orf86|bA196N14.3	ankyrin repeat domain 60	protein-coding
29.4-2	chr11	41856939	41857276	+	0.133333	NA	Intergenic	Intergenic	142539	NR_120584	102723644	Hs.564283	NR_120584	ENSG00000255171	LINC01499	-	long intergenic non-protein coding RNA 1499	ncRNA
41.3666	chr14	47546850	47547441	+	0.133333	NA	intron (NM_001113498, intron 1 of 16)	intron (NM_001113498, intron 1 of 16)	127809	NM_001113498	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
19.2-6	chr16	88593051	88593214	+	0.133333	NA	intron (NM_001294340, intron 4 of 18)	MER44D|DNA|TcMar-Tigger	22729	NM_001294340	124245	Hs.93670	NM_144604	ENSG00000158545	ZC3H18	NHN1	zinc finger CCCH-type containing 18	protein-coding
46.4-3	chr2	124504237	124504845	+	0.133333	NA	exon (NM_001367498, exon 8 of 24)	exon (NM_001367498, exon 8 of 24)	479254	NM_001367498	129684	Hs.660653	NM_130773	ENSG00000155052	CNTNAP5	caspr5	contactin associated protein like 5	protein-coding
29.6666-8	chr8	137271932	137272253	+	0.133333	NA	Intergenic	L1PREC2|LINE|L1	141496	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
22.5333-16	chr6	51909597	51909866	+	0.133333	NA	intron (NM_138694, intron 39 of 66)	intron (NM_138694, intron 39 of 66)	177882	NM_138694	5314	Hs.662050	NM_138694	ENSG00000170927	PKHD1	ARPKD|FCYT|FPC|PKD4|TIGM1	PKHD1 ciliary IPT domain containing fibrocystin/polyductin	protein-coding
21.2-3	chr10	104497797	104498048	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	-17647	NR_120624	101927523	Hs.407539	NR_120624	ENSG00000225768	LINC02620	-	long intergenic non-protein coding RNA 2620	ncRNA
19.9-12	chr3	150476545	150476904	+	0.133333	NA	Intergenic	L1M4a2|LINE|L1	68426	NM_014779	9819	Hs.722470	NM_014779	ENSG00000196428	TSC22D2	TILZ4a|TILZ4b|TILZ4c	TSC22 domain family member 2	protein-coding
15.8667	chr1	102718612	102718831	+	0.133333	NA	Intergenic	Intergenic	389775	NM_080629	1301	Hs.523446	NM_001854	ENSG00000060718	COL11A1	CO11A1|COLL6|STL2	collagen type XI alpha 1 chain	protein-coding
46.4999-3	chr7	44289294	44289839	+	0.133333	NA	intron (NM_172081, intron 1 of 18)	intron (NM_172081, intron 1 of 18)	36028	NM_001220	816	Hs.351887	NM_001220	ENSG00000058404	CAMK2B	CAM2|CAMK2|CAMKB|MRD54	calcium/calmodulin dependent protein kinase II beta	protein-coding
21.4-8	chr2	146372270	146372456	+	0.133333	NA	Intergenic	L1PREC2|LINE|L1	-214694	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
17.4333-4	chr2	236768017	236768163	+	0.133333	NA	Intergenic	Intergenic	198265	NM_020311	57007	Hs.471751	NM_020311	ENSG00000144476	ACKR3	CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1	atypical chemokine receptor 3	protein-coding
19.7-14	chr8	129939740	129940171	+	0.133333	NA	promoter-TSS (NM_001353299)	promoter-TSS (NM_001353299)	-144	NM_001256763	51571	Hs.126941	NM_016623	ENSG00000153310	FAM49B	BM-009|L1	family with sequence similarity 49 member B	protein-coding
15.7-11	chr7	13456645	13456884	+	0.133333	NA	Intergenic	L1M5|LINE|L1	529750	NM_001163150	2115	Hs.22634	NM_004956	ENSG00000006468	ETV1	ER81	ETS variant 1	protein-coding
45.1-3	chr3	96407409	96407873	+	0.133333	NA	Intergenic	Intergenic	47677	NR_107027	102465864		NR_107027	ENSG00000278103	MIR8060	hsa-mir-8060	microRNA 8060	ncRNA
32.3999-2	chr20	6915764	6916063	+	0.133333	NA	Intergenic	Intergenic	148227	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A|SSFSC	bone morphogenetic protein 2	protein-coding
22.5666-3	chr9	16763894	16764081	+	0.133333	NA	intron (NM_017637, intron 1 of 6)	intron (NM_017637, intron 1 of 6)	37173	NR_151723	111216284	Hs.609218	NR_151723	ENSG00000234779	BNC2-AS1	-	BNC2 antisense RNA 1	ncRNA
27.3-9	chr9	37970955	37971491	+	0.133333	NA	intron (NM_003028, intron 3 of 5)	intron (NM_003028, intron 3 of 5)	-66870	NR_024873	92014	Hs.634120	NM_033412	ENSG00000122696	SLC25A51	CG7943|MCART1	solute carrier family 25 member 51	protein-coding
25.7333-7	chr16	27084464	27084967	+	0.133333	NA	Intergenic	Intergenic	17788	NM_001145545	162083	Hs.120831	NM_182831		C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding
20.6666-2	chr12	112912805	112913021	+	0.133333	NA	intron (NM_002534, intron 3 of 4)	L1MEg|LINE|L1	5951	NM_016816	4938	Hs.524760	NM_002534	ENSG00000089127	OAS1	E18/E16|IFI-4|OIAS|OIASI	2'-5'-oligoadenylate synthetase 1	protein-coding
33.6667-2	chr10	55955284	55955671	+	0.133333	NA	Intergenic	Intergenic	-327535	NM_001354404	65217	Hs.280209	NM_033056	ENSG00000150275	PCDH15	CDHR15|DFNB23|USH1F	protocadherin related 15	protein-coding
26.1333-9	chr9	115171379	115171672	+	0.133333	NA	intron (NR_163556, intron 1 of 7)	intron (NR_163556, intron 1 of 7)	29707	NR_163556	50514	Hs.148841	NM_017418	ENSG00000173077	DEC1	CTS9	deleted in esophageal cancer 1	ncRNA
31.6-3	chr2	68044912	68045395	+	0.133333	NA	intron (NM_173177, intron 4 of 4)	intron (NM_173177, intron 4 of 4)	17851	NM_001190263	10438	Hs.602900	NM_006333	ENSG00000197223	C1D	LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D	C1D nuclear receptor corepressor	protein-coding
28.5333-9	chr4	19305727	19306063	+	0.133333	NA	Intergenic	L1MCb|LINE|L1	-946010	NM_004787	9353	Hs.29802	NM_004787	ENSG00000145147	SLIT2	SLIL3|Slit-2	slit guidance ligand 2	protein-coding
20.3666	chr3	87558976	87559205	+	0.133333	NA	Intergenic	Intergenic	-233616	NM_001322208	3355	Hs.248136	NM_000866	ENSG00000179097	HTR1F	5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77	5-hydroxytryptamine receptor 1F	protein-coding
29.4333-9	chr8	78045834	78046347	+	0.133333	NA	Intergenic	L1MA4|LINE|L1	-470250	NM_006823	5569	Hs.433700	NM_006823	ENSG00000171033	PKIA	PRKACN1	cAMP-dependent protein kinase inhibitor alpha	protein-coding
27.9333-7	chr7	7358271	7358567	+	0.133333	NA	3' UTR (NM_001037763, exon 35 of 35)	3' UTR (NM_001037763, exon 35 of 35)	103265	NR_108073	101927354	Hs.520664	NR_108073		LOC101927354	-	uncharacterized LOC101927354	ncRNA
23.5666-3	chr6	17636580	17636986	+	0.133333	NA	intron (NM_005124, intron 16 of 21)	intron (NM_005124, intron 16 of 21)	36481	NM_016255	51439	Hs.95260	NM_016255	ENSG00000137414	FAM8A1	AHCP	family with sequence similarity 8 member A1	protein-coding
22.2-15	chr6	153249677	153249897	+	0.133333	NA	Intergenic	Intergenic	-118505	NM_012419	26575	Hs.166313	NM_012419	ENSG00000091844	RGS17	RGS-17|RGSZ2|hRGS17	regulator of G protein signaling 17	protein-coding
28.7333-3	chr1	175706269	175706721	+	0.133333	NA	intron (NM_003285, intron 1 of 22)	intron (NM_003285, intron 1 of 22)	37100	NM_001328635	7143	Hs.659864	NM_003285	ENSG00000116147	TNR	TN-R	tenascin R	protein-coding
28.5-10	chr5	90692484	90693062	+	0.133333	NA	exon (NM_032119, exon 32 of 90)	exon (NM_032119, exon 32 of 90)	133976	NR_003149	84059	Hs.591777	NM_032119	ENSG00000164199	ADGRV1	FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b	adhesion G protein-coupled receptor V1	protein-coding
25.3666-6	chr8	110337674	110338027	+	0.133333	NA	Intergenic	Intergenic	-362079	NM_014379	27012	Hs.13285	NM_014379	ENSG00000164794	KCNV1	HNKA|KCNB3|KV2.3|KV8.1	potassium voltage-gated channel modifier subfamily V member 1	protein-coding
53.9666	chr6	149085389	149085847	+	0.133333	NA	Intergenic	Intergenic	-52957	NR_134599	105378047	Hs.659484	NR_134599		LOC105378047	-	uncharacterized LOC105378047	ncRNA
10.9-3	chr13	80592431	80592534	+	0.133333	NA	Intergenic	Intergenic	-251356	NM_005842	10253	Hs.18676	NM_005842	ENSG00000136158	SPRY2	IGAN3|hSPRY2	sprouty RTK signaling antagonist 2	protein-coding
39.6999	chr2	135169883	135170180	+	0.133333	NA	3' UTR (NM_012233, exon 24 of 24)	3' UTR (NM_012233, exon 24 of 24)	33403	NR_145723	109616967		NR_145723	ENSG00000208308	SNORA40B	-	small nucleolar RNA, H/ACA box 40B	snoRNA
27-22	chr8	41939256	41939545	+	0.133333	NA	intron (NM_006766, intron 15 of 16)	FAM|SINE|Alu	-42659	NM_001142446	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding
39.5-3	chr2	104179274	104179812	+	0.133333	NA	Intergenic	L1M1|LINE|L1	228789	NR_037885	100287010	Hs.694603	NR_037885		LOC100287010	-	uncharacterized LOC100287010	ncRNA
41.3333	chr17	70592558	70592954	+	0.133333	NA	Intergenic	Intergenic	423221	NM_000891	3759	Hs.1547	NM_000891	ENSG00000123700	KCNJ2	ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3	potassium voltage-gated channel subfamily J member 2	protein-coding
26.6-18	chr7	84979706	84980066	+	0.133333	NA	Intergenic	L1PBa1|LINE|L1	142045	NM_152754	223117	Hs.201340	NM_152754	ENSG00000153993	SEMA3D	Sema-Z2|coll-2	semaphorin 3D	protein-coding
36.9333-10	chr8	119078217	119078635	+	0.133333	NA	intron (NM_006438, intron 1 of 5)	intron (NM_006438, intron 1 of 5)	-9644	NR_134297	101927513	Hs.676598	NR_134297	ENSG00000254278	LOC101927513	-	uncharacterized LOC101927513	ncRNA
25.8666-2	chr10	118692663	118693086	+	0.133333	NA	intron (NM_153810, intron 6 of 8)	intron (NM_153810, intron 6 of 8)	62096	NM_153810	143384	Hs.420024	NM_153810	ENSG00000151893	CACUL1	C10orf46|CAC1	CDK2 associated cullin domain 1	protein-coding
26-12	chr9	132728661	132729198	+	0.133333	NA	intron (NM_001317959, intron 13 of 14)	AluJb|SINE|Alu	58465	NM_012204	9329	Hs.22302	NM_012204	ENSG00000125484	GTF3C4	KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA	general transcription factor IIIC subunit 4	protein-coding
21.8666-2	chr17	72190058	72190239	+	0.133333	NA	Intergenic	Intergenic	69128	NM_000346	6662	Hs.647409	NM_000346	ENSG00000125398	SOX9	CMD1|CMPD1|SRA1|SRXX2|SRXY10	SRY-box transcription factor 9	protein-coding
25.2999	chr12	28481978	28482364	+	0.133333	NA	intron (NM_001352082, intron 12 of 13)	MER46C|DNA|TcMar-Tigger	-291433	NR_148936	729291	Hs.129278	NR_148936		LOC729291	-	uncharacterized LOC729291	ncRNA
15.2-6	chr6	47910735	47910904	+	0.133333	NA	intron (NM_207499, intron 2 of 2)	intron (NM_207499, intron 2 of 2)	123751	NR_033806	221391	Hs.213717	NM_181744	ENSG00000124818	OPN5	GPR136|GRP136|PGR12|TMEM13	opsin 5	protein-coding
31.7333	chr1	13430411	13430737	+	0.133333	NA	Intergenic	LTR12E|LTR|ERV1	20124	NM_001099852	645425		NM_001099852	ENSG00000204478	PRAMEF20	PRAMEF21	PRAME family member 20	protein-coding
14.6333-13	chr5	160194800	160195042	+	0.133333	NA	intron (NM_001130958, intron 1 of 6)	L2a|LINE|L2	-4120	NM_001040442	2172	Hs.519719	NM_001445	ENSG00000170231	FABP6	I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP	fatty acid binding protein 6	protein-coding
55.3666-2	chr6	69933627	69934195	+	0.133333	NA	intron (NM_001858, intron 7 of 50)	intron (NM_001858, intron 7 of 50)	67355	NM_001858	1310	Hs.444842	NM_001858	ENSG00000082293	COL19A1	COL9A1L|D6S228E	collagen type XIX alpha 1 chain	protein-coding
31.6999	chr5	140988143	140988508	+	0.133333	NA	intron (NM_018911, intron 3 of 3)	intron (NM_018911, intron 3 of 3)	21558	NM_031883	56134	Hs.199343	NM_018899	ENSG00000243232	PCDHAC2	PCDH-ALPHA-C2	protocadherin alpha subfamily C, 2	protein-coding
12.8333-12	chr8	102829979	102830120	+	0.133333	NA	intron (NM_015878, intron 10 of 12)	intron (NM_015878, intron 10 of 12)	23227	NR_149020	401472		NR_149020		GASAL1	GASL1	growth arrest associated lncRNA 1	ncRNA
33-6	chrX	43627977	43628463	+	0.133333	NA	Intergenic	Intergenic	-26687	NM_001270458	4128	Hs.183109	NM_000240	ENSG00000189221	MAOA	BRNRS|MAO-A	monoamine oxidase A	protein-coding
48.4667	chr1	153607462	153608089	+	0.133333	NA	intron (NR_133645, intron 2 of 2)	intron (NR_133645, intron 2 of 2)	1580	NM_001317008	140576	Hs.515714	NM_080388	ENSG00000188643	S100A16	AAG13|DT1P1A7|S100F	S100 calcium binding protein A16	protein-coding
23.5333-13	chr5	40389950	40390166	+	0.133333	NA	Intergenic	L2a|LINE|L2	-289857	NM_000958	5734	Hs.199248	NM_000958	ENSG00000171522	PTGER4	EP4|EP4R	prostaglandin E receptor 4	protein-coding
55.7	chr7	99380297	99381103	+	0.133333	NA	intron (NM_005720, intron 1 of 9)	intron (NM_005720, intron 1 of 9)	5970	NM_005720	10095	Hs.489284	NM_005720	ENSG00000130429	ARPC1B	ARC41|PLTEID|p40-ARC|p41-ARC	actin related protein 2/3 complex subunit 1B	protein-coding
26.0666-4	chr18	54653585	54653893	+	0.133333	NA	Intergenic	Charlie1a|DNA|hAT-Charlie	62580	NM_173629	284254	Hs.376146	NM_173629	ENSG00000178690	DYNAP	C18orf26	dynactin associated protein	protein-coding
41.4666-3	chr2	72299319	72299829	+	0.133333	NA	intron (NR_135773, intron 19 of 21)	L1P2|LINE|L1	-151712	NM_019885	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
30.8-7	chr4	31520722	31521043	+	0.133333	NA	intron (NR_149121, intron 1 of 2)	intron (NR_149121, intron 1 of 2)	14338	NR_149121	105374565	Hs.112715	NR_149121		LINC02501	-	long intergenic non-protein coding RNA 2501	ncRNA
28.6-9	chr18	52611182	52611575	+	0.133333	NA	intron (NM_005215, intron 1 of 28)	intron (NM_005215, intron 1 of 28)	271181	NM_005215	1630	Hs.162025	NM_005215	ENSG00000187323	DCC	CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1	DCC netrin 1 receptor	protein-coding
22.2333-16	chr8	69086464	69086698	+	0.133333	NA	intron (NR_039986, intron 1 of 4)	intron (NR_039986, intron 1 of 4)	17609	NR_039986	100505718	Hs.122386	NR_039986	ENSG00000253658	LINC01592	-	long intergenic non-protein coding RNA 1592	ncRNA
21.3-3	chr10	57820177	57820459	+	0.133333	NA	Intergenic	Intergenic	447576	NM_152230	253430	Hs.30280	NM_152230	ENSG00000151151	IPMK	-	inositol polyphosphate multikinase	protein-coding
38.7666	chr1	15006834	15007484	+	0.133333	NA	intron (NM_001370231, intron 3 of 8)	L2b|LINE|L2	61240	NM_001017999	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	kazrin, periplakin interacting protein	protein-coding
40.7333-7	chr4	39706856	39707295	+	0.133333	NA	intron (NM_001111113, intron 1 of 4)	AluSx|SINE|Alu	8939	NM_001312646	3093	Hs.50308	NM_005339	ENSG00000078140	UBE2K	E2-25K|HIP2|HYPG|LIG|UBC1	ubiquitin conjugating enzyme E2 K	protein-coding
37.3-4	chr3	152171667	152172067	+	0.133333	NA	intron (NR_136178, intron 2 of 2)	AluSz|SINE|Alu	33562	NR_136178	101928166		NR_136178		LOC101928166	-	uncharacterized LOC101928166	ncRNA
13.2666	chr13	22746526	22746638	+	0.133333	NA	Intergenic	Intergenic	151599	NR_033774	646201	Hs.729338	NR_033774		BASP1P1	-	BASP1 pseudogene 1	pseudo
23.2-14	chr3	186481873	186482054	+	0.133333	NA	intron (NR_033844, intron 2 of 7)	L1MA4|LINE|L1	11698	NR_033844	253573	Hs.97386	NR_033844	ENSG00000224406	LINC02052	-	long intergenic non-protein coding RNA 2052	ncRNA
25.8-7	chr13	33268366	33268693	+	0.133333	NA	intron (NM_001243476, intron 5 of 17)	MIRb|SINE|MIR	-9025	NR_046693	100874241	Hs.662433	NR_046693	ENSG00000236581	STARD13-AS	STARD13-AS2	STARD13 antisense RNA	ncRNA
13.3333-15	chr5	18373110	18373308	+	0.133333	NA	Intergenic	AluJr4|SINE|Alu	565935	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
22.6666-3	chr2	88549411	88549607	+	0.133333	NA	intron (NR_110236, intron 2 of 2)	MIRb|SINE|MIR	10789	NR_110236	101928371	Hs.738045	NR_110236	ENSG00000225420	LOC101928371	-	uncharacterized LOC101928371	ncRNA
55.7666	chr9	32105883	32106607	+	0.133333	NA	Intergenic	Intergenic	-278358	NM_001278352	48	Hs.567229	NM_002197	ENSG00000122729	ACO1	ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1	aconitase 1	protein-coding
37.8-7	chr20	50533806	50534197	+	0.133333	NA	intron (NM_001278618, intron 1 of 8)	AluSz|SINE|Alu	23618	NM_002827	5770	Hs.417549	NM_002827	ENSG00000196396	PTPN1	PTP1B	protein tyrosine phosphatase non-receptor type 1	protein-coding
47.3333-3	chr16	73424243	73424952	+	0.133333	NA	Intergenic	AluJr|SINE|Alu	37792	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA
44.4667	chr12	97306808	97307466	+	0.133333	NA	Intergenic	Intergenic	-155639	NR_152618	196475	Hs.652568	NR_024037	ENSG00000255794	RMST	LINC00054|NCRMS|NCRNA00054	rhabdomyosarcoma 2 associated transcript	ncRNA
14.3-7	chr2	101951338	101951448	+	0.133333	NA	Intergenic	L1M5|LINE|L1	-32072	NR_103791	100506328	Hs.516245	NR_103791		LINC01127	-	long intergenic non-protein coding RNA 1127	ncRNA
35.2333-5	chr5	73532032	73532374	+	0.133333	NA	Intergenic	MER1B|DNA|hAT-Charlie	33436	NM_023039	57763	Hs.239154	NM_023039	ENSG00000164331	ANKRA2	ANKRA	ankyrin repeat family A member 2	protein-coding
52.8332	chr9	9117347	9117787	+	0.133333	NA	intron (NM_002839, intron 10 of 45)	intron (NM_002839, intron 10 of 45)	259549	NR_121599	101929407	Hs.649971	NR_121599		PTPRD-AS1	-	PTPRD antisense RNA 1	ncRNA
31.5-13	chr6	45973969	45974313	+	0.133333	NA	intron (NM_001370649, intron 1 of 5)	L1ME3G|LINE|L1	-36544	NR_045672	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding
35.6666-3	chr20	55047857	55048277	+	0.133333	NA	Intergenic	Intergenic	-374976	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA
25.4-4	chr11	102832192	102832628	+	0.133333	NA	non-coding (NR_038390, exon 6 of 8)	non-coding (NR_038390, exon 6 of 8)	11199	NM_002422	4314	Hs.375129	NM_002422	ENSG00000149968	MMP3	CHDS6|MMP-3|SL-1|STMY|STMY1|STR1	matrix metallopeptidase 3	protein-coding
17.7333-13	chr5	159672555	159672776	+	0.133333	NA	Intergenic	MSTB-int|LTR|ERVL-MaLR	198719	NR_109891	101927766	Hs.638568	NR_109891	ENSG00000253311	LINC01847	-	long intergenic non-protein coding RNA 1847	ncRNA
43.6333	chr21	31364389	31364930	+	0.133333	NA	intron (NM_001353690, intron 1 of 27)	intron (NM_001353690, intron 1 of 27)	-20305	NM_001353694	7074	Hs.517228	NM_003253	ENSG00000156299	TIAM1	TIAM-1	T cell lymphoma invasion and metastasis 1	protein-coding
24.0667-3	chr10	60993699	60994026	+	0.133333	NA	intron (NM_001350902, intron 1 of 11)	intron (NM_001350902, intron 1 of 11)	7135	NM_001350906	9886	Hs.737374	NM_014836	ENSG00000072422	RHOBTB1	-	Rho related BTB domain containing 1	protein-coding
23-8	chr5	94437728	94438003	+	0.133333	NA	intron (NM_001145678, intron 14 of 20)	intron (NM_001145678, intron 14 of 20)	180739	NM_173665	285600	Hs.425123	NM_173665	ENSG00000185261	KIAA0825	C5orf36	KIAA0825	protein-coding
39.5333-3	chr2	160517268	160517932	+	0.133333	NA	Intergenic	Intergenic	-23793	NM_002897	5937	Hs.470412	NM_002897	ENSG00000153250	RBMS1	C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1	RNA binding motif single stranded interacting protein 1	protein-coding
32.1333-3	chr18	579300	579760	+	0.133333	NA	promoter-TSS (NM_004066)	promoter-TSS (NM_004066)	-850	NM_004066	1068	Hs.122511	NM_004066	ENSG00000177143	CETN1	CEN1|CETN	centrin 1	protein-coding
35.8666-7	chr5	67198141	67198763	+	0.133333	NA	Intergenic	MIRc|SINE|MIR	-1653	NM_005582	4064	Hs.87205	NM_005582	ENSG00000134061	CD180	LY64|Ly78|RP105	CD180 molecule	protein-coding
16.5333-4	chr14	50058451	50058606	+	0.133333	NA	intron (NR_131171, intron 2 of 8)	LTR40a|LTR|ERVL	46515	NR_131171	196913	Hs.406934	NM_001014830		LINC01599	C14orf183	long intergenic non-protein coding RNA 1599	ncRNA
49.5999-2	chr5	162360949	162361452	+	0.133333	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	293558	NM_000816	2566	Hs.7195	NM_000816	ENSG00000113327	GABRG2	CAE2|ECA2|EIEE74|FEB8|GEFSP3	gamma-aminobutyric acid type A receptor gamma2 subunit	protein-coding
30.7333-13	chr8	64302235	64302601	+	0.133333	NA	intron (NR_125826, intron 1 of 4)	intron (NR_125826, intron 1 of 4)	66140	NR_125826	102724623	Hs.586375	NR_125826	ENSG00000253554	LINC01414	-	long intergenic non-protein coding RNA 1414	ncRNA
31.1999-2	chr2	241107949	241108575	+	0.133333	NA	exon (NM_001252120, exon 17 of 19)	exon (NM_001252120, exon 17 of 19)	-5930	NM_001330179	130916	Hs.159556	NM_182501	ENSG00000122085	MTERF4	MTERFD2	mitochondrial transcription termination factor 4	protein-coding
38.6667	chr1	162861550	162862083	+	0.133333	NA	intron (NM_178550, intron 1 of 3)	LTR78B|LTR|ERV1	6999	NM_178550	339512	Hs.407631	NM_178550	ENSG00000185860	CCDC190	C1orf110	coiled-coil domain containing 190	protein-coding
19.1333-6	chr2	70475783	70476041	+	0.133333	NA	intron (NR_046798, intron 1 of 2)	intron (NR_046798, intron 1 of 2)	5728	NR_046798	100874273	Hs.682157	NR_046798	ENSG00000224606	TGFA-IT1	-	TGFA intronic transcript 1	ncRNA
13-7	chr21	30149736	30149891	+	0.133333	NA	Intergenic	L1ME4a|LINE|L1	16992	NM_012131	26285	Hs.258589	NM_012131	ENSG00000156282	CLDN17	-	claudin 17	protein-coding
28.2999	chr2	14931514	14931954	+	0.133333	NA	Intergenic	Intergenic	299017	NR_144632	151354	Hs.260855	NM_145175	ENSG00000162981	LRATD1	FAM84A|NSE1|PP11517	LRAT domain containing 1	protein-coding
26.4667-10	chr6	157382416	157382769	+	0.133333	NA	intron (NM_024630, intron 1 of 8)	intron (NM_024630, intron 1 of 8)	1402	NM_153746	79683	Hs.596214	NM_024630	ENSG00000175048	ZDHHC14	NEW1CP	zinc finger DHHC-type containing 14	protein-coding
32.3999-3	chr21	37023417	37023743	+	0.133333	NA	Intergenic	L1PA8A|LINE|L1	16878	NM_018962	53820	Hs.254560	NM_018962	ENSG00000183145	RIPPLY3	DSCR6	ripply transcriptional repressor 3	protein-coding
19.9666	chr11	62059292	62059441	+	0.133333	NA	Intergenic	AluSz|SINE|Alu	-64645	NM_001040694	3619	Hs.142179	NM_020238	ENSG00000149503	INCENP	-	inner centromere protein	protein-coding
22.4666-4	chr8	33637428	33637834	+	0.133333	NA	Intergenic	Intergenic	-37525	NM_001305115	78986	Hs.8719	NM_024025	ENSG00000133878	DUSP26	DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3	dual specificity phosphatase 26	protein-coding
28.7666-6	chr2	159951484	159951875	+	0.133333	NA	intron (NM_001007267, intron 23 of 26)	intron (NM_001007267, intron 23 of 26)	-46923	NM_001198760	100526664	Hs.153563	NM_001198759	ENSG00000248672	LY75-CD302	CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6	LY75-CD302 readthrough	protein-coding
21.2-11	chr16	75019691	75019919	+	0.133333	NA	intron (NM_032268, intron 1 of 4)	AluJo|SINE|Alu	20781	NM_032268	84937	Hs.427284	NM_032268	ENSG00000186187	ZNRF1	NIN283	zinc and ring finger 1	protein-coding
37.6333-4	chr7	103957213	103957920	+	0.133333	NA	intron (NM_005045, intron 1 of 64)	MIRc|SINE|MIR	31950	NM_173054	5649	Hs.655654	NM_005045	ENSG00000189056	RELN	ETL7|LIS2|PRO1598|RL	reelin	protein-coding
27.4667-3	chr12	20029820	20030194	+	0.133333	NA	intron (NR_040098, intron 2 of 2)	L2b|LINE|L2	15322	NR_040098	100506393	Hs.658356	NR_040098	ENSG00000256287	LINC02398	-	long intergenic non-protein coding RNA 2398	ncRNA
49.4333-2	chr7	33529180	33529840	+	0.133333	NA	intron (NM_198428, intron 20 of 22)	intron (NM_198428, intron 20 of 22)	-375405	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
22.8-10	chr2	50408088	50408352	+	0.133333	NA	intron (NM_001330093, intron 17 of 22)	intron (NM_001330093, intron 17 of 22)	-60464	NM_138735	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
31.1333-2	chr14	103307069	103307364	+	0.133333	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-10068	NR_135269	105378183	Hs.132624	NR_135269		LOC105378183	-	uncharacterized LOC105378183	ncRNA
18.7666	chr1	165919181	165919605	+	0.133333	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	11472	NR_037431	100500832		NR_037431	ENSG00000283936	MIR3658	-	microRNA 3658	ncRNA
30.7-2	chr11	25966843	25967533	+	0.133333	NA	Intergenic	L1MA8|LINE|L1	-221935	NM_001313726	63982	Hs.91791	NM_031418	ENSG00000134343	ANO3	C11orf25|DYT23|DYT24|GENX-3947|TMEM16C	anoctamin 3	protein-coding
9.53332	chr11	113556472	113556579	+	0.133333	NA	Intergenic	Charlie4z|DNA|hAT-Charlie	-81127	NM_000795	1813	Hs.73893	NM_000795	ENSG00000149295	DRD2	D2DR|D2R	dopamine receptor D2	protein-coding
21.8	chr1	74186034	74186448	+	0.133333	NA	intron (NM_001105659, intron 1 of 7)	Charlie17|DNA|hAT-Charlie	11935	NM_001322315	127255	Hs.644625	NM_145258	ENSG00000162620	LRRIQ3	LRRC44	leucine rich repeats and IQ motif containing 3	protein-coding
34.9-3	chr3	150312232	150312622	+	0.133333	NA	intron (NR_110187, intron 1 of 1)	L1MB7|LINE|L1	11320	NR_110187	101928022	Hs.555199	NR_110186		LINC01214	-	long intergenic non-protein coding RNA 1214	ncRNA
25.8999-2	chr8	135571937	135572227	+	0.133333	NA	intron (NM_006558, intron 5 of 8)	intron (NM_006558, intron 5 of 8)	114626	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	KH RNA binding domain containing, signal transduction associated 3	protein-coding
31-6	chr2	37919715	37920126	+	0.133333	NA	Intergenic	Intergenic	-5367	NM_001170791	151393	Hs.591566	NM_144713	ENSG00000115841	RMDN2	BLOCK18|FAM82A|FAM82A1|PRO34163|PYST9371|RMD-2|RMD2|RMD4	regulator of microtubule dynamics 2	protein-coding
15.7-9	chr4	159649813	159649990	+	0.133333	NA	Intergenic	L1MA6|LINE|L1	127883	NR_146278	109729132		NR_146278	ENSG00000250488	LINC02233	-	long intergenic non-protein coding RNA 2233	ncRNA
18.3666	chr12	108786444	108786639	+	0.133333	NA	3' UTR (NM_018984, exon 15 of 15)	3' UTR (NM_018984, exon 15 of 15)	41010	NM_001161331	54434	Hs.199763	NM_018984	ENSG00000084112	SSH1	SSH1L	slingshot protein phosphatase 1	protein-coding
24.4333	chr1	90570776	90571115	+	0.133333	NA	Intergenic	Intergenic	-86805	NR_145742	109616984		NR_145742	ENSG00000199666	SNORD3G	-	small nucleolar RNA, C/D box 3G	snoRNA
29.6666-3	chr14	70798936	70799272	+	0.133333	NA	intron (NM_033141, intron 2 of 12)	L1ME4a|LINE|L1	10067	NM_001284230	4293	Hs.445496	NM_033141	ENSG00000006432	MAP3K9	MEKK9|MLK1|PRKE1	mitogen-activated protein kinase kinase kinase 9	protein-coding
8.03333	chr13	72649047	72649196	+	0.133333	NA	Intergenic	Intergenic	78508	NM_001071775	440145	Hs.28465	NM_001071775	ENSG00000204899	MZT1	C13orf37|MOZART1	mitotic spindle organizing protein 1	protein-coding
30.4666-4	chr9	29657156	29657414	+	0.133333	NA	Intergenic	HERV17-int|LTR|ERV1	-443684	NM_001258282	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
34.4666-2	chr12	1551276	1551682	+	0.133333	NA	Intergenic	Kanga1c|DNA|TcMar-Tc2	-19287	NR_160736	107984507		NR_160736		LOC107984507	-	uncharacterized LOC107984507	ncRNA
35.8666-4	chr18	627130	627778	+	0.133333	NA	exon (NM_014410, exon 5 of 9)	exon (NM_014410, exon 5 of 9)	10754	NM_199167	27098	Hs.732341	NM_014410	ENSG00000079101	CLUL1	RA337M	clusterin like 1	protein-coding
14.8667-12	chr8	8344233	8344448	+	0.133333	NA	intron (NM_001369759, intron 3 of 5)	L1ME3Cz|LINE|L1	41904	NM_001369759	157285	Hs.583863	NM_001080826	ENSG00000275342	PRAG1	NACK|PEAK2|PRAGMIN|SGK223	PEAK1 related, kinase-activating pseudokinase 1	protein-coding
24.3333-11	chr7	25244633	25244851	+	0.133333	NA	Intergenic	Intergenic	-16256	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding
30-9	chr2	184310149	184310493	+	0.133333	NA	Intergenic	Intergenic	-68654	NR_039638	100616305		NR_039638	ENSG00000266808	MIR548AE1	-	microRNA 548ae-1	ncRNA
28.2667-4	chr2	44033019	44033394	+	0.133333	NA	Intergenic	Intergenic	-37217	NM_133259	10128	Hs.368084	NM_133259	ENSG00000138095	LRPPRC	CLONE-23970|GP130|LRP130|LSFC	leucine rich pentatricopeptide repeat containing	protein-coding
36.2-8	chr7	144682555	144683079	+	0.133333	NA	intron (NR_146936, intron 3 of 11)	intron (NR_146936, intron 3 of 11)	56081	NR_146936	27010	Hs.660232	NM_022445	ENSG00000196511	TPK1	HTPK1|PP20|THMD5	thiamin pyrophosphokinase 1	protein-coding
19.9667-6	chr2	148045573	148045891	+	0.133333	NA	intron (NM_018328, intron 2 of 14)	intron (NM_018328, intron 2 of 14)	-24128	NM_181742	5000	Hs.558364	NM_002552	ENSG00000115947	ORC4	ORC4L|ORC4P	origin recognition complex subunit 4	protein-coding
26.0333-6	chr2	49931462	49931798	+	0.133333	NA	intron (NM_001330097, intron 5 of 5)	intron (NM_001330097, intron 5 of 5)	42573	NM_001320156	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
40.1666	chr20	35855468	35855970	+	0.133333	NA	intron (NM_016436, intron 4 of 17)	AluSx1|SINE|Alu	83704	NM_016436	51230	Hs.517044	NM_016436	ENSG00000025293	PHF20	C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP	PHD finger protein 20	protein-coding
61.3999	chr10	122344315	122344875	+	0.133333	NA	Intergenic	Intergenic	-30113	NM_001001974	59338	Hs.643512	NM_021622	ENSG00000107679	PLEKHA1	TAPP1	pleckstrin homology domain containing A1	protein-coding
26.6333-7	chr22	34517537	34517831	+	0.133333	NA	Intergenic	MER41B|LTR|ERV1	480232	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
45.7666-6	chr9	6691677	6692058	+	0.133333	NA	Intergenic	AluSq2|SINE|Alu	-28996	NM_001146696	23081	Hs.709425	NM_015061	ENSG00000107077	KDM4C	GASC1|JHDM3C|JMJD2C|TDRD14C	lysine demethylase 4C	protein-coding
41.4666-4	chr5	82002549	82003070	+	0.133333	NA	intron (NM_031482, intron 2 of 7)	L1PA15|LINE|L1	30786	NM_031482	83734	Hs.713698	NM_031482	ENSG00000152348	ATG10	APG10|APG10L|pp12616	autophagy related 10	protein-coding
39.4-9	chr5	40927384	40927893	+	0.133333	NA	intron (NM_000587, intron 1 of 17)	L1MA3|LINE|L1	18141	NM_000587	730	Hs.78065	NM_000587	ENSG00000112936	C7	-	complement C7	protein-coding
36.9999-2	chr8	121605704	121606082	+	0.133333	NA	Intergenic	Intergenic	-33453	NR_002835	594842	Hs.668686	NR_002835		HAS2-AS1	HAS2-AS|HAS2AS|HASNT|NCRNA00077	HAS2 antisense RNA 1	ncRNA
28.6333-8	chr4	48520258	48520513	+	0.133333	NA	intron (NM_015030, intron 55 of 63)	intron (NM_015030, intron 55 of 63)	30133	NM_175619	326340	Hs.276457	NM_175619	ENSG00000182223	ZAR1	Z3CXXC6	zygote arrest 1	protein-coding
37.8-4	chr17	55910797	55911144	+	0.133333	NA	Intergenic	MER52D|LTR|ERV1	159865	NM_001102402	58488	Hs.285218	NM_021213	ENSG00000141179	PCTP	PC-TP|STARD2	phosphatidylcholine transfer protein	protein-coding
48.7666-4	chr9	30991511	30992132	+	0.133333	NA	Intergenic	Intergenic	389669	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
29.2-7	chr3	11782518	11782919	+	0.133333	NA	Intergenic	Intergenic	-62179	NM_014667	9686	Hs.740389	NM_014667	ENSG00000144560	VGLL4	VGL-4	vestigial like family member 4	protein-coding
26.2999-2	chrX	152270055	152270474	+	0.133333	NA	intron (NM_000808, intron 4 of 9)	THE1C|LTR|ERVL-MaLR	122035	NR_029521	406897		NR_029521	ENSG00000207957	MIR105-1	MIRN105-1|mir-105-1	microRNA 105-1	ncRNA
26.3333	chr11	23730104	23730387	+	0.133333	NA	Intergenic	Intergenic	-311055	NR_107021	102465860		NR_107021	ENSG00000275868	MIR8054	hsa-mir-8054	microRNA 8054	ncRNA
34.7-6	chr3	1831393	1832045	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-267084	NM_001350095	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
31.3333-8	chr3	185028636	185029136	+	0.1	NA	intron (NM_001009921, intron 45 of 46)	L2b|LINE|L2	124174	NM_001025266	285382	Hs.245793	NM_001025266	ENSG00000187068	C3orf70	-	chromosome 3 open reading frame 70	protein-coding
33.9333-4	chr7	5167537	5167993	+	0.1	NA	Intergenic	AluSc|SINE|Alu	-22468	NM_015610	26100	Hs.122363	NM_015610	ENSG00000157954	WIPI2	ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2	WD repeat domain, phosphoinositide interacting 2	protein-coding
10.7667-6	chr22	24325523	24325630	+	0.1	NA	intron (NM_015330, intron 6 of 16)	(ATTT)n|Simple_repeat|Simple_repeat	-16532	NM_001254733	23384	Hs.474384	NM_015330	ENSG00000100014	SPECC1L	CYTSA|GBBB2|OBLFC1|TBHS	sperm antigen with calponin homology and coiled-coil domains 1 like	protein-coding
47.1	chr16	56515133	56515871	+	0.1	NA	intron (NM_031885, intron 1 of 16)	MER106A|DNA|hAT-Charlie	4522	NM_031885	583	Hs.333738	NM_031885	ENSG00000125124	BBS2	BBS|RP74	Bardet-Biedl syndrome 2	protein-coding
39.6333-4	chr6	40170959	40171711	+	0.1	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	184671	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA
20.7667-15	chr8	100773365	100773833	+	0.1	NA	Intergenic	Intergenic	-51511	NM_002568	26986	Hs.387804	NM_002568	ENSG00000070756	PABPC1	PAB1|PABP|PABP1|PABPC2|PABPL1	poly(A) binding protein cytoplasmic 1	protein-coding
20.8333-17	chrX	85993438	85993750	+	0.1	NA	intron (NM_001320959, intron 2 of 14)	L2c|LINE|L2	53712	NM_001362518	1121	Hs.496449	NM_000390	ENSG00000188419	CHM	DXS540|GGTA|HSD-32|REP-1|TCD	CHM Rab escort protein	protein-coding
21.7333-2	chr11	131063345	131063795	+	0.1	NA	Intergenic	Intergenic	-147083	NM_001347921	399979	Hs.444024	NM_014758	ENSG00000120451	SNX19	CHET8	sorting nexin 19	protein-coding
20.7333-7	chr12	75204253	75204696	+	0.1	NA	intron (NM_001260499, intron 2 of 3)	intron (NM_001260499, intron 2 of 3)	5274	NM_139136	3747	Hs.27214	NM_139136	ENSG00000166006	KCNC2	KV3.2	potassium voltage-gated channel subfamily C member 2	protein-coding
19-7	chr17	72983791	72984092	+	0.1	NA	intron (NM_001352692, intron 4 of 9)	MamGypLTR2c|LTR|Gypsy	108747	NM_001159770	201266	Hs.221127	NM_139177	ENSG00000133195	SLC39A11	C17orf26|ZIP-11|ZIP11	solute carrier family 39 member 11	protein-coding
34	chr1	239145314	239145849	+	0.1	NA	Intergenic	Intergenic	-240987	NM_001347716	1131	Hs.7138	NM_000740	ENSG00000133019	CHRM3	EGBRS|HM3|PBS	cholinergic receptor muscarinic 3	protein-coding
14.3667-8	chr8	89003488	89003748	+	0.1	NA	Intergenic	HAL1|LINE|L1	-676135	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
28.6667-2	chr1	98072343	98072873	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-22915	NR_046105	400765	Hs.451802	NM_001001688	ENSG00000225206	MIR137HG	-	MIR137 host gene	ncRNA
12.6333-9	chr7	41298168	41298340	+	0.1	NA	Intergenic	Intergenic	196650	NR_110832	101928773	Hs.382363	NR_110832	ENSG00000224017	LINC01449	-	long intergenic non-protein coding RNA 1449	ncRNA
25.2-13	chr22	44750075	44750476	+	0.1	NA	intron (NM_181334, intron 4 of 14)	L1PA17|LINE|L1	-2283	NM_181335	23779	Hs.102336	NM_181335	ENSG00000241484	ARHGAP8	BPGAP1|PP610	Rho GTPase activating protein 8	protein-coding
15.3667-10	chr7	113981450	113981711	+	0.1	NA	Intergenic	Intergenic	-62571	NM_002711	5506	Hs.458309	NM_002711	ENSG00000154415	PPP1R3A	GM|PP1G|PPP1R3	protein phosphatase 1 regulatory subunit 3A	protein-coding
37.4333-2	chr12	24124057	24124546	+	0.1	NA	intron (NM_152989, intron 4 of 17)	intron (NM_152989, intron 4 of 17)	-88120	NR_030625	100126320		NR_030625	ENSG00000216192	MIR920	MIRN920|hsa-mir-920	microRNA 920	ncRNA
35.6-11	chr4	39043076	39043637	+	0.1	NA	Intergenic	Intergenic	-1475	NM_001007075	51088	Hs.272251	NM_015990	ENSG00000109790	KLHL5	-	kelch like family member 5	protein-coding
14.4-7	chr14	78911751	78911991	+	0.1	NA	intron (NM_004796, intron 7 of 16)	intron (NM_004796, intron 7 of 16)	-288111	NR_135159	105370586		NR_135159	ENSG00000258419	LOC105370586	-	uncharacterized LOC105370586	ncRNA
34.2333-3	chr6	163060309	163060899	+	0.1	NA	intron (NM_001080379, intron 2 of 4)	intron (NM_001080379, intron 2 of 4)	-6443	NR_110871	101929239	Hs.571035	NR_110871	ENSG00000225437	PACRG-AS2	-	PACRG antisense RNA 2	ncRNA
35.3333-8	chr18	71721110	71721556	+	0.1	NA	Intergenic	Intergenic	60893	NR_126324	102724913		NR_126324	ENSG00000265352	LINC01899	-	long intergenic non-protein coding RNA 1899	ncRNA
25.8667-7	chr2	164917953	164918446	+	0.1	NA	intron (NM_001199148, intron 6 of 10)	L1M5|LINE|L1	37326	NM_001199148	151258	Hs.658702	NM_173512	ENSG00000169507	SLC38A11	AVT2	solute carrier family 38 member 11	protein-coding
26.5333-8	chr3	67341620	67341959	+	0.1	NA	Intergenic	L1PA16|LINE|L1	116325	NR_036234	100422941		NR_036234	ENSG00000283298	MIR4272	-	microRNA 4272	ncRNA
25.6333-12	chr8	21131873	21132450	+	0.1	NA	Intergenic	Intergenic	158175	NR_033894	286114	Hs.651884	NR_033894	ENSG00000253199	LINC02153	-	long intergenic non-protein coding RNA 2153	ncRNA
20.3-14	chr4	164284089	164284338	+	0.1	NA	intron (NM_001166373, intron 1 of 7)	intron (NM_001166373, intron 1 of 7)	-86502	NM_012403	23520	Hs.661161	NM_012403		ANP32C	PP32R1	acidic nuclear phosphoprotein 32 family member C	protein-coding
46.7333-4	chr3	182232577	182233403	+	0.1	NA	Intergenic	Intergenic	253372	NR_040105	401103	Hs.591304	NR_040105	ENSG00000241098	LINC01994	-	long intergenic non-protein coding RNA 1994	ncRNA
12.0667-12	chr7	19694779	19695057	+	0.1	NA	TTS (NM_001002926)	TTS (NM_001002926)	10518	NR_036101	100422967		NR_036101	ENSG00000265932	MIR3146	mir-3146	microRNA 3146	ncRNA
17.8333-3	chr16	61606607	61607017	+	0.1	NA	Intergenic	L1MB3|LINE|L1	429626	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
17.7667-12	chr9	10463595	10464025	+	0.1	NA	intron (NM_002839, intron 2 of 45)	L1M6|LINE|L1	149192	NM_002839	5789	Hs.446083	NM_002839	ENSG00000153707	PTPRD	HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA	protein tyrosine phosphatase receptor type D	protein-coding
17.1333-6	chr12	117692900	117693195	+	0.1	NA	intron (NM_173598, intron 4 of 19)	L1MB5|LINE|L1	275943	NM_173598	283455	Hs.375836	NM_173598	ENSG00000171435	KSR2	-	kinase suppressor of ras 2	protein-coding
14.3-13	chr6	33636658	33636934	+	0.1	NA	intron (NM_002224, intron 1 of 57)	L2a|LINE|L2	-3051	NR_134628	101929188	Hs.658327	NR_134628		LOC101929188	-	uncharacterized LOC101929188	ncRNA
30.1333-6	chr2	222006240	222006648	+	0.1	NA	Intergenic	Intergenic	-291703	NR_161172	151278	Hs.350729	NM_153038	ENSG00000163081	CCDC140	-	coiled-coil domain containing 140	ncRNA
31.4-7	chr2	42410258	42410605	+	0.1	NA	Intergenic	L1ME4b|LINE|L1	-41474	NM_001319036	9167	Hs.339639	NM_004718	ENSG00000115944	COX7A2L	COX7AR|COX7RP|EB1|SIG81	cytochrome c oxidase subunit 7A2 like	protein-coding
6.23333	chr10	59153314	59153376	+	0.1	NA	Intergenic	Intergenic	23119	NR_131782	105682749	Hs.592518	NR_131782		CCEPR	CCHE1|lncRNA-CCHE1	cervical carcinoma expressed PCNA regulatory lncRNA	ncRNA
36-4	chr13	89946644	89947168	+	0.1	NA	Intergenic	L1MEf|LINE|L1	172811	NR_047489	100874187	Hs.564526	NR_047489	ENSG00000261446	LINC00559	-	long intergenic non-protein coding RNA 559	ncRNA
18.6-12	chr2	127725038	127725306	+	0.1	NA	exon (NM_018383, exon 9 of 22)	exon (NM_018383, exon 9 of 22)	23675	NM_032740	84826	Hs.345849	NM_032740	ENSG00000173349	SFT2D3	-	SFT2 domain containing 3	protein-coding
25.5-8	chr8	6498600	6498928	+	0.1	NA	TTS (NM_001118887)	TTS (NM_001118887)	64481	NM_001118887	285	Hs.583870	NM_001147	ENSG00000091879	ANGPT2	AGPT2|ANG2	angiopoietin 2	protein-coding
20.9667-15	chr8	81766784	81767254	+	0.1	NA	Intergenic	L1M4|LINE|L1	34571	NM_152284	92421	Hs.183861	NM_152284	ENSG00000164695	CHMP4C	SNF7-3|Shax3|VPS32C	charged multivesicular body protein 4C	protein-coding
21.5667-6	chr20	13526074	13526456	+	0.1	NA	intron (NR_136631, intron 10 of 13)	intron (NR_136631, intron 10 of 13)	112667	NM_017714	55617	Hs.348297	NM_017714	ENSG00000089123	TASP1	C20orf13|dJ585I14.2	taspase 1	protein-coding
41.5333-2	chr13	105769695	105770321	+	0.1	NA	Intergenic	L1MC3|LINE|L1	63178	NR_046391	144920	Hs.567700	NR_046391		LINC00343	LINC00344|NCRNA00343|NCRNA00344	long intergenic non-protein coding RNA 343	ncRNA
20-12	chr8	119011109	119011548	+	0.1	NA	intron (NM_001324095, intron 1 of 7)	L1MC1|LINE|L1	-55919	NM_006438	10584	Hs.176615	NM_006438	ENSG00000184374	COLEC10	3MC3|CL-34|CLL1	collectin subfamily member 10	protein-coding
8.1-2	chr12	98132823	98132915	+	0.1	NA	Intergenic	Intergenic	-137421	NR_036189	100422924		NR_036189	ENSG00000263890	MIR4303	-	microRNA 4303	ncRNA
31.4-11	chr2	201639813	201640215	+	0.1	NA	intron (NM_001044385, intron 2 of 11)	intron (NM_001044385, intron 2 of 11)	2656	NM_152388	65062	Hs.12319	NM_152388	ENSG00000155755	TMEM237	ALS2CR4|JBTS14	transmembrane protein 237	protein-coding
23.8667-5	chr2	169561279	169561720	+	0.1	NA	intron (NM_024622, intron 4 of 14)	intron (NM_024622, intron 4 of 14)	12366	NM_024622	79675	Hs.529276	NM_024622	ENSG00000138399	FASTKD1	-	FAST kinase domains 1	protein-coding
4.8	chr18	36229438	36229532	+	0.1	NA	intron (NM_017947, intron 9 of 14)	L1MB1|LINE|L1	41988	NM_017947	55034	Hs.405028	NM_017947	ENSG00000075643	MOCOS	HMCS|MCS|MOS	molybdenum cofactor sulfurase	protein-coding
39.7667	chr1	20917828	20918413	+	0.1	NA	intron (NM_003760, intron 9 of 31)	intron (NM_003760, intron 9 of 31)	70312	NR_031657	100302155		NR_031657	ENSG00000221808	MIR1256	MIRN1256|hsa-mir-1256	microRNA 1256	ncRNA
21.0667-9	chr7	15598918	15599368	+	0.1	NA	Intergenic	MER52A|LTR|ERV1	-37128	NM_001004320	392636	Hs.670634	NM_001004320	ENSG00000187546	AGMO	TMEM195	alkylglycerol monooxygenase	protein-coding
9.23333-3	chr4	36795108	36795200	+	0.1	NA	Intergenic	L1M4a1|LINE|L1	-153254	NR_149124	105374400	Hs.570781	NR_149124	ENSG00000248215	LINC02505	-	long intergenic non-protein coding RNA 2505	ncRNA
20.9333-6	chr14	63690792	63691263	+	0.1	NA	intron (NM_030791, intron 2 of 2).2	intron (NM_030791, intron 2 of 2).2	37038	NM_030791	81537	Hs.24678	NM_030791	ENSG00000126821	SGPP1	SPP-1|SPPase1	sphingosine-1-phosphate phosphatase 1	protein-coding
23.3333-3	chr12	52407027	52407470	+	0.1	NA	promoter-TSS (NM_033033)	promoter-TSS (NM_033033)	-856	NM_033033	3888	Hs.134640	NM_033033	ENSG00000161850	KRT82	HB2|Hb-2|KRTHB2	keratin 82	protein-coding
18.8-3	chr10	59704417	59704807	+	0.1	NA	intron (NM_194298, intron 1 of 5)	intron (NM_194298, intron 1 of 5)	5279	NM_001323980	220963	Hs.499709	NM_194298	ENSG00000165449	SLC16A9	C10orf36|MCT9	solute carrier family 16 member 9	protein-coding
20-13	chrX	144524405	144524863	+	0.1	NA	Intergenic	THE1B|LTR|ERVL-MaLR	640563	NR_121210	389898	Hs.585177	NM_001012989	ENSG00000276380	UBE2NL	Li174	ubiquitin conjugating enzyme E2 N like (gene/pseudogene)	protein-coding
27.9667-8	chr22	28206021	28206510	+	0.1	NA	intron (NM_001145418, intron 5 of 22)	intron (NM_001145418, intron 5 of 22)	-253604	NR_106713	102466081		NR_106713	ENSG00000276162	MIR5739	hsa-mir-5739	microRNA 5739	ncRNA
21.8333-2	chr11	78821265	78821583	+	0.1	NA	intron (NM_001098816, intron 12 of 33)	intron (NM_001098816, intron 12 of 33)	-246560	NM_024678	79731	Hs.503389	NM_024678	ENSG00000137513	NARS2	DFNB94|SLM5|asnRS	asparaginyl-tRNA synthetase 2, mitochondrial	protein-coding
15.3-7	chr5	11611446	11611793	+	0.1	NA	intron (NM_001288717, intron 2 of 20)	AluSx|SINE|Alu	-22553	NM_001364128	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
10.9667-5	chr9	127106964	127107092	+	0.1	NA	intron (NM_012098, intron 2 of 4)	intron (NM_012098, intron 2 of 4)	15607	NM_012098	23452	Hs.653262	NM_012098	ENSG00000136859	ANGPTL2	ARP2|HARP	angiopoietin like 2	protein-coding
10.3667-3	chr15	32989378	32989542	+	0.1	NA	intron (NM_001277313, intron 7 of 20)	intron (NM_001277313, intron 7 of 20)	78714	NM_001103184	342184	Hs.657649	NM_198500	ENSG00000248905	FMN1	FMN|LD	formin 1	protein-coding
17.4667-9	chr20	5992331	5992712	+	0.1	NA	intron (NR_110101, intron 4 of 4)	intron (NR_110101, intron 4 of 4)	13300	NR_110101	101929225	Hs.635771	NR_110101	ENSG00000278719	MCM8-AS1	-	MCM8 antisense RNA 1	ncRNA
22.5667-5	chr3	37838496	37838827	+	0.1	NA	intron (NR_110531, intron 1 of 3)	L1MC4a|LINE|L1	23119	NR_110532	101928153	Hs.657314	NR_110531	ENSG00000235257	ITGA9-AS1	-	ITGA9 antisense RNA 1	ncRNA
21.0667-8	chr3	35946524	35946817	+	0.1	NA	Intergenic	Intergenic	202194	NR_029824	406916		NR_029824	ENSG00000207625	MIR128-2	MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b	microRNA 128-2	ncRNA
20.4-18	chr9	76339068	76339519	+	0.1	NA	intron (NM_001190482, intron 34 of 36)	L1M5|LINE|L1	55133	NM_018339	55312	Hs.37558	NM_018339	ENSG00000135002	RFK	RIFK	riboflavin kinase	protein-coding
31.4667-5	chr4	69631594	69632087	+	0.1	NA	intron (NM_001301239, intron 1 of 4)	intron (NM_001301239, intron 1 of 4)	7802	NM_001105677	574537	Hs.225950	NM_001105677	ENSG00000271271	UGT2A2	-	UDP glucuronosyltransferase family 2 member A2	protein-coding
19.9-3	chr10	78056301	78056568	+	0.1	NA	3' UTR (NM_001142285, exon 5 of 5)	3' UTR (NM_001142285, exon 5 of 5)	22571	NM_001142285	6229	Hs.280130	NM_001026	ENSG00000138326	RPS24	DBA3|S24|eS24	ribosomal protein S24	protein-coding
18.5-7	chr19	39678238	39678547	+	0.1	NA	promoter-TSS (NR_034156)	promoter-TSS (NR_034156)	-982	NR_034156	400696	Hs.456377	NM_207646	ENSG00000226025	LGALS17A	-	galectin 14 pseudogene	pseudo
28.3-8	chr7	38706571	38707123	+	0.1	NA	Intergenic	L2c|LINE|L2	-19758	NR_028347	340286	Hs.144075	NM_001105282	ENSG00000164556	FAM183BP	FAM183B|THEG6	acyloxyacyl hydrolase (neutrophil)	pseudo
32.5667-9	chr5	175354419	175354811	+	0.1	NA	Intergenic	Intergenic	89567	NM_000794	1812	Hs.2624	NM_000794	ENSG00000184845	DRD1	DADR|DRD1A	dopamine receptor D1	protein-coding
22.4-2	chr1	112458944	112459382	+	0.1	NA	3' UTR (NM_018704, exon 6 of 6)	3' UTR (NM_018704, exon 6 of 6)	2670	NR_036210	100422976		NR_036210	ENSG00000283296	MIR4256	-	microRNA 4256	ncRNA
21.5333-2	chr15	73903175	73903664	+	0.1	NA	Intergenic	LTR16C|LTR|ERVL	-23043	NM_005576	4016	Hs.65436	NM_005576	ENSG00000129038	LOXL1	LOL|LOXL	lysyl oxidase like 1	protein-coding
28.1333-8	chr17	53404996	53405277	+	0.1	NA	Intergenic	L1MEc|LINE|L1	-417791	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
40.2333	chr18	8377960	8378449	+	0.1	NA	intron (NM_002845, intron 24 of 30)	intron (NM_002845, intron 24 of 30)	-11170	NR_024419	100192426	Hs.666655	NR_024419	ENSG00000266149	LOC100192426	-	uncharacterized LOC100192426	ncRNA
21.4-14	chr9	27875684	27876137	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-302044	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
15.5667-15	chr9	76316990	76317193	+	0.1	NA	intron (NM_001190482, intron 29 of 36)	AluSz|SINE|Alu	77335	NM_018339	55312	Hs.37558	NM_018339	ENSG00000135002	RFK	RIFK	riboflavin kinase	protein-coding
21.4667-10	chr8	127816637	127816913	+	0.1	NA	intron (NR_003367, intron 1 of 8)	AluSq2|SINE|Alu	20813	NR_031609	100302185		NR_031609	ENSG00000283710	MIR1204	hsa-mir-1204	microRNA 1204	ncRNA
45.7667-4	chr8	87517069	87517823	+	0.1	NA	Intergenic	Intergenic	356569	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
9.96667-4	chr8	110352659	110352819	+	0.1	NA	Intergenic	L2a|LINE|L2	-376968	NM_014379	27012	Hs.13285	NM_014379	ENSG00000164794	KCNV1	HNKA|KCNB3|KV2.3|KV8.1	potassium voltage-gated channel modifier subfamily V member 1	protein-coding
14.2333-8	chr2	119528223	119528401	+	0.1	NA	Intergenic	LTR33|LTR|ERVL	-3860	NM_002980	6344	Hs.42091	NM_002980	ENSG00000080293	SCTR	SR	secretin receptor	protein-coding
43.4333	chr10	29883710	29884510	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-147174	NM_001323599	6840	Hs.499209	NM_003174	ENSG00000197321	SVIL	-	supervillin	protein-coding
30.2-13	chr6	147380255	147380689	+	0.1	NA	intron (NM_139244, intron 24 of 25)	L1MB7|LINE|L1	-128218	NM_001030060	389432	Hs.567973	NM_001030060	ENSG00000203727	SAMD5	dJ875H10.1	sterile alpha motif domain containing 5	protein-coding
45.7333-6	chr2	53944956	53945756	+	0.1	NA	intron (NM_014614, intron 3 of 46)	intron (NM_014614, intron 3 of 46)	25637	NM_014614	23198	Hs.413801	NM_014614	ENSG00000068878	PSME4	PA200	proteasome activator subunit 4	protein-coding
7.83333-2	chr15	81356143	81356243	+	0.1	NA	intron (NM_001080532, intron 8 of 21)	Charlie7a|DNA|hAT-Charlie	18020	NM_001080532	342125	Hs.253489	NM_181841	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding
26.8667-5	chr17	79084849	79085346	+	0.1	NA	intron (NM_001042573, intron 11 of 13)	intron (NM_001042573, intron 11 of 13)	10160	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding
20.7333-8	chr13	39569916	39570233	+	0.1	NA	intron (NM_005780, intron 2 of 3)	intron (NM_005780, intron 2 of 3)	33119	NM_005780	10186	Hs.507798	NM_005780	ENSG00000183722	LHFPL6	LHFP	LHFPL tetraspan subfamily member 6	protein-coding
13.1-9	chr8	32773462	32773628	+	0.1	NA	3' UTR (NM_001159995, exon 11 of 11)	3' UTR (NM_001159995, exon 11 of 11)	51710	NM_001322197	3084	Hs.453951	NM_004495	ENSG00000157168	NRG1	ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF	neuregulin 1	protein-coding
23.6667-7	chr3	126481767	126482026	+	0.1	NA	3' UTR (NM_144639, exon 20 of 20)	3' UTR (NM_144639, exon 20 of 20)	-5977	NM_001040653	79364	Hs.440049	NM_025112	ENSG00000070476	ZXDC	ZXDL	ZXD family zinc finger C	protein-coding
11.0333-6	chr8	115858551	115858729	+	0.1	NA	Intergenic	L1ME4c|LINE|L1	-189665	NM_014112	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
17.7-6	chr15	100272667	100272929	+	0.1	NA	intron (NM_139057, intron 4 of 21)	L1MB3|LINE|L1	69177	NM_139057	170691	Hs.513200	NM_139057	ENSG00000140470	ADAMTS17	WMS4	ADAM metallopeptidase with thrombospondin type 1 motif 17	protein-coding
28.3333-9	chr2	208982249	208982828	+	0.1	NA	Intergenic	Intergenic	439896	NR_136588	101927960	Hs.159960	NR_136588		LOC101927960	-	uncharacterized LOC101927960	ncRNA
16.7	chr1	38174366	38174611	+	0.1	NA	Intergenic	MIR3|SINE|MIR	40279	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA
13.8667-7	chr3	62162791	62162976	+	0.1	NA	intron (NM_002841, intron 7 of 29)	MSTA|LTR|ERVL-MaLR	156064	NR_038283	100506994	Hs.656620	NR_038281	ENSG00000241472	PTPRG-AS1	-	PTPRG antisense RNA 1	ncRNA
27.4-9	chr2	59310366	59310673	+	0.1	NA	Intergenic	L1MEf|LINE|L1	92811	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
19.9667-8	chr22	22996585	22996995	+	0.1	NA	Intergenic	L1M2|LINE|L1	-73729	NM_002073	2781	Hs.584760	NM_002073	ENSG00000128266	GNAZ	gz-alpha	G protein subunit alpha z	protein-coding
22.1333-19	chr8	136117906	136118189	+	0.1	NA	Intergenic	Intergenic	-412751	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
17.9333-6	chr2	193960526	193960889	+	0.1	NA	Intergenic	Intergenic	-383562	NR_110222	101927406	Hs.385793	NR_110222	ENSG00000225539	LINC01821	-	long intergenic non-protein coding RNA 1821	ncRNA
20.9-8	chr16	82481755	82482103	+	0.1	NA	Intergenic	Intergenic	-145040	NM_001220491	1012	Hs.654386	NM_001257	ENSG00000140945	CDH13	CDHH|P105	cadherin 13	protein-coding
9.26667	chr11	21908309	21908402	+	0.1	NA	Intergenic	Intergenic	-284730	NM_001142649	203859	Hs.154329	NM_213599	ENSG00000171714	ANO5	GDD1|LGMD2L|LGMDR12|TMEM16E	anoctamin 5	protein-coding
41.7333-2	chr14	46657322	46657801	+	0.1	NA	Intergenic	Arthur1|DNA|hAT-Tip100	-5780	NM_080746	140801	Hs.308332	NM_080746	ENSG00000165496	RPL10L	RPL10_5_1358	ribosomal protein L10 like	protein-coding
47.9333	chr6	107882228	107882994	+	0.1	NA	intron (NM_007214, intron 17 of 20)	intron (NM_007214, intron 17 of 20)	-58298	NM_198081	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	Scm polycomb group protein like 4	protein-coding
17.9-4	chr15	80068002	80068287	+	0.1	NA	intron (NM_001242914, intron 1 of 6)	AluJb|SINE|Alu	-4417	NM_001242915	54469	Hs.596679	NM_019006	ENSG00000086666	ZFAND6	AWP1|ZA20D3|ZFAND5B	zinc finger AN1-type containing 6	protein-coding
13.3-2	chr11	50465544	50465768	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	56509	NR_024504	646813	Hs.684179	NR_024504		LOC646813	-	DExH-box helicase 9 pseudogene	pseudo
21.9667-2	chr12	2561682	2562018	+	0.1	NA	intron (NM_199460, intron 11 of 49).2	intron (NM_199460, intron 11 of 49).2	110370	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA
25.5667-4	chr12	28662102	28662443	+	0.1	NA	Intergenic	L1MC1|LINE|L1	-471534	NR_148936	729291	Hs.129278	NR_148936		LOC729291	-	uncharacterized LOC729291	ncRNA
20.6333-15	chr8	135040664	135041018	+	0.1	NA	Intergenic	MLT1E2|LTR|ERVL-MaLR	190906	NR_125427	101927845	Hs.559609	NR_125427	ENSG00000251218	LOC101927845	-	uncharacterized LOC101927845	ncRNA
18.9333-2	chr11	20623171	20623419	+	0.1	NA	intron (NM_004211, intron 7 of 15)	L2a|LINE|L2	23895	NM_001318369	9152	Hs.136557	NM_004211	ENSG00000165970	SLC6A5	GLYT-2|GLYT2|HKPX3|NET1	solute carrier family 6 member 5	protein-coding
10.7667-5	chr20	9813094	9813275	+	0.1	NA	intron (NM_177990, intron 1 of 9)	L1ME1|LINE|L1	25892	NM_177990	57144	Hs.32539	NM_020341	ENSG00000101349	PAK5	PAK7	p21 (RAC1) activated kinase 5	protein-coding
27.6-5	chr2	48787968	48788315	+	0.1	NA	Intergenic	L2|LINE|L2	-32417	NM_000233	3973	Hs.468490	NM_000233	ENSG00000138039	LHCGR	HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5	luteinizing hormone/choriogonadotropin receptor	protein-coding
26.4333-11	chr20	47284922	47285550	+	0.1	NA	intron (NM_001281774, intron 9 of 23)	intron (NM_001281774, intron 9 of 23)	-33266	NR_024594	100131496	Hs.662547	NR_024594	ENSG00000267882	LOC100131496	-	uncharacterized LOC100131496	ncRNA
18.8667-9	chr22	26565019	26565327	+	0.1	NA	intron (NM_001362923, intron 1 of 7)	MIRc|SINE|MIR	168	NM_001008566	8459	Hs.632768	NM_003595	ENSG00000128294	TPST2	TANGO13B|TPST-2	tyrosylprotein sulfotransferase 2	protein-coding
9.03334	chr2	123351107	123351223	+	0.1	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-277684	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
33.2-8	chr16	82499224	82499585	+	0.1	NA	Intergenic	Intergenic	-127565	NM_001220491	1012	Hs.654386	NM_001257	ENSG00000140945	CDH13	CDHH|P105	cadherin 13	protein-coding
39.1-4	chr2	155222283	155222733	+	0.1	NA	Intergenic	Intergenic	523813	NM_002239	3760	Hs.591606	NM_002239	ENSG00000162989	KCNJ3	GIRK1|KGA|KIR3.1	potassium voltage-gated channel subfamily J member 3	protein-coding
35.6333-2	chr2	146312986	146313500	+	0.1	NA	Intergenic	Intergenic	-273814	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
44.5	chr16	67935117	67935728	+	0.1	NA	exon (NM_002801, exon 6 of 8)	exon (NM_002801, exon 6 of 8)	1428	NM_002801	5699	Hs.9661	NM_002801	ENSG00000205220	PSMB10	LMP10|MECL1|beta2i	proteasome subunit beta 10	protein-coding
25.3-12	chr4	44902986	44903485	+	0.1	NA	Intergenic	MamRep1151|LTR?|LTR?	-176601	NR_073095	132789	Hs.21398	NM_138335	ENSG00000163281	GNPDA2	GNP2|SB52	glucosamine-6-phosphate deaminase 2	protein-coding
10.7-9	chr8	136816019	136816229	+	0.1	NA	intron (NR_147196, intron 4 of 5)	intron (NR_147196, intron 4 of 5)	285326	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
36.9667-7	chr8	133035684	133036110	+	0.1	NA	TTS (NM_001282964)	TTS (NM_001282964)	10684	NR_107002	102466865		NR_107002	ENSG00000276961	MIR7848	hsa-mir-7848	microRNA 7848	ncRNA
17.1-10	chr17	5888614	5888861	+	0.1	NA	intron (NR_040000, intron 2 of 3)	intron (NR_040000, intron 2 of 3)	116503	NR_040000	339166	Hs.736088	NR_040000	ENSG00000284837	LOC339166	-	uncharacterized LOC339166	ncRNA
27.4	chr1	183940099	183940429	+	0.1	NA	intron (NM_015101, intron 11 of 11)	intron (NM_015101, intron 11 of 11)	97464	NM_001303421	23127	Hs.387995	NM_015101	ENSG00000198756	COLGALT2	C1orf17|ColGalT 2|GLT25D2	collagen beta(1-O)galactosyltransferase 2	protein-coding
23.0333	chr1	170184122	170184636	+	0.1	NA	intron (NR_146891, intron 1 of 4)	intron (NR_146891, intron 1 of 4)	10000	NR_146891	105371609	Hs.508115	NR_146891		LINC01681	-	long intergenic non-protein coding RNA 1681	ncRNA
38.5-3	chr8	103270578	103271191	+	0.1	NA	intron (NR_148215, intron 2 of 3)	MSTA-int|LTR|ERVL-MaLR	-27610	NM_001164615	8323	Hs.591863	NM_003506	ENSG00000164930	FZD6	FZ-6|FZ6|HFZ6|NDNC10	frizzled class receptor 6	protein-coding
19.4-6	chr14	21162040	21162446	+	0.1	NA	Intergenic	L1MEc|LINE|L1	-6180	NM_001004731	390445	Hs.553768	NM_001004731	ENSG00000169327	OR5AU1	OR14-38	olfactory receptor family 5 subfamily AU member 1	protein-coding
36-7	chr5	56317273	56318037	+	0.1	NA	Intergenic	Intergenic	-84325	NM_024669	79722	Hs.436214	NM_024669	ENSG00000164512	ANKRD55	-	ankyrin repeat domain 55	protein-coding
18.0667-12	chr4	101033966	101034316	+	0.1	NA	intron (NM_001130691, intron 11 of 12)	L2a|LINE|L2	206731	NR_107033	102465868		NR_107033	ENSG00000273882	MIR8066	hsa-mir-8066	microRNA 8066	ncRNA
26.7-11	chr8	125458896	125459476	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	26977	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding
16.1333-13	chr21	22377860	22378181	+	0.1	NA	Intergenic	AluSq2|SINE|Alu	279403	NR_038400	54143	Hs.352631	NR_038400	ENSG00000184856	LINC00308	C21orf74|NCRNA00308|PRED16	long intergenic non-protein coding RNA 308	ncRNA
9.56667	chr1	102150821	102150931	+	0.1	NA	Intergenic	Tigger6a|DNA|TcMar-Tigger	-153642	NM_001288823	118427	Hs.484475	NM_058170	ENSG00000118733	OLFM3	NOE3|NOELIN3|OPTIMEDIN	olfactomedin 3	protein-coding
27.8667	chr1	56820699	56821076	+	0.1	NA	Intergenic	MER112|DNA|hAT-Charlie	-1483	NM_001004303	199920	Hs.437655	NM_001004303	ENSG00000187889	FYB2	ARAP|C1orf168	FYN binding protein 2	protein-coding
28.4667-11	chr5	156571944	156572282	+	0.1	NA	intron (NM_001128209, intron 3 of 7)	L1MB5|LINE|L1	244949	NM_001128209	6444	Hs.387207	NM_000337	ENSG00000170624	SGCD	35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD	sarcoglycan delta	protein-coding
24.5667-6	chr15	51636944	51637236	+	0.1	NA	Intergenic	MER41-int|LTR|ERV1	-14319	NM_001174116	23312	Hs.511386	NM_015263	ENSG00000104093	DMXL2	DFNA71|PEPNS|RC3	Dmx like 2	protein-coding
13.4667-7	chr5	162836096	162836230	+	0.1	NA	Intergenic	Intergenic	-601408	NM_001364019	900	Hs.79101	NM_004060	ENSG00000113328	CCNG1	CCNG	cyclin G1	protein-coding
29-10	chr3	68371195	68371576	+	0.1	NA	intron (NM_001252216, intron 2 of 4)	L1PA8|LINE|L1	-129252	NR_135532	105377146	Hs.567895	NR_135532		LOC105377146	-	uncharacterized LOC105377146	ncRNA
28.0667-6	chr2	140953376	140953738	+	0.1	NA	intron (NM_018557, intron 18 of 90)	intron (NM_018557, intron 18 of 90)	-366872	NR_106979	102465692		NR_106979	ENSG00000283506	MIR7157	hsa-mir-7157	microRNA 7157	ncRNA
31.7667-4	chr8	134572004	134572352	+	0.1	NA	intron (NM_020863, intron 10 of 15)	L1ME4c|LINE|L1	-25893	NR_002438	594840	Hs.626298	NR_002438	ENSG00000248492	ZFAT-AS1	NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS	ZFAT antisense RNA 1	ncRNA
20.3-11	chr20	19349760	19350016	+	0.1	NA	intron (NM_020689, intron 2 of 16)	intron (NM_020689, intron 2 of 16)	-65292	NR_024564	100130264	Hs.683814	NR_024564	ENSG00000179447	LOC100130264	-	uncharacterized LOC100130264	ncRNA
15.4667-3	chr1	228823829	228824146	+	0.1	NA	Intergenic	L1MDa|LINE|L1	88508	NM_021205	58480	Hs.647774	NM_021205	ENSG00000116574	RHOU	ARHU|CDC42L1|G28K|WRCH1|hG28K	ras homolog family member U	protein-coding
26.5	chr10	99307884	99308239	+	0.1	NA	Intergenic	L1MB7|LINE|L1	-21038	NR_144311	26507	Hs.274579	NM_020348	ENSG00000119946	CNNM1	ACDP1|CLP-1	cyclin and CBS domain divalent metal cation transport mediator 1	protein-coding
15.4-3	chr1	93698565	93698868	+	0.1	NA	intron (NM_001261408, intron 3 of 13)	intron (NM_001261408, intron 3 of 13)	-16879	NM_003567	8412	Hs.36958	NM_003567	ENSG00000137936	BCAR3	AND-34|NSP2|SH2D3B	BCAR3 adaptor protein, NSP family member	protein-coding
16.3667-10	chr7	26876955	26877297	+	0.1	NA	Intergenic	Intergenic	-12536	NM_003930	8935	Hs.200770	NM_003930	ENSG00000005020	SKAP2	PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R	src kinase associated phosphoprotein 2	protein-coding
20.8-15	chr5	38057696	38057989	+	0.1	NA	intron (NR_147009, intron 2 of 2)	L1ME2|LINE|L1	32145	NR_147009	105374731	Hs.570981	NR_147009	ENSG00000248461	LINC02107	-	long intergenic non-protein coding RNA 2107	ncRNA
23.6-22	chr8	132414763	132415185	+	0.1	NA	intron (NM_004519, intron 1 of 14)	intron (NM_004519, intron 1 of 14)	32288	NM_001204824	3786	Hs.374023	NM_004519	ENSG00000184156	KCNQ3	BFNC2|EBN2|KV7.3	potassium voltage-gated channel subfamily Q member 3	protein-coding
34.2-8	chr6	39985480	39986157	+	0.1	NA	Intergenic	MER21B|LTR|ERVL	-51356	NM_001075098	4337	Hs.357128	NM_005942	ENSG00000124615	MOCS1	MIG11|MOCOD|MOCS1A|MOCS1B	molybdenum cofactor synthesis 1	protein-coding
25.4333-12	chr6	38927941	38928350	+	0.1	NA	intron (NM_001371, intron 73 of 91)	intron (NM_001371, intron 73 of 91)	24962	NR_038401	100131047	Hs.670957	NR_038401		LOC100131047	-	uncharacterized LOC100131047	ncRNA
9.53333-7	chr3	171822157	171822268	+	0.1	NA	Intergenic	L2c|LINE|L2	-11729	NM_002662	5337	Hs.382865	NM_002662	ENSG00000075651	PLD1	CVDD	phospholipase D1	protein-coding
43.9333-2	chr1	85389113	85389630	+	0.1	NA	intron (NM_001134445, intron 2 of 6)	MIR|SINE|MIR	15135	NM_001330655	23576	Hs.713411	NM_012137	ENSG00000153904	DDAH1	DDAH|DDAH-1|DDAHI|HEL-S-16	dimethylarginine dimethylaminohydrolase 1	protein-coding
16.6333-5	chr2	213638092	213638420	+	0.1	NA	intron (NR_047660, intron 9 of 14)	L1PB2|LINE|L1	-119811	NR_039640	100616375		NR_039640	ENSG00000265734	MIR4438	-	microRNA 4438	ncRNA
42.0667	chr11	22604695	22605325	+	0.1	NA	Intergenic	L2c|LINE|L2	20831	NM_022725	2188	Hs.632151	NM_022725	ENSG00000183161	FANCF	FAF	FA complementation group F	protein-coding
13.1-4	chr20	9367527	9367701	+	0.1	NA	intron (NM_000933, intron 6 of 35)	intron (NM_000933, intron 6 of 35)	59814	NM_000933	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding
32.0333-3	chr10	110263437	110263955	+	0.1	NA	intron (NM_005962, intron 3 of 5)	intron (NM_005962, intron 3 of 5)	37700	NM_005962	4601	Hs.602078	NM_005962	ENSG00000119950	MXI1	MAD2|MXD2|MXI|bHLHc11	MAX interactor 1, dimerization protein	protein-coding
23.6-10	chr2	218486122	218486489	+	0.1	NA	intron (NM_020935, intron 15 of 25)	intron (NM_020935, intron 15 of 25)	67182	NM_007127	7429	Hs.654595	NM_007127	ENSG00000127831	VIL1	D2S1471|VIL	villin 1	protein-coding
32.6-5	chr3	83645749	83646132	+	0.1	NA	Intergenic	Intergenic	1223635	NR_033860	440970	Hs.411049	NR_033860	ENSG00000242641	LINC00971	-	long intergenic non-protein coding RNA 971	ncRNA
32.0667-2	chr2	98821756	98822076	+	0.1	NA	exon (NM_207362, exon 7 of 10)	exon (NM_207362, exon 7 of 10)	-50018	NR_126337	101927070	Hs.469395	NR_126337		LINC02611	-	long intergenic non-protein coding RNA 2611	ncRNA
13.4-5	chr18	65944357	65944657	+	0.1	NA	Intergenic	L1ME3A|LINE|L1	193495	NM_004361	1005	Hs.541003	NM_004361	ENSG00000081138	CDH7	CDH7L1	cadherin 7	protein-coding
30.8-4	chr17	63977823	63978457	+	0.1	NA	Intergenic	AluSx|SINE|Alu	-5222	NM_000334	6329	Hs.46038	NM_000334	ENSG00000007314	SCN4A	CMS16|HOKPP2|HYKPP|HYPP|NAC1A|Na(V)1.4|Nav1.4|SkM1	sodium voltage-gated channel alpha subunit 4	protein-coding
22.6-2	chr10	98549857	98550120	+	0.1	NA	intron (NM_021828, intron 9 of 11)	intron (NM_021828, intron 9 of 11)	-103025	NM_001322479	3257	Hs.404568	NM_000195	ENSG00000107521	HPS1	BLOC3S1|HPS	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1	protein-coding
28.5667-8	chr19	36684254	36684608	+	0.1	NA	Intergenic	Intergenic	3018	NR_110707	101927621	Hs.125653	NR_110707	ENSG00000225975	LINC01534	-	long intergenic non-protein coding RNA 1534	ncRNA
18.5333-19	chr3	114179124	114179353	+	0.1	NA	promoter-TSS (NM_033663)	promoter-TSS (NM_033663)	-186	NM_000796	1814	Hs.121478	NM_000796	ENSG00000151577	DRD3	D3DR|ETM1|FET1	dopamine receptor D3	protein-coding
9.53333-4	chr21	16205629	16205829	+	0.1	NA	intron (NR_136543, intron 1 of 4)	intron (NR_136543, intron 1 of 4)	11350	NR_027791	388815	Hs.473394	NR_027790		MIR99AHG	C21orf34|C21orf35|LINC00478|MONC	mir-99a-let-7c cluster host gene	ncRNA
24.9667-10	chr5	4905413	4905989	+	0.1	NA	Intergenic	Intergenic	-128658	NR_026994	340094	Hs.665092	NR_026994	ENSG00000215231	LINC01020	-	long intergenic non-protein coding RNA 1020	ncRNA
21.0333-3	chr11	116042432	116042926	+	0.1	NA	Intergenic	Intergenic	-282479	NR_034148	283143	Hs.130499	NR_034148		LINC00900	-	long intergenic non-protein coding RNA 900	ncRNA
18.7333-9	chr16	82445565	82445773	+	0.1	NA	Intergenic	MIR|SINE|MIR	-181300	NM_001220491	1012	Hs.654386	NM_001257	ENSG00000140945	CDH13	CDHH|P105	cadherin 13	protein-coding
13.6-3	chr18	12561671	12561851	+	0.1	NA	intron (NM_020148, intron 2 of 15)	MER46C|DNA|TcMar-Tigger	94971	NM_001128627	56907	Hs.515283	NM_020148	ENSG00000134278	SPIRE1	Spir-1	spire type actin nucleation factor 1	protein-coding
20.5333-6	chr15	90318647	90318935	+	0.1	NA	Intergenic	MER39B|LTR|ERV1	30656	NR_028287	23766	Hs.592014	NR_028287		GABARAPL3	ATG8D	GABA type A receptor associated protein like 3 pseudogene	pseudo
33.2333-5	chr2	219092957	219093300	+	0.1	NA	intron (NM_024782, intron 5 of 7)	intron (NM_024782, intron 5 of 7)	-32207	NM_002181	3549	Hs.654504	NM_002181	ENSG00000163501	IHH	BDA1|HHG2	Indian hedgehog signaling molecule	protein-coding
12.5667-2	chr12	42223230	42223356	+	0.1	NA	intron (NR_135140, intron 2 of 6)	intron (NR_135140, intron 2 of 6)	15075	NM_001190977	10138	Hs.649195	NM_005748	ENSG00000015153	YAF2	-	YY1 associated factor 2	protein-coding
35.7667-5	chr20	59372166	59372651	+	0.1	NA	Intergenic	Intergenic	71797	NM_001302456	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding
24.9-6	chr18	1838728	1839140	+	0.1	NA	Intergenic	Intergenic	-479305	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
26.5-8	chr5	123213081	123213464	+	0.1	NA	Intergenic	Intergenic	-122956	NR_146771	105379152	Hs.537420	NR_146771		LOC105379152	-	uncharacterized LOC105379152	ncRNA
28.9-10	chr8	132965739	132966265	+	0.1	NA	intron (NM_003235, intron 29 of 47)	intron (NM_003235, intron 29 of 47)	80579	NR_107002	102466865		NR_107002	ENSG00000276961	MIR7848	hsa-mir-7848	microRNA 7848	ncRNA
23.3667-8	chr19	22505532	22505870	+	0.1	NA	intron (NR_160728, intron 1 of 1)	intron (NR_160728, intron 1 of 1)	22248	NR_110427	101929124	Hs.589610	NR_110427	ENSG00000260599	LOC101929124	-	uncharacterized LOC101929124	ncRNA
35.3333-12	chr6	163739017	163739684	+	0.1	NA	Intergenic	MIRc|SINE|MIR	-67866	NR_134620	102724152	Hs.738183	NR_134620		LOC102724152	-	uncharacterized LOC102724152	ncRNA
32.8-6	chr2	67449648	67450003	+	0.1	NA	Intergenic	MER39|LTR|ERV1	52492	NM_019002	54465	Hs.353022	NM_019002	ENSG00000143971	ETAA1	ETAA16	ETAA1 activator of ATR kinase	protein-coding
24.1-6	chr3	47722854	47723318	+	0.1	NA	intron (NM_003074, intron 6 of 27)	MER74B|LTR|ERVL	58807	NM_003074	6599	Hs.476179	NM_003074	ENSG00000173473	SMARCC1	BAF155|CRACC1|Rsc8|SRG3|SWI3	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1	protein-coding
24.4333-2	chr10	44175357	44175729	+	0.1	NA	Intergenic	AluJr|SINE|Alu	-117207	NM_001258000	100130539	Hs.694626	NM_001258000	ENSG00000277288	C10orf142	-	chromosome 10 open reading frame 142	protein-coding
28.2333	chr1	5183964	5184449	+	0.1	NA	Intergenic	Intergenic	529597	NM_001042478	55966	Hs.12473	NM_018836	ENSG00000196581	AJAP1	MOT8|SHREW-1|SHREW1	adherens junctions associated protein 1	protein-coding
11.2-3	chr4	72658340	72658485	+	0.1	NA	Intergenic	Intergenic	-89191	NM_014243	9508	Hs.590919	NM_014243	ENSG00000156140	ADAMTS3	ADAMTS-4|HKLLS3	ADAM metallopeptidase with thrombospondin type 1 motif 3	protein-coding
16.2-13	chr4	24827135	24827488	+	0.1	NA	intron (NM_001130726, intron 9 of 11)	intron (NM_001130726, intron 9 of 11)	31738	NM_003102	6649	Hs.2420	NM_003102	ENSG00000109610	SOD3	EC-SOD	superoxide dismutase 3	protein-coding
28-4	chr2	162942949	162943279	+	0.1	NA	Intergenic	L1M2|LINE|L1	-104347	NM_173162	90134	Hs.657413	NM_033272	ENSG00000184611	KCNH7	ERG3|HERG3|Kv11.3	potassium voltage-gated channel subfamily H member 7	protein-coding
29.9667-3	chr10	100593618	100594049	+	0.1	NA	Intergenic	AluJr|SINE|Alu	57890	NM_017902	55662	Hs.500788	NM_017902	ENSG00000166135	HIF1AN	FIH1	hypoxia inducible factor 1 subunit alpha inhibitor	protein-coding
19.9333-11	chr2	177517968	177518502	+	0.1	NA	intron (NM_003659, intron 17 of 19)	AluSq|SINE|Alu	34561	NM_152517	150737	Hs.447659	NM_152517	ENSG00000196659	TTC30B	IFT70|IFT70B|fleer	tetratricopeptide repeat domain 30B	protein-coding
41.4-6	chr8	24888129	24888581	+	0.1	NA	Intergenic	L2b|LINE|L2	-25406	NM_005382	4741	Hs.458657	NM_005382	ENSG00000104722	NEFM	NEF3|NF-M|NFM	neurofilament medium	protein-coding
15.1	chr1	87036334	87036592	+	0.1	NA	intron (NM_012262, intron 1 of 6)	L2c|LINE|L2	-93302	NR_026989	339524	Hs.306423	NM_207357	ENSG00000267272	LINC01140	-	long intergenic non-protein coding RNA 1140	ncRNA
26.3-8	chr5	76234169	76234807	+	0.1	NA	intron (NM_014979, intron 4 of 12)	intron (NM_014979, intron 4 of 12)	151105	NM_014979	22987	Hs.646953	NM_014979	ENSG00000122012	SV2C	-	synaptic vesicle glycoprotein 2C	protein-coding
26.6667-3	chr12	34516604	34516897	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	494254	NM_032834	84920	Hs.102971	NM_032834	ENSG00000139133	ALG10	ALG10A|DIE2|KCR1	ALG10 alpha-1,2-glucosyltransferase	protein-coding
23.3333-9	chr3	89697175	89697476	+	0.1	NA	Intergenic	MER50|LTR|ERV1	589704	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
19.5-8	chr2	172892859	172893204	+	0.1	NA	intron (NM_001282899, intron 1 of 27)	intron (NM_001282899, intron 1 of 27)	32993	NM_001282899	11069	Hs.470646	NM_007023	ENSG00000091428	RAPGEF4	CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496	Rap guanine nucleotide exchange factor 4	protein-coding
18.8667-13	chr9	81238561	81238833	+	0.1	NA	Intergenic	L1M4a1|LINE|L1	450838	NM_001303103	7088	Hs.197320	NM_005077	ENSG00000196781	TLE1	ESG|ESG1|GRG1	TLE family member 1, transcriptional corepressor	protein-coding
14.8667-13	chr9	25253507	25253798	+	0.1	NA	Intergenic	(CTTC)n|Simple_repeat|Simple_repeat	425206	NM_001004125	286319	Hs.26268	NM_001004125	ENSG00000198680	TUSC1	CCDC89B|TSG-9|TSG9	tumor suppressor candidate 1	protein-coding
22.5-11	chr8	105156282	105156734	+	0.1	NA	Intergenic	MLT1G1|LTR|ERVL-MaLR	-161930	NM_012082	23414	Hs.431009	NM_012082	ENSG00000169946	ZFPM2	DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2	zinc finger protein, FOG family member 2	protein-coding
22.4667-11	chr7	88957386	88957801	+	0.1	NA	intron (NM_181646, intron 1 of 3)	intron (NM_181646, intron 1 of 3)	-161856	NM_152706	219557	Hs.112877	NM_152706	ENSG00000164645	TEX47	C7orf62	testis expressed 47	protein-coding
19.2333-6	chr13	88764208	88764494	+	0.1	NA	Intergenic	Intergenic	137498	NR_047490	100861553	Hs.560132	NR_047490	ENSG00000261666	LINC00560	-	long intergenic non-protein coding RNA 560	ncRNA
26.0667-3	chr5	10383904	10384381	+	0.1	NA	intron (NM_005885, intron 4 of 25)	L1ME3|LINE|L1	-18222	NR_162106	113218502		NR_162106		MIR10397	-	microRNA 10397	ncRNA
41.3-8	chr9	27788472	27788942	+	0.1	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	-214841	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
12.4333-8	chr22	29182047	29182271	+	0.1	NA	Intergenic	L1ME1|LINE|L1	-23737	NM_133455	129080	Hs.289106	NM_133455	ENSG00000186998	EMID1	EMI5|EMU1	EMI domain containing 1	protein-coding
19.7667-9	chr4	5814165	5814494	+	0.1	NA	TTS (NM_153717)	TTS (NM_153717)	73484	NM_001288662	1400	Hs.135270	NM_001313	ENSG00000072832	CRMP1	CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3	collapsin response mediator protein 1	protein-coding
39.8333-4	chr4	123613489	123614277	+	0.1	NA	Intergenic	Intergenic	-36108	NR_027105	285419	Hs.535763	NR_027105	ENSG00000249464	LINC01091	-	long intergenic non-protein coding RNA 1091	ncRNA
9.06667-4	chr2	102034861	102035025	+	0.1	NA	Intergenic	MER74A|LTR|ERVL	-35447	NM_001320978	3554	Hs.701982	NM_000877	ENSG00000115594	IL1R1	CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80	interleukin 1 receptor type 1	protein-coding
20.8-13	chr4	171531433	171531926	+	0.1	NA	Intergenic	Arthur1|DNA|hAT-Tip100	107084	NR_147157	105377536	Hs.550719	NR_147157	ENSG00000249297	LINC02174	-	long intergenic non-protein coding RNA 2174	ncRNA
22.2667-11	chr9	126920665	126921166	+	0.1	NA	intron (NM_001366400, intron 1 of 18)	MIRb|SINE|MIR	5476	NM_001366400	9649	Hs.432842	NM_014636	ENSG00000136828	RALGPS1	RALGEF2|RALGPS1A	Ral GEF with PH domain and SH3 binding motif 1	protein-coding
6.86667-3	chr2	197519838	197519906	+	0.1	NA	intron (NM_001204094, intron 1 of 7)	intron (NM_001204094, intron 1 of 7)	3574	NM_001204094	25843	Hs.633165	NM_015387	ENSG00000115540	MOB4	2C4D|CGI-95|MOB1|MOB3|MOBKL3|PHOCN|PREI3	MOB family member 4, phocein	protein-coding
20.6333-4	chr13	94213700	94213986	+	0.1	NA	intron (NM_005708, intron 4 of 8)	MLT1H|LTR|ERVL-MaLR	-25852	NR_046535	100873972	Hs.670344	NR_046535	ENSG00000236520	GPC6-AS1	-	GPC6 antisense RNA 1	ncRNA
8.9-6	chr5	80855255	80855344	+	0.1	NA	intron (NM_002439, intron 21 of 23)	intron (NM_002439, intron 21 of 23)	-105064	NM_006909	5924	Hs.162129	NM_006909	ENSG00000113319	RASGRF2	GRF2|RAS-GRF2	Ras protein specific guanine nucleotide releasing factor 2	protein-coding
10.7667	chr13	61214539	61214726	+	0.1	NA	Intergenic	L2c|LINE|L2	-14752	NR_036128	100422973		NR_036128	ENSG00000266663	MIR3169	-	microRNA 3169	ncRNA
26.0333-5	chr12	115552317	115552659	+	0.1	NA	Intergenic	MER102c|DNA|hAT-Charlie	596166	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA
11.7333-3	chr3	70155657	70155843	+	0.1	NA	Intergenic	Intergenic	156006	NR_110000	101927152	Hs.382046	NR_110000	ENSG00000240405	SAMMSON	LINC01212	survival associated mitochondrial melanoma specific oncogenic non-coding RNA	ncRNA
18.4-7	chr2	174630822	174631178	+	0.1	NA	intron (NM_001077269, intron 1 of 7)	intron (NM_001077269, intron 1 of 7)	3605	NM_003387	7456	Hs.128067	NM_003387	ENSG00000115935	WIPF1	PRPL-2|WAS2|WASPIP|WIP	WAS/WASL interacting protein family member 1	protein-coding
20.4-4	chr10	107163071	107163389	+	0.1	NA	intron (NM_001206569, intron 1 of 25)	intron (NM_001206569, intron 1 of 25)	1476	NM_001206571	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
28.3667-3	chr7	83730574	83731145	+	0.1	NA	Intergenic	L2a|LINE|L2	-81720	NM_012431	9723	Hs.440730	NM_012431	ENSG00000170381	SEMA3E	M-SEMAH|M-SemaK|SEMAH|coll-5	semaphorin 3E	protein-coding
17.1-8	chr14	69710197	69710515	+	0.1	NA	intron (NM_014734, intron 5 of 5)	intron (NM_014734, intron 5 of 5)	-56786	NM_001320214	6430	Hs.632326	NM_006925	ENSG00000100650	SRSF5	HRS|SFRS5|SRP40	serine and arginine rich splicing factor 5	protein-coding
28.7333-6	chr11	127682001	127682567	+	0.1	NA	Intergenic	AluSx|SINE|Alu	411214	NR_120580	101929497	Hs.737442	NR_120580	ENSG00000273409	LINC02712	-	long intergenic non-protein coding RNA 2712	ncRNA
18.6-10	chr16	23591578	23591835	+	0.1	NA	intron (NM_005003, intron 1 of 4)	intron (NM_005003, intron 1 of 4)	4610	NM_005003	4706	Hs.189716	NM_005003	ENSG00000004779	NDUFAB1	ACP|ACP1|FASN2A|SDAP	NADH:ubiquinone oxidoreductase subunit AB1	protein-coding
34.1-4	chr4	112418472	112419059	+	0.1	NA	intron (NM_001102406, intron 5 of 15)	L1MEd|LINE|L1	-96614	NR_161159	105377372		NR_161159		LOC105377372	-	uncharacterized LOC105377372	ncRNA
11.8333-2	chr10	47214627	47214815	+	0.1	NA	Intergenic	Intergenic	-85476	NM_004962	2662	Hs.2171	NM_004962	ENSG00000266524	GDF10	BIP|BMP-3b|BMP3B	growth differentiation factor 10	protein-coding
25.0667-6	chr18	52777303	52777866	+	0.1	NA	intron (NM_005215, intron 2 of 28)	MLT1D|LTR|ERVL-MaLR	437387	NM_005215	1630	Hs.162025	NM_005215	ENSG00000187323	DCC	CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1	DCC netrin 1 receptor	protein-coding
12.5-4	chr2	99968000	99968209	+	0.1	NA	intron (NM_001025108, intron 6 of 23)	intron (NM_001025108, intron 6 of 23)	137479	NM_001025108	3899	Hs.444414	NM_002285	ENSG00000144218	AFF3	LAF4|MLLT2-like	AF4/FMR2 family member 3	protein-coding
17.1	chr1	109134379	109134644	+	0.1	NA	intron (NM_001284352, intron 1 of 20)	intron (NM_001284352, intron 1 of 20)	20396	NM_001284352	57535	Hs.708190	NM_020775	ENSG00000116299	KIAA1324	EIG121	KIAA1324	protein-coding
28.9333-10	chr4	60094934	60095433	+	0.1	NA	Intergenic	L1MC3|LINE|L1	-827436	NR_039652	100616450		NR_039652	ENSG00000265829	MIR548AG1	-	microRNA 548ag-1	ncRNA
31.3667-8	chr5	24181646	24182090	+	0.1	NA	Intergenic	Intergenic	230520	NR_131245	439936	Hs.638078	NR_131245	ENSG00000248874	C5orf17	-	chromosome 5 open reading frame 17 (putative)	ncRNA
33.2333-2	chr10	66216694	66217098	+	0.1	NA	intron (NM_001127384, intron 13 of 17)	L1MD2|LINE|L1	645471	NR_120647	101928913	Hs.568857	NR_120647		LINC01515	-	long intergenic non-protein coding RNA 1515	ncRNA
27.4667-11	chr8	82784785	82785271	+	0.1	NA	Intergenic	Intergenic	-127076	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
14.1667-4	chr2	7594693	7594847	+	0.1	NA	Intergenic	Intergenic	173509	NR_038432	100506274	Hs.177930	NR_038432	ENSG00000229727	LOC100506274	-	uncharacterized LOC100506274	ncRNA
16.1333-12	chr2	123314449	123314716	+	0.1	NA	Intergenic	Intergenic	-241101	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
13.3333	chr1	88887267	88887450	+	0.1	NA	exon (NM_001514, exon 2 of 7)	exon (NM_001514, exon 2 of 7)	4209	NM_001514	2959	Hs.481852	NM_001514	ENSG00000137947	GTF2B	TF2B|TFIIB	general transcription factor IIB	protein-coding
30.4	chr11	88424192	88424656	+	0.1	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	-80152	NR_049724	100873989	Hs.616625	NR_049724	ENSG00000255082	GRM5-AS1	-	GRM5 antisense RNA 1	ncRNA
30.7667-3	chr11	70312249	70312901	+	0.1	NA	intron (NR_045286, intron 2 of 28)	MER5B|DNA|hAT-Charlie	28620	NR_031624	100313770		NR_031624	ENSG00000221333	MIR548K	MIRN548K	microRNA 548k	ncRNA
26.9-2	chr10	111988533	111988895	+	0.1	NA	Intergenic	MSTA|LTR|ERVL-MaLR	195051	NM_020918	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
27.1667-8	chr5	179391899	179392425	+	0.1	NA	Intergenic	L1ME2|LINE|L1	-46701	NM_021599	9509	Hs.23871	NM_014244	ENSG00000087116	ADAMTS2	ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI	ADAM metallopeptidase with thrombospondin type 1 motif 2	protein-coding
27.5-4	chr17	58147461	58148042	+	0.1	NA	Intergenic	L1MB7|LINE|L1	-7403	NM_012374	26689	Hs.531188	NM_012374	ENSG00000141194	OR4D1	OR17-23|OR4D3|OR4D4P|TPCR16	olfactory receptor family 4 subfamily D member 1	protein-coding
21.7333-8	chr3	108273332	108273771	+	0.1	NA	Intergenic	L1PA4|LINE|L1	-22939	NM_001282559	11148	Hs.225968	NM_007072	ENSG00000114455	HHLA2	B7-H5|B7-H7|B7H7|B7y	HERV-H LTR-associating 2	protein-coding
19.0333-9	chr22	34953319	34953667	+	0.1	NA	intron (NR_138042, intron 1 of 4)	L2a|LINE|L2	44423	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
29.9667-6	chr6	136811677	136811976	+	0.1	NA	Intergenic	Intergenic	-10766	NM_000288	5191	Hs.280932	NM_000288	ENSG00000112357	PEX7	PBD9B|PTS2R|RCDP1|RD	peroxisomal biogenesis factor 7	protein-coding
29.4-9	chr5	39804566	39805154	+	0.1	NA	Intergenic	Intergenic	-247431	NR_104633	102467077	Hs.148993	NR_104633		LINC00603	-	long intergenic non-protein coding RNA 603	ncRNA
30.2667-6	chr5	19116129	19116660	+	0.1	NA	Intergenic	L1PA13|LINE|L1	769878	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
20.0667-18	chr8	122421222	122421467	+	0.1	NA	intron (NR_131202, intron 2 of 3)	intron (NR_131202, intron 2 of 3)	147300	NR_131202	105375734	Hs.628341	NR_131202		SMILR	-	smooth muscle induced lncRNA, enhancer of proliferation	ncRNA
22.8667-2	chr11	99708447	99708896	+	0.1	NA	intron (NM_175566, intron 1 of 21)	intron (NM_175566, intron 1 of 21)	152526	NM_175566	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
17.8333-9	chr6	121948015	121948471	+	0.1	NA	Intergenic	L1PB1|LINE|L1	-451308	NM_001135564	3298	Hs.158195	NM_004506	ENSG00000025156	HSF2	HSF 2|HSTF 2	heat shock transcription factor 2	protein-coding
14.1-6	chr6	7427306	7427624	+	0.1	NA	Intergenic	AluSq|SINE|Alu	37636	NM_001348194	83732	Hs.437474	NM_031480	ENSG00000124784	RIOK1	AD034|RIO1|RRP10|bA288G3.1	RIO kinase 1	protein-coding
18.7333-5	chr12	10383925	10384344	+	0.1	NA	intron (NR_120430, intron 3 of 3)	L1MA5|LINE|L1	5907	NM_007360	22914	Hs.387787	NM_007360	ENSG00000213809	KLRK1	CD314|D12S2489E|KLR|NKG2-D|NKG2D	killer cell lectin like receptor K1	protein-coding
24.8667-6	chr3	126175273	126175802	+	0.1	NA	intron (NM_001270364, intron 1 of 22)	L1MC2|LINE|L1	-4528	NR_046383	100862662	Hs.633362	NR_046383	ENSG00000246022	ALDH1L1-AS2	-	ALDH1L1 antisense RNA 2	ncRNA
33.6	chr1	27520796	27521214	+	0.1	NA	Intergenic	MIRc|SINE|MIR	-30838	NM_006990	10163	Hs.469244	NM_006990	ENSG00000158195	WASF2	IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2	WASP family member 2	protein-coding
19.0333-11	chr4	89571136	89571355	+	0.1	NA	Intergenic	L2|LINE|L2	-263445	NM_198281	285513	Hs.100912	NM_198281	ENSG00000185477	GPRIN3	GRIN3	GPRIN family member 3	protein-coding
24.4667-7	chr2	34613300	34613680	+	0.1	NA	Intergenic	(ATAAGT)n|Simple_repeat|Simple_repeat	-64067	NR_126404	104355288	Hs.624529	NR_126404	ENSG00000228262	LINC01320	-	long intergenic non-protein coding RNA 1320	ncRNA
30.2-8	chr21	29787133	29787650	+	0.1	NA	intron (NM_000830, intron 1 of 16)	intron (NM_000830, intron 1 of 16)	39216	NR_027021	642976	Hs.473554	NR_027021		GRIK1-AS1	C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110	GRIK1 antisense RNA 1	ncRNA
39.3-5	chr4	4269822	4270470	+	0.1	NA	intron (NM_017816, intron 8 of 9)	AluJo|SINE|Alu	19875	NM_001145725	55646	Hs.425427	NM_017816	ENSG00000145220	LYAR	ZC2HC2|ZLYAR	Ly1 antibody reactive	protein-coding
36.7333-2	chr15	70232439	70232969	+	0.1	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-134787	NM_001282980	7090	Hs.287362	NM_005078	ENSG00000140332	TLE3	ESG|ESG3|GRG3|HsT18976	TLE family member 3, transcriptional corepressor	protein-coding
30.3333-3	chr14	56757439	56758139	+	0.1	NA	Intergenic	Intergenic	47878	NM_001270525	5015	Hs.288655	NM_021728	ENSG00000165588	OTX2	CPHD6|MCOPS5	orthodenticle homeobox 2	protein-coding
25.5333-5	chr2	107472311	107472796	+	0.1	NA	Intergenic	L1MEf|LINE|L1	-56866	NR_146968	105373537		NR_146968	ENSG00000224568	LINC01886	-	long intergenic non-protein coding RNA 1886	ncRNA
32.1667-3	chr11	99175876	99176236	+	0.1	NA	intron (NM_001243270, intron 1 of 23)	L2a|LINE|L2	155107	NM_001243270	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
33.4333-6	chr21	15090240	15090765	+	0.1	NA	Intergenic	L1ME3Cz|LINE|L1	-25502	NM_003489	8204	Hs.155017	NM_003489	ENSG00000180530	NRIP1	CAKUT3|RIP140	nuclear receptor interacting protein 1	protein-coding
18.3-8	chr5	170528572	170528985	+	0.1	NA	intron (NM_001278339, intron 1 of 7)	intron (NM_001278339, intron 1 of 7)	24758	NM_001034837	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding
25-13	chr7	100713124	100713605	+	0.1	NA	Intergenic	AluSx4|SINE|Alu	-7104	NM_000799	2056	Hs.2303	NM_000799	ENSG00000130427	EPO	DBAL|ECYT5|EP|MVCD2	erythropoietin	protein-coding
21.3-6	chr15	52831426	52831667	+	0.1	NA	Intergenic	L1ME4c|LINE|L1	-41210	NM_004498	3175	Hs.555318	NM_004498	ENSG00000169856	ONECUT1	HNF-6|HNF6|HNF6A	one cut homeobox 1	protein-coding
18-19	chr9	17310447	17310682	+	0.1	NA	intron (NM_001365029, intron 8 of 25)	L1ME3F|LINE|L1	175524	NM_001286984	54875	Hs.435381	NM_017738	ENSG00000044459	CNTLN	C9orf101|C9orf39|bA340N12.1	centlein	protein-coding
19.0667-10	chr9	81793442	81793719	+	0.1	NA	Intergenic	Intergenic	103867	NR_109772	101927502	Hs.528628	NR_109772	ENSG00000233926	LOC101927502	-	uncharacterized LOC101927502	ncRNA
9.4-3	chr17	70034511	70034628	+	0.1	NA	Intergenic	Intergenic	-16702	NR_104129	101928141	Hs.639899	NR_104129	ENSG00000267603	LINC01028	TCONS_00025127	long intergenic non-protein coding RNA 1028	ncRNA
18.9-18	chr8	122840952	122841305	+	0.1	NA	intron (NM_001362797, intron 1 of 4)	intron (NM_001362797, intron 1 of 4)	59473	NM_001362797	22882	Hs.377090	NM_014943	ENSG00000178764	ZHX2	AFR1|RAF	zinc fingers and homeoboxes 2	protein-coding
23.3667-12	chr3	171217283	171217649	+	0.1	NA	intron (NM_001161563, intron 3 of 31)	L1PA16|LINE|L1	-110707	NR_030295	693154		NR_030295	ENSG00000207963	MIR569	MIRN569|hsa-mir-569	microRNA 569	ncRNA
24.2667-6	chr2	115044274	115044747	+	0.1	NA	intron (NM_001321910, intron 2 of 26)	MSTA|LTR|ERVL-MaLR	-20063	NM_001178037	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
22.9667-5	chr14	45470717	45471057	+	0.1	NA	Intergenic	Intergenic	-217685	NM_018353	55320	Hs.732769	NM_018353	ENSG00000129534	MIS18BP1	C14orf106|HSA242977|KNL2|M18BP1	MIS18 binding protein 1	protein-coding
6.16667	chr19	52068937	52068998	+	0.1	NA	intron (NM_001369830, intron 2 of 2)	AluSz6|SINE|Alu	-20129	NM_014650	9668	Hs.655934	NM_014650	ENSG00000256087	ZNF432	-	zinc finger protein 432	protein-coding
8.96667-2	chr15	33200650	33200739	+	0.1	NA	Intergenic	Intergenic	-5961	NM_001277313	342184	Hs.657649	NM_198500	ENSG00000248905	FMN1	FMN|LD	formin 1	protein-coding
21.1333-5	chr11	72335496	72335873	+	0.1	NA	intron (NM_030813, intron 6 of 16)	L2c|LINE|L2	-91508	NM_005169	401	Hs.731115	NM_005169	ENSG00000165462	PHOX2A	ARIX|CFEOM2|FEOM2|NCAM2|PMX2A	paired like homeobox 2A	protein-coding
15.7-12	chr7	20155223	20155573	+	0.1	NA	intron (NM_182762, intron 5 of 6)	MER44A|DNA|TcMar-Tigger	13482	NR_046756	100874041	Hs.145104	NR_046756	ENSG00000228598	MACC1-AS1	-	MACC1 antisense RNA 1	ncRNA
15.7333-17	chr7	104746994	104747245	+	0.1	NA	intron (NM_199000, intron 2 of 2)	intron (NM_199000, intron 2 of 2)	56973	NR_034142	645591	Hs.658835	NR_034141	ENSG00000226869	LHFPL3-AS1	-	LHFPL3 antisense RNA 1	ncRNA
15.5333-5	chr2	118363580	118363753	+	0.1	NA	Intergenic	L1MB4|LINE|L1	-177280	NR_144530	100506797	Hs.116176	NR_144530	ENSG00000226856	THORLNC	THOR	testis associated oncogenic lncRNA	ncRNA
32.3667	chr11	11622116	11622511	+	0.1	NA	promoter-TSS (NM_198516)	promoter-TSS (NM_198516)	-308	NM_198516	374378	Hs.655152	NM_198516	ENSG00000110328	GALNT18	GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18	polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
36.7333-6	chr5	51521050	51521620	+	0.1	NA	Intergenic	Intergenic	137887	NM_002202	3670	Hs.505	NM_002202	ENSG00000016082	ISL1	ISLET1|Isl-1	ISL LIM homeobox 1	protein-coding
38.2667-2	chr3	128573803	128574438	+	0.1	NA	non-coding (NR_125802, exon 3 of 3)	non-coding (NR_125802, exon 3 of 3)	1966	NR_125802	23434	Hs.194283	NM_007354	ENSG00000198685	LINC01565	C3orf27|GR6	long intergenic non-protein coding RNA 1565	ncRNA
18.3333-9	chr20	9796762	9797079	+	0.1	NA	intron (NM_177990, intron 1 of 9)	L1P1|LINE|L1	42156	NM_177990	57144	Hs.32539	NM_020341	ENSG00000101349	PAK5	PAK7	p21 (RAC1) activated kinase 5	protein-coding
11.8333	chr1	231048693	231048962	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-8573	NM_198552	375061	Hs.38516	NM_198552	ENSG00000182118	FAM89A	C1orf153	family with sequence similarity 89 member A	protein-coding
20.2-13	chr6	51808095	51808602	+	0.1	NA	intron (NM_138694, intron 52 of 66)	L1ME4b|LINE|L1	186478	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
23.7667-10	chr2	42124977	42125214	+	0.1	NA	Intergenic	L1ME4c|LINE|L1	-44258	NM_001145076	27436	Hs.713173	NM_019063	ENSG00000143924	EML4	C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120	EMAP like 4	protein-coding
33.9-4	chr6	92905239	92905649	+	0.1	NA	Intergenic	L2a|LINE|L2	514115	NM_001288629	2045	Hs.73962	NM_004440	ENSG00000135333	EPHA7	EHK-3|EHK3|EK11|HEK11	EPH receptor A7	protein-coding
26.4-3	chr11	79131042	79131438	+	0.1	NA	intron (NM_001098816, intron 4 of 33)	L1PB1|LINE|L1	270869	NR_030598	100126333		NR_030598	ENSG00000211997	MIR708	MIRN708|hsa-mir-708	microRNA 708	ncRNA
22.6333-16	chr7	63913042	63913424	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-85573	NR_145488	100419780	Hs.742917	NR_145488		ZNF722P	ZNF722	zinc finger protein 722, pseudogene	pseudo
19.9333-8	chr19	7221075	7221465	+	0.1	NA	intron (NM_001079817, intron 2 of 20)	AluSz|SINE|Alu	73144	NM_001079817	3643	Hs.465744	NM_000208	ENSG00000171105	INSR	CD220|HHF5	insulin receptor	protein-coding
11.0333	chr11	8844515	8844668	+	0.1	NA	intron (NM_005418, intron 2 of 22)	Charlie2b|DNA|hAT-Charlie	-33256	NM_139157	6764	Hs.117715	NM_005418	ENSG00000166444	ST5	DENND2B|HTS1|p126	suppression of tumorigenicity 5	protein-coding
23.6333-2	chr10	18657930	18658220	+	0.1	NA	intron (NM_001351116, intron 1 of 11)	intron (NM_001351116, intron 1 of 11)	1163	NM_001351116	221078	Hs.396175	NM_182543	ENSG00000241058	NSUN6	4933414E04Rik|ARL5B-AS1|NOPD1	NOP2/Sun RNA methyltransferase 6	protein-coding
10.9333-6	chr13	68346353	68346540	+	0.1	NA	Intergenic	L2|LINE|L2	538879	NR_038878	338862		NR_038878	ENSG00000281778	LINC00550	-	long intergenic non-protein coding RNA 550	ncRNA
25.8-2	chr11	3686880	3687363	+	0.1	NA	intron (NR_157590, intron 27 of 31)	AluJb|SINE|Alu	-15737	NM_020402	57053	Hs.732806	NM_020402	ENSG00000129749	CHRNA10	-	cholinergic receptor nicotinic alpha 10 subunit	protein-coding
15.3-9	chr7	40595370	40595654	+	0.1	NA	intron (NM_001193312, intron 11 of 12)	intron (NM_001193312, intron 11 of 12)	384427	NR_110831	101928744	Hs.639767	NR_110831	ENSG00000232458	LINC01450	-	long intergenic non-protein coding RNA 1450	ncRNA
26.1-11	chr3	106213053	106213563	+	0.1	NA	Intergenic	Intergenic	-343907	NR_135810	868	Hs.430589	NM_170662	ENSG00000114423	CBLB	Cbl-b|Nbla00127|RNF56	Cbl proto-oncogene B	protein-coding
10.9-6	chr5	161605636	161605864	+	0.1	NA	Intergenic	Intergenic	-57346	NM_000813	2561	Hs.303527	NM_000813	ENSG00000145864	GABRB2	ICEE2	gamma-aminobutyric acid type A receptor beta2 subunit	protein-coding
35.9667-5	chr6	75313657	75314016	+	0.1	NA	exon (NM_001289987, exon 6 of 7)	exon (NM_001289987, exon 6 of 7)	28822	NR_040081	100506804	Hs.743708	NR_040081		LOC100506804	-	uncharacterized LOC100506804	ncRNA
12.7667-6	chr7	92787355	92787516	+	0.1	NA	intron (NM_001259, intron 2 of 7)	intron (NM_001259, intron 2 of 7)	46524	NM_001259	1021	Hs.119882	NM_001259	ENSG00000105810	CDK6	MCPH12|PLSTIRE	cyclin dependent kinase 6	protein-coding
12.9667-8	chr3	174049577	174049840	+	0.1	NA	intron (NM_001365928, intron 4 of 6)	intron (NM_001365928, intron 4 of 6)	-128912	NR_046664	100874010	Hs.624265	NR_046664	ENSG00000228213	NLGN1-AS1	-	NLGN1 antisense RNA 1	ncRNA
20.8-3	chr10	20111546	20111856	+	0.1	NA	intron (NM_032812, intron 4 of 13)	intron (NM_032812, intron 4 of 13)	295269	NM_032812	84898	Hs.99472	NM_032812	ENSG00000120594	PLXDC2	TEM7R	plexin domain containing 2	protein-coding
17.8333-8	chr6	58780898	58781192	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	-819599	NR_132997	106660613	Hs.561539	NR_003660	ENSG00000283352	LINC00680-GUSBP4	-	LINC00680-GUSBP4 readthrough	pseudo
30.2-17	chr9	120174190	120174598	+	0.1	NA	Intergenic	MIRb|SINE|MIR	70656	NR_029604	406939		NR_029604	ENSG00000207814	MIR147A	MIR147|MIRN147|hsa-mir-147a	microRNA 147a	ncRNA
22.6333-6	chr14	45089254	45089662	+	0.1	NA	intron (NM_017922, intron 1 of 13)	L1M3|LINE|L1	5342	NM_017922	55015	Hs.274337	NM_017922	ENSG00000185246	PRPF39	-	pre-mRNA processing factor 39	protein-coding
11.9-2	chr2	219607437	219607574	+	0.1	NA	intron (NM_052902, intron 13 of 24)	AluJr4|SINE|Alu	9648	NM_052902	114790	Hs.22410	NM_052902	ENSG00000144589	STK11IP	LIP1|LKB1IP|STK11IP1	serine/threonine kinase 11 interacting protein	protein-coding
8.63333-7	chr5	93918131	93918264	+	0.1	NA	intron (NR_028080, intron 4 of 8)	intron (NR_028080, intron 4 of 8)	-176597	NM_153216	134187	Hs.678995	NM_153216	ENSG00000248483	POU5F2	SPRM-1	POU domain class 5, transcription factor 2	protein-coding
14.2-7	chr9	32766435	32766590	+	0.1	NA	Intergenic	Intergenic	-17028	NM_212558	401498	Hs.522063	NM_212558	ENSG00000188133	TMEM215	-	transmembrane protein 215	protein-coding
35.0667-4	chr7	19525313	19525965	+	0.1	NA	Intergenic	Intergenic	179797	NR_036101	100422967		NR_036101	ENSG00000265932	MIR3146	mir-3146	microRNA 3146	ncRNA
27.0667-2	chr10	81476820	81477247	+	0.1	NA	Intergenic	L1M5|LINE|L1	-398161	NM_001370083	10718	Hs.125119	NM_001010848	ENSG00000185737	NRG3	HRG3|pro-NRG3	neuregulin 3	protein-coding
17.2-5	chr20	18275305	18275723	+	0.1	NA	Intergenic	Intergenic	-12714	NM_001283006	7692	Hs.472221	NM_003434	ENSG00000125846	ZNF133	ZNF150|pHZ-13|pHZ-66	zinc finger protein 133	protein-coding
11.5667-7	chr7	5574060	5574210	+	0.1	NA	Intergenic	AluSx|SINE|Alu	-18681	NM_003088	6624	Hs.118400	NM_003088	ENSG00000075618	FSCN1	FAN1|HSN|SNL|p55	fascin actin-bundling protein 1	protein-coding
19.1667	chr1	65017035	65017405	+	0.1	NA	intron (NM_001321853, intron 2 of 26)	AluSx|SINE|Alu	-14744	NR_119383	101927084	Hs.734218	NR_119383	ENSG00000226891	LINC01359	-	long intergenic non-protein coding RNA 1359	ncRNA
15.3333-12	chr8	137908371	137908568	+	0.1	NA	intron (NR_161374, intron 2 of 7)	MER9a2|LTR|ERVK	175076	NR_161374	401478	Hs.654931	NM_001354876		LOC401478	-	uncharacterized LOC401478	ncRNA
34.4333-10	chr2	19445013	19445744	+	0.1	NA	Intergenic	L1MD3|LINE|L1	-86755	NM_145260	130497	Hs.123933	NM_145260	ENSG00000143867	OSR1	ODD	odd-skipped related transcription factor 1	protein-coding
21.0333-5	chr12	13927016	13927348	+	0.1	NA	intron (NM_000834, intron 1 of 12)	L3|LINE|CR1	53174	NM_000834	2904	Hs.504844	NM_000834	ENSG00000273079	GRIN2B	EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3	glutamate ionotropic receptor NMDA type subunit 2B	protein-coding
30.1667	chr15	83532469	83532882	+	0.1	NA	intron (NM_001324186, intron 2 of 9)	MLT1J|LTR|ERVL-MaLR	42061	NM_001324187	6457	Hs.270055	NM_003027	ENSG00000140600	SH3GL3	CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13	SH3 domain containing GRB2 like 3, endophilin A3	protein-coding
26.1667-10	chr7	36383002	36383332	+	0.1	NA	intron (NM_001100425, intron 2 of 6)	(AATCATT)n|Simple_repeat|Simple_repeat	-6695	NM_001284302	54443	Hs.62180	NM_018685	ENSG00000011426	ANLN	FSGS8|Scraps|scra	anillin actin binding protein	protein-coding
34.7667-3	chr11	63527208	63527676	+	0.1	NA	Intergenic	AluSc8|SINE|Alu	-9366	NM_004585	5920	Hs.17466	NM_004585	ENSG00000133321	PLAAT4	HRASLS4|HRSL4|PLA1/2-3|PLAAT-4|RARRES3|RIG1|TIG3	phospholipase A and acyltransferase 4	protein-coding
46.5-4	chr5	33141173	33141865	+	0.1	NA	Intergenic	MSTD|LTR|ERVL-MaLR	-88216	NR_147008	105374716	Hs.582475	NR_147008	ENSG00000251443	LINC02160	-	long intergenic non-protein coding RNA 2160	ncRNA
14.9333-3	chr10	72428665	72428980	+	0.1	NA	intron (NM_001195519, intron 3 of 6)	intron (NM_001195519, intron 3 of 6)	-73903	NM_001365080	54788	Hs.500013	NM_017626	ENSG00000148719	DNAJB12	DJ10	DnaJ heat shock protein family (Hsp40) member B12	protein-coding
29.0333-6	chr9	105035878	105036270	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-107919	NM_005502	19	Hs.659274	NM_005502	ENSG00000165029	ABCA1	ABC-1|ABC1|CERP|HDLDT1|TGD	ATP binding cassette subfamily A member 1	protein-coding
48.2-5	chr8	78437450	78438174	+	0.1	NA	Intergenic	MLT2B1|LTR|ERVL	-78528	NM_006823	5569	Hs.433700	NM_006823	ENSG00000171033	PKIA	PRKACN1	cAMP-dependent protein kinase inhibitor alpha	protein-coding
26.7333-20	chr8	118728191	118728877	+	0.1	NA	Intergenic	L1PB1|LINE|L1	-106571	NM_001363274	401474	Hs.359393	NM_207506	ENSG00000177570	SAMD12	-	sterile alpha motif domain containing 12	protein-coding
31-10	chr8	55521253	55521752	+	0.1	NA	promoter-TSS (NR_134323)	promoter-TSS (NR_134323)	-524	NR_134323	105375843	Hs.662416	NR_134323	ENSG00000254357	LOC105375843	-	uncharacterized LOC105375843	ncRNA
26.1-5	chr11	117651581	117652187	+	0.1	NA	intron (NM_020693, intron 3 of 32)	intron (NM_020693, intron 3 of 32)	145332	NM_001367904	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding
32.0333-6	chr3	96055471	96056076	+	0.1	NA	Intergenic	Intergenic	-304191	NR_107027	102465864		NR_107027	ENSG00000278103	MIR8060	hsa-mir-8060	microRNA 8060	ncRNA
18.0667-10	chr3	88455911	88456091	+	0.1	NA	intron (NM_001368168, intron 2 of 2)	L1MA9|LINE|L1	117545	NM_001368165	111064647		NM_001368165		CSNKA2IP	-	casein kinase 2 subunit alpha' interacting protein	protein-coding
19.8333	chr1	159137223	159137651	+	0.1	NA	Intergenic	AluSz|SINE|Alu	-34178	NM_001127173	57863	Hs.365689	NM_021189	ENSG00000162706	CADM3	BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3	cell adhesion molecule 3	protein-coding
19.9333-13	chr20	35170155	35170652	+	0.1	NA	intron (NM_001355008, intron 4 of 14)	intron (NM_001355008, intron 4 of 14)	-1669	NM_006404	10544	Hs.647450	NM_006404	ENSG00000101000	PROCR	CCCA|CCD41|EPCR	protein C receptor	protein-coding
15.0333-6	chr14	42203344	42203570	+	0.1	NA	Intergenic	LTR36|LTR|ERV1	596601	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
19.5-3	chr10	94673953	94674157	+	0.1	NA	Intergenic	HERVL74-int|LTR|ERVL	-9674	NM_001128925	1562	Hs.511872	NM_000772	ENSG00000108242	CYP2C18	CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17	cytochrome P450 family 2 subfamily C member 18	protein-coding
17.5-8	chr2	46352394	46352748	+	0.1	NA	intron (NM_001430, intron 2 of 15)	intron (NM_001430, intron 2 of 15)	41596	NR_146999	105374582	Hs.570163	NR_146999	ENSG00000228100	LINC01820	-	long intergenic non-protein coding RNA 1820	ncRNA
26.6333-10	chr8	50186246	50186591	+	0.1	NA	intron (NR_135797, intron 2 of 20)	L1PA8|LINE|L1	22287	NM_001321778	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
31.5-10	chr19	50926187	50926528	+	0.1	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-15619	NM_004917	9622	Hs.218366	NM_004917	ENSG00000167749	KLK4	AI2A1|ARM1|EMSP|EMSP1|KLK-L1|PRSS17|PSTS|kallikrein	kallikrein related peptidase 4	protein-coding
40.7	chr1	200891185	200891783	+	0.1	NA	promoter-TSS (NM_018265)	promoter-TSS (NM_018265)	-47	NM_018265	55765	Hs.518997	NM_018265	ENSG00000163362	INAVA	C1orf106	innate immunity activator	protein-coding
35.0333-2	chr14	52759391	52759806	+	0.1	NA	intron (NM_001130701, intron 9 of 11)	intron (NM_001130701, intron 9 of 11)	29432	NM_001130701	6815	Hs.364980	NM_145251	ENSG00000198252	STYX	-	serine/threonine/tyrosine interacting protein	protein-coding
24.7333-9	chr20	19720530	19720893	+	0.1	NA	intron (NM_020689, intron 16 of 16)	intron (NM_020689, intron 16 of 16)	-165810	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding
30.3667-4	chr2	58588397	58589131	+	0.1	NA	intron (NR_033873, intron 1 of 13)	AluJb|SINE|Alu	68011	NR_033873	400955	Hs.503210	NR_033873	ENSG00000233723	LINC01122	-	long intergenic non-protein coding RNA 1122	ncRNA
23.5333	chr1	41025155	41025474	+	0.1	NA	intron (NR_037868, intron 1 of 3)	MIRb|SINE|MIR	-3559	NM_001168247	200172	Hs.194609	NM_144990	ENSG00000171790	SLFNL1	-	schlafen like 1	protein-coding
17.8	chr10	70778925	70779230	+	0.1	NA	intron (NR_134531, intron 5 of 9)	MamRep38|DNA|hAT	3496	NR_134534	219793	Hs.386698	NM_152710	ENSG00000166220	TBATA	C10orf27|SPATIAL	thymus, brain and testes associated	protein-coding
18.9667-4	chr16	19370387	19370630	+	0.1	NA	Intergenic	FLAM_A|SINE|Alu	-40031	NM_001308161	79838	Hs.115838	NM_024780	ENSG00000103534	TMC5	-	transmembrane channel like 5	protein-coding
22.4333-10	chr2	220686763	220687271	+	0.1	NA	Intergenic	Intergenic	-780452	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA
42.7-2	chr1	116350354	116351035	+	0.1	NA	Intergenic	L1MB3|LINE|L1	-22550	NM_000701	476	Hs.371889	NM_000701	ENSG00000163399	ATP1A1	CMT2DD|HOMGSMR2	ATPase Na+/K+ transporting subunit alpha 1	protein-coding
29.8667-2	chr2	127292570	127293129	+	0.1	NA	intron (NM_001303418, intron 2 of 14)	intron (NM_001303418, intron 2 of 14)	1295	NM_001303416	2071	Hs.469872	NM_000122	ENSG00000163161	ERCC3	BTF2|GTF2H|RAD25|TFIIH|TTD2|XPB	ERCC excision repair 3, TFIIH core complex helicase subunit	protein-coding
25.7-4	chr11	2376900	2377280	+	0.1	NA	promoter-TSS (NM_004356)	promoter-TSS (NM_004356)	-227	NM_004356	975	Hs.54457	NM_004356	ENSG00000110651	CD81	CVID6|S5.7|TAPA1|TSPAN28	CD81 molecule	protein-coding
25.3-14	chr5	147464566	147464925	+	0.1	NA	intron (NM_001197294, intron 1 of 13)	ERV3-16A3_I-int|LTR|ERVL	-11053	NM_001387	1809	Hs.519659	NM_001387	ENSG00000113657	DPYSL3	CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1	dihydropyrimidinase like 3	protein-coding
24.0333-15	chr8	107928907	107929414	+	0.1	NA	intron (NM_001282863, intron 4 of 4)	intron (NM_001282863, intron 4 of 4)	152779	NM_001317942	340419	Hs.444834	NM_178565	ENSG00000147655	RSPO2	CRISTIN2|HHRRD|TETAMS2	R-spondin 2	protein-coding
20.6333-9	chr20	46237489	46237732	+	0.1	NA	intron (NM_021248, intron 3 of 11)	intron (NM_021248, intron 3 of 11)	70888	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding
34.5667	chr1	228151917	228152524	+	0.1	NA	intron (NM_020435, intron 1 of 1)	intron (NM_020435, intron 1 of 1)	2290	NM_020435	57165	Hs.100072	NM_020435	ENSG00000198835	GJC2	CX46.6|Cx47|GJA12|HLD2|LMPH1C|LMPHM3|PMLDAR|SPG44	gap junction protein gamma 2	protein-coding
26.0667-6	chrX	72077828	72078403	+	0.1	NA	intron (NM_001013627, intron 1 of 7)	MIR|SINE|MIR	33706	NR_002309	441502	Hs.449523	NR_002309		RPS26P11	RPS26L1|RPS26_22_1784|bA366E13.1	ribosomal protein S26 pseudogene 11	pseudo
44-3	chr18	45449074	45449911	+	0.1	NA	non-coding (NR_110899, exon 7 of 8)	non-coding (NR_110899, exon 7 of 8)	57544	NR_110899	101927980	Hs.591058	NR_110899		SLC14A2-AS1	-	SLC14A2 antisense RNA 1	ncRNA
30.4333	chr14	59524577	59524989	+	0.1	NA	intron (NM_001164399, intron 16 of 19)	L1ME3A|LINE|L1	40266	NM_016475	51528	Hs.446850	NM_016475	ENSG00000050130	JKAMP	C14orf100|C24orf100|CDA06|HSPC213|HSPC327|JAMP	JNK1/MAPK8 associated membrane protein	protein-coding
11.6-9	chr5	30683688	30683947	+	0.1	NA	Intergenic	L1MA9|LINE|L1	-509869	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
21.0667-7	chr22	46014885	46015209	+	0.1	NA	Intergenic	Intergenic	8431	NR_027240	730668	Hs.640071	NR_027240	ENSG00000280424	LOC730668	-	dynein heavy chain -like pseudogene	pseudo
35.2667	chr17	73549593	73550176	+	0.1	NA	intron (NM_001144952, intron 1 of 44)	intron (NM_001144952, intron 1 of 44)	36201	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA
15.8667-7	chr5	95733466	95733707	+	0.1	NA	intron (NM_014899, intron 2 of 11)	intron (NM_014899, intron 2 of 11)	-1484	NM_001349303	83890	Hs.50499	NM_031952	ENSG00000145757	SPATA9	NYD-SP16	spermatogenesis associated 9	protein-coding
26.4667-11	chr8	71892530	71893005	+	0.1	NA	intron (NR_033651, intron 1 of 2)	THE1A|LTR|ERVL-MaLR	-48271	NM_005098	9242	Hs.442619	NM_005098	ENSG00000178860	MSC	ABF-1|ABF1|MYOR|bHLHa22	musculin	protein-coding
23.2-7	chr15	35706115	35706547	+	0.1	NA	intron (NR_038251, intron 1 of 2)	intron (NR_038251, intron 1 of 2)	160136	NR_038251	100507466	Hs.536420	NR_038251	ENSG00000248079	DPH6-DT	ATPBD4-AS1|DPH6-AS1	DPH6 divergent transcript	ncRNA
29.4667-8	chr6	52582079	52582612	+	0.1	NA	intron (NR_103447, intron 3 of 3)	intron (NR_103447, intron 3 of 3)	5047	NR_103447	401264	Hs.544586	NR_103446	ENSG00000225791	TRAM2-AS1	-	TRAM2 antisense RNA 1 (head to head)	ncRNA
31.1-4	chr10	54526058	54526511	+	0.1	NA	intron (NR_134503, intron 1 of 5)	intron (NR_134503, intron 1 of 5)	40054	NR_134503	105378311	Hs.623892	NR_134503	ENSG00000234173	LOC105378311	-	uncharacterized LOC105378311	ncRNA
23.1-2	chr10	95070967	95071263	+	0.1	NA	Intergenic	MIRc|SINE|MIR	-1618	NM_001198854	1558	Hs.709188	NM_000770	ENSG00000138115	CYP2C8	CPC8|CYP2C8DM|CYPIIC8|MP-12/MP-20	cytochrome P450 family 2 subfamily C member 8	protein-coding
22.7667-3	chr10	71790348	71790840	+	0.1	NA	promoter-TSS (NR_106974)	promoter-TSS (NR_106974)	-153	NR_106974	102465689		NR_106974	ENSG00000274824	MIR7152	hsa-mir-7152	microRNA 7152	ncRNA
15.4-24	chr8	119260537	119260852	+	0.1	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-13837	NR_149112	105375726	Hs.666095	NR_149111		MAL2-AS1	-	MAL2 antisense RNA 1	ncRNA
29.5-6	chr2	79006465	79006861	+	0.1	NA	Intergenic	LTR102_Mam|LTR|ERVL	-19039	NM_001270040	130120	Hs.447084	NM_198448	ENSG00000143954	REG3G	LPPM429|PAP IB|PAP-1B|PAP1B|PAPIB|REG III|REG-III|UNQ429	regenerating family member 3 gamma	protein-coding
31.2	chr1	38895445	38895777	+	0.1	NA	intron (NM_001304746, intron 5 of 7)	AluJb|SINE|Alu	-13985	NR_037636	100527950	Hs.591506	NR_037633		GJA9-MYCBP	Cx58|Cx59|GJA10|GJA9	GJA9-MYCBP readthrough	ncRNA
38.7	chr10	111205293	111205751	+	0.1	NA	Intergenic	MIRb|SINE|MIR	91231	NR_159949	113633881		NR_159949		HEAT2	lnc-ADRA2A-1:1	HEart disease Associated Transcript 2	ncRNA
31.7667-2	chr12	30789626	30790041	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-5848	NR_040245	100287314	Hs.355210	NR_040245		LINC00941	lncRNA-MUF	long intergenic non-protein coding RNA 941	ncRNA
29.9333-12	chr5	135054556	135054981	+	0.1	NA	intron (NR_161235, intron 2 of 5)	intron (NR_161235, intron 2 of 5)	-14721	NR_105050	101927953	Hs.436898	NR_105049	ENSG00000249082	C5orf66-AS1	Epist	C5orf66 antisense RNA 1	ncRNA
32.5667-5	chr3	42492731	42493295	+	0.1	NA	intron (NM_001251882, intron 1 of 13)	MamGypLTR1d|LTR|Gypsy	3714	NM_001251882	7433	Hs.348500	NM_004624	ENSG00000114812	VIPR1	HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R	vasoactive intestinal peptide receptor 1	protein-coding
32.4-10	chr3	153614885	153615397	+	0.1	NA	intron (NR_146713, intron 3 of 6)	intron (NR_146713, intron 3 of 6)	130646	NR_160966	152118	Hs.58586	NR_160966		C3orf79	-	chromosome 3 open reading frame 79	ncRNA
24.4-2	chr1	179058917	179059325	+	0.1	NA	intron (NM_001324310, intron 4 of 7)	intron (NM_001324310, intron 4 of 7)	-22949	NM_022371	64222	Hs.584957	NM_022371	ENSG00000186283	TOR3A	ADIR|ADIR2	torsin family 3 member A	protein-coding
35.9667-3	chr2	196678708	196679274	+	0.1	NA	intron (NM_001080539, intron 13 of 27)	intron (NM_001080539, intron 13 of 27)	34021	NR_034036	100130452	Hs.591625	NR_034036		LOC100130452	-	uncharacterized LOC100130452	ncRNA
23.7333-12	chrX	47022287	47022667	+	0.1	NA	intron (NM_001077445, intron 4 of 10)	intron (NM_001077445, intron 4 of 10)	-55878	NM_001282849	9104	Hs.77854	NM_004683	ENSG00000130988	RGN	GNL|HEL-S-41|RC|SMP30	regucalcin	protein-coding
18.1333	chr1	104949856	104950037	+	0.1	NA	Intergenic	Intergenic	668989	NR_125954	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
36.1	chr10	119177060	119177540	+	0.1	NA	intron (NM_006793, intron 1 of 6)	intron (NM_006793, intron 1 of 6)	1512	NR_126103	10935	Hs.523302	NM_006793	ENSG00000165672	PRDX3	AOP-1|AOP1|HBC189|MER5|PRO1748|SP-22|prx-III	peroxiredoxin 3	protein-coding
13.5-7	chr2	217569312	217569460	+	0.1	NA	intron (NR_026597, intron 2 of 12)	intron (NR_026597, intron 2 of 12)	187207	NR_026597	729582	Hs.572788	NR_026597		DIRC3	-	disrupted in renal carcinoma 3	ncRNA
25.8-12	chr18	34317789	34318257	+	0.1	NA	Intergenic	Intergenic	-94472	NM_001353232	8715	Hs.514795	NM_003787	ENSG00000101746	NOL4	CT125|HRIHFB2255|NOLP	nucleolar protein 4	protein-coding
19.3667-9	chr8	84823387	84823707	+	0.1	NA	intron (NM_001287244, intron 3 of 7)	intron (NM_001287244, intron 3 of 7)	117620	NM_001287244	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
25.2-2	chr10	95963772	95964091	+	0.1	NA	intron (NM_001349008, intron 12 of 34)	intron (NM_001349008, intron 12 of 34)	-36160	NM_001001732	387707	Hs.652240	NM_001001732	ENSG00000188649	CC2D2B	C10orf130|C10orf131	coiled-coil and C2 domain containing 2B	protein-coding
23.7333-9	chr8	87450039	87450422	+	0.1	NA	Intergenic	L1MA4|LINE|L1	423785	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
35.5333-10	chr4	41705694	41706202	+	0.1	NA	Intergenic	L1PA8|LINE|L1	43022	NM_003924	8929	Hs.87202	NM_003924	ENSG00000109132	PHOX2B	CCHS|NBLST2|NBPhox|PMX2B	paired like homeobox 2B	protein-coding
21.9-15	chr8	103111111	103111489	+	0.1	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-9732	NR_145429	379034	Hs.591862	NR_145429		LINC01181	-	long intergenic non-protein coding RNA 1181	ncRNA
6.86667-2	chr16	17637837	17637905	+	0.1	NA	Intergenic	Intergenic	-166911	NM_022166	64131	Hs.22907	NM_022166	ENSG00000103489	XYLT1	DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I	xylosyltransferase 1	protein-coding
19.9-9	chr21	18669999	18670238	+	0.1	NA	intron (NR_109925, intron 2 of 3)	LTR31|LTR|ERV1	16046	NR_036166	100422920		NR_036166	ENSG00000265841	MIR548X	-	microRNA 548x	ncRNA
24.5333-5	chr16	22697503	22697925	+	0.1	NA	Intergenic	AluSz6|SINE|Alu	-116448	NM_006043	9956	Hs.115830	NM_006043	ENSG00000122254	HS3ST2	30ST2|3OST2	heparan sulfate-glucosamine 3-sulfotransferase 2	protein-coding
15.4667-13	chr4	58368651	58368805	+	0.1	NA	Intergenic	Intergenic	167600	NR_133943	105377671	Hs.225045	NR_133943	ENSG00000250340	LINC02494	-	long intergenic non-protein coding RNA 2494	ncRNA
24.6667-8	chr3	109059161	109059664	+	0.1	NA	intron (NM_014429, intron 12 of 27)	intron (NM_014429, intron 12 of 27)	-42044	NR_144461	100506506	Hs.278908	NR_144461	ENSG00000239314	MORC1-AS1	-	MORC1 antisense RNA 1	ncRNA
19.8333-5	chr12	31985107	31985567	+	0.1	NA	exon (NM_018169, exon 4 of 6)	exon (NM_018169, exon 4 of 6)	25922	NM_018169	55196	Hs.445129	NM_018169	ENSG00000174718	RESF1	C12orf35|GET|KIAA1551|UTA2-1	retroelement silencing factor 1	protein-coding
24.4333-6	chr7	33836696	33837054	+	0.1	NA	Intergenic	Intergenic	-68040	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
24.5-16	chr9	102462309	102462615	+	0.1	NA	Intergenic	L1PB1|LINE|L1	-57175	NR_103830	414319	Hs.385790	NR_103830	ENSG00000204250	LINC00587	C9orf107|bA785H23.1	long intergenic non-protein coding RNA 587	ncRNA
30.9333-7	chr6	141630021	141630330	+	0.1	NA	Intergenic	L1MB1|LINE|L1	458624	NM_002511	4829	Hs.552106	NM_002511	ENSG00000135577	NMBR	BB1|BB1R|NMB-R	neuromedin B receptor	protein-coding
32-8	chr6	53855597	53856057	+	0.1	NA	intron (NM_018214, intron 2 of 13)	intron (NM_018214, intron 2 of 13)	60822	NM_018214	55227	Hs.606493	NM_018214	ENSG00000137269	LRRC1	LANO|dJ523E19.1	leucine rich repeat containing 1	protein-coding
20.3-7	chr2	11570911	11571378	+	0.1	NA	intron (NM_014668, intron 4 of 32)	intron (NM_014668, intron 4 of 32)	28458	NM_033090	9687	Hs.467733	NM_014668	ENSG00000196208	GREB1	-	growth regulating estrogen receptor binding 1	protein-coding
29.4-4	chr18	23163906	23164478	+	0.1	NA	intron (NM_138375, intron 1 of 9)	intron (NM_138375, intron 1 of 9)	8367	NM_138375	91768	Hs.11108	NM_138375	ENSG00000134508	CABLES1	CABL1|CABLES|HsT2563|IK3-1	Cdk5 and Abl enzyme substrate 1	protein-coding
33.2333-7	chr22	49223982	49224354	+	0.1	NA	Intergenic	L1MB2|LINE|L1	319298	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA
18.6333-7	chr14	72659417	72659649	+	0.1	NA	intron (NM_001280542, intron 8 of 10)	intron (NM_001280542, intron 8 of 10)	142713	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA
13.4-6	chr2	201740503	201740678	+	0.1	NA	intron (NM_020919, intron 11 of 33)	intron (NM_020919, intron 11 of 33)	40343	NM_001135745	57679	Hs.471096	NM_020919	ENSG00000003393	ALS2	ALS2CR6|ALSJ|IAHSP|PLSJ	alsin Rho guanine nucleotide exchange factor ALS2	protein-coding
18.9-3	chr1	182760036	182760249	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-29307	NM_001200052	80896	Hs.496969	NM_030769	ENSG00000135838	NPL	C112|C1orf13|NAL|NPL1	N-acetylneuraminate pyruvate lyase	protein-coding
24.0333-11	chr22	30652938	30653278	+	0.1	NA	intron (NM_001304795, intron 2 of 2)	L2b|LINE|L2	14767	NM_001304795	150290	Hs.517544	NM_152511	ENSG00000167065	DUSP18	DSP18|DUSP20|LMWDSP20	dual specificity phosphatase 18	protein-coding
29-12	chr6	118715968	118716507	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-6162	NM_001178035	387119	Hs.656959	NM_206921	ENSG00000111860	CEP85L	C6orf204|NY-BR-15|bA57K17.2	centrosomal protein 85 like	protein-coding
43.2-7	chr5	134278994	134279796	+	0.1	NA	Intergenic	L1MEg|LINE|L1	-53322	NM_002715	5515	Hs.105818	NM_002715	ENSG00000113575	PPP2CA	NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C	protein phosphatase 2 catalytic subunit alpha	protein-coding
32.2-4	chr2	128684208	128684850	+	0.1	NA	Intergenic	Intergenic	-180071	NR_110278	101927881	Hs.570247	NR_110278		LOC101927881	-	uncharacterized LOC101927881	ncRNA
28.0667-4	chr16	75414081	75414446	+	0.1	NA	intron (NM_006324, intron 2 of 6)	L1ME4b|LINE|L1	19240	NM_006324	10428	Hs.461361	NM_006324	ENSG00000153774	CFDP1	BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97	craniofacial development protein 1	protein-coding
44.8667	chr3	95106365	95106851	+	0.1	NA	Intergenic	AluSx|SINE|Alu	168345	NR_015400	255025	Hs.130994	NR_015400	ENSG00000239589	LINC00879	-	long intergenic non-protein coding RNA 879	ncRNA
17.0667-9	chr20	48351618	48351921	+	0.1	NA	Intergenic	Intergenic	-8142	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA
7.56667-3	chr2	143872732	143872832	+	0.1	NA	Intergenic	L1ME3D|LINE|L1	-64285	NR_110237	101928386	Hs.668251	NR_110237	ENSG00000232377	LOC101928386	-	uncharacterized LOC101928386	ncRNA
14.5-3	chr13	67181773	67181919	+	0.1	NA	intron (NM_001318372, intron 2 of 4)	L2|LINE|L2	48490	NM_203487	5101	Hs.654709	NM_020403	ENSG00000184226	PCDH9	-	protocadherin 9	protein-coding
36.6-8	chr5	56568135	56568846	+	0.1	NA	intron (NR_161255, intron 1 of 5)	intron (NR_161255, intron 1 of 5)	37766	NR_161255	101928448	Hs.208052	NM_001287053	ENSG00000225940	C5orf67	-	chromosome 5 open reading frame 67	ncRNA
14.8667-6	chr14	60606729	60606974	+	0.1	NA	Intergenic	Tigger3|DNA|TcMar-Tigger	-32365	NR_126480	104548971		NR_126480		SALRNA1	SAL-RNA1|XLOC_023166	senescence associated long non-coding RNA 1	ncRNA
25.2-15	chr3	158702362	158702847	+	0.1	NA	intron (NM_206963, intron 4 of 5)	intron (NM_206963, intron 4 of 5)	29853	NM_206963	5918	Hs.131269	NM_002888	ENSG00000118849	RARRES1	LXNL|PERG-1|TIG1	retinoic acid receptor responder 1	protein-coding
50.3333	chr5	6629935	6630842	+	0.1	NA	intron (NM_001193455, intron 2 of 17)	AluSx|SINE|Alu	2656	NM_001193455	54888	Hs.481526	NM_017755	ENSG00000037474	NSUN2	MISU|MRT5|SAKI|TRM4	NOP2/Sun RNA methyltransferase 2	protein-coding
14.3333-8	chr4	168219182	168219327	+	0.1	NA	intron (NM_017631, intron 37 of 37)	AluSx|SINE|Alu	99498	NM_017631	55601	Hs.591710	NM_017631	ENSG00000137628	DDX60	-	DExD/H-box helicase 60	protein-coding
16.4667-8	chr5	90728658	90729019	+	0.1	NA	exon (NM_032119, exon 49 of 90)	exon (NM_032119, exon 49 of 90)	170041	NR_003149	84059	Hs.591777	NM_032119	ENSG00000164199	ADGRV1	FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b	adhesion G protein-coupled receptor V1	protein-coding
19.8333-12	chr5	5373132	5373519	+	0.1	NA	Intergenic	MER50|LTR|ERV1	-49352	NM_015325	23379	Hs.449296	NM_015325	ENSG00000164151	ICE1	KIAA0947	interactor of little elongation complex ELL subunit 1	protein-coding
17.2667-16	chr3	74096406	74096694	+	0.1	NA	Intergenic	Intergenic	287306	NR_146637	105377165		NR_146637		LINC02005	-	long intergenic non-protein coding RNA 2005	ncRNA
21.7-17	chr6	151482577	151482871	+	0.1	NA	Intergenic	Intergenic	-11293	NM_025059	80129	Hs.660044	NM_025059	ENSG00000120262	CCDC170	C6orf97|bA282P11.1	coiled-coil domain containing 170	protein-coding
26.5667-3	chr13	95730850	95731231	+	0.1	NA	intron (NM_006260, intron 4 of 11)	L1PA2|LINE|L1	53901	NM_006260	5611	Hs.59214	NM_006260	ENSG00000102580	DNAJC3	ACPHD|ERdj6|HP58|P58|P58IPK|PRKRI	DnaJ heat shock protein family (Hsp40) member C3	protein-coding
16.1667	chr1	13709737	13710105	+	0.1	NA	intron (NM_012231, intron 1 of 9)	intron (NM_012231, intron 1 of 9)	5066	NM_012231	7799	Hs.371823	NM_012231	ENSG00000116731	PRDM2	HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2	PR/SET domain 2	protein-coding
25.4667-5	chr20	55985516	55985824	+	0.1	NA	Intergenic	L1MC4|LINE|L1	19849	NM_080617	140689	Hs.126141	NM_080617	ENSG00000054803	CBLN4	CBLNL1	cerebellin 4 precursor	protein-coding
28.9333-9	chr4	46785982	46786356	+	0.1	NA	intron (NM_130902, intron 2 of 2)	intron (NM_130902, intron 2 of 2)	123076	NM_130902	170712	Hs.479656	NM_130902	ENSG00000170516	COX7B2	-	cytochrome c oxidase subunit 7B2	protein-coding
27.6667-3	chr10	94642832	94643189	+	0.1	NA	Intergenic	L1ME3B|LINE|L1	-40719	NM_001128925	1562	Hs.511872	NM_000772	ENSG00000108242	CYP2C18	CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17	cytochrome P450 family 2 subfamily C member 18	protein-coding
19.1333-11	chr6	64515691	64516040	+	0.1	NA	intron (NM_001292009, intron 26 of 43)	intron (NM_001292009, intron 26 of 43)	709029	NR_157848	112935969		NR_157848		SCAT8	EYS-AS1	S-phase cancer associated transcript 8	ncRNA
38.3-4	chr3	89995042	89995755	+	0.1	NA	Intergenic	Intergenic	887777	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
23.4333-11	chr5	42638498	42639104	+	0.1	NA	intron (NM_001242403, intron 3 of 9)	intron (NM_001242403, intron 3 of 9)	72937	NM_001242460	2690	Hs.125180	NM_000163	ENSG00000112964	GHR	GHBP|GHIP	growth hormone receptor	protein-coding
30.2333-4	chr11	104895322	104895730	+	0.1	NA	intron (NR_034071, intron 2 of 7)	intron (NR_034071, intron 2 of 7)	3144	NR_034067	100506742	Hs.476989	NM_001191016	ENSG00000204403	CASP12	CASP-12|CASP12P1	caspase 12 (gene/pseudogene)	protein-coding
14.4333-2	chr13	22998978	22999307	+	0.1	NA	Intergenic	AluSx3|SINE|Alu	-82773	NR_138043	100996930	Hs.380803	NR_138043		LINC00621	-	long intergenic non-protein coding RNA 621	ncRNA
6.33333-3	chrX	56928986	56929099	+	0.1	NA	Intergenic	L1M3|LINE|L1	66499	NM_001010862	169981	Hs.522672	NM_001010862	ENSG00000204271	SPIN3	SPIN-3|TDRD27|bA445O16.1	spindlin family member 3	protein-coding
32.3-3	chr20	57722250	57722680	+	0.1	NA	Intergenic	L1ME3|LINE|L1	-10929	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	prostate transmembrane protein, androgen induced 1	protein-coding
13.5333-19	chr8	87002569	87002725	+	0.1	NA	intron (NM_173538, intron 4 of 10)	L2a|LINE|L2	136232	NM_173538	168975	Hs.246284	NM_173538	ENSG00000176571	CNBD1	-	cyclic nucleotide binding domain containing 1	protein-coding
26.9333-14	chr22	28888589	28889062	+	0.1	NA	intron (NM_001206998, intron 1 of 8)	MIRb|SINE|MIR	5253	NM_001206998	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding
30.4-4	chr2	35047053	35047437	+	0.1	NA	Intergenic	Intergenic	369688	NR_126404	104355288	Hs.624529	NR_126404	ENSG00000228262	LINC01320	-	long intergenic non-protein coding RNA 1320	ncRNA
6.43333	chr3	65707791	65707860	+	0.1	NA	intron (NM_001365904, intron 1 of 24)	intron (NM_001365904, intron 1 of 24)	-185991	NR_046575	100873983	Hs.663889	NR_046575	ENSG00000240175	MAGI1-AS1	-	MAGI1 antisense RNA 1	ncRNA
28.5-7	chr20	57610985	57611417	+	0.1	NA	intron (NR_136660, intron 5 of 7)	intron (NR_136660, intron 5 of 7)	9225	NM_030776	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding
24.1333-8	chr19	18097091	18097509	+	0.1	NA	promoter-TSS (NM_015016)	promoter-TSS (NM_015016)	-478	NM_015016	23031	Hs.466184	NM_015016	ENSG00000099308	MAST3	-	microtubule associated serine/threonine kinase 3	protein-coding
9.7-3	chr5	180537475	180537609	+	0.1	NA	intron (NR_163438, intron 2 of 10)	L1MC1|LINE|L1	-4112	NM_001370474	57472	Hs.608380	NM_015455	ENSG00000113300	CNOT6	CCR4|Ccr4a	CCR4-NOT transcription complex subunit 6	protein-coding
24.3-7	chr20	14671802	14672232	+	0.1	NA	intron (NM_001351663, intron 4 of 17)	intron (NM_001351663, intron 4 of 17)	117633	NR_104193	140848	Hs.570367	NR_104193	ENSG00000227927	MACROD2-IT1	C20orf68|NCRNA00227|bA467D7.4	MACROD2 intronic transcript 1	ncRNA
32.4333-5	chrX	25100968	25101555	+	0.1	NA	Intergenic	Intergenic	-85296	NM_139058	170302	Hs.300304	NM_139058	ENSG00000004848	ARX	CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS	aristaless related homeobox	protein-coding
18.0667-4	chr14	51337492	51337675	+	0.1	NA	intron (NR_038358, intron 1 of 4)	intron (NR_038358, intron 1 of 4)	4190	NR_038358	283553	Hs.325752	NR_038358	ENSG00000258479	LINC00640	-	long intergenic non-protein coding RNA 640	ncRNA
29.0667	chr22	17518053	17518588	+	0.1	NA	intron (NM_001290046, intron 8 of 18)	intron (NM_001290046, intron 8 of 18)	-45119	NM_001303484	83733	Hs.282982	NM_031481	ENSG00000182902	SLC25A18	GC2	solute carrier family 25 member 18	protein-coding
20.6333-10	chr20	50174565	50175009	+	0.1	NA	intron (NR_109943, intron 2 of 2)	AluJo|SINE|Alu	2217	NR_109943	101927541	Hs.570391	NR_109943	ENSG00000231742	LINC01273	-	long intergenic non-protein coding RNA 1273	ncRNA
24.9333-7	chr8	142448356	142448838	+	0.1	NA	Intergenic	Intergenic	-1052	NM_001702	575	Hs.194654	NM_001702	ENSG00000181790	ADGRB1	BAI1|GDAIF	adhesion G protein-coupled receptor B1	protein-coding
28.2-5	chr12	33020528	33020993	+	0.1	NA	Intergenic	Intergenic	-123914	NM_004572	5318	Hs.164384	NM_004572	ENSG00000057294	PKP2	ARVD9	plakophilin 2	protein-coding
19.7667-8	chr3	137100741	137101067	+	0.1	NA	Intergenic	Intergenic	142921	NM_144717	53833	Hs.61232	NM_144717	ENSG00000174564	IL20RB	DIRS1|FNDC6|IL-20R2	interleukin 20 receptor subunit beta	protein-coding
9.76666	chr3	82231065	82231267	+	0.1	NA	intron (NR_147146, intron 3 of 8)	intron (NR_147146, intron 3 of 8)	245024	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
27.4667-13	chrX	74408062	74408436	+	0.1	NA	Intergenic	Intergenic	-13244	NM_006517	6567	Hs.75317	NM_006517	ENSG00000147100	SLC16A2	AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT	solute carrier family 16 member 2	protein-coding
17.3667-11	chr5	37671392	37671666	+	0.1	NA	intron (NM_001345998, intron 10 of 17)	MIRc|SINE|MIR	163293	NM_001278098	2668	Hs.248114	NM_000514	ENSG00000168621	GDNF	ATF|ATF1|ATF2|HFB1-GDNF|HSCR3	glial cell derived neurotrophic factor	protein-coding
32.4-9	chr3	122015246	122015779	+	0.1	NA	intron (NM_001199799, intron 1 of 7)	THE1C|LTR|ERVL-MaLR	6735	NM_001199800	286676	Hs.98484	NM_175924	ENSG00000145103	ILDR1	DFNB42|ILDR1alpha|ILDR1alpha'|ILDR1beta	immunoglobulin like domain containing receptor 1	protein-coding
23.8-7	chr2	161693756	161694136	+	0.1	NA	intron (NM_001354451, intron 1 of 25)	L1MA9|LINE|L1	69530	NM_001354449	57282	Hs.333958	NM_022058	ENSG00000144290	SLC4A10	NBCn2|NCBE	solute carrier family 4 member 10	protein-coding
23.0667-10	chr2	121602063	121602577	+	0.1	NA	intron (NM_015282, intron 2 of 38)	L1MA5A|LINE|L1	47142	NM_015282	23332	Hs.469840	NM_015282	ENSG00000074054	CLASP1	MAST1	cytoplasmic linker associated protein 1	protein-coding
29.4333-10	chr8	106192896	106193265	+	0.1	NA	Intergenic	Intergenic	-77098	NM_001198533	55074	Hs.127286	NM_018002	ENSG00000164830	OXR1	Nbla00307|TLDC3	oxidation resistance 1	protein-coding
38.6-3	chr16	86649148	86649804	+	0.1	NA	Intergenic	Intergenic	70967	NM_005250	2300	Hs.533830	NM_005250	ENSG00000176678	FOXL1	FKH6|FKHL11|FREAC7	forkhead box L1	protein-coding
39.3-6	chr4	55352520	55352988	+	0.1	NA	intron (NM_024592, intron 1 of 4)	L2a|LINE|L2	6512	NM_024592	79644	Hs.39311	NM_024592	ENSG00000128039	SRD5A3	CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1	steroid 5 alpha-reductase 3	protein-coding
21.3333-11	chr8	95328326	95328641	+	0.1	NA	intron (NR_038208, intron 2 of 3)	intron (NR_038208, intron 2 of 3)	-59282	NM_001363260	157657	Hs.548157	NM_177965	ENSG00000156172	C8orf37	BBS21|CORD16|RP64|smalltalk	chromosome 8 open reading frame 37	protein-coding
35.5333-9	chr3	168369526	168370171	+	0.1	NA	intron (NR_021485, intron 3 of 15)	AluSx3|SINE|Alu	120326	NR_021485	93556	Hs.478158	NR_021485		EGFEM1P	C3orf50|NCRNA00259	EGF like and EMI domain containing 1, pseudogene	pseudo
14.7	chr1	165983395	165983584	+	0.1	NA	Intergenic	MSTD|LTR|ERVL-MaLR	75568	NR_037431	100500832		NR_037431	ENSG00000283936	MIR3658	-	microRNA 3658	ncRNA
37.8667-3	chr2	41771144	41771871	+	0.1	NA	Intergenic	L1PA5|LINE|L1	-106048	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA
12.9-10	chr9	4931953	4932247	+	0.1	NA	Intergenic	L1MB4|LINE|L1	-52986	NM_001322195	3717	Hs.656213	NM_004972	ENSG00000096968	JAK2	JTK10|THCYT3	Janus kinase 2	protein-coding
31.5-14	chr8	104997828	104998326	+	0.1	NA	Intergenic	Intergenic	-320361	NM_012082	23414	Hs.431009	NM_012082	ENSG00000169946	ZFPM2	DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2	zinc finger protein, FOG family member 2	protein-coding
30.0667-4	chr11	93738989	93739568	+	0.1	NA	exon (NM_024116, exon 2 of 6)	exon (NM_024116, exon 2 of 6)	2217	NM_024116	79101	Hs.355750	NM_024116	ENSG00000166012	TAF1D	JOSD3|RAFI41|TAF(I)41|TAFI41	TATA-box binding protein associated factor, RNA polymerase I subunit D	protein-coding
21.8667-5	chr18	1617977	1618343	+	0.1	NA	Intergenic	Intergenic	-258531	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
16.1667-4	chr12	33124903	33125129	+	0.1	NA	Intergenic	Intergenic	-228170	NM_004572	5318	Hs.164384	NM_004572	ENSG00000057294	PKP2	ARVD9	plakophilin 2	protein-coding
29.7333-3	chr10	34638368	34639060	+	0.1	NA	intron (NM_001184789, intron 2 of 22)	intron (NM_001184789, intron 2 of 22)	176582	NM_001184794	56288	Hs.131489	NM_019619	ENSG00000148498	PARD3	ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2	par-3 family cell polarity regulator	protein-coding
25.3-2	chr1	178210865	178211429	+	0.1	NA	intron (NM_170692, intron 1 of 17)	L1MEd|LINE|L1	117043	NM_170692	9462	Hs.496139	NM_004841	ENSG00000075391	RASAL2	NGAP	RAS protein activator like 2	protein-coding
27.5-6	chr8	113122695	113123390	+	0.1	NA	intron (NM_001363185, intron 4 of 66)	LTR37B|LTR|ERV1	254110	NM_198124	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
28.2-9	chr17	79884833	79885174	+	0.1	NA	Intergenic	L1M5|LINE|L1	-34354	NR_110851	101928738	Hs.399280	NR_110851	ENSG00000262188	LINC01978	-	long intergenic non-protein coding RNA 1978	ncRNA
5.76667-4	chr6	155250289	155250346	+	0.1	NA	intron (NM_001010927, intron 7 of 12)	intron (NM_001010927, intron 7 of 12)	-13696	NM_001001346	49861	Hs.567491	NM_001001346	ENSG00000171217	CLDN20	-	claudin 20	protein-coding
47.9667	chr12	15651373	15652132	+	0.1	NA	intron (NM_004447, intron 13 of 20)	intron (NM_004447, intron 13 of 20)	105141	NM_030670	5800	Hs.160871	NM_002848	ENSG00000151490	PTPRO	GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O	protein tyrosine phosphatase receptor type O	protein-coding
17.1333-11	chr17	81830125	81830421	+	0.1	NA	intron (NM_001288798, intron 1 of 6)	intron (NM_001288798, intron 1 of 6)	3018	NM_001288798	348262	Hs.514632	NM_207368	ENSG00000225663	MCRIP1	FAM195B|GRAN2|MCRIP	MAPK regulated corepressor interacting protein 1	protein-coding
20.8333-8	chr17	15175381	15175813	+	0.1	NA	Intergenic	Intergenic	-69410	NR_103559	94151	Hs.98684	NR_103559		CDRT8	-	CMT1A duplicated region transcript 8	ncRNA
37.6333-2	chr2	130742798	130743226	+	0.1	NA	Intergenic	AluJr|SINE|Alu	-12528	NM_152698	205147	Hs.369289	NM_152698	ENSG00000178171	AMER3	FAM123C	APC membrane recruitment protein 3	protein-coding
10.6-6	chrX	69768080	69768223	+	0.1	NA	intron (NM_001005613, intron 2 of 2)	L1ME1|LINE|L1	152038	NM_001005610	1896	Hs.105407	NM_001399	ENSG00000158813	EDA	ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED	ectodysplasin A	protein-coding
14.9-2	chr1	166972357	166972589	+	0.1	NA	intron (NM_199351, intron 1 of 9)	intron (NM_199351, intron 1 of 9)	3067	NM_199351	387597	Hs.444835	NM_199351	ENSG00000143195	ILDR2	C1orf32|dJ782G3.1	immunoglobulin like domain containing receptor 2	protein-coding
30.8333-3	chr22	32089959	32090393	+	0.1	NA	intron (NM_000343, intron 10 of 14)	L1MB7|LINE|L1	31006	NM_001256314	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding
28.9333-13	chr8	52742396	52742806	+	0.1	NA	Intergenic	L1ME1|LINE|L1	-28135	NM_001083617	9821	Hs.196102	NM_014781	ENSG00000023287	RB1CC1	ATG17|CC1|FIP200|PPP1R131	RB1 inducible coiled-coil 1	protein-coding
20.1667-14	chr6	124122656	124123175	+	0.1	NA	intron (NM_001300737, intron 2 of 7)	intron (NM_001300737, intron 2 of 7)	-160090	NM_001300740	154215	Hs.656604	NM_153355	ENSG00000188580	NKAIN2	FAM77B|NKAIP2|TCBA|TCBA1	sodium/potassium transporting ATPase interacting 2	protein-coding
34.3-3	chr2	105632127	105632669	+	0.1	NA	Intergenic	Intergenic	-21839	NR_038891	285000	Hs.737917	NR_038891		LOC285000	-	uncharacterized LOC285000	ncRNA
28.4-7	chr2	171296295	171296750	+	0.1	NA	Intergenic	Intergenic	-65229	NM_001136554	9874	Hs.744917	NM_012290	ENSG00000198586	TLK1	PKU-beta	tousled like kinase 1	protein-coding
19.1333-8	chr5	72850305	72850680	+	0.1	NA	intron (NM_001364293, intron 2 of 24)	intron (NM_001364293, intron 2 of 24)	2353	NM_001364296	3842	Hs.482497	NM_002270	ENSG00000083312	TNPO1	IPO2|KPNB2|MIP|MIP1|TRN	transportin 1	protein-coding
25.8333-6	chr2	122055195	122055633	+	0.1	NA	Intergenic	Intergenic	299763	NM_004622	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding
9.76667-3	chr8	26954490	26954624	+	0.1	NA	Intergenic	Intergenic	-87279	NM_000680	148	Hs.52931	NM_000680	ENSG00000120907	ADRA1A	ADRA1C|ADRA1L1|ALPHA1AAR	adrenoceptor alpha 1A	protein-coding
26.4333-4	chr12	116643424	116643779	+	0.1	NA	Intergenic	MIRc|SINE|MIR	84220	NM_001085481	643246	Hs.356061	NM_001085481	ENSG00000258102	MAP1LC3B2	ATG8G	microtubule associated protein 1 light chain 3 beta 2	protein-coding
24.3667-13	chr8	16237634	16237980	+	0.1	NA	Intergenic	Charlie7|DNA|hAT-Charlie	-45016	NM_138716	4481	Hs.147635	NM_002445	ENSG00000038945	MSR1	CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2	macrophage scavenger receptor 1	protein-coding
18.5-6	chr17	46929514	46929724	+	0.1	NA	intron (NM_001353116, intron 2 of 5)	intron (NM_001353116, intron 2 of 5)	6459	NM_001353116	9570	Hs.463278	NM_004287	ENSG00000108433	GOSR2	Bos1|EPM6|GS27	golgi SNAP receptor complex member 2	protein-coding
9.46667	chr2	27603242	27603425	+	0.1	NA	intron (NM_001271289, intron 8 of 12)	intron (NM_001271289, intron 8 of 12)	20291	NM_032434	84450	Hs.529178	NM_032434	ENSG00000243943	ZNF512	-	zinc finger protein 512	protein-coding
48.0667	chr14	24605272	24605974	+	0.1	NA	TTS (NM_033423)	TTS (NM_033423)	4062	NM_033423	2999	Hs.348264	NM_033423	ENSG00000100450	GZMH	CCP-X|CGL-2|CSP-C|CTLA1|CTSGL2	granzyme H	protein-coding
31.6667-4	chr11	7203506	7204003	+	0.1	NA	Intergenic	Intergenic	-31012	NR_031683	100313774		NR_031683	ENSG00000221703	MIR302E	MIRN302E	microRNA 302e	ncRNA
38.9667-3	chr2	214526705	214527347	+	0.1	NA	intron (NR_047698, intron 2 of 3)	L1PA16|LINE|L1	16844	NR_047698	100885780	Hs.665982	NR_047698	ENSG00000224257	VWC2L-IT1	-	VWC2L intronic transcript 1	ncRNA
17.9667	chr14	85057960	85058407	+	0.1	NA	Intergenic	Intergenic	-213749	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
9.56667-2	chr10	86705605	86705783	+	0.1	NA	intron (NM_001368064, intron 7 of 12)	intron (NM_001368064, intron 7 of 12)	37130	NM_001080116	11155	Hs.657271	NM_007078	ENSG00000122367	LDB3	CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP	LIM domain binding 3	protein-coding
11.5667-4	chr4	46513080	46513206	+	0.1	NA	Intergenic	Intergenic	-123015	NM_000807	2555	Hs.48372	NM_000807	ENSG00000151834	GABRA2	-	gamma-aminobutyric acid type A receptor alpha2 subunit	protein-coding
27.0667-5	chr2	23121461	23121781	+	0.1	NA	Intergenic	Intergenic	-263558	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding
16.5667	chr14	29846542	29846910	+	0.1	NA	intron (NM_001330069, intron 1 of 18)	L2a|LINE|L2	80370	NM_001348390	5587	Hs.508999	NM_002742	ENSG00000184304	PRKD1	CHDED|PKC-MU|PKCM|PKD|PRKCM	protein kinase D1	protein-coding
20.5667-6	chr14	50789292	50789606	+	0.1	NA	intron (NM_016350, intron 5 of 28)	AluSg7|SINE|Alu	-32348	NR_135258	105370489	Hs.569387	NR_135258	ENSG00000258843	LOC105370489	-	uncharacterized LOC105370489	ncRNA
22.2333	chr10	31355295	31355651	+	0.1	NA	intron (NM_001323658, intron 2 of 8)	L2b|LINE|L2	33813	NM_001323677	6935	Hs.124503	NM_030751	ENSG00000148516	ZEB1	AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A	zinc finger E-box binding homeobox 1	protein-coding
27.4-7	chr17	51067651	51068033	+	0.1	NA	intron (NM_001130527, intron 2 of 29)	intron (NM_001130527, intron 2 of 29)	-20964	NM_001251971	9043	Hs.463439	NM_003971	ENSG00000008294	SPAG9	CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6	sperm associated antigen 9	protein-coding
25.9667-3	chr15	100787510	100787894	+	0.1	NA	Intergenic	Intergenic	-62050	NR_160704	105369201	Hs.612155	NR_160702	ENSG00000272808	LOC105369201	-	uncharacterized LOC105369201	ncRNA
21.1667-6	chr13	83667632	83667881	+	0.1	NA	Intergenic	THE1D|LTR|ERVL-MaLR	214637	NM_052910	114798	Hs.415478	NM_052910	ENSG00000178235	SLITRK1	LRRC12|TTM	SLIT and NTRK like family member 1	protein-coding
32.3667-5	chr4	78516250	78516604	+	0.1	NA	intron (NM_025074, intron 66 of 73)	intron (NM_025074, intron 66 of 73)	-35343	NM_005139	306	Hs.480042	NM_005139	ENSG00000138772	ANXA3	ANX3	annexin A3	protein-coding
21.2-20	chr5	154262985	154263361	+	0.1	NA	intron (NM_198321, intron 1 of 11)	L1MB7|LINE|L1	72440	NM_198321	55568	Hs.631797	NM_017540	ENSG00000164574	GALNT10	GALNACT10|PPGALNACT10|PPGANTASE10	polypeptide N-acetylgalactosaminyltransferase 10	protein-coding
21.1667-10	chr6	158220311	158220580	+	0.1	NA	Intergenic	Intergenic	52098	NM_207118	404672	Hs.356224	NM_207118	ENSG00000272047	GTF2H5	C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2	general transcription factor IIH subunit 5	protein-coding
38.7333-4	chr18	48637214	48637601	+	0.1	NA	intron (NM_014772, intron 3 of 11)	intron (NM_014772, intron 3 of 11)	-33193	NR_039897	100616366		NR_039897	ENSG00000266276	MIR4743	-	microRNA 4743	ncRNA
19.5333-7	chr22	48756623	48756930	+	0.1	NA	Intergenic	MER31B|LTR|ERV1	-23519	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA
26.2667-10	chrX	155058839	155059223	+	0.1	NA	3' UTR (NM_023934, exon 5 of 5)	3' UTR (NM_023934, exon 5 of 5)	12105	NM_001018024	100272147	Hs.6917	NM_001018024	ENSG00000182712	CMC4	C6.1B|MTCP1|MTCP1B|MTCP1NB|p8|p8MTCP1	C-X9-C motif containing 4	protein-coding
12.0667	chr10	85779274	85779499	+	0.1	NA	intron (NM_017551, intron 8 of 15)	intron (NM_017551, intron 8 of 15)	201655	NR_038986	100507470	Hs.585483	NR_038986	ENSG00000234942	GRID1-AS1	-	GRID1 antisense RNA 1	ncRNA
15.5667-13	chr7	111957186	111957454	+	0.1	NA	intron (NM_001363540, intron 8 of 52)	intron (NM_001363540, intron 8 of 52)	148815	NR_103806	100506413	Hs.677513	NR_103806	ENSG00000225572	DOCK4-AS1	-	DOCK4 antisense RNA 1	ncRNA
19.2	chr1	236754735	236754981	+	0.1	NA	intron (NM_001278344, intron 18 of 22)	intron (NM_001278344, intron 18 of 22)	-40423	NM_000254	4548	Hs.498187	NM_000254	ENSG00000116984	MTR	HMAG|MS|cblG	5-methyltetrahydrofolate-homocysteine methyltransferase	protein-coding
42.8-2	chr19	7353714	7354276	+	0.1	NA	intron (NM_001367823, intron 1 of 28)	intron (NM_001367823, intron 1 of 28)	5058	NM_001367823	23370	Hs.465761	NM_015318	ENSG00000104880	ARHGEF18	P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF	Rho/Rac guanine nucleotide exchange factor 18	protein-coding
21.1-4	chr2	65856015	65856231	+	0.1	NA	Intergenic	L2a|LINE|L2	-423524	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding
40.5-2	chr1	229693852	229694449	+	0.1	NA	Intergenic	Intergenic	67903	NM_014777	9816	Hs.533628	NM_014777	ENSG00000135763	URB2	KIAA0133|NET10|NPA2	URB2 ribosome biogenesis homolog	protein-coding
26.3667-2	chr12	9227878	9228190	+	0.1	NA	TTS (NR_040112)	TTS (NR_040112)	6173	NR_040112	3	Hs.569125	NR_040112	ENSG00000256069	A2MP1	A2MP	alpha-2-macroglobulin pseudogene 1	pseudo
28.6667-4	chr11	28876954	28877368	+	0.1	NA	Intergenic	Intergenic	-399613	NR_107035	102466876		NR_107035	ENSG00000273912	MIR8068	hsa-mir-8068	microRNA 8068	ncRNA
11.3333-10	chr7	42169975	42170108	+	0.1	NA	intron (NM_000168, intron 2 of 14)	AluSx3|SINE|Alu	67168	NM_000168	2737	Hs.21509	NM_000168	ENSG00000106571	GLI3	ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV	GLI family zinc finger 3	protein-coding
47.2-5	chr5	25936579	25937103	+	0.1	NA	Intergenic	MER57F|LTR|ERV1	745888	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
45.4-3	chr21	25052400	25053090	+	0.1	NA	intron (NR_046198, intron 3 of 3)	L1MB1|LINE|L1	212195	NR_046198	339622	Hs.616316	NR_046198	ENSG00000226983	LINC01692	-	long intergenic non-protein coding RNA 1692	ncRNA
37.4667-6	chr7	39694180	39694631	+	0.1	NA	intron (NM_005402, intron 3 of 4)	intron (NM_005402, intron 3 of 4)	-39163	NR_026999	349114	Hs.414183	NM_198284		LINC00265	NCRNA00265	long intergenic non-protein coding RNA 265	ncRNA
16-6	chr5	81557700	81558076	+	0.1	NA	intron (NM_012446, intron 4 of 16)	L1MEc|LINE|L1	-163754	NM_130767	134526	Hs.591756	NM_130767	ENSG00000172497	ACOT12	CACH-1|Cach|STARD15|THEAL	acyl-CoA thioesterase 12	protein-coding
10.5333-3	chr2	21174352	21174457	+	0.1	NA	Intergenic	AluJr4|SINE|Alu	50418	NM_001306137	100129278	Hs.651096	NM_001306137	ENSG00000218819	TDRD15	-	tudor domain containing 15	protein-coding
24-4	chr2	10178278	10178595	+	0.1	NA	intron (NR_161344, intron 3 of 3)	AluSx1|SINE|Alu	14235	NR_036222	100422929		NR_036222	ENSG00000265418	MIR4261	-	microRNA 4261	ncRNA
25.1333-14	chr7	33814215	33814734	+	0.1	NA	Intergenic	Intergenic	-90441	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
19.5	chr10	13173699	13173960	+	0.1	NA	intron (NM_018518, intron 5 of 19)	intron (NM_018518, intron 5 of 19)	12271	NM_018518	55388	Hs.198363	NM_018518	ENSG00000065328	MCM10	CNA43|DNA43|PRO2249	minichromosome maintenance 10 replication initiation factor	protein-coding
18.1667-10	chr5	179767702	179767935	+	0.1	NA	intron (NM_014757, intron 2 of 4).2	intron (NM_014757, intron 2 of 4).2	-26168	NM_145867	4056	Hs.706741	NM_145867	ENSG00000213316	LTC4S	-	leukotriene C4 synthase	protein-coding
29.3-6	chr5	34003183	34003624	+	0.1	NA	intron (NR_037951, intron 7 of 8)	MIR|SINE|MIR	4647	NM_203382	23600	Hs.508343	NM_014324	ENSG00000242110	AMACR	AMACRD|CBAS4|P504S|RACE|RM	alpha-methylacyl-CoA racemase	protein-coding
14.3333-4	chr14	62868258	62868571	+	0.1	NA	intron (NM_139318, intron 7 of 10)	MADE1|DNA|TcMar-Mariner	177044	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
12.8-3	chr5	38422511	38422681	+	0.1	NA	intron (NM_182798, intron 7 of 16)	Charlie4a|DNA|hAT-Charlie	19055	NM_182798	133584	Hs.20103	NM_152403	ENSG00000164318	EGFLAM	AGRINL|AGRNL|PIKA	EGF like, fibronectin type III and laminin G domains	protein-coding
18.6667-8	chr16	75245375	75245603	+	0.1	NA	intron (NM_001170715, intron 1 of 6)	intron (NM_001170715, intron 1 of 6)	2662	NM_001170719	9564	Hs.479747	NM_014567	ENSG00000050820	BCAR1	CAS|CAS1|CASS1|CRKAS|P130Cas	BCAR1 scaffold protein, Cas family member	protein-coding
12.5667	chr10	33594846	33594980	+	0.1	NA	Intergenic	Intergenic	177767	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA
15.6-11	chr6	75327723	75327951	+	0.1	NA	intron (NM_001300866, intron 4 of 6)	L1MC5|LINE|L1	42823	NR_040081	100506804	Hs.743708	NR_040081		LOC100506804	-	uncharacterized LOC100506804	ncRNA
27.8667-10	chr7	41425967	41426329	+	0.1	NA	Intergenic	Intergenic	-267771	NR_027118	285954	Hs.656869	NR_027118	ENSG00000224116	INHBA-AS1	-	INHBA antisense RNA 1	ncRNA
31.6667-8	chr3	177013665	177014296	+	0.1	NA	Intergenic	Intergenic	182498	NM_001321193	79718	Hs.714201	NM_024665	ENSG00000177565	TBL1XR1	C21|DC42|IRA1|MRD41|TBLR1	transducin beta like 1 X-linked receptor 1	protein-coding
57.1667-2	chr6	61215883	61216881	+	0.1	NA	Intergenic	L1MC3|LINE|L1	-357748	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
25.4333-8	chr2	77554517	77554825	+	0.1	NA	Intergenic	Intergenic	-32238	NM_001282924	80059	Hs.285782	NM_024993	ENSG00000176204	LRRTM4	-	leucine rich repeat transmembrane neuronal 4	protein-coding
28.4-14	chr5	127232977	127233492	+	0.1	NA	Intergenic	MamGypLTR1b|LTR|Gypsy	-57530	NM_001308121	84466	Hs.438709	NM_032446	ENSG00000145794	MEGF10	EMARDD	multiple EGF like domains 10	protein-coding
23.2	chr1	165610015	165610438	+	0.1	NA	Intergenic	Intergenic	-21008	NM_004528	4259	Hs.191734	NM_004528	ENSG00000143198	MGST3	GST-III	microsomal glutathione S-transferase 3	protein-coding
40.1333-7	chr5	128962480	128963097	+	0.1	NA	Intergenic	Intergenic	-2339	NM_014031	28965	Hs.49765	NM_014031	ENSG00000113396	SLC27A6	ACSVL2|FACVL2|FATP6|VLCS-H1	solute carrier family 27 member 6	protein-coding
27.1	chr1	88097545	88098020	+	0.1	NA	Intergenic	Intergenic	-586362	NM_001320707	5586	Hs.440833	NM_006256	ENSG00000065243	PKN2	PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7	protein kinase N2	protein-coding
39.1667-4	chr5	42389352	42389763	+	0.1	NA	Intergenic	AluY|SINE|Alu	-33882	NM_000163	2690	Hs.125180	NM_000163	ENSG00000112964	GHR	GHBP|GHIP	growth hormone receptor	protein-coding
37.2-5	chr2	155459353	155459995	+	0.1	NA	Intergenic	Intergenic	760979	NM_002239	3760	Hs.591606	NM_002239	ENSG00000162989	KCNJ3	GIRK1|KGA|KIR3.1	potassium voltage-gated channel subfamily J member 3	protein-coding
15.2-9	chr8	100261176	100261425	+	0.1	NA	intron (NM_001353837, intron 8 of 9)	AluJo|SINE|Alu	40893	NM_001353837	25897	Hs.292882	NM_015435	ENSG00000034677	RNF19A	RNF19	ring finger protein 19A, RBR E3 ubiquitin protein ligase	protein-coding
30.7667	chr10	104187109	104187593	+	0.1	NA	exon (NM_025145, exon 14 of 38)	exon (NM_025145, exon 14 of 38)	31532	NR_030340	693194		NR_030340	ENSG00000208033	MIR609	MIRN609|hsa-mir-609	microRNA 609	ncRNA
21.3667-5	chr15	86551761	86552217	+	0.1	NA	intron (NM_152336, intron 20 of 24)	L1MC1|LINE|L1	-235021	NR_046012	727915	Hs.451281	NR_046012	ENSG00000260125	AGBL1-AS1	-	AGBL1 antisense RNA 1	ncRNA
8.53333	chr10	69063945	69064111	+	0.1	NA	Intergenic	MER5A|DNA|hAT-Charlie	-23575	NM_001321053	5552	Hs.1908	NM_002727	ENSG00000122862	SRGN	PPG|PRG|PRG1	serglycin	protein-coding
30.5333-9	chr7	124255822	124256403	+	0.1	NA	Intergenic	Intergenic	95984	NR_110180	101928211	Hs.131334	NR_110180		LOC101928211	-	uncharacterized LOC101928211	ncRNA
26.4667	chr15	26415265	26415677	+	0.1	NA	Intergenic	L1MA3|LINE|L1	213619	NR_103801	2562	Hs.302352	NM_000814	ENSG00000166206	GABRB3	ECA5|EIEE43	gamma-aminobutyric acid type A receptor beta3 subunit	protein-coding
33.8333-3	chr14	79694432	79694872	+	0.1	NA	intron (NR_073547, intron 17 of 20)	intron (NR_073547, intron 17 of 20)	415272	NM_138970	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
32.0667-8	chrX	41496153	41496696	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	48964	NM_022567	60506	Hs.302019	NM_022567	ENSG00000188937	NYX	CLRP|CSNB1|CSNB1A|CSNB4|NBM1	nyctalopin	protein-coding
24.8333-5	chr6	159534589	159535092	+	0.1	NA	Intergenic	Intergenic	151309	NR_125873	102724053	Hs.98463	NR_125873	ENSG00000234777	LINC02529	-	long intergenic non-protein coding RNA 2529	ncRNA
16.2333-4	chr4	38978191	38978460	+	0.1	NA	intron (NM_024943, intron 5 of 6)	L2c|LINE|L2	54084	NM_001303228	80008	Hs.374147	NM_024943	ENSG00000121895	TMEM156	-	transmembrane protein 156	protein-coding
35.7667-3	chr15	88965429	88965996	+	0.1	NA	Intergenic	L1MA5A|LINE|L1	-52333	NM_001310319	4240	Hs.3745	NM_005928	ENSG00000140545	MFGE8	BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47	milk fat globule-EGF factor 8 protein	protein-coding
17.2667-11	chr19	1023164	1023405	+	0.1	NA	Intergenic	AluJo|SINE|Alu	1762	NR_104084	101954275		NR_104084	ENSG00000201654	RNU6-7	U6-7	RNA, U6 small nuclear 7	snRNA
33.4667-5	chr3	42120273	42120694	+	0.1	NA	intron (NM_001349247, intron 1 of 16)	intron (NM_001349247, intron 1 of 16)	-28752	NM_001265609	22906	Hs.535711	NM_014965	ENSG00000182606	TRAK1	EIEE68|MILT1|OIP106	trafficking kinesin protein 1	protein-coding
40.7667-2	chr22	44385223	44385808	+	0.1	NA	Intergenic	Intergenic	-57812	NR_109966	101927526	Hs.339290	NR_109966	ENSG00000232655	LINC01656	-	long intergenic non-protein coding RNA 1656	ncRNA
37.7333	chr10	111619793	111620327	+	0.1	NA	Intergenic	Intergenic	505769	NR_159949	113633881		NR_159949		HEAT2	lnc-ADRA2A-1:1	HEart disease Associated Transcript 2	ncRNA
3.96667-2	chr11	110236050	110236089	+	0.1	NA	intron (NM_001260493, intron 12 of 15)	intron (NM_001260493, intron 12 of 15)	60643	NM_001260493	5962	Hs.263671	NM_002906	ENSG00000137710	RDX	DFNB24	radixin	protein-coding
15.0333-2	chr1	186764906	186765203	+	0.1	NA	Intergenic	L2b|LINE|L2	-63846	NM_024420	5321	Hs.497200	NM_024420	ENSG00000116711	PLA2G4A	GURDP|PLA2G4|cPLA2|cPLA2-alpha	phospholipase A2 group IVA	protein-coding
23.5333-16	chr7	133624992	133625363	+	0.1	NA	intron (NM_021807, intron 9 of 17)	intron (NM_021807, intron 9 of 17)	199711	NR_120513	101928861	Hs.675747	NR_120513		LOC101928861	-	uncharacterized LOC101928861	ncRNA
31.8667-6	chr3	87536329	87536820	+	0.1	NA	Intergenic	Intergenic	-256132	NM_001322208	3355	Hs.248136	NM_000866	ENSG00000179097	HTR1F	5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77	5-hydroxytryptamine receptor 1F	protein-coding
27.9667-6	chr2	183246193	183246564	+	0.1	NA	Intergenic	Intergenic	121935	NM_138285	129401	Hs.180591	NM_138285	ENSG00000163002	NUP35	MP-44|MP44|NP44|NUP53	nucleoporin 35	protein-coding
36.8333-2	chr11	40028289	40028735	+	0.1	NA	Intergenic	Intergenic	264618	NR_047674	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
23.7-3	chr16	79454490	79454758	+	0.1	NA	Intergenic	Intergenic	146113	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding
7.03333-3	chr5	166843943	166844060	+	0.1	NA	Intergenic	Intergenic	82369	NR_108020	102557615		NR_108020	ENSG00000254130	LINC01947	CTB-7E3.1	long intergenic non-protein coding RNA 1947	ncRNA
14.7667	chr2	174594007	174594315	+	0.1	NA	intron (NM_001077269, intron 1 of 7)	intron (NM_001077269, intron 1 of 7)	-36089	NR_125730	103625684		NR_125730	ENSG00000207357	RNU6-2	U6-2	RNA, U6 small nuclear 2	snRNA
18.4667-10	chr9	97714622	97714872	+	0.1	NA	intron (NR_147055, intron 8 of 10)	intron (NR_147055, intron 8 of 10)	-17338	NR_027302	7507	Hs.654364	NM_000380	ENSG00000136936	XPA	XP1|XPAC	XPA, DNA damage recognition and repair factor	protein-coding
38.4667-2	chr19	49766466	49766894	+	0.1	NA	promoter-TSS (NM_014203)	promoter-TSS (NM_014203)	-321	NM_130787	160	Hs.467125	NM_014203	ENSG00000196961	AP2A1	ADTAA|AP2-ALPHA|CLAPA1	adaptor related protein complex 2 subunit alpha 1	protein-coding
33.3-7	chr8	129051948	129052337	+	0.1	NA	Intergenic	L2c|LINE|L2	-86141	NR_145483	106144608		NR_145483	ENSG00000229140	LINC00976	-	long intergenic non-protein coding RNA 976	ncRNA
14.1667	chr1	88765835	88765981	+	0.1	NA	intron (NM_006256, intron 3 of 21)	AluSx|SINE|Alu	-80704	NR_110682	101927891	Hs.637231	NR_110682	ENSG00000237505	PKN2-AS1	-	PKN2 antisense RNA 1	ncRNA
21.5-11	chrX	51093426	51093736	+	0.1	NA	Intergenic	L2c|LINE|L2	77840	NR_110382	101926971	Hs.657995	NR_110382	ENSG00000230317	LINC01284	-	long intergenic non-protein coding RNA 1284	ncRNA
44.3-2	chr2	204030929	204031456	+	0.1	NA	Intergenic	Intergenic	94444	NM_012092	29851	Hs.56247	NM_012092	ENSG00000163600	ICOS	AILIM|CD278|CVID1	inducible T cell costimulator	protein-coding
23.4333-12	chr6	42601243	42601523	+	0.1	NA	intron (NM_015255, intron 4 of 46)	intron (NM_015255, intron 4 of 46)	37354	NM_001184801	23304	Hs.529925	NM_015255	ENSG00000024048	UBR2	C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3	ubiquitin protein ligase E3 component n-recognin 2	protein-coding
36.6333-2	chr15	53503412	53503848	+	0.1	NA	Intergenic	Intergenic	37222	NR_102336	256764	Hs.122125	NM_182758	ENSG00000166415	WDR72	AI2A3	WD repeat domain 72	protein-coding
15.1333-12	chr5	57304635	57304898	+	0.1	NA	Intergenic	Intergenic	90692	NM_001127236	65056	Hs.444279	NM_022913	ENSG00000062194	GPBP1	GPBP|SSH6|VASCULIN	GC-rich promoter binding protein 1	protein-coding
34.0667-4	chr13	105473743	105474207	+	0.1	NA	intron (NM_172370, intron 3 of 4)	intron (NM_172370, intron 3 of 4)	7759	NM_001161812	267012	Hs.381382	NM_172370	ENSG00000182346	DAOA	LG72|SG72	D-amino acid oxidase activator	protein-coding
13.4333-3	chr17	13388116	13388404	+	0.1	NA	Intergenic	Intergenic	-81500	NR_146885	105371541		NR_146885	ENSG00000234634	LINC02093	-	long intergenic non-protein coding RNA 2093	ncRNA
29.1667-11	chr4	76970950	76971341	+	0.1	NA	intron (NM_018243, intron 1 of 9)	intron (NM_018243, intron 1 of 9)	21393	NM_001306147	55752	Hs.128199	NM_018243	ENSG00000138758	SEPTIN11	SEPT11	septin 11	protein-coding
30.2667-9	chr9	18874101	18874500	+	0.1	NA	intron (NM_001040272, intron 23 of 28)	L1PB1|LINE|L1	158909	NM_153707	158297	Hs.731593	NM_153707	ENSG00000155875	SAXO1	C9orf138|FAM154A	stabilizer of axonemal microtubules 1	protein-coding
28.8667-5	chr7	49237891	49238272	+	0.1	NA	Intergenic	L1PA13|LINE|L1	313534	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
9.16667	chr3	81686896	81687039	+	0.1	NA	intron (NM_000158, intron 2 of 15)	intron (NM_000158, intron 2 of 15)	74678	NM_000158	2632	Hs.436062	NM_000158	ENSG00000114480	GBE1	APBD|GBE|GSD4	1,4-alpha-glucan branching enzyme 1	protein-coding
14.1667-7	chr4	70273570	70273807	+	0.1	NA	Intergenic	Intergenic	31072	NM_005212	1448	Hs.54415	NM_005212	ENSG00000171209	CSN3	CNS10|CSN10|CSNK|KCA	casein kappa	protein-coding
10.3-9	chr8	63213360	63213515	+	0.1	NA	TTS (NM_001277815)	TTS (NM_001277815)	44434	NM_001277814	253943	Hs.491861	NM_152758	ENSG00000185728	YTHDF3	-	YTH N6-methyladenosine RNA binding protein 3	protein-coding
15.2333-8	chr5	30113318	30113470	+	0.1	NA	Intergenic	Intergenic	232834	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
13.8667-3	chr11	88270706	88270969	+	0.1	NA	Intergenic	L1MA3|LINE|L1	66899	NM_148170	1075	Hs.128065	NM_001814	ENSG00000109861	CTSC	CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS	cathepsin C	protein-coding
36.1-8	chrUn_KI270757v1	57490	58119	+	0.1	NA	NA	ALR/Alpha|Satellite|centr	NA	NA								
11.4-3	chr14	28119400	28119600	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-446279	NR_148991	728755	Hs.652058	NR_148991	ENSG00000258932	LOC728755	-	uncharacterized LOC728755	ncRNA
23.8667-4	chr2	28937920	28938432	+	0.1	NA	intron (NM_015131, intron 14 of 17)	intron (NM_015131, intron 14 of 17)	10193	NR_145755	109617012		NR_145755	ENSG00000265706	SNORD53B	-	small nucleolar RNA, C/D box 53B	snoRNA
13.5667-5	chr8	94957805	94958112	+	0.1	NA	intron (NR_148908, intron 2 of 4)	LTR32|LTR|ERVL	8398	NR_148909	137682	Hs.435500	NM_152416	ENSG00000156170	NDUFAF6	C8orf38|MC1DN17	NADH:ubiquinone oxidoreductase complex assembly factor 6	protein-coding
6.66667-3	chr1	116315018	116315129	+	0.1	NA	Intergenic	L1ME3G|LINE|L1	-58171	NM_000701	476	Hs.371889	NM_000701	ENSG00000163399	ATP1A1	CMT2DD|HOMGSMR2	ATPase Na+/K+ transporting subunit alpha 1	protein-coding
15-8	chr3	131234128	131234457	+	0.1	NA	intron (NM_001353043, intron 15 of 17)	intron (NM_001353043, intron 15 of 17)	-127553	NR_002949	152195	Hs.380350	NM_194289	ENSG00000246082	NUDT16P1	NUDT16P	nudix hydrolase 16 pseudogene 1	pseudo
28.1333-2	chr11	13461812	13462140	+	0.1	NA	intron (NM_032320, intron 1 of 8)	intron (NM_032320, intron 1 of 8)	1321	NM_001297741	84280	Hs.332382	NM_032320	ENSG00000148925	BTBD10	GMRP-1|GMRP1	BTB domain containing 10	protein-coding
23.4667-4	chr2	34143881	34144218	+	0.1	NA	intron (NR_126403, intron 4 of 5)	intron (NR_126403, intron 4 of 5)	76823	NR_132381	106144585	Hs.580486	NR_132381	ENSG00000237790	LINC01318	-	long intergenic non-protein coding RNA 1318	ncRNA
46.1333-7	chr5	159151164	159151747	+	0.1	NA	Intergenic	L1PB2|LINE|L1	50972	NR_109890	101927740	Hs.738721	NR_109890	ENSG00000245812	LINC02202	-	long intergenic non-protein coding RNA 2202	ncRNA
16.1667-12	chr3	13745745	13745906	+	0.1	NA	intron (NR_027103, intron 5 of 5)	intron (NR_027103, intron 5 of 5)	95104	NR_027103	285375	Hs.319969	NR_027103	ENSG00000224514	LINC00620	-	long intergenic non-protein coding RNA 620	ncRNA
18.9667-3	chr14	52295835	52296233	+	0.1	NA	Intergenic	Intergenic	-18278	NM_000956	5732	Hs.2090	NM_000956	ENSG00000125384	PTGER2	EP2	prostaglandin E receptor 2	protein-coding
22.9-11	chr3	52158300	52158686	+	0.1	NA	Intergenic	AluSp|SINE|Alu	-4070	NM_001161580	25886	Hs.476306	NM_015426	ENSG00000164087	POC1A	PIX2|SOFT|WDR51A	POC1 centriolar protein A	protein-coding
7.66666	chr13	85404572	85404733	+	0.1	NA	intron (NR_046989, intron 1 of 3)	intron (NR_046989, intron 1 of 3)	41049	NR_046989	100874137	Hs.742643	NR_046989	ENSG00000226317	LINC00351	-	long intergenic non-protein coding RNA 351	ncRNA
15.5-6	chr20	51432936	51433149	+	0.1	NA	intron (NM_012340, intron 8 of 10)	intron (NM_012340, intron 8 of 10)	19935	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA
26.1667-4	chr3	37737479	37737785	+	0.1	NA	intron (NM_002207, intron 20 of 27)	intron (NM_002207, intron 20 of 27)	124148	NR_110532	101928153	Hs.657314	NR_110531	ENSG00000235257	ITGA9-AS1	-	ITGA9 antisense RNA 1	ncRNA
32.2667-5	chr4	175714474	175714934	+	0.1	NA	intron (NM_201592, intron 1 of 6)	intron (NM_201592, intron 1 of 6)	72972	NM_001261448	2823	Hs.75819	NM_005277	ENSG00000150625	GPM6A	GPM6|M6A	glycoprotein M6A	protein-coding
22.7667-15	chr6	129865912	129866344	+	0.1	NA	Intergenic	Intergenic	-4813	NM_001010876	253582		NM_001010876	ENSG00000203756	TMEM244	C6orf191|bA174C7.4	transmembrane protein 244	protein-coding
34.7667-7	chr16	13539462	13540032	+	0.1	NA	Intergenic	L1PA15|LINE|L1	-380410	NM_005236	2072	Hs.567265	NM_005236	ENSG00000175595	ERCC4	ERCC11|FANCQ|RAD1|XFEPS|XPF	ERCC excision repair 4, endonuclease catalytic subunit	protein-coding
22.7333-9	chr7	125867192	125867597	+	0.1	NA	Intergenic	Intergenic	-603103	NR_110182	101928254	Hs.571236	NR_110182	ENSG00000219445	LOC101928254	-	uncharacterized LOC101928254	ncRNA
14.2333	chr1	95758567	95758818	+	0.1	NA	Intergenic	MIRc|SINE|MIR	-233376	NR_125991	102723661	Hs.143911	NR_125991	ENSG00000237435	LINC02790	-	long intergenic non-protein coding RNA 2790	ncRNA
25.4333-6	chr16	70586043	70586379	+	0.1	NA	intron (NM_152456, intron 1 of 6)	L1MB2|LINE|L1	6312	NM_001172771	146433	Hs.461214	NM_152456	ENSG00000157368	IL34	C16orf77|IL-34	interleukin 34	protein-coding
10.9-5	chr5	15082921	15083052	+	0.1	NA	Intergenic	Intergenic	183574	NR_109944	101929454	Hs.453273	NR_109944		LINC02149	-	long intergenic non-protein coding RNA 2149	ncRNA
27.5333-6	chr2	110857157	110857491	+	0.1	NA	intron (NM_001371254, intron 10 of 18)	MLT1L|LTR|ERVL-MaLR	124751	NM_001365487	55289	Hs.253320	NM_018308	ENSG00000153093	ACOXL	-	acyl-CoA oxidase like	protein-coding
13.3-5	chr2	165236709	165236971	+	0.1	NA	Intergenic	Intergenic	-2574	NM_001040142	6326	Hs.93485	NM_021007	ENSG00000136531	SCN2A	BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2	sodium voltage-gated channel alpha subunit 2	protein-coding
20.0333-8	chr2	19392760	19393244	+	0.1	NA	Intergenic	MamGyp-int|LTR|Gypsy	-34379	NM_145260	130497	Hs.123933	NM_145260	ENSG00000143867	OSR1	ODD	odd-skipped related transcription factor 1	protein-coding
13.7333-7	chr7	42537433	42537703	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	168879	NR_110833	101928795	Hs.566753	NR_110833	ENSG00000238284	LINC01448	-	long intergenic non-protein coding RNA 1448	ncRNA
5.76667	chr10	110403974	110404031	+	0.1	NA	Intergenic	Intergenic	-93905	NM_004419	1847	Hs.2128	NM_004419	ENSG00000138166	DUSP5	DUSP|HVH3	dual specificity phosphatase 5	protein-coding
35.1333-10	chr9	105132315	105132796	+	0.1	NA	Intergenic	AluSx3|SINE|Alu	-112050	NM_001330731	23446	Hs.573495	NM_022109	ENSG00000070214	SLC44A1	CD92|CDW92|CHTL1|CTL1	solute carrier family 44 member 1	protein-coding
23.9-12	chr7	25890438	25890914	+	0.1	NA	Intergenic	Intergenic	59310	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA
13.4667-2	chr15	54303988	54304150	+	0.1	NA	intron (NM_001329919, intron 12 of 31)	MER58A|DNA|hAT-Charlie	291421	NM_001080534	440279	Hs.657273	NM_001080534	ENSG00000137766	UNC13C	-	unc-13 homolog C	protein-coding
16.7333-13	chr6	43807265	43807648	+	0.1	NA	Intergenic	Intergenic	35488	NM_001287044	7422	Hs.73793	NM_003376	ENSG00000112715	VEGFA	MVCD1|VEGF|VPF	vascular endothelial growth factor A	protein-coding
16.1333-14	chr5	105376925	105377217	+	0.1	NA	Intergenic	L1PA15-16|LINE|L1	277597	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
33.7667-4	chr15	83853526	83853976	+	0.1	NA	intron (NM_207517, intron 7 of 29)	L1M4|LINE|L1	199628	NM_207517	57188	Hs.459162	NM_207517	ENSG00000156218	ADAMTSL3	ADAMTSL-3	ADAMTS like 3	protein-coding
15.5	chr10	84967914	84968257	+	0.1	NA	Intergenic	Intergenic	230820	NR_120668	101929624	Hs.588831	NR_120667	ENSG00000237267	LINC01519	-	long intergenic non-protein coding RNA 1519	ncRNA
26.7-8	chr3	98523756	98524402	+	0.1	NA	Intergenic	Intergenic	-1013	NM_019895	56650	Hs.531371	NM_019895	ENSG00000080822	CLDND1	C3orf4|GENX-3745|Z38	claudin domain containing 1	protein-coding
30.9667-6	chr8	134661754	134662261	+	0.1	NA	intron (NM_020863, intron 1 of 15)	MLT1A0|LTR|ERVL-MaLR	34548	NM_001029939	57623	Hs.446172	NM_020863	ENSG00000066827	ZFAT	AITD3|ZFAT1|ZNF406	zinc finger and AT-hook domain containing	protein-coding
11.3333-3	chr3	151274358	151274521	+	0.1	NA	intron (NM_014879, intron 1 of 2)	intron (NM_014879, intron 1 of 2)	4103	NM_014879	9934	Hs.2465	NM_014879	ENSG00000174944	P2RY14	BPR105|GPR105|P2Y14	purinergic receptor P2Y14	protein-coding
23.3667-9	chr2	128089895	128090283	+	0.1	NA	Intergenic	AluYc|SINE|Alu	-1111	NR_027671	56886	Hs.743306	NM_020120	ENSG00000136731	UGGT1	HUGT1|UGCGL1|UGT1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
45.6667-3	chr5	9958688	9959376	+	0.1	NA	Intergenic	MER50B|LTR|ERV1	-55208	NR_027112	285692	Hs.651487	NR_027112	ENSG00000249781	LINC02112	-	long intergenic non-protein coding RNA 2112	ncRNA
22.2333-14	chr5	10160382	10160858	+	0.1	NA	Intergenic	MER41B|LTR|ERV1	89268	NM_199133	134145	Hs.481569	NM_199133	ENSG00000150756	ATPSCKMT	FAM173B|JS-2|hFAM173B	ATP synthase c subunit lysine N-methyltransferase	protein-coding
28.4-8	chr2	188257902	188258470	+	0.1	NA	intron (NR_126396, intron 1 of 2)	L1MEj|LINE|L1	29505	NR_126396	104355152		NR_126396	ENSG00000231689	LINC01090	-	long intergenic non-protein coding RNA 1090	ncRNA
24.6667-7	chr17	54077279	54077792	+	0.1	NA	Intergenic	Intergenic	254608	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
11.9667-2	chr14	67167200	67167341	+	0.1	NA	intron (NM_001024218, intron 19 of 21)	intron (NM_001024218, intron 19 of 21)	-22170	NM_173526	161142	Hs.412818	NM_173526	ENSG00000172717	FAM71D	C14orf54	family with sequence similarity 71 member D	protein-coding
19.5-4	chr10	117649590	117649965	+	0.1	NA	Intergenic	Intergenic	-104709	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA
26-6	chr5	125539362	125540018	+	0.1	NA	intron (NR_109887, intron 3 of 3)	L1ME1|LINE|L1	46429	NR_109887	101927460	Hs.407582	NR_109887	ENSG00000260192	LINC02240	-	long intergenic non-protein coding RNA 2240	ncRNA
21.5667-9	chr4	33534197	33534531	+	0.1	NA	Intergenic	Intergenic	505529	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
27.3667-6	chr4	84835420	84835916	+	0.1	NA	intron (NM_014991, intron 7 of 67)	intron (NM_014991, intron 7 of 67)	-129948	NR_152771	404201	Hs.46730	NM_205857	ENSG00000180769	WDFY3-AS2	C4orf12|FBI4|NCRNA00247	WDFY3 antisense RNA 2	ncRNA
20.9-12	chr2	111050078	111050373	+	0.1	NA	intron (NM_001371254, intron 17 of 18)	intron (NM_001371254, intron 17 of 18)	65363	NR_122074	400997	Hs.652337	NR_122074	ENSG00000204581	ACOXL-AS1	-	ACOXL antisense RNA 1	ncRNA
22.2333-17	chr8	96778678	96779006	+	0.1	NA	intron (NM_016134, intron 1 of 7)	AluSq4|SINE|Alu	133600	NM_016134	10404	Hs.156178	NM_016134	ENSG00000104324	CPQ	LDP|PGCP	carboxypeptidase Q	protein-coding
31.6667-2	chr1	100750045	100750482	+	0.1	NA	Intergenic	Intergenic	30521	NM_001078	7412	Hs.109225	NM_001078	ENSG00000162692	VCAM1	CD106|INCAM-100	vascular cell adhesion molecule 1	protein-coding
15.9333-8	chr20	63181959	63182283	+	0.1	NA	Intergenic	Intergenic	3621	NR_029670	406909		NR_029670	ENSG00000207598	MIR124-3	MIRN124-3|MIRN124A3|mir-124-3	microRNA 124-3	ncRNA
27.6667	chr1	216934598	216935085	+	0.1	NA	intron (NM_001350123, intron 2 of 8)	intron (NM_001350123, intron 2 of 8)	4832	NM_001243512	2104	Hs.444225	NM_001438	ENSG00000196482	ESRRG	ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3	estrogen related receptor gamma	protein-coding
10.3-5	chr17	73053257	73053449	+	0.1	NA	intron (NM_001352692, intron 3 of 9)	intron (NM_001352692, intron 3 of 9)	39335	NM_001159770	201266	Hs.221127	NM_139177	ENSG00000133195	SLC39A11	C17orf26|ZIP-11|ZIP11	solute carrier family 39 member 11	protein-coding
24.7667-3	chr13	74062820	74063187	+	0.1	NA	intron (NM_007249, intron 1 of 7)	intron (NM_007249, intron 1 of 7)	70926	NM_007249	11278	Hs.373857	NM_007249	ENSG00000118922	KLF12	AP-2rep|AP2REP|HSPC122	Kruppel like factor 12	protein-coding
30.1333-13	chr9	104567356	104567953	+	0.1	NA	Intergenic	Intergenic	-1514	NM_001004483	138802	Hs.553599	NM_001004483	ENSG00000186943	OR13C8	OR37H|OR9-10	olfactory receptor family 13 subfamily C member 8	protein-coding
28.2333-3	chr10	44345542	44346154	+	0.1	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	39249	NM_001033886	6387	Hs.522891	NM_000609	ENSG00000107562	CXCL12	IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1	C-X-C motif chemokine ligand 12	protein-coding
24.2667-2	chr1	51981332	51981861	+	0.1	NA	intron (NM_002867, intron 1 of 4)	intron (NM_002867, intron 1 of 4)	9104	NM_002867	5865	Hs.123072	NM_002867	ENSG00000169213	RAB3B	-	RAB3B, member RAS oncogene family	protein-coding
17.0333-3	chr2	30691076	30691430	+	0.1	NA	Intergenic	L2c|LINE|L2	116193	NM_144575	92291	Hs.660911	NM_144575	ENSG00000162949	CAPN13	-	calpain 13	protein-coding
37.3667-3	chr13	22163685	22164210	+	0.1	NA	Intergenic	L1MB7|LINE|L1	-46338	NR_103810	100506622	Hs.255773	NR_103810	ENSG00000276476	LINC00540	-	long intergenic non-protein coding RNA 540	ncRNA
27.4333	chr1	216825100	216825575	+	0.1	NA	intron (NM_001243513, intron 1 of 7)	intron (NM_001243513, intron 1 of 7)	-19952	NM_001243514	2104	Hs.444225	NM_001438	ENSG00000196482	ESRRG	ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3	estrogen related receptor gamma	protein-coding
22.5-2	chr2	6722285	6722568	+	0.1	NA	Intergenic	MIR|SINE|MIR	47885	NR_038369	400941	Hs.446195	NM_001001695	ENSG00000205837	LINC00487	-	long intergenic non-protein coding RNA 487	ncRNA
19.0667-5	chr18	37815868	37816193	+	0.1	NA	Intergenic	AluSx3|SINE|Alu	158895	NR_036202	100422857		NR_036202	ENSG00000266530	MIR4318	-	microRNA 4318	ncRNA
21.8-5	chr12	74824569	74824942	+	0.1	NA	Intergenic	Intergenic	286920	NM_001136262	552889	Hs.744849	NM_001136262	ENSG00000253719	ATXN7L3B	lnc-SCA7	ataxin 7 like 3B	protein-coding
21.9667-10	chr6	21907274	21907581	+	0.1	NA	intron (NR_015410, intron 4 of 11)	intron (NR_015410, intron 4 of 11)	239766	NR_034143	729177	Hs.730673	NR_034143	ENSG00000260455	NBAT1	CASC14|NBAT-1	neuroblastoma associated transcript 1	ncRNA
34.7	chr1	106485018	106485496	+	0.1	NA	Intergenic	HAL1|LINE|L1	-332982	NR_147165	105378889	Hs.568674	NR_147165	ENSG00000237460	LINC01661	-	long intergenic non-protein coding RNA 1661	ncRNA
20.9-15	chr3	85345971	85346223	+	0.1	NA	intron (NM_001167674, intron 1 of 9)	intron (NM_001167674, intron 1 of 9)	-39613	NR_049870	100847077		NR_049870	ENSG00000264084	MIR5688	-	microRNA 5688	ncRNA
23.2333-9	chr8	88983026	88983354	+	0.1	NA	Intergenic	Intergenic	-655707	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
24.5667-4	chr13	25644352	25644710	+	0.1	NA	intron (NM_016529, intron 24 of 36)	L1ME3F|LINE|L1	175757	NM_001313741	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding
17.2-8	chr6	25699089	25699397	+	0.1	NA	intron (NM_006998, intron 10 of 10)	MER101|LTR|ERV1	27319	NM_170745	221613	Hs.406739	NM_170745	ENSG00000164508	HIST1H2AA	H2AA|H2AFR|TH2A|bA317E16.2	histone cluster 1 H2A family member a	protein-coding
25.8667-3	chr14	71266249	71266793	+	0.1	NA	Intergenic	L1M4a1|LINE|L1	-53955	NM_001354289	26037	Hs.654657	NM_015556	ENSG00000197555	SIPA1L1	E6TP1|SPAR1	signal induced proliferation associated 1 like 1	protein-coding
26.7-3	chr11	65438004	65438568	+	0.1	NA	non-coding (NR_131012, exon 1 of 1)	non-coding (NR_131012, exon 1 of 1)	-6172	NR_030343	693197		NR_030343	ENSG00000283791	MIR612	MIRN612|hsa-mir-612	microRNA 612	ncRNA
44.5333-5	chr2	235732117	235732845	+	0.1	NA	intron (NM_001037131, intron 3 of 17)	HAL1b|LINE|L1	-214560	NR_146582	27321		NR_146582		TNRC17	CAGL234	trinucleotide repeat containing 17	ncRNA
24.6667-12	chr9	19934865	19935391	+	0.1	NA	Intergenic	Intergenic	-148109	NM_020344	25769	Hs.283014	NM_020344	ENSG00000155886	SLC24A2	NCKX2	solute carrier family 24 member 2	protein-coding
17.7-15	chr6	134841161	134841469	+	0.1	NA	Intergenic	AluJb|SINE|Alu	108786	NM_001193480	64577	Hs.486520	NM_022568	ENSG00000118514	ALDH8A1	ALDH12|DJ352A20.2	aldehyde dehydrogenase 8 family member A1	protein-coding
25.8333-9	chr3	70632746	70633021	+	0.1	NA	Intergenic	Intergenic	-320245	NM_001364676	107986096		NM_001364676	ENSG00000242120	MDFIC2	-	MyoD family inhibitor domain containing 2	protein-coding
29.2333	chr13	61452258	61452817	+	0.1	NA	Intergenic	L1MB1|LINE|L1	-24591	NR_134946	101926951	Hs.732367	NR_134946	ENSG00000279797	LINC02339	-	long intergenic non-protein coding RNA 2339	ncRNA
41.7-4	chr20	10569306	10570017	+	0.1	NA	intron (NM_001009608, intron 4 of 7)	MLT1B|LTR|ERVL-MaLR	80034	NR_106930	102465525		NR_106930	ENSG00000273745	MIR6870	hsa-mir-6870	microRNA 6870	ncRNA
7.56666	chr2	72200634	72200764	+	0.1	NA	intron (NR_135773, intron 19 of 21)	MIRc|SINE|MIR	-52837	NM_019885	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
19.2-16	chrX	65972182	65972606	+	0.1	NA	Intergenic	MIR3|SINE|MIR	-46476	NR_029637	407008		NR_029637	ENSG00000284567	MIR223	MIRN223|miRNA223|mir-223	microRNA 223	ncRNA
13.9	chr1	201037058	201037220	+	0.1	NA	Intergenic	L2c|LINE|L2	-13425	NM_001252102	23046	Hs.169182	NM_017596	ENSG00000116852	KIF21B	-	kinesin family member 21B	protein-coding
25.1-3	chr18	7303152	7303769	+	0.1	NA	Intergenic	Intergenic	72356	NM_001105581	339291	Hs.647588	NM_001105581	ENSG00000206422	LRRC30	-	leucine rich repeat containing 30	protein-coding
33.8667-8	chr4	170646752	170647103	+	0.1	NA	Intergenic	MER121|DNA|hAT?	96808	NR_134683	100506107	Hs.380602	NR_134683	ENSG00000250968	LINC02382	-	long intergenic non-protein coding RNA 2382	ncRNA
41.3667-3	chr18	77790484	77791207	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	202882	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA
20.1667-8	chr21	26445297	26445794	+	0.1	NA	intron (NR_135515, intron 1 of 3)	MamGypsy2-I|LTR|Gypsy	39602	NR_135515	100996571	Hs.570432	NR_135515	ENSG00000197934	CYYR1-AS1	-	cysteine and tyrosine rich 1 antisense RNA 1	ncRNA
24.4-14	chr2	70181434	70181873	+	0.1	NA	exon (NM_001348761, exon 3 of 10)	exon (NM_001348761, exon 3 of 10)	9058	NM_001348764	54980	Hs.720049	NM_017880	ENSG00000115998	C2orf42	-	chromosome 2 open reading frame 42	protein-coding
9.03333	chr10	53939858	53939994	+	0.1	NA	intron (NM_001354411, intron 25 of 34)	intron (NM_001354411, intron 25 of 34)	-546304	NR_134503	105378311	Hs.623892	NR_134503	ENSG00000234173	LOC105378311	-	uncharacterized LOC105378311	ncRNA
11.9-6	chr8	117598842	117599074	+	0.1	NA	Intergenic	Intergenic	78245	NM_080651	90390	Hs.492612	NM_080651	ENSG00000164758	MED30	MED30S|THRAP6|TRAP25	mediator complex subunit 30	protein-coding
10.4-5	chr14	52300371	52300491	+	0.1	NA	Intergenic	Intergenic	-13881	NM_000956	5732	Hs.2090	NM_000956	ENSG00000125384	PTGER2	EP2	prostaglandin E receptor 2	protein-coding
15-10	chr6	154905140	154905363	+	0.1	NA	Intergenic	Intergenic	51891	NR_036100	100422821		NR_036100	ENSG00000264814	MIR1273C	-	microRNA 1273c	ncRNA
20.9333-14	chr5	157926532	157926870	+	0.1	NA	Intergenic	Intergenic	-67556	NM_014666	9685	Hs.644000	NM_014666	ENSG00000113282	CLINT1	CLINT|ENTH|EPN4|EPNR	clathrin interactor 1	protein-coding
26.2333-14	chr6	57028027	57028669	+	0.1	NA	Intergenic	L1M7|LINE|L1	-18184	NM_001286274	57691	Hs.709521	NM_020931	ENSG00000168116	KIAA1586	-	KIAA1586	protein-coding
10.3333-5	chr4	14031147	14031272	+	0.1	NA	Intergenic	Intergenic	-80759	NR_033931	152742	Hs.135435	NR_033931	ENSG00000248698	LINC01085	-	long intergenic non-protein coding RNA 1085	ncRNA
15.1-3	chr1	175688891	175689151	+	0.1	NA	intron (NM_003285, intron 1 of 22)	L2b|LINE|L2	54574	NM_001328635	7143	Hs.659864	NM_003285	ENSG00000116147	TNR	TN-R	tenascin R	protein-coding
16.6333	chr12	97025852	97026150	+	0.1	NA	Intergenic	Intergenic	118535	NM_001135175	121441	Hs.270084	NM_152905	ENSG00000139350	NEDD1	GCP-WD|TUBGCP7	NEDD1 gamma-tubulin ring complex targeting factor	protein-coding
22.0667-6	chr20	48987365	48987716	+	0.1	NA	intron (NM_006420, intron 16 of 38)	L2a|LINE|L2	58516	NR_110624	102723483	Hs.209000	NR_110624	ENSG00000227431	CSE1L-AS1	-	CSE1L antisense RNA 1	ncRNA
30.8667-4	chr21	29097322	29097744	+	0.1	NA	intron (NM_001286634, intron 5 of 7)	intron (NM_001286634, intron 5 of 7)	5279	NM_001286619	56911	Hs.222802	NM_020152	ENSG00000156265	MAP3K7CL	C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4	MAP3K7 C-terminal like	protein-coding
16.5333-13	chr9	72979842	72980274	+	0.1	NA	Intergenic	Intergenic	-27005	NM_000689	216	Hs.76392	NM_000689	ENSG00000165092	ALDH1A1	ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1	aldehyde dehydrogenase 1 family member A1	protein-coding
22.8-8	chr18	75198899	75199172	+	0.1	NA	3' UTR (NM_175907, exon 2 of 2)	3' UTR (NM_175907, exon 2 of 2)	6478	NM_001306093	284273	Hs.465433	NM_175907	ENSG00000180011	ZADH2	PRG-3	zinc binding alcohol dehydrogenase domain containing 2	protein-coding
34.5667-4	chr3	120609238	120609636	+	0.1	NA	Intergenic	Intergenic	13101	NM_004547	4710	Hs.304613	NM_004547	ENSG00000065518	NDUFB4	B15|CI-B15	NADH:ubiquinone oxidoreductase subunit B4	protein-coding
35.3333-4	chr12	120189185	120189758	+	0.1	NA	intron (NM_006836, intron 2 of 57)	AluSg|SINE|Alu	5244	NM_006836	10985	Hs.298716	NM_006836	ENSG00000089154	GCN1	GCN1L|GCN1L1|PRIC295	GCN1 activator of EIF2AK4	protein-coding
32.1667-5	chr2	43621432	43621884	+	0.1	NA	Intergenic	Intergenic	-15602	NM_172069	130271	Hs.164162	NM_172069	ENSG00000152527	PLEKHH2	PLEKHH1L	pleckstrin homology, MyTH4 and FERM domain containing H2	protein-coding
11.3667-4	chr17	48972884	48973005	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-4348	NM_004123	2695	Hs.1454	NM_004123	ENSG00000159224	GIP	-	gastric inhibitory polypeptide	protein-coding
10.5-4	chr4	22715424	22715639	+	0.1	NA	intron (NR_102357, intron 1 of 4)	MLT1C|LTR|ERVL-MaLR	1442	NM_001277225	57733	Hs.653107	NM_020973	ENSG00000249948	GBA3	CBG|CBGL1|GLUC|KLRP	glucosylceramidase beta 3 (gene/pseudogene)	protein-coding
35.6667	chr1	112371397	112371788	+	0.1	NA	Intergenic	Intergenic	-24622	NM_018704	55917	Hs.744100	NM_018704	ENSG00000143079	CTTNBP2NL	-	CTTNBP2 N-terminal like	protein-coding
11.7667-6	chr2	65623228	65623437	+	0.1	NA	Intergenic	L2b|LINE|L2	-190733	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding
43.5-5	chr8	73668234	73668707	+	0.1	NA	intron (NM_001164383, intron 1 of 9)	LTR83|LTR|ERVL	78370	NM_001164380	27067	Hs.561815	NM_014393	ENSG00000040341	STAU2	39K2|39K3	staufen double-stranded RNA binding protein 2	protein-coding
29.1-8	chr5	135447382	135447749	+	0.1	NA	promoter-TSS (NM_130848)	promoter-TSS (NM_130848)	-217	NM_130848	140947	Hs.152477	NM_130848	ENSG00000251380	DCANP1	C5orf20|DCNP1	dendritic cell associated nuclear protein	protein-coding
27.5-2	chr13	109818737	109819164	+	0.1	NA	Intergenic	Intergenic	-32367	NM_003749	8660	Hs.442344	NM_003749	ENSG00000185950	IRS2	IRS-2	insulin receptor substrate 2	protein-coding
15.6-3	chr17	17653021	17653297	+	0.1	NA	Intergenic	MSTB1|LTR|ERVL-MaLR	24529	NR_131243	105371564	Hs.369680	NR_131243	ENSG00000223979	SMCR2	TCONS_00025215	Smith-Magenis syndrome chromosome region, candidate 2	ncRNA
25.4333-10	chr3	158306068	158306536	+	0.1	NA	intron (NM_001271838, intron 5 of 9)	intron (NM_001271838, intron 5 of 9)	196213	NM_001271838	51319	Hs.591283	NM_016625	ENSG00000174891	RSRC1	BM-011|MRT70|SFRS21|SRrp53	arginine and serine rich coiled-coil 1	protein-coding
26.2333-10	chr4	3328113	3328414	+	0.1	NA	intron (NM_002926, intron 2 of 16)	L1PB4|LINE|L1	14116	NM_198229	6002	Hs.527061	NM_002926	ENSG00000159788	RGS12	-	regulator of G protein signaling 12	protein-coding
36.6-6	chr3	130932973	130933526	+	0.1	NA	intron (NM_001001485, intron 4 of 27)	intron (NM_001001485, intron 4 of 27)	38659	NM_001001486	27032	Hs.584884	NM_014382	ENSG00000017260	ATP2C1	ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1	ATPase secretory pathway Ca2+ transporting 1	protein-coding
31.5667	chr14	30421280	30421819	+	0.1	NA	Intergenic	Intergenic	-137574	NM_001308097	55632	Hs.509008	NM_017769	ENSG00000092140	G2E3	KIAA1333|PHF7B	G2/M-phase specific E3 ubiquitin protein ligase	protein-coding
18.4-6	chr2	139874887	139875172	+	0.1	NA	Intergenic	Intergenic	711656	NR_106979	102465692		NR_106979	ENSG00000283506	MIR7157	hsa-mir-7157	microRNA 7157	ncRNA
14.2667-7	chr20	8900489	8900766	+	0.1	NA	Intergenic	MER102c|DNA|hAT-Charlie	69442	NR_004386	26767		NR_004386	ENSG00000201348	RNU105B	105B|E1-2	RNA, U105B small nucleolar	snoRNA
11.7333-4	chr4	133115090	133115226	+	0.1	NA	intron (NR_125885, intron 7 of 8)	intron (NR_125885, intron 7 of 8)	33958	NR_125885	101927359	Hs.649960	NR_125885	ENSG00000250241	LOC101927359	-	uncharacterized LOC101927359	ncRNA
15.4-2	chr1	59259058	59259261	+	0.1	NA	Intergenic	L1ME3|LINE|L1	-37654	NM_001350793	55277	Hs.444301	NM_018291	ENSG00000172456	FGGY	-	FGGY carbohydrate kinase domain containing	protein-coding
25.5333-8	chr3	166003338	166003670	+	0.1	NA	Intergenic	L1ME3E|LINE|L1	-166081	NM_000055	590	Hs.420483	NM_000055	ENSG00000114200	BCHE	BCHED|CHE1|CHE2|E1	butyrylcholinesterase	protein-coding
32.3667-9	chr8	62678918	62679241	+	0.1	NA	intron (NM_001304533, intron 3 of 6)	intron (NM_001304533, intron 3 of 6)	-298782	NR_027378	643763	Hs.491856	NM_001039769	ENSG00000274956	NKAIN3-IT1	UG0898H09	NKAIN3 intronic transcript	ncRNA
9.56667-3	chr14	26896301	26896396	+	0.1	NA	intron (NR_110041, intron 3 of 3)	intron (NR_110041, intron 3 of 3)	-12294	NR_036193	100423019		NR_036193	ENSG00000265165	MIR4307	-	microRNA 4307	ncRNA
14.9667-6	chr2	86825447	86825749	+	0.1	NA	intron (NM_172101, intron 5 of 6)	intron (NM_172101, intron 5 of 6)	-17202	NM_001145873	925	Hs.85258	NM_001768	ENSG00000153563	CD8A	CD8|Leu2|p32	CD8a molecule	protein-coding
25.2-4	chr13	62862301	62862671	+	0.1	NA	Intergenic	ERVL-E-int|LTR|ERVL	-55127	NR_120403	100874176	Hs.402083	NR_047029		LINC00448	-	long intergenic non-protein coding RNA 448	ncRNA
8.5-2	chr16	68591730	68591829	+	0.1	NA	Intergenic	L1MC4|LINE|L1	52488	NM_133458	146198	Hs.461074	NM_133458	ENSG00000184939	ZFP90	FIK|NK10|ZNF756|zfp-90	ZFP90 zinc finger protein	protein-coding
13.9-3	chr14	51443741	51443920	+	0.1	NA	Intergenic	Intergenic	-45298	NM_001042481	122786	Hs.434914	NM_152330	ENSG00000139926	FRMD6	C14orf31|EX1|Willin|c14_5320	FERM domain containing 6	protein-coding
31.5-4	chr10	33415323	33415790	+	0.1	NA	Intergenic	L1PA16|LINE|L1	-80651	NM_001244973	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding
27.9333-10	chrX	99491532	99491864	+	0.1	NA	Intergenic	Intergenic	918575	NM_020766	57526	Hs.4993	NM_020766	ENSG00000165194	PCDH19	EFMR|EIEE9	protocadherin 19	protein-coding
20.5667-3	chr12	2183051	2183493	+	0.1	NA	intron (NM_199460, intron 3 of 49).2	intron (NM_199460, intron 3 of 49).2	40209	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA
16.8333-5	chr2	24849557	24849739	+	0.1	NA	intron (NM_001320613, intron 3 of 21)	intron (NM_001320613, intron 3 of 21)	56223	NM_001322101	79172	Hs.731569	NM_024322	ENSG00000138092	CENPO	CENP-O|ICEN-36|MCM21R	centromere protein O	protein-coding
29.7333-7	chr16	60517899	60518437	+	0.1	NA	Intergenic	L1MA4A|LINE|L1	-158375	NM_001282301	729159		NM_001282301		NPAP1L	-	nuclear pore associated protein 1 like	protein-coding
52.5667	chr1	170367193	170367974	+	0.1	NA	Intergenic	L1MA4A|LINE|L1	-83375	NR_026957	284688	Hs.135668	NR_026957	ENSG00000224286	LINC01142	-	long intergenic non-protein coding RNA 1142	ncRNA
19-18	chr6	62006682	62006951	+	0.1	NA	intron (NR_146874, intron 3 of 13)	L1MEd|LINE|L1	279409	NR_146873	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
17.7667-14	chr9	81476735	81476974	+	0.1	NA	Intergenic	Intergenic	212681	NM_001303103	7088	Hs.197320	NM_005077	ENSG00000196781	TLE1	ESG|ESG1|GRG1	TLE family member 1, transcriptional corepressor	protein-coding
22.5	chr15	45831354	45831649	+	0.1	NA	intron (NR_135680, intron 1 of 4)	L1PA16|LINE|L1	126306	NR_135680	105370802	Hs.447522	NR_135680	ENSG00000259200	LOC105370802	-	uncharacterized LOC105370802	ncRNA
9.43333-2	chr20	9727572	9727667	+	0.1	NA	intron (NM_177990, intron 1 of 9)	L1MC4a|LINE|L1	111457	NM_177990	57144	Hs.32539	NM_020341	ENSG00000101349	PAK5	PAK7	p21 (RAC1) activated kinase 5	protein-coding
13.3667	chr1	25600843	25600977	+	0.1	NA	Intergenic	AluSz|SINE|Alu	-16558	NM_020379	57134	Hs.197043	NM_020379	ENSG00000117643	MAN1C1	HMIC|MAN1A3|MAN1C|pp6318	mannosidase alpha class 1C member 1	protein-coding
28.8667-4	chr4	166579226	166579719	+	0.1	NA	Intergenic	L2b|LINE|L2	654954	NM_001204353	50859	Hs.481133	NM_016950	ENSG00000196104	SPOCK3	HSAJ1454|TES-3|TICN3	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3	protein-coding
31.1333-6	chr20	51284640	51285063	+	0.1	NA	Intergenic	MIRb|SINE|MIR	168126	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA
16.1667-16	chr8	119243607	119243831	+	0.1	NA	3' UTR (NM_052886, exon 4 of 4)	3' UTR (NM_052886, exon 4 of 4)	3138	NR_149114	105375726	Hs.666095	NR_149111		MAL2-AS1	-	MAL2 antisense RNA 1	ncRNA
11.7667	chr1	101117833	101117950	+	0.1	NA	Intergenic	FLAM_C|SINE|Alu	92045	NR_109849	102606465	Hs.593669	NR_109849		LOC102606465	-	uncharacterized LOC102606465	ncRNA
15.1667-4	chr13	76645759	76645976	+	0.1	NA	Intergenic	Intergenic	240538	NM_138444	115207	Hs.644125	NM_138444	ENSG00000178695	KCTD12	C13orf2|PFET1|PFETIN	potassium channel tetramerization domain containing 12	protein-coding
21.4333	chr1	43422737	43423071	+	0.1	NA	intron (NM_015284, intron 14 of 70)	intron (NM_015284, intron 14 of 70)	-25635	NR_106793	102465440		NR_106793	ENSG00000274975	MIR6735	hsa-mir-6735	microRNA 6735	ncRNA
39.0333-5	chr6	107964962	107965570	+	0.1	NA	Intergenic	MER61A|LTR|ERV1	-7058	NM_007214	11231	Hs.26904	NM_007214	ENSG00000025796	SEC63	DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L	SEC63 homolog, protein translocation regulator	protein-coding
42.9333-2	chr14	67837666	67838212	+	0.1	NA	intron (NM_133509, intron 4 of 10)	L1MA5|LINE|L1	14347	NM_001321815	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
19.5667-4	chr12	13224934	13225340	+	0.1	NA	Intergenic	Intergenic	28411	NM_001423	2012	Hs.719042	NM_001423	ENSG00000134531	EMP1	CL-20|EMP-1|TMP	epithelial membrane protein 1	protein-coding
18.5333-12	chr19	28894131	28894522	+	0.1	NA	Intergenic	Intergenic	-70805	NR_027318	148145	Hs.112651	NR_027318	ENSG00000267339	LINC00906	-	long intergenic non-protein coding RNA 906	ncRNA
22.7667-8	chr17	60956782	60957069	+	0.1	NA	intron (NM_001330413, intron 14 of 25)	intron (NM_001330413, intron 14 of 25)	279074	NM_001353144	54828	Hs.655028	NM_017679	ENSG00000141376	BCAS3	GAOB1|MAAB	BCAS3 microtubule associated cell migration factor	protein-coding
13.3333-14	chr5	2274064	2274287	+	0.1	NA	Intergenic	L1PA11|LINE|L1	38026	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA
42.3667-3	chr6	45391095	45391944	+	0.1	NA	intron (NM_001015051, intron 2 of 7)	MSTB|LTR|ERVL-MaLR	-13585	NM_001350325	8464	Hs.368325	NM_003599	ENSG00000196284	SUPT3H	SPT3|SPT3L	SPT3 homolog, SAGA and STAGA complex component	protein-coding
56.2-3	chr8	82346698	82347824	+	0.1	NA	Intergenic	HAL1|LINE|L1	-504975	NM_022133	64089	Hs.492121	NM_022133	ENSG00000104497	SNX16	-	sorting nexin 16	protein-coding
33.6333-7	chr7	27316784	27317354	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-69840	NR_120507	101410536	Hs.687800	NR_120507	ENSG00000253405	EVX1-AS	EVX1-AS1	EVX1 antisense RNA	ncRNA
29.3667-2	chr1	240043985	240044360	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	36648	NR_036695	645884	Hs.613280	NR_036695		RPS7P5	RPS7_2_183	ribosomal protein S7 pseudogene 5	pseudo
31.3667-2	chr15	36190503	36191130	+	0.1	NA	Intergenic	L1ME3A|LINE|L1	263960	NR_039735	100616293		NR_039735	ENSG00000265098	MIR4510	mir-4510	microRNA 4510	ncRNA
23.7333-3	chr15	59456216	59456611	+	0.1	NA	intron (NM_152450, intron 1 of 8)	intron (NM_152450, intron 1 of 8)	18227	NM_152450	145773	Hs.531168	NM_152450	ENSG00000157470	FAM81A	-	family with sequence similarity 81 member A	protein-coding
33.4667-10	chr9	78544335	78544781	+	0.1	NA	Intergenic	AluSz|SINE|Alu	247433	NM_058179	29968	Hs.494261	NM_021154	ENSG00000135069	PSAT1	EPIP|NLS2|PSA|PSAT|PSATD	phosphoserine aminotransferase 1	protein-coding
13.9-2	chr10	9592838	9593002	+	0.1	NA	Intergenic	L1ME1|LINE|L1	-297327	NR_120635	101928272	Hs.650697	NR_120635		LOC101928272	-	uncharacterized LOC101928272	ncRNA
22.8-12	chr3	6737947	6738358	+	0.1	NA	intron (NR_110125, intron 2 of 3)	intron (NR_110125, intron 2 of 3)	67297	NR_110125	101927347	Hs.333345	NR_110123	ENSG00000226258	GRM7-AS3	-	GRM7 antisense RNA 3	ncRNA
14.4333-5	chr4	186221278	186221502	+	0.1	NA	Intergenic	L1M4|LINE|L1	-6117	NM_001318396	3818	Hs.237642	NM_000892	ENSG00000164344	KLKB1	KLK3|PKK|PKKD|PPK	kallikrein B1	protein-coding
20.9333-10	chr2	176014266	176014475	+	0.1	NA	Intergenic	AluSz|SINE|Alu	-11550	NR_130941	80856	Hs.209561	NM_030650	ENSG00000144320	LNPK	KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless	lunapark, ER junction formation factor	protein-coding
21.3333-8	chr5	170691186	170691648	+	0.1	NA	intron (NM_001278340, intron 2 of 8)	MIRb|SINE|MIR	-9947	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA
22.4333-6	chr13	110545716	110546058	+	0.1	NA	intron (NM_017817, intron 1 of 1)	intron (NM_017817, intron 1 of 1)	15835	NM_017817	55647	Hs.743563	NM_017817	ENSG00000139832	RAB20	-	RAB20, member RAS oncogene family	protein-coding
13.6	chr10	70490290	70490512	+	0.1	NA	intron (NM_014431, intron 1 of 19)	AluJb|SINE|Alu	11634	NM_014431	27143	Hs.202351	NM_014431	ENSG00000107719	PALD1	KIAA1274|PALD	phosphatase domain containing paladin 1	protein-coding
15.5667-9	chr4	30730329	30730567	+	0.1	NA	intron (NM_032457, intron 1 of 2)	intron (NM_032457, intron 1 of 2)	10079	NM_032456	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
13.1667-11	chr5	123168691	123168930	+	0.1	NA	intron (NM_001136239, intron 5 of 7)	intron (NM_001136239, intron 5 of 7)	-78494	NR_146771	105379152	Hs.537420	NR_146771		LOC105379152	-	uncharacterized LOC105379152	ncRNA
33.5333-2	chr4	30138913	30139346	+	0.1	NA	Intergenic	Intergenic	-581240	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
14.5667	chr1	230129412	230129601	+	0.1	NA	intron (NM_004481, intron 1 of 15)	AluJr|SINE|Alu	62268	NM_004481	2590	Hs.743964	NM_004481	ENSG00000143641	GALNT2	GalNAc-T2	polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
20.7667-8	chr4	23764125	23764649	+	0.1	NA	Intergenic	Intergenic	116905	NM_001330753	10891	Hs.527078	NM_013261	ENSG00000109819	PPARGC1A	LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1	PPARG coactivator 1 alpha	protein-coding
31.3-9	chr4	81690810	81691335	+	0.1	NA	Intergenic	Intergenic	-219165	NM_001300736	153020	Hs.591696	NM_152545	ENSG00000138670	RASGEF1B	GPIG4	RasGEF domain family member 1B	protein-coding
31.5-2	chr1	59470581	59471049	+	0.1	NA	intron (NM_001350794, intron 6 of 14)	intron (NM_001350794, intron 6 of 14)	-44815	NM_001278224	55277	Hs.444301	NM_018291	ENSG00000172456	FGGY	-	FGGY carbohydrate kinase domain containing	protein-coding
31.5-9	chr18	5861911	5862369	+	0.1	NA	Intergenic	AluSg4|SINE|Alu	21445	NR_039772	100616244		NR_039772	ENSG00000272380	MIR3976	-	microRNA 3976	ncRNA
29.1333-6	chr22	30366048	30366673	+	0.1	NA	3' UTR (NM_001318335, exon 3 of 3)	3' UTR (NM_001318335, exon 3 of 3)	-9466	NM_005877	10291	Hs.406277	NM_005877	ENSG00000099995	SF3A1	PRP21|PRPF21|SAP114|SF3A120	splicing factor 3a subunit 1	protein-coding
31.7-3	chr13	55592389	55592728	+	0.1	NA	Intergenic	L1M5|LINE|L1	418104	NR_049804	100846996		NR_049804	ENSG00000264387	MIR5007	-	microRNA 5007	ncRNA
31.4667-7	chr6	51049486	51049974	+	0.1	NA	Intergenic	Intergenic	230859	NM_003221	7021	Hs.33102	NM_003221	ENSG00000008196	TFAP2B	AP-2B|AP2-B|PDA2	transcription factor AP-2 beta	protein-coding
17.4-11	chr5	67284236	67284604	+	0.1	NA	Intergenic	MER58B|DNA|hAT-Charlie	-87621	NM_005582	4064	Hs.87205	NM_005582	ENSG00000134061	CD180	LY64|Ly78|RP105	CD180 molecule	protein-coding
17.3667-4	chr20	10134997	10135223	+	0.1	NA	intron (NR_040710, intron 2 of 4)	MamSINE1|SINE|tRNA-RTE	-83688	NM_001322910	6616	Hs.167317	NM_003081	ENSG00000132639	SNAP25	CMS18|RIC-4|RIC4|SEC9|SNAP|SNAP-25|SUP|bA416N4.2|dJ1068F16.2	synaptosome associated protein 25	protein-coding
9.7-2	chr17	75626157	75626321	+	0.1	NA	TTS (NM_004259)	TTS (NM_004259)	-7195	NM_001162995	643008	Hs.528605	NM_001162995	ENSG00000204323	SMIM5	C17orf109|PP12104	small integral membrane protein 5	protein-coding
11.5333-5	chr3	35892033	35892148	+	0.1	NA	Intergenic	ERVL-E-int|LTR|ERVL	147614	NR_029824	406916		NR_029824	ENSG00000207625	MIR128-2	MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b	microRNA 128-2	ncRNA
21.9333-13	chr3	51768411	51768720	+	0.1	NA	Intergenic	AluJb|SINE|Alu	10672	NM_001368368	440956	Hs.444316	NM_001143833	ENSG00000214686	IQCF6	-	IQ motif containing F6	protein-coding
13.4-3	chr14	44898504	44898781	+	0.1	NA	TTS (NR_110050)	TTS (NR_110050)	1367	NM_001017923	122525	Hs.82098	NM_001017923	ENSG00000179476	C14orf28	DRIP-1|DRIP1|c14_5270	chromosome 14 open reading frame 28	protein-coding
16.5-3	chr2	28217577	28218009	+	0.1	NA	intron (NM_199193, intron 8 of 13)	L2a|LINE|L2	-10832	NR_120504	100505736	Hs.659540	NR_120504		LOC100505736	-	uncharacterized LOC100505736	ncRNA
18.9-17	chr8	88071182	88071444	+	0.1	NA	intron (NM_005941, intron 7 of 9)	intron (NM_005941, intron 7 of 9)	-197298	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
21.9-7	chr22	48201554	48202028	+	0.1	NA	Intergenic	L1MB7|LINE|L1	-72573	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA
24.9667-6	chr19	5750145	5750536	+	0.1	NA	intron (NM_152784, intron 11 of 21)	AluY|SINE|Alu	29703	NM_152784	257062	Hs.631842	NM_152784	ENSG00000174898	CATSPERD	TMEM146	cation channel sperm associated auxiliary subunit delta	protein-coding
8.26667-4	chr7	102410249	102410331	+	0.1	NA	intron (NR_038967, intron 8 of 8)	L1M4|LINE|L1	-4435	NR_031669	100313829		NR_031669	ENSG00000221510	MIR548O	MIRN548O	microRNA 548o	ncRNA
32.6667-5	chr3	89918270	89918732	+	0.1	NA	Intergenic	Intergenic	810880	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
30.7667-7	chr2	190808124	190808533	+	0.1	NA	Intergenic	Intergenic	-72493	NM_014905	2744	Hs.116448	NM_014905	ENSG00000115419	GLS	AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA	glutaminase	protein-coding
32.9-3	chr14	65838150	65838647	+	0.1	NA	Intergenic	Intergenic	367296	NR_030355	693210		NR_030355	ENSG00000207781	MIR625	MIRN625|hsa-mir-625	microRNA 625	ncRNA
37.5333-2	chr10	69570184	69570745	+	0.1	NA	Intergenic	Intergenic	2958	NM_020999	50674	Hs.532682	NM_020999	ENSG00000122859	NEUROG3	Atoh5|Math4B|NGN-3|bHLHa7|ngn3	neurogenin 3	protein-coding
22.4-13	chr2	231115709	231116072	+	0.1	NA	intron (NM_000867, intron 2 of 3)	MER5A1|DNA|hAT-Charlie	9152	NM_001320758	3357	Hs.421649	NM_000867	ENSG00000135914	HTR2B	5-HT(2B)|5-HT-2B|5-HT2B	5-hydroxytryptamine receptor 2B	protein-coding
23.8	chr10	51376353	51376818	+	0.1	NA	intron (NM_001098512, intron 2 of 17)	L1ME4c|LINE|L1	77012	NR_030336	693190		NR_030336	ENSG00000207813	MIR605	MIRN605|hsa-mir-605|mir-605	microRNA 605	ncRNA
43.3-2	chr15	91830704	91831419	+	0.1	NA	Intergenic	MER21B|LTR|ERVL	-22647	NM_013272	28232	Hs.311187	NM_013272	ENSG00000176463	SLCO3A1	OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11	solute carrier organic anion transporter family member 3A1	protein-coding
15.6-10	chr5	134035401	134035586	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-30518	NM_003374	7416	Hs.519320	NM_003374	ENSG00000213585	VDAC1	PORIN|VDAC-1	voltage dependent anion channel 1	protein-coding
20.3667-10	chr6	5438799	5439075	+	0.1	NA	intron (NM_006567, intron 4 of 6)	L1MEf|LINE|L1	19138	NR_125846	101927972	Hs.668417	NR_125846	ENSG00000269985	LOC101927972	-	uncharacterized LOC101927972	ncRNA
6.6	chr11	77011399	77011544	+	0.1	NA	intron (NM_001300953, intron 6 of 9)	intron (NM_001300953, intron 6 of 9)	-22927	NM_138706	192134	Hs.352622	NM_138706	ENSG00000198488	B3GNT6	B3Gn-T6|BGnT-6|beta-1,3-Gn-T6|beta3Gn-T6	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6	protein-coding
14.2333-7	chr2	11127868	11128165	+	0.1	NA	intron (NR_040080, intron 3 of 8)	MLT1G3|LTR|ERVL-MaLR	4160	NR_040080	285150	Hs.329841	NM_182586	ENSG00000145063	FLJ33534	-	uncharacterized LOC285150	ncRNA
28.2667-2	chr11	125263922	125264369	+	0.1	NA	intron (NM_022062, intron 2 of 12)	intron (NM_022062, intron 2 of 12)	99394	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding
12.5667-10	chr8	118484086	118484249	+	0.1	NA	intron (NM_001101676, intron 2 of 4)	L2a|LINE|L2	-136834	NR_038210	552860	Hs.571527	NR_038210	ENSG00000281641	SAMD12-AS1	C8orf26|NCRNA00252	SAMD12 antisense RNA 1	ncRNA
26.2-2	chr10	111553675	111553957	+	0.1	NA	Intergenic	Intergenic	439525	NR_159949	113633881		NR_159949		HEAT2	lnc-ADRA2A-1:1	HEart disease Associated Transcript 2	ncRNA
11.1667-4	chr3	2055747	2055892	+	0.1	NA	Intergenic	Intergenic	-42984	NM_001350095	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
28-5	chr2	176702765	176703384	+	0.1	NA	Intergenic	MER5A|DNA|hAT-Charlie	65320	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA
28.2333-10	chr5	148106739	148107077	+	0.1	NA	intron (NM_006846, intron 16 of 32)	intron (NM_006846, intron 16 of 32)	42928	NM_001127698	11005	Hs.331555	NM_006846	ENSG00000133710	SPINK5	LEKTI|LETKI|NETS|NS|VAKTI	serine peptidase inhibitor, Kazal type 5	protein-coding
36-8	chr6	115367314	115367730	+	0.1	NA	Intergenic	THE1B|LTR|ERVL-MaLR	276313	NR_134602	105377962	Hs.571066	NR_134602		LINC02534	-	long intergenic non-protein coding RNA 2534	ncRNA
8.9-2	chr16	54189404	54189552	+	0.1	NA	Intergenic	Intergenic	81401	NR_126340	100996338	Hs.232014	NR_126340		LINC02169	-	long intergenic non-protein coding RNA 2169	ncRNA
18.9667-11	chr7	1674203	1674454	+	0.1	NA	Intergenic	Intergenic	-13791	NM_001128636	392617	Hs.42896	NM_001128636	ENSG00000225968	ELFN1	PPP1R28	extracellular leucine rich repeat and fibronectin type III domain containing 1	protein-coding
19.7-3	chr11	31991599	31991848	+	0.1	NA	Intergenic	Intergenic	49595	NR_120527	100506675	Hs.446169	NR_120526	ENSG00000254584	LOC100506675	-	uncharacterized LOC100506675	ncRNA
20.8-20	chr8	132996376	132996722	+	0.1	NA	intron (NM_003235, intron 35 of 47)	intron (NM_003235, intron 35 of 47)	50032	NR_107002	102466865		NR_107002	ENSG00000276961	MIR7848	hsa-mir-7848	microRNA 7848	ncRNA
4.3-2	chr2	237175765	237175847	+	0.1	NA	Intergenic	Intergenic	89917	NM_006710	10920	Hs.531713	NM_006710	ENSG00000198612	COPS8	COP9|CSN8|SGN8	COP9 signalosome subunit 8	protein-coding
14.8-8	chr14	82262948	82263260	+	0.1	NA	Intergenic	MER65A|LTR|ERV1	-379528	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
37.2667-5	chr4	48823924	48824417	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-6873	NM_001079840	54940	Hs.518750	NM_017830	ENSG00000109180	OCIAD1	ASRIJ|OCIA|TPA018	OCIA domain containing 1	protein-coding
22.3-9	chr6	27561840	27562201	+	0.1	NA	Intergenic	Intergenic	-88902	NM_001318891	7738	Hs.158174	NM_007149	ENSG00000096654	ZNF184	kr-ZNF3	zinc finger protein 184	protein-coding
23.0667-2	chr10	84248779	84249046	+	0.1	NA	exon (NM_002921, exon 3 of 7)	exon (NM_002921, exon 3 of 7)	3859	NM_001012722	5995	Hs.1544	NM_002921	ENSG00000148604	RGR	RP44	retinal G protein coupled receptor	protein-coding
34.8333-5	chr16	59727178	59727534	+	0.1	NA	Intergenic	Intergenic	27835	NR_028471	644649	Hs.250392	NR_028471		APOOP5	-	apolipoprotein O pseudogene 5	pseudo
23.3667-7	chr18	72689180	72689532	+	0.1	NA	Intergenic	LTR37-int|LTR|ERV1	-145014	NM_182511	147381	Hs.569851	NM_182511	ENSG00000141668	CBLN2	-	cerebellin 2 precursor	protein-coding
32.8667-5	chr5	138486139	138486658	+	0.1	NA	Intergenic	AluSp|SINE|Alu	20919	NM_001964	1958	Hs.326035	NM_001964	ENSG00000120738	EGR1	AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225	early growth response 1	protein-coding
22.7-7	chr6	125500350	125500778	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-173789	NR_038906	643623	Hs.520367	NR_038906	ENSG00000224506	LINC02523	-	long intergenic non-protein coding RNA 2523	ncRNA
17.0667-2	chr14	69358740	69359066	+	0.1	NA	Intergenic	L2c|LINE|L2	39396	NM_004450	2079	Hs.509791	NM_004450	ENSG00000100632	ERH	DROER	ERH mRNA splicing and mitosis factor	protein-coding
17.9-14	chrX	65681513	65681817	+	0.1	NA	intron (NM_002444, intron 1 of 12)	MIR|SINE|MIR	14011	NM_002444	4478	Hs.87752	NM_002444	ENSG00000147065	MSN	HEL70|IMD50	moesin	protein-coding
38.7-9	chr8	124611933	124612507	+	0.1	NA	intron (NM_001282971, intron 3 of 14)	intron (NM_001282971, intron 3 of 14)	73097	NM_005005	4715	Hs.15977	NM_005005	ENSG00000147684	NDUFB9	B22|CI-B22|LYRM3|MC1DN24|UQOR22	NADH:ubiquinone oxidoreductase subunit B9	protein-coding
32.0333-8	chr7	46691269	46691723	+	0.1	NA	intron (NR_134575, intron 2 of 2)	L1M4|LINE|L1	5626	NR_134575	730338	Hs.640207	NR_134575	ENSG00000233539	LOC730338	-	uncharacterized LOC730338	ncRNA
37.9333-7	chr7	78381069	78381624	+	0.1	NA	intron (NM_001301128, intron 6 of 20)	AluSz|SINE|Alu	34104	NR_003680	399670	Hs.568045	NR_003680	ENSG00000231322	RPL13AP17	RPL13A_6_816	ribosomal protein L13a pseudogene 17	pseudo
14.8-10	chr19	30848614	30848811	+	0.1	NA	Intergenic	Intergenic	-318798	NR_147209	107985312	Hs.211053	NR_147209	ENSG00000267777	LINC01791	-	long intergenic non-protein coding RNA 1791	ncRNA
29.7667-6	chr6	128771270	128771743	+	0.1	NA	Intergenic	L1PA15|LINE|L1	-111632	NM_001079823	3908	Hs.200841	NM_000426	ENSG00000196569	LAMA2	LAMM|MDC1A	laminin subunit alpha 2	protein-coding
14.2667-4	chr2	95295600	95295752	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-1671	NM_013434	30818	Hs.437376	NM_013434	ENSG00000115041	KCNIP3	CSEN|DREAM|KCHIP3	potassium voltage-gated channel interacting protein 3	protein-coding
15.6333-16	chr8	84834395	84834591	+	0.1	NA	intron (NM_001287244, intron 3 of 7)	LTR41C|LTR|ERVL	128566	NM_001287244	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
19.0333-2	chr1	176528576	176528970	+	0.1	NA	intron (NM_021936, intron 1 of 4)	L2b|LINE|L2	65598	NM_020318	60676	Hs.187284	NM_020318	ENSG00000116183	PAPPA2	PAPP-A2|PAPP-E|PAPPE|PLAC3	pappalysin 2	protein-coding
17.8-21	chr8	79105225	79105605	+	0.1	NA	Intergenic	Intergenic	-226773	NR_162137	113219456		NR_162137		MIR12123	-	microRNA 12123	ncRNA
27.9-3	chr3	67376536	67376947	+	0.1	NA	intron (NM_003848, intron 10 of 10)	intron (NM_003848, intron 10 of 10)	151277	NR_036234	100422941		NR_036234	ENSG00000283298	MIR4272	-	microRNA 4272	ncRNA
7.03333	chr2	17691198	17691269	+	0.1	NA	intron (NM_024624, intron 22 of 26)	L1MA4A|LINE|L1	62577	NM_001142286	79677	Hs.526728	NM_024624	ENSG00000163029	SMC6	SMC-6|SMC6L1|hSMC6	structural maintenance of chromosomes 6	protein-coding
28.6667	chr1	42340162	42340517	+	0.1	NA	Intergenic	Intergenic	-4459	NM_001198850	22887	Hs.26023	NM_014947	ENSG00000198815	FOXJ3	-	forkhead box J3	protein-coding
16.6-12	chr5	79299229	79299534	+	0.1	NA	intron (NM_152405, intron 4 of 10)	intron (NM_152405, intron 4 of 10)	63250	NM_152405	133746	Hs.482605	NM_152405	ENSG00000152409	JMY	WHAMM2|WHDC1L3	junction mediating and regulatory protein, p53 cofactor	protein-coding
20.4333-9	chr7	33544925	33545312	+	0.1	NA	intron (NM_001362679, intron 21 of 21)	L1PB1|LINE|L1	-359797	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
12.2333-6	chr3	64483034	64483156	+	0.1	NA	Intergenic	Intergenic	-78251	NR_110150	101929335	Hs.476604	NR_110150	ENSG00000241158	ADAMTS9-AS1	-	ADAMTS9 antisense RNA 1	ncRNA
20.0667-4	chr12	44848945	44849319	+	0.1	NA	intron (NM_006159, intron 3 of 20)	intron (NM_006159, intron 3 of 20)	26529	NM_001145109	4753	Hs.505326	NM_006159	ENSG00000184613	NELL2	NRP2	neural EGFL like 2	protein-coding
15.3	chr1	206669983	206670179	+	0.1	NA	Intergenic	Intergenic	-14824	NM_032960	9261	Hs.643566	NM_004759	ENSG00000162889	MAPKAPK2	MAPKAP-K2|MK-2|MK2	MAPK activated protein kinase 2	protein-coding
29.3-10	chr8	112777494	112778198	+	0.1	NA	intron (NM_001363185, intron 11 of 66)	intron (NM_001363185, intron 11 of 66)	134353	NR_031745	100302225		NR_031745	ENSG00000238399	MIR2053	hsa-mir-2053	microRNA 2053	ncRNA
22.2	chr1	157755443	157755800	+	0.1	NA	intron (NM_001159488, intron 7 of 8)	L1ME4b|LINE|L1	21511	NM_030764	79368	Hs.437393	NM_030764	ENSG00000132704	FCRL2	CD307b|FCRH2|IFGP4|IRTA4|SPAP1|SPAP1A|SPAP1B|SPAP1C	Fc receptor like 2	protein-coding
19.1667-7	chr15	51232614	51232940	+	0.1	NA	intron (NM_001347252, intron 3 of 9)	L2a|LINE|L2	-9413	NR_039863	100616369		NR_039863	ENSG00000266593	MIR4713	-	microRNA 4713	ncRNA
28.5667-4	chr16	50677263	50677737	+	0.1	NA	exon (NM_153337, exon 2 of 4)	exon (NM_153337, exon 2 of 4)	3812	NM_153337	124460	Hs.460777	NM_153337	ENSG00000167208	SNX20	SLIC1	sorting nexin 20	protein-coding
14.7333-10	chr6	51213873	51214081	+	0.1	NA	Intergenic	Intergenic	395106	NM_003221	7021	Hs.33102	NM_003221	ENSG00000008196	TFAP2B	AP-2B|AP2-B|PDA2	transcription factor AP-2 beta	protein-coding
11.3333-2	chr3	100436686	100436866	+	0.1	NA	intron (NM_001085451, intron 2 of 3)	MLT1A|LTR|ERVL-MaLR	35237	NM_001085451	348801	Hs.591294	NM_001085451	ENSG00000206535	LNP1	NP3	leukemia NUP98 fusion partner 1	protein-coding
26.9333-8	chr15	97811233	97811652	+	0.1	NA	intron (NR_024172, intron 1 of 2)	MLT1D|LTR|ERVL-MaLR	62987	NR_024172	91948	Hs.130423	NR_024172	ENSG00000251209	LINC00923	-	long intergenic non-protein coding RNA 923	ncRNA
18.6333-8	chr14	73064645	73064986	+	0.1	NA	intron (NM_021239, intron 1 of 18)	intron (NM_021239, intron 1 of 18)	6281	NM_021239	58517	Hs.531106	NM_021239	ENSG00000119707	RBM25	NET52|RED120|RNPC7|S164|Snu71|fSAP94	RNA binding motif protein 25	protein-coding
13.5-8	chr3	159637580	159637752	+	0.1	NA	intron (NM_001197108, intron 1 of 6)	intron (NM_001197108, intron 1 of 6)	130946	NR_121669	100874433	Hs.601476	NR_121669		IQCJ-SCHIP1-AS1	uaz98	IQCJ-SCHIP1 readthrough antisense RNA 1	ncRNA
13.1667-2	chr10	9366981	9367143	+	0.1	NA	Intergenic	MLT1A|LTR|ERVL-MaLR	-71469	NR_120635	101928272	Hs.650697	NR_120635		LOC101928272	-	uncharacterized LOC101928272	ncRNA
29.3-2	chr1	163337843	163338201	+	0.1	NA	exon (NM_031423, exon 7 of 14)	exon (NM_031423, exon 7 of 14)	16068	NM_145697	83540	Hs.651950	NM_031423	ENSG00000143228	NUF2	CDCA1|CT106|NUF2R	NUF2 component of NDC80 kinetochore complex	protein-coding
21.3667-12	chr8	72128470	72128770	+	0.1	NA	Intergenic	MER4D|LTR|ERV1	-53036	NM_007332	8989	Hs.716816	NM_007332	ENSG00000104321	TRPA1	ANKTM1|FEPS|FEPS1	transient receptor potential cation channel subfamily A member 1	protein-coding
24.7333-12	chr8	32286091	32286366	+	0.1	NA	intron (NM_013962, intron 1 of 4)	MLT1H|LTR|ERVL-MaLR	-154518	NR_047475	100874286	Hs.147060	NR_047475	ENSG00000254049	NRG1-IT3	-	NRG1 intronic transcript 3	ncRNA
6.7	chr1	113584663	113584797	+	0.1	NA	intron (NM_001142782, intron 3 of 20)	intron (NM_001142782, intron 3 of 20)	174425	NM_006608	10745	Hs.655824	NM_006608	ENSG00000116793	PHTF1	PHTF	putative homeodomain transcription factor 1	protein-coding
8.76667	chr10	90382826	90382913	+	0.1	NA	Intergenic	HAL1|LINE|L1	157936	NR_110657	101926942	Hs.382666	NR_110657	ENSG00000236373	LINC02653	-	long intergenic non-protein coding RNA 2653	ncRNA
22.7-10	chr8	53804963	53805425	+	0.1	NA	intron (NM_213619, intron 6 of 12)	intron (NM_213619, intron 6 of 12)	37848	NM_213620	51606	Hs.491737	NM_015941	ENSG00000047249	ATP6V1H	CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13	ATPase H+ transporting V1 subunit H	protein-coding
22.3667-7	chr6	49288513	49289034	+	0.1	NA	Intergenic	L1MA6|LINE|L1	174480	NM_000255	4594	Hs.485527	NM_000255	ENSG00000146085	MMUT	MCM|MUT	methylmalonyl-CoA mutase	protein-coding
39.4667-3	chr2	212891588	212892302	+	0.1	NA	Intergenic	Intergenic	-34312	NR_039935	100616267		NR_039935	ENSG00000266354	MIR4776-1	mir-4776-1	microRNA 4776-1	ncRNA
21.6667-8	chr8	131055256	131055688	+	0.1	NA	Intergenic	Intergenic	-14563	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
27.9333-5	chr16	77205197	77205592	+	0.1	NA	intron (NM_001129979, intron 1 of 10)	intron (NM_001129979, intron 1 of 10)	5986	NM_001129979	100130958	Hs.734779	NM_001129979	ENSG00000205078	SYCE1L	MRP2	synaptonemal complex central element protein 1 like	protein-coding
23.4-7	chr4	32180196	32180542	+	0.1	NA	Intergenic	L1M4c|LINE|L1	-157947	NR_134682	105377651	Hs.581935	NR_134682		LOC105377651	-	uncharacterized LOC105377651	ncRNA
42.5667	chr3	187616717	187617301	+	0.1	NA	Intergenic	Intergenic	53385	NM_001048	6750	Hs.12409	NM_001048	ENSG00000157005	SST	SMST	somatostatin	protein-coding
11.1333-2	chr5	96070674	96070847	+	0.1	NA	intron (NR_130776, intron 1 of 4)	L2|LINE|L2	-8378	NR_030309	693168		NR_030309	ENSG00000207578	MIR583	MIRN583|hsa-mir-583	microRNA 583	ncRNA
30.8333-5	chr5	15531980	15532497	+	0.1	NA	intron (NM_001278317, intron 1 of 3)	intron (NM_001278317, intron 1 of 3)	30800	NM_001278317	23194	Hs.433057	NM_012304	ENSG00000183580	FBXL7	FBL6|FBL7	F-box and leucine rich repeat protein 7	protein-coding
30.3333-9	chr8	75322368	75322789	+	0.1	NA	Intergenic	L1MC4a|LINE|L1	-43689	NR_103849	101805492	Hs.571424	NR_103848		CASC9	ESCCAL-1|ESSCAL1|LINC00981|linc-JPH1	cancer susceptibility 9	ncRNA
25.9667-13	chr9	34570406	34570746	+	0.1	NA	intron (NM_001842, intron 1 of 8)	intron (NM_001842, intron 1 of 8)	2564	NR_024369	415056	Hs.734229	NR_024369		CNTFR-AS1	-	CNTFR antisense RNA 1	ncRNA
27.7333-8	chr3	101103071	101103493	+	0.1	NA	Intergenic	Intergenic	-109792	NM_001349330	25890	Hs.477015	NM_015429	ENSG00000154175	ABI3BP	NESHBP|TARSH	ABI family member 3 binding protein	protein-coding
24.8-4	chr1	205121995	205122326	+	0.1	NA	promoter-TSS (NM_005057)	promoter-TSS (NM_005057)	-182	NM_001193272	5929	Hs.519230	NM_005057	ENSG00000117222	RBBP5	RBQ3|SWD1	RB binding protein 5, histone lysine methyltransferase complex subunit	protein-coding
15.7667-8	chr20	62356422	62356684	+	0.1	NA	TTS (NR_109922)	TTS (NR_109922)	3543	NR_109924	101928158	Hs.473256	NR_109922	ENSG00000228812	LAMA5-AS1	-	LAMA5 antisense RNA 1	ncRNA
25.6667-3	chr15	66306409	66306978	+	0.1	NA	intron (NM_001323939, intron 3 of 17)	intron (NM_001323939, intron 3 of 17)	12878	NM_001323944	115752	Hs.446251	NM_133375	ENSG00000166938	DIS3L	DIS3L1	DIS3 like exosome 3'-5' exoribonuclease	protein-coding
50.7667	chr11	80979490	80980150	+	0.1	NA	Intergenic	L2b|LINE|L2	-217017	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
13.8667-2	chr11	26293382	26293616	+	0.1	NA	intron (NM_001313726, intron 1 of 27)	intron (NM_001313726, intron 1 of 27)	-5492	NR_132968	105376599	Hs.125537	NR_132968	ENSG00000254819	ANO3-AS1	-	ANO3 antisense RNA 1	ncRNA
9.63333	chr2	118151553	118151672	+	0.1	NA	Intergenic	L3|LINE|CR1	34774	NR_144530	100506797	Hs.116176	NR_144530	ENSG00000226856	THORLNC	THOR	testis associated oncogenic lncRNA	ncRNA
33.4333	chr10	65014532	65015004	+	0.1	NA	Intergenic	Intergenic	-90250	NR_134456	101928887	Hs.463900	NR_134456	ENSG00000224714	LINC02671	-	long intergenic non-protein coding RNA 2671	ncRNA
20.5333-12	chr5	41407022	41407441	+	0.1	NA	intron (NM_001005473, intron 1 of 2)	intron (NM_001005473, intron 1 of 2)	103370	NM_001005473	345557	Hs.145404	NM_001005473	ENSG00000182836	PLCXD3	-	phosphatidylinositol specific phospholipase C X domain containing 3	protein-coding
23.3-2	chr11	114802157	114802475	+	0.1	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	123789	NM_182495	120406	Hs.446760	NM_182495	ENSG00000204361	NXPE2	FAM55B	neurexophilin and PC-esterase domain family member 2	protein-coding
23.2-11	chr22	27261948	27262241	+	0.1	NA	Intergenic	MIR3|SINE|MIR	-37415	NM_001350812	105372978		NM_001350812		LINC01638	-	long intergenic non-protein coding RNA 1638	protein-coding
17.8333-10	chr7	36852034	36852240	+	0.1	NA	TTS (NM_130442)	TTS (NM_130442)	67295	NR_031604	100302113		NR_031604	ENSG00000221325	MIR1200	MIRN1200|hsa-mir-1200	microRNA 1200	ncRNA
18.7667-3	chr1	203426490	203426677	+	0.1	NA	Intergenic	Intergenic	-49223	NM_002725	5549	Hs.632481	NM_002725	ENSG00000188783	PRELP	MST161|MSTP161|SLRR2A	proline and arginine rich end leucine rich repeat protein	protein-coding
34.4333-2	chr10	122638801	122639281	+	0.1	NA	intron (NM_004406, intron 38 of 39)	MIRb|SINE|MIR	-33841	NM_001364461	112577516		NM_001364461		LOC112577516	-	carbohydrate-binding protein AQN-1-like	protein-coding
15.1667	chr1	110624265	110624435	+	0.1	NA	intron (NM_001204269, intron 1 of 4)	L1ME1|LINE|L1	7090	NM_001204269	3737	Hs.248139	NM_004974	ENSG00000177301	KCNA2	EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2	potassium voltage-gated channel subfamily A member 2	protein-coding
12.8333-5	chr14	61570637	61570803	+	0.1	NA	promoter-TSS (NR_110417)	promoter-TSS (NR_110417)	-67	NR_110416	101927780	Hs.254789	NR_110416	ENSG00000250548	LINC01303	-	long intergenic non-protein coding RNA 1303	ncRNA
19.8667-7	chr2	170241020	170241277	+	0.1	NA	intron (NM_001083615, intron 7 of 33)	intron (NM_001083615, intron 7 of 33)	63001	NM_138995	140469	Hs.671900	NM_138995	ENSG00000071909	MYO3B	-	myosin IIIB	protein-coding
17.9667-4	chr2	38575852	38576188	+	0.1	NA	intron (NM_138394, intron 7 of 12)	intron (NM_138394, intron 7 of 12)	26908	NM_138394	92906	Hs.445497	NM_138394	ENSG00000143889	HNRNPLL	HNRPLL|SRRF	heterogeneous nuclear ribonucleoprotein L like	protein-coding
30.6667-10	chr6	116719175	116719675	+	0.1	NA	intron (NM_001366310, intron 8 of 8)	HAL1|LINE|L1	38214	NM_001366307	3841	Hs.182971	NM_002269	ENSG00000196911	KPNA5	IPOA6|SRP6	karyopherin subunit alpha 5	protein-coding
23.1333-5	chr21	14083967	14084435	+	0.1	NA	Intergenic	CpG	-103757	NR_027270	391267	Hs.364456	NM_153750	ENSG00000215559	ANKRD20A11P	C21orf81	ankyrin repeat domain 20 family member A11, pseudogene	pseudo
27.9667-4	chr14	58218087	58218659	+	0.1	NA	intron (NM_018477, intron 7 of 12)	Charlie7|DNA|hAT-Charlie	18224	NM_018477	55860	Hs.509451	NM_018477	ENSG00000131966	ACTR10	ACTR11|Arp10|Arp11|HARP11	actin related protein 10	protein-coding
17.1667-5	chr14	51871280	51871505	+	0.1	NA	intron (NM_001243774, intron 1 of 2)	intron (NM_001243774, intron 1 of 2)	10780	NM_001243773	54331	Hs.187772	NM_053064	ENSG00000186469	GNG2	-	G protein subunit gamma 2	protein-coding
31.6333	chr12	49423724	49424277	+	0.1	NA	intron (NM_001293285, intron 3 of 14)	AluSz|SINE|Alu	34826	NR_033267	100335030	Hs.687044	NR_033267		LOC100335030	-	FGFR1 oncogene partner 2 pseudogene	pseudo
10.0667-3	chr13	58768221	58768382	+	0.1	NA	Intergenic	Intergenic	-535184	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA
14.5333-3	chr18	8051601	8051918	+	0.1	NA	intron (NM_002845, intron 7 of 30)	L1ME3F|LINE|L1	315275	NR_024419	100192426	Hs.666655	NR_024419	ENSG00000266149	LOC100192426	-	uncharacterized LOC100192426	ncRNA
31.0667-6	chr22	37341092	37341563	+	0.1	NA	intron (NR_110512, intron 2 of 2)	intron (NR_110512, intron 2 of 2)	13512	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA
7.66667	chr2	59012462	59012605	+	0.1	NA	intron (NR_033873, intron 7 of 13)	intron (NR_033873, intron 7 of 13)	-205175	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
17.5333-17	chr8	80311246	80311437	+	0.1	NA	Intergenic	AluSq2|SINE|Alu	69952	NR_049894	100847056		NR_049894	ENSG00000265588	MIR5708	-	microRNA 5708	ncRNA
30.1667-6	chr7	125816199	125816696	+	0.1	NA	Intergenic	MER33|DNA|hAT-Charlie	-552156	NR_110182	101928254	Hs.571236	NR_110182	ENSG00000219445	LOC101928254	-	uncharacterized LOC101928254	ncRNA
27.6-12	chr5	97608413	97608742	+	0.1	NA	intron (NR_105028, intron 2 of 3)	intron (NR_105028, intron 2 of 3)	103881	NR_105028	102546227	Hs.582516	NR_105028	ENSG00000250331	LINC01340	-	long intergenic non-protein coding RNA 1340	ncRNA
33-3	chr14	58805762	58806287	+	0.1	NA	Intergenic	Intergenic	-22264	NR_110547	102723742	Hs.232734	NR_110547	ENSG00000258583	LINC01500	-	long intergenic non-protein coding RNA 1500	ncRNA
27.0333-4	chr10	63473461	63473873	+	0.1	NA	intron (NM_001322258, intron 1 of 24)	intron (NM_001322258, intron 1 of 24)	-7690	NM_001322252	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding
26.7667-9	chr2	78273965	78274503	+	0.1	NA	intron (NR_110288, intron 1 of 3)	intron (NR_110288, intron 1 of 3)	16497	NR_110288	101927967	Hs.406952	NR_110288		LOC101927967	-	uncharacterized LOC101927967	ncRNA
7.36667	chr12	9067987	9068060	+	0.1	NA	TTS (NR_026971)	TTS (NR_026971)	2846	NR_137425	144571	Hs.592432	NR_026971	ENSG00000245105	A2M-AS1	-	A2M antisense RNA 1	ncRNA
16.2333-3	chr19	34810205	34810601	+	0.1	NA	Intergenic	Intergenic	22466	NR_033982	400685	Hs.730118	NR_033982	ENSG00000267767	LINC01801	-	long intergenic non-protein coding RNA 1801	ncRNA
32.3333-13	chr8	144457691	144458422	+	0.1	NA	intron (NM_138496, intron 2 of 4)	intron (NM_138496, intron 2 of 4)	4483	NR_162109	113218512		NR_162109		MIR10400	-	microRNA 10400	ncRNA
20.9333-13	chr3	183896488	183896761	+	0.1	NA	Intergenic	Intergenic	9824	NR_039650	100616127		NR_039650	ENSG00000263932	MIR4448	-	microRNA 4448	ncRNA
32.6-4	chr22	45329529	45330041	+	0.1	NA	intron (NM_001104595, intron 5 of 9)	intron (NM_001104595, intron 5 of 9)	11342	NM_001349913	55007	Hs.265018	NM_017911	ENSG00000100376	FAM118A	C22orf8	family with sequence similarity 118 member A	protein-coding
16.5-9	chr5	65017226	65017559	+	0.1	NA	intron (NM_005869, intron 13 of 13)	intron (NM_005869, intron 13 of 13)	248462	NM_001364478	10283	Hs.371372	NM_005869	ENSG00000153015	CWC27	NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10	CWC27 spliceosome associated cyclophilin	protein-coding
11.3667-7	chr7	35503206	35503416	+	0.1	NA	Intergenic	Intergenic	189456	NR_038864	401324	Hs.377034	NR_038864		LOC401324	-	uncharacterized LOC401324	ncRNA
13.5333-21	chr9	107388594	107388729	+	0.1	NA	Intergenic	AluSz|SINE|Alu	77924	NR_121581	101928720	Hs.125496	NR_121581		LINC01509	PRCAT37	long intergenic non-protein coding RNA 1509	ncRNA
20.2	chr1	68000626	68001089	+	0.1	NA	intron (NR_040077, intron 1 of 9)	MSTA|LTR|ERVL-MaLR	50774	NM_004675	9077	Hs.194695	NM_004675	ENSG00000162595	DIRAS3	ARHI|NOEY2	DIRAS family GTPase 3	protein-coding
23.3-4	chr15	95385463	95385863	+	0.1	NA	Intergenic	L1ME4a|LINE|L1	-47430	NR_027133	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA
15.5667-5	chr17_KI270730v1_random	83073	83327	+	0.1	NA	NA	(GAATG)n|Satellite|Satellite	NA	NA								
29.4333-5	chr2	15906361	15906985	+	0.1	NA	Intergenic	L1ME1|LINE|L1	-13726	NR_125783	103752554	Hs.269571	NR_125783	ENSG00000223850	MYCNUT	MYCNUN|lncUSMycN	MYCN upstream transcript	ncRNA
30.5667	chr13	61747452	61747984	+	0.1	NA	Intergenic	Intergenic	281830	NR_046995	100874143	Hs.552684	NR_046995	ENSG00000229578	LINC00358	-	long intergenic non-protein coding RNA 358	ncRNA
24.1667-6	chr8	78945371	78945767	+	0.1	NA	Intergenic	MLT2C1|LTR|ERVL	108040	NR_157588	112935892		NR_157588		LINC02605	-	long intergenic non-protein coding RNA 2605	ncRNA
10.8333-3	chr18	11455467	11455619	+	0.1	NA	intron (NR_146901, intron 2 of 3)	L2c|LINE|L2	1065	NR_146901	105371994	Hs.640568	NR_146901	ENSG00000267425	LINC01928	-	long intergenic non-protein coding RNA 1928	ncRNA
16.8-11	chr8	104713518	104713849	+	0.1	NA	Intergenic	Intergenic	-124659	NM_001135703	29967	Hs.600630	NM_013437	ENSG00000147650	LRP12	MIG13A|ST7	LDL receptor related protein 12	protein-coding
21.9-10	chr4	169936510	169937039	+	0.1	NA	intron (NR_037878, intron 2 of 4)	MIRb|SINE|MIR	39128	NR_037878	100506085	Hs.649173	NR_037878	ENSG00000248319	LINC02275	-	long intergenic non-protein coding RNA 2275	ncRNA
21.7-10	chr4	86069006	86069500	+	0.1	NA	intron (NM_001318069, intron 9 of 13)	intron (NM_001318069, intron 9 of 13)	-50553	NR_110879	101929064	Hs.662221	NR_110879	ENSG00000250062	LOC101929064	-	uncharacterized LOC101929064	ncRNA
13.0333	chr12	16316544	16316674	+	0.1	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-30533	NM_145792	4257	Hs.389700	NM_020300	ENSG00000008394	MGST1	GST12|MGST|MGST-I	microsomal glutathione S-transferase 1	protein-coding
20.1667-5	chr19	45561799	45562072	+	0.1	NA	intron (NM_025136, intron 1 of 1)	AluSx1|SINE|Alu	22867	NM_025136	80207	Hs.466945	NM_025136	ENSG00000125741	OPA3	MGA3	outer mitochondrial membrane lipid metabolism regulator OPA3	protein-coding
36.0333-5	chr5	129028099	129028843	+	0.1	NA	intron (NM_001017372, intron 8 of 9)	intron (NM_001017372, intron 8 of 9)	62983	NM_001017372	28965	Hs.49765	NM_014031	ENSG00000113396	SLC27A6	ACSVL2|FACVL2|FATP6|VLCS-H1	solute carrier family 27 member 6	protein-coding
30.7667-4	chr14	65143060	65143476	+	0.1	NA	Intergenic	MER58B|DNA|hAT-Charlie	-40573	NR_073137	4149	Hs.285354	NM_002382	ENSG00000125952	MAX	bHLHd4	MYC associated factor X	protein-coding
18.4667-3	chr11	112456962	112457341	+	0.1	NA	Intergenic	Intergenic	-25081	NR_120559	101928823	Hs.126118	NR_120559	ENSG00000254968	LINC02763	-	long intergenic non-protein coding RNA 2763	ncRNA
22.1667-10	chr9	90654179	90654539	+	0.1	NA	Intergenic	L1MCa|LINE|L1	-11535	NM_017594	54769	Hs.165636	NM_017594	ENSG00000165023	DIRAS2	Di-Ras2	DIRAS family GTPase 2	protein-coding
27.5667-2	chr18	49671262	49671567	+	0.1	NA	Intergenic	MIRc|SINE|MIR	109357	NM_006033	9388	Hs.465102	NM_006033	ENSG00000101670	LIPG	EDL|EL|PRO719	lipase G, endothelial type	protein-coding
23.5667-7	chr3	136076640	136077166	+	0.1	NA	intron (NM_181897, intron 5 of 12)	AluY|SINE|Alu	54161	NM_181897	5523	Hs.518155	NM_002718	ENSG00000073711	PPP2R3A	PPP2R3|PR130|PR72	protein phosphatase 2 regulatory subunit B''alpha	protein-coding
15.0333-4	chr10	73880337	73880653	+	0.1	NA	Intergenic	L2a|LINE|L2	-5904	NM_172171	818	Hs.523045	NM_001222	ENSG00000148660	CAMK2G	CAMK|CAMK-II|CAMKG	calcium/calmodulin dependent protein kinase II gamma	protein-coding
18.7333-15	chr3	25958685	25959029	+	0.1	NA	Intergenic	MER5B|DNA|hAT-Charlie	-85162	NR_034055	285326	Hs.145246	NR_034055	ENSG00000230891	LINC00692	-	long intergenic non-protein coding RNA 692	ncRNA
13.5333	chr1	50491883	50492033	+	0.1	NA	intron (NM_007051, intron 15 of 18)	intron (NM_007051, intron 15 of 18)	-68515	NM_032110	63950	Hs.334481	NM_032110	ENSG00000142700	DMRTA2	-	DMRT like family A2	protein-coding
32.1667-8	chr3	110127644	110128088	+	0.1	NA	Intergenic	Tigger2|DNA|TcMar-Tigger	525038	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
15.4-17	chr5	16362934	16363188	+	0.1	NA	Intergenic	LOR1-int|LTR|ERV1	78041	NR_104625	101929505	Hs.639360	NR_104625	ENSG00000248150	LINC02150	-	long intergenic non-protein coding RNA 2150	ncRNA
28.5-12	chr8	32246859	32247279	+	0.1	NA	intron (NM_013962, intron 1 of 4)	L1MA7|LINE|L1	-193677	NR_047475	100874286	Hs.147060	NR_047475	ENSG00000254049	NRG1-IT3	-	NRG1 intronic transcript 3	ncRNA
29.8667-6	chr9	79114744	79115214	+	0.1	NA	Intergenic	MER33|DNA|hAT-Charlie	30687	NR_109771	101927450	Hs.738041	NR_109771	ENSG00000260995	LOC101927450	-	uncharacterized LOC101927450	ncRNA
20.8-6	chr13	32661625	32661895	+	0.1	NA	intron (NM_015032, intron 6 of 34)	L1ME3C|LINE|L1	75308	NM_015032	23047	Hs.744901	NM_015032	ENSG00000083642	PDS5B	APRIN|AS3|CG008	PDS5 cohesin associated factor B	protein-coding
35.5333-11	chr7	3620294	3620836	+	0.1	NA	intron (NM_152744, intron 2 of 44)	AluSq|SINE|Alu	319313	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
30.6333-8	chr4	40117517	40118041	+	0.1	NA	intron (NM_001318359, intron 8 of 18)	intron (NM_001318359, intron 8 of 18)	-60580	NR_027277	344967	Hs.534633	NR_027277	ENSG00000205794	LOC344967	-	acyl-CoA thioesterase 7 pseudogene	pseudo
6.03333	chr14	64396241	64396301	+	0.1	NA	intron (NM_005956, intron 1 of 27)	intron (NM_005956, intron 1 of 27)	7918	NM_005956	4522	Hs.652308	NM_005956	ENSG00000100714	MTHFD1	CIMAH|MTHFC|MTHFD	methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1	protein-coding
19.2333-10	chr3	157980969	157981346	+	0.1	NA	Intergenic	LTR33|LTR|ERVL	125006	NM_003030	6474	Hs.55967	NM_003030	ENSG00000168779	SHOX2	OG12|OG12X|SHOT	short stature homeobox 2	protein-coding
25.2667-11	chr5	55197885	55198294	+	0.1	NA	Intergenic	Intergenic	-24912	NM_001170402	166979	Hs.669184	NM_152623	ENSG00000164287	CDC20B	G6VTS76519	cell division cycle 20B	protein-coding
33.3333-4	chr15	85924229	85924666	+	0.1	NA	Intergenic	MIRb|SINE|MIR	98812	NR_049805	100847084		NR_049805	ENSG00000264406	MIR548AP	-	microRNA 548ap	ncRNA
20.4-6	chr2	54666506	54666809	+	0.1	NA	intron (NM_003128, intron 34 of 35)	intron (NM_003128, intron 34 of 35)	-58355	NM_001039753	400954	Hs.656692	NM_001039753	ENSG00000214595	EML6	-	EMAP like 6	protein-coding
23.2-16	chr5	32226836	32227317	+	0.1	NA	TTS (NM_001040446)	TTS (NM_001040446)	-52757	NM_022130	64083	Hs.408909	NM_022130	ENSG00000113384	GOLPH3	GOPP1|GPP34|MIDAS|Vps74	golgi phosphoprotein 3	protein-coding
23.5667-6	chr2	66277176	66277470	+	0.1	NA	Intergenic	L1MC5a|LINE|L1	81005	NR_039938	100616464		NR_039938	ENSG00000264525	MIR4778	-	microRNA 4778	ncRNA
25.2333-7	chr17	55764742	55765124	+	0.1	NA	intron (NM_001102402, intron 1 of 5)	intron (NM_001102402, intron 1 of 5)	13828	NM_001102402	58488	Hs.285218	NM_021213	ENSG00000141179	PCTP	PC-TP|STARD2	phosphatidylcholine transfer protein	protein-coding
24.6333-6	chr3	191846836	191847220	+	0.1	NA	Intergenic	Intergenic	385865	NM_001083308	152138	Hs.690618	NM_001083308	ENSG00000253548	PYDC2	POP2|cPOP2	pyrin domain containing 2	protein-coding
32.2667-6	chr8	5177140	5177565	+	0.1	NA	Intergenic	L1ME3|LINE|L1	-182438	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding
39.7-9	chr9	33902910	33903488	+	0.1	NA	intron (NM_017811, intron 3 of 4)	intron (NM_017811, intron 3 of 4)	31165	NM_001282530	55833	Hs.493739	NM_018449	ENSG00000137073	UBAP2	UBAP-2	ubiquitin associated protein 2	protein-coding
30.3667-3	chr14	24165212	24165600	+	0.1	NA	intron (NM_006084, intron 7 of 8)	intron (NM_006084, intron 7 of 8)	4141	NM_006084	10379	Hs.1706	NM_006084	ENSG00000213928	IRF9	IRF-9|ISGF3|ISGF3G|p48	interferon regulatory factor 9	protein-coding
43.8667	chr10	78307846	78308467	+	0.1	NA	Intergenic	L1M5|LINE|L1	40814	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA
20.9667-4	chr13	76372620	76372887	+	0.1	NA	Intergenic	Intergenic	-437621	NR_047491	100861545	Hs.638962	NR_047491	ENSG00000261206	LINC00561	-	long intergenic non-protein coding RNA 561	ncRNA
40.1-3	chr5	88240482	88240926	+	0.1	NA	intron (NM_001349403, intron 1 of 10)	intron (NM_001349403, intron 1 of 10)	28141	NM_001289007	153396	Hs.379972	NM_153354	ENSG00000164180	TMEM161B	FLB3342|PRO1313	transmembrane protein 161B	protein-coding
11.4-12	chr7	80917003	80917164	+	0.1	NA	intron (NM_001350120, intron 1 of 17)	intron (NM_001350120, intron 1 of 17)	1968	NM_006379	10512	Hs.269109	NM_006379	ENSG00000075223	SEMA3C	SEMAE|SemE	semaphorin 3C	protein-coding
32.6667-6	chr4	133369511	133369925	+	0.1	NA	Intergenic	Intergenic	220424	NM_020815	57575	Hs.192859	NM_020815	ENSG00000138650	PCDH10	OL-PCDH|PCDH19	protocadherin 10	protein-coding
43.3333-2	chr15	65891853	65892775	+	0.1	NA	TTS (NM_001206836)	TTS (NM_001206836)	22823	NM_004663	8766	Hs.321541	NM_004663	ENSG00000103769	RAB11A	YL8	RAB11A, member RAS oncogene family	protein-coding
38-7	chr5	8131471	8132000	+	0.1	NA	Intergenic	MLT2C1|LTR|ERVL	262587	NR_157171	4552	Hs.481551	NM_002454	ENSG00000124275	MTRR	MSR|cblE	5-methyltetrahydrofolate-homocysteine methyltransferase reductase	protein-coding
17.0667-15	chr5	77642318	77642570	+	0.1	NA	Intergenic	Intergenic	-3747	NM_032109	23440	Hs.202247	NM_032109	ENSG00000171540	OTP	-	orthopedia homeobox	protein-coding
14.1667-2	chr1	232265883	232266123	+	0.1	NA	Intergenic	Intergenic	249605	NM_020808	57568	Hs.745009	NM_020808	ENSG00000116991	SIPA1L2	SPAL2|SPAR2	signal induced proliferation associated 1 like 2	protein-coding
24.8667-3	chr14	53842019	53842380	+	0.1	NA	Intergenic	MER5A|DNA|hAT-Charlie	106285	NR_049843	100847076		NR_049843	ENSG00000266431	MIR5580	-	microRNA 5580	ncRNA
22.1-2	chr1	59507871	59508222	+	0.1	NA	intron (NM_001350794, intron 6 of 14)	intron (NM_001350794, intron 6 of 14)	-7584	NM_001278224	55277	Hs.444301	NM_018291	ENSG00000172456	FGGY	-	FGGY carbohydrate kinase domain containing	protein-coding
15.6333-5	chr12	62675227	62675426	+	0.1	NA	intron (NM_020700, intron 8 of 9)	intron (NM_020700, intron 8 of 9)	71640	NR_029661	406891		NR_029661	ENSG00000199179	MIRLET7I	LET7I|MIRNLET7I|hsa-let-7i|let-7i	microRNA let-7i	ncRNA
20.8333-4	chr11	83845662	83845870	+	0.1	NA	intron (NM_001142699, intron 16 of 27)	MIRb|SINE|MIR	-163341	NM_001142702	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
22.1667-9	chr8	138880225	138880573	+	0.1	NA	intron (NM_152888, intron 2 of 64)	L1ME4a|LINE|L1	33642	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
19.7-9	chr3	173007529	173007828	+	0.1	NA	intron (NM_031955, intron 4 of 10)	intron (NM_031955, intron 4 of 10)	133557	NM_031955	83893	Hs.444236	NM_031955	ENSG00000144962	SPATA16	NYD-SP12|SPGF6	spermatogenesis associated 16	protein-coding
26.7333-2	chr1	84263052	84263579	+	0.1	NA	Intergenic	Intergenic	-35223	NM_001010971	148418	Hs.591445	NM_001010971	ENSG00000203943	SAMD13	HSD-41|HSD-42	sterile alpha motif domain containing 13	protein-coding
18.5333-22	chr8	83109524	83109829	+	0.1	NA	Intergenic	L1PA5|LINE|L1	197572	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
16.4667-10	chr5	148074865	148075029	+	0.1	NA	intron (NM_006846, intron 4 of 32)	L1MEh|LINE|L1	10967	NM_001127698	11005	Hs.331555	NM_006846	ENSG00000133710	SPINK5	LEKTI|LETKI|NETS|NS|VAKTI	serine peptidase inhibitor, Kazal type 5	protein-coding
29.4	chr10	127614256	127614596	+	0.1	NA	Intergenic	L1MEc|LINE|L1	65077	NM_001030013	594857	Hs.643423	NM_001030013	ENSG00000214285	NPS	-	neuropeptide S	protein-coding
19.5667-12	chr8	135506434	135506818	+	0.1	NA	intron (NM_006558, intron 1 of 8)	AluSx4|SINE|Alu	49170	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	KH RNA binding domain containing, signal transduction associated 3	protein-coding
28.5333-8	chr3	192716063	192716498	+	0.1	NA	intron (NM_004113, intron 2 of 5)	intron (NM_004113, intron 2 of 5)	11261	NM_004113	2257	Hs.390250	NM_004113	ENSG00000114279	FGF12	EIEE47|FGF12B|FHF1	fibroblast growth factor 12	protein-coding
29.2333-6	chr4	52948514	52948939	+	0.1	NA	intron (NM_152540, intron 5 of 8)	intron (NM_152540, intron 5 of 8)	86409	NM_023940	65997	Hs.8035	NM_023940	ENSG00000128045	RASL11B	-	RAS like family 11 member B	protein-coding
13.2333-8	chr3	28269707	28269879	+	0.1	NA	intron (NM_182523, intron 2 of 3)	AluSx|SINE|Alu	28174	NM_001331187	152100	Hs.444724	NM_182523	ENSG00000187118	CMC1	C3orf68	C-X9-C motif containing 1	protein-coding
24.5666-7	chrX	28555019	28555607	+	0.1	NA	Intergenic	Intergenic	-32133	NM_014271	11141	Hs.658912	NM_014271	ENSG00000169306	IL1RAPL1	IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2	interleukin 1 receptor accessory protein like 1	protein-coding
18.2667	chr1	61307715	61308004	+	0.1	NA	intron (NM_001134673, intron 3 of 10)	intron (NM_001134673, intron 3 of 10)	-54341	NR_104180	645030	Hs.632410	NR_104180	ENSG00000237853	NFIA-AS1	-	NFIA antisense RNA 1	ncRNA
16.0333-4	chr14	74554378	74554628	+	0.1	NA	intron (NM_000428, intron 4 of 35)	AluJr4|SINE|Alu	57734	NM_000428	4053	Hs.512776	NM_000428	ENSG00000119681	LTBP2	C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3	latent transforming growth factor beta binding protein 2	protein-coding
21.6333-3	chr11	85059641	85059921	+	0.1	NA	intron (NM_001351274, intron 5 of 26)	L1ME3|LINE|L1	-136360	NM_001300983	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
25.5667-5	chr12	32803991	32804359	+	0.1	NA	intron (NM_001005242, intron 9 of 12)	Tigger4|DNA|TcMar-Tigger	-48278	NM_001040436	51067	Hs.505231	NM_015936	ENSG00000139131	YARS2	CGI-04|MLASA2|MT-TYRRS|TYRRS	tyrosyl-tRNA synthetase 2	protein-coding
11.6-2	chr1	234869691	234869857	+	0.1	NA	Intergenic	Intergenic	94225	NR_125945	101927851	Hs.520684	NR_125945	ENSG00000238005	LOC101927851	-	uncharacterized LOC101927851	ncRNA
29.1333-5	chr2	77831949	77832405	+	0.1	NA	intron (NR_110288, intron 3 of 3)	MER50-int|LTR|ERV1	-83757	NR_110286	101927926	Hs.149042	NR_110286	ENSG00000233605	LINC01851	-	long intergenic non-protein coding RNA 1851	ncRNA
19.9333-2	chr1	117310045	117310338	+	0.1	NA	intron (NR_126408, intron 2 of 2)	AluSx|SINE|Alu	14725	NR_126408	104355292	Hs.576446	NR_126408	ENSG00000235202	LINC01525	lnc-MAN1A2-1	long intergenic non-protein coding RNA 1525	ncRNA
17.2333-6	chr20	40947045	40947327	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-33527	NR_145524	100128988	Hs.636443	NR_145524		LOC100128988	-	uncharacterized LOC100128988	ncRNA
20.1333	chr1	43190455	43190862	+	0.1	NA	intron (NM_001195831, intron 6 of 23)	L1MB7|LINE|L1	-18088	NM_001159936	10969	Hs.346868	NM_006824	ENSG00000117395	EBNA1BP2	EBP2|NOBP|P40	EBNA1 binding protein 2	protein-coding
18.4-3	chr15	27819186	27819639	+	0.1	NA	intron (NM_001300984, intron 22 of 22)	intron (NM_001300984, intron 22 of 22)	279903	NM_000275	4948	Hs.654411	NM_000275	ENSG00000104044	OCA2	BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1	OCA2 melanosomal transmembrane protein	protein-coding
23.2667-4	chr11	81542377	81542757	+	0.1	NA	Intergenic	MADE1|DNA|TcMar-Mariner	348269	NR_036186	100422823		NR_036186	ENSG00000264110	MIR4300	-	microRNA 4300	ncRNA
27.7667-5	chr6	148212371	148212815	+	0.1	NA	Intergenic	MER46C|DNA|TcMar-Tigger	-59735	NM_001346505	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	CAPOK|DUH1|SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding
28.1667-3	chr14	55981632	55981983	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-136604	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding
10.2-9	chr8	132635194	132635331	+	0.1	NA	intron (NR_073525, intron 4 of 12)	intron (NR_073525, intron 4 of 12)	40283	NR_135905	23639	Hs.591865	NM_012472	ENSG00000129295	LRRC6	CILD19|LRTP|TSLRP	leucine rich repeat containing 6	protein-coding
10.3	chr1	2302034	2302258	+	0.1	NA	intron (NM_003036, intron 1 of 6)	intron (NM_003036, intron 1 of 6)	50515	NR_024489	100129534	Hs.655313	NM_001127577	ENSG00000269896	LOC100129534	-	small nuclear ribonucleoprotein polypeptide N pseudogene	pseudo
42.8667-3	chr5	34760585	34761419	+	0.1	NA	intron (NM_015577, intron 3 of 17)	L1MB5|LINE|L1	73443	NM_001145523	26064	Hs.431400	NM_015577	ENSG00000039560	RAI14	NORPEG|RAI13	retinoic acid induced 14	protein-coding
19.2333-3	chr10	63984957	63985419	+	0.1	NA	Intergenic	MSTB|LTR|ERVL-MaLR	-463298	NM_001322258	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding
30.8667-7	chr6	167219703	167220104	+	0.1	NA	Intergenic	L2a|LINE|L2	-8397	NR_157263	112590798		NR_157263		HPAT5	-	human pluripotency-associated transcript 5	ncRNA
6.46667-2	chr2	12376117	12376181	+	0.1	NA	intron (NR_110196, intron 4 of 5)	L1MC4|LINE|L1	177019	NR_037452	100500884		NR_037452	ENSG00000264089	MIR3681	-	microRNA 3681	ncRNA
31.2667-2	chr12	87391538	87392111	+	0.1	NA	Intergenic	MIR|SINE|MIR	61085	NR_135020	105369879	Hs.552351	NR_135020		LOC105369879	-	uncharacterized LOC105369879	ncRNA
34.1-2	chr2	160805341	160805809	+	0.1	NA	Intergenic	L1M4b|LINE|L1	-311768	NM_002897	5937	Hs.470412	NM_002897	ENSG00000153250	RBMS1	C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1	RNA binding motif single stranded interacting protein 1	protein-coding
25.9-2	chr10	28652280	28652609	+	0.1	NA	Intergenic	Intergenic	-25077	NM_012342	25805	Hs.533336	NM_012342	ENSG00000095739	BAMBI	NMA	BMP and activin membrane bound inhibitor	protein-coding
23.2333-6	chr4	29981352	29981688	+	0.1	NA	Intergenic	L2c|LINE|L2	-738849	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
28.1667-4	chr5	16038109	16038572	+	0.1	NA	Intergenic	Intergenic	103158	NR_030616	100126347		NR_030616	ENSG00000216077	MIR887	MIRN887|hsa-mir-887	microRNA 887	ncRNA
15.9667-2	chr10	61445859	61446105	+	0.1	NA	intron (NR_134508, intron 1 of 6)	intron (NR_134508, intron 1 of 6)	-6657	NR_120643	101928781	Hs.568856	NR_120643		TMEM26-AS1	-	TMEM26 antisense RNA 1	ncRNA
26.1-8	chr2	36124857	36125438	+	0.1	NA	Intergenic	Charlie9|DNA|hAT-Charlie	230423	NR_037631	100288911	Hs.432924	NR_037631		CRIM1-DT	-	CRIM1 divergent transcript	ncRNA
14.3-11	chr5	31719488	31719672	+	0.1	NA	intron (NM_178140, intron 1 of 24)	intron (NM_178140, intron 1 of 24)	80449	NM_178140	23037	Hs.481819	NM_015022	ENSG00000133401	PDZD2	AIPC|PAPIN|PDZK3|PIN1	PDZ domain containing 2	protein-coding
32.9333-3	chr16	19001567	19001964	+	0.1	NA	intron (NM_001160364, intron 1 of 15)	intron (NM_001160364, intron 1 of 15)	17478	NM_001160364	79905	Hs.187377	NM_024847	ENSG00000170537	TMC7	-	transmembrane channel like 7	protein-coding
16.4333	chr1	238159403	238159722	+	0.1	NA	Intergenic	L1MA2|LINE|L1	-268640	NM_021186	57829	Hs.136241	NM_021186	ENSG00000116996	ZP4	ZBP|ZP1|ZPB|Zp-4	zona pellucida glycoprotein 4	protein-coding
26.4667-5	chr3	82266116	82266455	+	0.1	NA	intron (NR_147146, intron 3 of 8)	intron (NR_147146, intron 3 of 8)	280143	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
20.1667-2	chr11	13434142	13434558	+	0.1	NA	intron (NM_001297741, intron 1 of 7)	L2a|LINE|L2	5929	NM_001297742	84280	Hs.332382	NM_032320	ENSG00000148925	BTBD10	GMRP-1|GMRP1	BTB domain containing 10	protein-coding
38.5667	chr13	113509488	113510061	+	0.1	NA	intron (NM_001349746, intron 6 of 10)	intron (NM_001349746, intron 6 of 10)	18753	NM_017905	55002	Hs.317593	NM_017905	ENSG00000150403	TMCO3	C13orf11	transmembrane and coiled-coil domains 3	protein-coding
29.4333-7	chr21	19265165	19265517	+	0.1	NA	Intergenic	Intergenic	-505529	NR_109925	101927797	Hs.551743	NR_109925		MIR548XHG	-	MIR548X host gene	ncRNA
41.6	chr14	46568892	46569550	+	0.1	NA	Intergenic	L1PA13|LINE|L1	82560	NM_080746	140801	Hs.308332	NM_080746	ENSG00000165496	RPL10L	RPL10_5_1358	ribosomal protein L10 like	protein-coding
10.5-2	chr1	110115542	110115744	+	0.1	NA	Intergenic	Intergenic	3200	NM_203412	164153	Hs.374027	NM_203412	ENSG00000186150	UBL4B	-	ubiquitin like 4B	protein-coding
12.3333-3	chr11	93020803	93021074	+	0.1	NA	Intergenic	Intergenic	51315	NM_005959	4544	Hs.569039	NM_005959	ENSG00000134640	MTNR1B	FGQTL2|MEL-1B-R|MT2	melatonin receptor 1B	protein-coding
40.6333	chr1	31289451	31289928	+	0.1	NA	intron (NM_004814, intron 3 of 9)	intron (NM_004814, intron 3 of 9)	7099	NM_004814	9410	Hs.33962	NM_004814	ENSG00000060688	SNRNP40	40K|HPRP8BP|PRP8BP|PRPF8BP|SPF38|WDR57	small nuclear ribonucleoprotein U5 subunit 40	protein-coding
49.6333-2	chr15	83914790	83915676	+	0.1	NA	intron (NM_207517, intron 16 of 29)	intron (NM_207517, intron 16 of 29)	-164954	NR_036652	648809	Hs.585157	NR_036652		EFL1P1	EFTUD1P1|FAM42B|HsT19321	elongation factor like GTPase 1 pseudogene 1	pseudo
12.9667-3	chr11	20158347	20158620	+	0.1	NA	intron (NM_001029865, intron 2 of 3)	intron (NM_001029865, intron 2 of 3)	1992	NM_001029865	120237		NM_001029865	ENSG00000109851	DBX1	-	developing brain homeobox 1	protein-coding
28.3333-14	chr8	131051622	131052062	+	0.1	NA	Intergenic	Intergenic	-10933	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
32.8333-5	chr2	58126584	58127074	+	0.1	NA	intron (NM_001130483, intron 8 of 13)	intron (NM_001130483, intron 8 of 13)	80117	NM_001130481	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
20.9333-7	chr17	82334648	82334895	+	0.1	NA	Intergenic	Intergenic	-1005	NM_003004	6398	Hs.558009	NM_003004	ENSG00000141574	SECTM1	K12|SECTM	secreted and transmembrane 1	protein-coding
7.06666-4	chr5	36033085	36033214	+	0.1	NA	Intergenic	MER70-int|LTR|ERVL	-32127	NM_001171873	133688	Hs.254699	NM_152404	ENSG00000145626	UGT3A1	-	UDP glycosyltransferase family 3 member A1	protein-coding
31.1-9	chr20	55075383	55075837	+	0.1	NA	Intergenic	Intergenic	-347433	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA
25.5333-13	chr7	15419824	15420145	+	0.1	NA	intron (NM_001004320, intron 4 of 12)	intron (NM_001004320, intron 4 of 12)	142031	NM_001004320	392636	Hs.670634	NM_001004320	ENSG00000187546	AGMO	TMEM195	alkylglycerol monooxygenase	protein-coding
25.2667-3	chr13	54262921	54263287	+	0.1	NA	Intergenic	L2a|LINE|L2	48944	NR_031628	100302187		NR_031628	ENSG00000283126	MIR1297	MIRN1297|hsa-mir-1297|mir-1297	microRNA 1297	ncRNA
33.2333	chr1	45198557	45199130	+	0.1	NA	intron (NM_020883, intron 1 of 13)	HSMAR2|DNA|TcMar-Mariner	7762	NM_020883	57643	Hs.656613	NM_020883	ENSG00000162415	ZSWIM5	-	zinc finger SWIM-type containing 5	protein-coding
16.6667-13	chr5	45899100	45899377	+	0.1	NA	Intergenic	L1ME1|LINE|L1	-202858	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
28.9-8	chr3	30741354	30741830	+	0.1	NA	intron (NM_207359, intron 14 of 14)	intron (NM_207359, intron 14 of 14)	134991	NM_003242	7048	Hs.82028	NM_003242	ENSG00000163513	TGFBR2	AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII	transforming growth factor beta receptor 2	protein-coding
18.3667-15	chr9	27646923	27647139	+	0.1	NA	Intergenic	L1PA8A|LINE|L1	-73165	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
44.1-3	chr4	107712888	107713444	+	0.1	NA	intron (NM_005443, intron 1 of 11)	AluSx3|SINE|Alu	7068	NM_005443	9061	Hs.368610	NM_005443	ENSG00000138801	PAPSS1	ATPSK1|PAPSS|SK1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	protein-coding
18-12	chr3	185741063	185741358	+	0.1	NA	intron (NR_138486, intron 2 of 15)	intron (NR_138486, intron 2 of 15)	26694	NR_049838	100847078		NR_049838	ENSG00000265470	MIR548AQ	-	microRNA 548aq	ncRNA
32.6667-3	chr12	80090274	80090829	+	0.1	NA	Intergenic	L1PB4|LINE|L1	-8986	NM_001368062	283310	Hs.723594	NM_173591	ENSG00000165899	OTOGL	C12orf64|DFNB84B	otogelin like	protein-coding
9.76666-2	chr5	136099726	136099902	+	0.1	NA	Intergenic	Intergenic	-19216	NR_030583	100126299		NR_030583	ENSG00000278815	VTRNA2-1	CBL-3|CBL3|MIR886|MIRN886|VTRNA2|hsa-mir-886|hvg-5|nc886|pre-miR-886|svtRNA2-1a	vault RNA 2-1	ncRNA
16.4-2	chr1	183108787	183108984	+	0.1	NA	intron (NM_002293, intron 3 of 27)	intron (NM_002293, intron 3 of 27)	32385	NR_149048	110841583	Hs.604063	NR_149048	ENSG00000224468	LAMC1-AS1	lnc-LAMC2-1:1	LAMC1 antisense RNA 1	ncRNA
10.3333-2	chr18	2088581	2088685	+	0.1	NA	Intergenic	HAL1|LINE|L1	482872	NM_022840	64863	Hs.126888	NM_022840	ENSG00000101574	METTL4	HsT661	methyltransferase like 4	protein-coding
25.8333	chr1	216757145	216757715	+	0.1	NA	intron (NM_001243513, intron 1 of 7)	intron (NM_001243513, intron 1 of 7)	-33958	NM_001243519	2104	Hs.444225	NM_001438	ENSG00000196482	ESRRG	ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3	estrogen related receptor gamma	protein-coding
28	chr10	43250082	43250589	+	0.1	NA	intron (NM_145313, intron 1 of 12)	intron (NM_145313, intron 1 of 12)	16730	NM_145313	221002	Hs.125293	NM_145313	ENSG00000198915	RASGEF1A	CG4853	RasGEF domain family member 1A	protein-coding
46.6333-3	chr7	61959381	61960202	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	1344265	NR_003952	643955	Hs.583308	NR_003952	ENSG00000185037	ZNF733P	ZNF733	zinc finger protein 733, pseudogene	pseudo
19.4333-7	chr3	66221604	66221860	+	0.1	NA	intron (NM_001350992, intron 1 of 8)	intron (NM_001350992, intron 1 of 8)	729	NM_001350991	115286	Hs.379386	NM_173471	ENSG00000144741	SLC25A26	COXPD28|SAMC	solute carrier family 25 member 26	protein-coding
30.6667	chr10	70183773	70184175	+	0.1	NA	Intergenic	Intergenic	-13460	NM_020150	56681	Hs.499960	NM_020150	ENSG00000079332	SAR1A	SAR1|SARA1|Sara|masra2	secretion associated Ras related GTPase 1A	protein-coding
18.5667-13	chr8	103767185	103767371	+	0.1	NA	intron (NM_001348497, intron 3 of 22)	AluSc|SINE|Alu	-51942	NM_001348503	9699	Hs.655271	NM_014677	ENSG00000176406	RIMS2	OBOE|RAB3IP3|RIM2	regulating synaptic membrane exocytosis 2	protein-coding
33.5667-4	chr18	8374913	8375403	+	0.1	NA	intron (NM_002845, intron 22 of 30)	intron (NM_002845, intron 22 of 30)	-8124	NR_024419	100192426	Hs.666655	NR_024419	ENSG00000266149	LOC100192426	-	uncharacterized LOC100192426	ncRNA
16.3-11	chr5	6695763	6695954	+	0.1	NA	intron (NR_103771, intron 2 of 2)	L1ME3G|LINE|L1	11853	NR_103771	100505625	Hs.550028	NR_103771	ENSG00000248677	LINC02102	-	long intergenic non-protein coding RNA 2102	ncRNA
22.2333-2	chr10	120114551	120114885	+	0.1	NA	Intergenic	Intergenic	156205	NR_039830	100616322		NR_039830	ENSG00000265370	MIR4682	-	microRNA 4682	ncRNA
30.8667-5	chr4	158890265	158890678	+	0.1	NA	intron (NM_001346043, intron 13 of 15)	intron (NM_001346043, intron 13 of 15)	84632	NM_001323916	57600	Hs.652441	NM_020840	ENSG00000052795	FNIP2	FNIPL|MAPO1	folliculin interacting protein 2	protein-coding
14.8667-11	chr6	130719463	130719766	+	0.1	NA	Intergenic	(GAAT)n|Simple_repeat|Simple_repeat	-107791	NM_001195597	100507203	Hs.388715	NM_001195597	ENSG00000256162	SMLR1	-	small leucine rich protein 1	protein-coding
21.1667-2	chr10	91296890	91297360	+	0.1	NA	Intergenic	L1MA3|LINE|L1	76462	NM_032373	84333	Hs.500512	NM_032373	ENSG00000180628	PCGF5	RNF159	polycomb group ring finger 5	protein-coding
21.2667-5	chr6	43145521	43145824	+	0.1	NA	intron (NM_152882, intron 15 of 18)	intron (NM_152882, intron 15 of 18)	-25597	NM_003131	6722	Hs.520140	NM_003131	ENSG00000112658	SRF	MCM1	serum response factor	protein-coding
35.4667-10	chr4	95626053	95626568	+	0.1	NA	Intergenic	L2a|LINE|L2	-77337	NM_003728	8633	Hs.388565	NM_003728	ENSG00000182168	UNC5C	UNC5H3	unc-5 netrin receptor C	protein-coding
15.7667-13	chr8	99380541	99380831	+	0.1	NA	intron (NM_017890, intron 19 of 61)	intron (NM_017890, intron 19 of 61)	156044	NR_030329	693184		NR_030329	ENSG00000207804	MIR599	MIRN599|hsa-mir-599	microRNA 599	ncRNA
17.3333-3	chr12	116705789	116706043	+	0.1	NA	Intergenic	L1ME4a|LINE|L1	32153	NM_001353623	79794	Hs.120170	NM_024738	ENSG00000111412	C12orf49	-	chromosome 12 open reading frame 49	protein-coding
40.4333	chr1	77357469	77357975	+	0.1	NA	intron (NM_012093, intron 6 of 13)	intron (NM_012093, intron 6 of 13)	74635	NM_012093	26289	Hs.559718	NM_012093	ENSG00000154027	AK5	AK6	adenylate kinase 5	protein-coding
21.6-2	chr10	124177327	124177624	+	0.1	NA	Intergenic	Intergenic	-83877	NM_001270765	51363	Hs.287537	NM_014863	ENSG00000182022	CHST15	BRAG|GALNAC4S-6ST	carbohydrate sulfotransferase 15	protein-coding
21.2333-9	chr20	17543184	17543526	+	0.1	NA	intron (NM_001278606, intron 1 of 8)	intron (NM_001278606, intron 1 of 8)	-11976	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding
23.5333-2	chr1	116497885	116498316	+	0.1	NA	Intergenic	Intergenic	-19274	NR_125973	101929023	Hs.668091	NR_125972	ENSG00000233154	LINC01762	-	long intergenic non-protein coding RNA 1762	ncRNA
43.9333-5	chr22	24861811	24862370	+	0.1	NA	intron (NM_001098498, intron 9 of 23)	AluSp|SINE|Alu	55869	NM_133454	129049	Hs.474397	NM_133454	ENSG00000167037	SGSM1	RUTBC2	small G protein signaling modulator 1	protein-coding
11.6333-2	chr2	82360623	82360855	+	0.1	NA	Intergenic	L1MA9|LINE|L1	-496064	NR_033423	1720	Hs.169235	NR_033423		DHFRP3	-	dihydrofolate reductase pseudogene 3	pseudo
25.5333-4	chr18	40127689	40128196	+	0.1	NA	Intergenic	L1M7|LINE|L1	61656	NR_110791	101927900	Hs.385522	NR_110791	ENSG00000261715	LINC01477	-	long intergenic non-protein coding RNA 1477	ncRNA
25.3-7	chr18	56720904	56721276	+	0.1	NA	intron (NM_015285, intron 13 of 27)	intron (NM_015285, intron 13 of 27)	69705	NM_015285	23335	Hs.465213	NM_015285	ENSG00000091157	WDR7	TRAG	WD repeat domain 7	protein-coding
25.7-3	chr10	77509219	77509516	+	0.1	NA	intron (NM_001271519, intron 1 of 28)	AluSx|SINE|Alu	128441	NM_001161352	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding
18.7333-19	chr6	101863397	101863837	+	0.1	NA	intron (NM_001166247, intron 10 of 16)	intron (NM_001166247, intron 10 of 16)	464632	NM_001166247	2898	Hs.98262	NM_021956	ENSG00000164418	GRIK2	EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6	glutamate ionotropic receptor kainate type subunit 2	protein-coding
29.6667-7	chr7	145726204	145726811	+	0.1	NA	Intergenic	L3|LINE|CR1	-890454	NM_001350894	27010	Hs.660232	NM_022445	ENSG00000196511	TPK1	HTPK1|PP20|THMD5	thiamin pyrophosphokinase 1	protein-coding
14.8667-4	chr12	121644491	121644758	+	0.1	NA	Intergenic	AluJr4|SINE|Alu	18074	NM_032790	84876	Hs.55148	NM_032790		ORAI1	CRACM1|IMD9|ORAT1|TAM2|TMEM142A	ORAI calcium release-activated calcium modulator 1	protein-coding
22.8-5	chr12	54354015	54354342	+	0.1	NA	intron (NR_120487, intron 1 of 3)	AluJb|SINE|Alu	487	NR_120487	102724050	Hs.670941	NR_120486	ENSG00000258137	LOC102724050	-	uncharacterized LOC102724050	ncRNA
12.9667-2	chr1	98848866	98849042	+	0.1	NA	Intergenic	L1PA15|LINE|L1	-155322	NR_033940	100129620	Hs.588631	NR_033940	ENSG00000232825	LOC100129620	-	uncharacterized LOC100129620	ncRNA
25.1-8	chr2	70699642	70700004	+	0.1	NA	intron (NM_017482, intron 4 of 12)	L1ME4a|LINE|L1	67892	NM_001185054	119	Hs.66187	NM_001617	ENSG00000075340	ADD2	ADDB	adducin 2	protein-coding
10.7667-2	chr16	71264588	71264756	+	0.1	NA	Intergenic	Intergenic	24730	NM_001324378	55783	Hs.72782	NM_018348	ENSG00000180917	CMTR2	AFT|FTSJD1|HMTr2|MTr2	cap methyltransferase 2	protein-coding
25.9-13	chr9	121998322	121998716	+	0.1	NA	intron (NM_194252, intron 3 of 3)	AluSx1|SINE|Alu	95087	NM_194252	158135	Hs.438937	NM_194252	ENSG00000175764	TTLL11	C9orf20|bA244O19.1	tubulin tyrosine ligase like 11	protein-coding
13.4333-2	chr14	69636422	69636581	+	0.1	NA	intron (NM_014734, intron 1 of 5)	intron (NM_014734, intron 1 of 5)	24905	NM_014734	9766	Hs.440025	NM_014734	ENSG00000100647	SUSD6	DRAGO|KIAA0247	sushi domain containing 6	protein-coding
22.1667-7	chr7	3094895	3095253	+	0.1	NA	Intergenic	Intergenic	-51207	NM_032415	84433	Hs.648101	NM_032415	ENSG00000198286	CARD11	BENTA|BIMP3|CARMA1|IMD11|IMD11A|PPBL	caspase recruitment domain family member 11	protein-coding
20.3333-4	chr10	63847114	63847317	+	0.1	NA	Intergenic	L1M1|LINE|L1	-325325	NM_001322258	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding
42.3667	chr1	113961761	113962398	+	0.1	NA	intron (NM_198268, intron 8 of 15)	intron (NM_198268, intron 8 of 15)	8202	NM_181358	204851	Hs.532363	NM_152696	ENSG00000163349	HIPK1	Myak|Nbak2	homeodomain interacting protein kinase 1	protein-coding
7.06666-5	chr6	61857601	61857712	+	0.1	NA	intron (NM_001350622, intron 6 of 9)	intron (NM_001350622, intron 6 of 9)	283526	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
39.0333-2	chr17	66495072	66495599	+	0.1	NA	intron (NM_002737, intron 2 of 16)	intron (NM_002737, intron 2 of 16)	-78481	NR_110822	101928001	Hs.650730	NR_110822		PRKCA-AS1	-	PRKCA antisense RNA 1	ncRNA
17.0667-3	chr15	43401400	43401613	+	0.1	NA	intron (NM_014444, intron 14 of 17)	intron (NM_014444, intron 14 of 17)	30405	NM_001286414	27229	Hs.584887	NM_014444	ENSG00000137822	TUBGCP4	76P|GCP-4|GCP4|Grip76|MCCRP3	tubulin gamma complex associated protein 4	protein-coding
55.7333-4	chr7	36020109	36021032	+	0.1	NA	Intergenic	Intergenic	-74740	NR_108089	101928618	Hs.561704	NR_108089	ENSG00000261184	LOC101928618	-	uncharacterized LOC101928618	ncRNA
17.1-9	chr15	48042093	48042517	+	0.1	NA	Intergenic	Intergenic	-78685	NM_205850	283652	Hs.710240	NM_205850	ENSG00000188467	SLC24A5	JSX|NCKX5|OCA6|SHEP4	solute carrier family 24 member 5	protein-coding
26.2-16	chr3	134191027	134191436	+	0.1	NA	intron (NM_001005861, intron 8 of 14)	intron (NM_001005861, intron 8 of 14)	59513	NM_002958	6259	Hs.654562	NM_002958	ENSG00000163785	RYK	D3S3195|JTK5|JTK5A|RYK1	receptor like tyrosine kinase	protein-coding
10.5-5	chr4	72977558	72977712	+	0.1	NA	Intergenic	Intergenic	92081	NM_001297732	285521	Hs.356697	NM_173827	ENSG00000163626	COX18	COX18HS	cytochrome c oxidase assembly factor COX18	protein-coding
38.0667-3	chr22	40867073	40867582	+	0.1	NA	intron (NM_022098, intron 1 of 9)	intron (NM_022098, intron 1 of 9)	-5214	NM_145174	150353	Hs.585042	NM_145174	ENSG00000172404	DNAJB7	DJ5|HSC3	DnaJ heat shock protein family (Hsp40) member B7	protein-coding
32.1	chr10	119713364	119714001	+	0.1	NA	Intergenic	AluSz6|SINE|Alu	-12365	NM_001243195	22876	Hs.369755	NM_014937	ENSG00000198825	INPP5F	MSTP007|MSTPO47|SAC2|hSAC2	inositol polyphosphate-5-phosphatase F	protein-coding
14.3-3	chr10	109440439	109440729	+	0.1	NA	Intergenic	L1MEc|LINE|L1	482662	NM_001324136	7511	Hs.390623	NM_020383	ENSG00000108039	XPNPEP1	APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1	X-prolyl aminopeptidase 1	protein-coding
33.1667-3	chr15	101023127	101023573	+	0.1	NA	intron (NM_024652, intron 15 of 33)	intron (NM_024652, intron 15 of 33)	103993	NM_024652	79705	Hs.407918	NM_024652	ENSG00000154237	LRRK1	RIPK6|Roco1	leucine rich repeat kinase 1	protein-coding
29.5333-7	chr8	63282472	63282823	+	0.1	NA	Intergenic	HSMAR2|DNA|TcMar-Mariner	113644	NM_001277814	253943	Hs.491861	NM_152758	ENSG00000185728	YTHDF3	-	YTH N6-methyladenosine RNA binding protein 3	protein-coding
19.1333-10	chr6	19971699	19971939	+	0.1	NA	Intergenic	LTR33|LTR|ERVL	134449	NM_001546	3400	Hs.519601	NM_001546	ENSG00000172201	ID4	IDB4|bHLHb27	inhibitor of DNA binding 4, HLH protein	protein-coding
38.6-7	chr20	54061875	54062572	+	0.1	NA	intron (NM_001366297, intron 1 of 8)	intron (NM_001366297, intron 1 of 8)	-3203	NM_001323347	8537	Hs.400556	NM_003657	ENSG00000064787	BCAS1	AIBC1|NABC1	breast carcinoma amplified sequence 1	protein-coding
19.2667-10	chr6	122409281	122409556	+	0.1	NA	intron (NM_004506, intron 1 of 12)	L2|LINE|L2	9766	NM_004506	3298	Hs.158195	NM_004506	ENSG00000025156	HSF2	HSF 2|HSTF 2	heat shock transcription factor 2	protein-coding
28-2	chr10	81040990	81041642	+	0.1	NA	Intergenic	Intergenic	391519	NR_155749	105378386	Hs.531456	NR_155749		LINC02655	-	long intergenic non-protein coding RNA 2655	ncRNA
10.1	chr12	15968081	15968183	+	0.1	NA	intron (NM_001300779, intron 5 of 7)	intron (NM_001300779, intron 5 of 7)	56800	NM_015954	51071	Hs.39429	NM_015954	ENSG00000023697	DERA	CGI-26|DEOC	deoxyribose-phosphate aldolase	protein-coding
43.2333	chr10	93551734	93552294	+	0.1	NA	Intergenic	L1ME4a|LINE|L1	-14651	NM_001195755	338557	Hs.661022	NM_181745	ENSG00000186188	FFAR4	BMIQ10|GPR120|GPR129|GT01|O3FAR1|PGR4	free fatty acid receptor 4	protein-coding
14.5667-4	chr2	18060102	18060344	+	0.1	NA	Intergenic	Intergenic	181556	NM_002252	3790	Hs.414489	NM_002252	ENSG00000170745	KCNS3	KV9.3	potassium voltage-gated channel modifier subfamily S member 3	protein-coding
23.7667-3	chr1	245158018	245158558	+	0.1	NA	intron (NM_018012, intron 2 of 14)	intron (NM_018012, intron 2 of 14)	3303	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding
39.1667	chr1	189024607	189024998	+	0.1	NA	Intergenic	Intergenic	1451208	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
24.3	chr1	113965050	113965611	+	0.1	NA	intron (NM_001369807, intron 10 of 15)	intron (NM_001369807, intron 10 of 15)	11453	NM_181358	204851	Hs.532363	NM_152696	ENSG00000163349	HIPK1	Myak|Nbak2	homeodomain interacting protein kinase 1	protein-coding
25.4333-5	chr16	50644917	50645219	+	0.1	NA	3' UTR (NM_033119, exon 10 of 10)	3' UTR (NM_033119, exon 10 of 10)	-23787	NR_110908	101927272	Hs.460777	NR_110908	ENSG00000260249	LOC101927272	-	uncharacterized LOC101927272	ncRNA
31.7333-2	chr12	122019582	122019961	+	0.1	NA	Intergenic	L1MB5|LINE|L1	-2113	NM_020993	605	Hs.530970	NM_020993	ENSG00000110987	BCL7A	BCL7	BAF chromatin remodeling complex subunit BCL7A	protein-coding
12.8333-9	chr3	136167389	136167554	+	0.1	NA	intron (NM_018133, intron 1 of 1)	intron (NM_018133, intron 1 of 1)	26997	NM_001145417	55167	Hs.18631	NM_018133	ENSG00000174579	MSL2	MSL-2|MSL2L1|RNF184	MSL complex subunit 2	protein-coding
39.7-8	chr5	98889181	98889808	+	0.1	NA	intron (NM_001364113, intron 15 of 36)	intron (NM_001364113, intron 15 of 36)	37040	NM_001270	1105	Hs.643465	NM_001270	ENSG00000153922	CHD1	CHD-1|PILBOS	chromodomain helicase DNA binding protein 1	protein-coding
9.23333-2	chr3	86355689	86355781	+	0.1	NA	Intergenic	L1MA8|LINE|L1	-126208	NR_135563	101927494	Hs.385622	NR_135563	ENSG00000241328	LINC02070	-	long intergenic non-protein coding RNA 2070	ncRNA
27.0667-4	chr14	66491380	66491703	+	0.1	NA	intron (NM_001351576, intron 6 of 9)	intron (NM_001351576, intron 6 of 9)	5170	NR_110308	440184	Hs.412138	NM_001004331	ENSG00000196553	CCDC196	C14orf53|LINC00238|NCRNA00238	coiled-coil domain containing 196	protein-coding
29.8333-5	chr4	31247225	31247746	+	0.1	NA	Intergenic	L1M3f|LINE|L1	76341	NR_125935	102723778	Hs.210739	NR_125935	ENSG00000251182	LINC02497	-	long intergenic non-protein coding RNA 2497	ncRNA
30.7667-9	chr3	104002688	104002995	+	0.1	NA	Intergenic	L1MD|LINE|L1	-478725	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
31-3	chr16	11906650	11907082	+	0.1	NA	intron (NM_001130007, intron 1 of 14)	intron (NM_001130007, intron 1 of 14)	9090	NM_001130006	2935	Hs.528780	NM_002094	ENSG00000103342	GSPT1	551G9.2|ETF3A|GST1|eRF3a	G1 to S phase transition 1	protein-coding
36.2333-2	chr8	111797692	111798246	+	0.1	NA	Intergenic	ERVL-E-int|LTR|ERVL	421330	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
28.8-12	chr7	3640674	3641079	+	0.1	NA	intron (NM_152744, intron 3 of 44)	AluSg|SINE|Alu	339624	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
32.9-13	chrX	41677787	41678265	+	0.1	NA	intron (NM_003688, intron 5 of 26)	L1MC5a|LINE|L1	-10947	NM_005300	2857	Hs.495989	NM_005300	ENSG00000171659	GPR34	LYPSR1	G protein-coupled receptor 34	protein-coding
45.1	chr11	105888994	105889611	+	0.1	NA	intron (NR_046356, intron 5 of 16)	intron (NR_046356, intron 5 of 16)	132938	NM_032424	84437	Hs.266782	NM_032424	ENSG00000170903	MSANTD4	KIAA1826	Myb/SANT DNA binding domain containing 4 with coiled-coils	protein-coding
17.1-17	chr5	100763215	100763636	+	0.1	NA	Intergenic	Intergenic	53140	NR_031686	100302288		NR_031686	ENSG00000221263	MIR548P	MIRN548P|hsa-mir-548p	microRNA 548p	ncRNA
20.9-18	chr5	134237233	134237551	+	0.1	NA	Intergenic	MIR|SINE|MIR	-11319	NM_002715	5515	Hs.105818	NM_002715	ENSG00000113575	PPP2CA	NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C	protein phosphatase 2 catalytic subunit alpha	protein-coding
23.3-12	chr5	28506608	28507012	+	0.1	NA	Intergenic	HERVL-int|LTR|ERVL	-219145	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
19.5333-4	chr2	76262845	76263252	+	0.1	NA	Intergenic	Intergenic	-552133	NM_001201335	6936	Hs.303808	NM_003203	ENSG00000005436	GCFC2	C2orf3|DNABF|GCF|TCF9	GC-rich sequence DNA-binding factor 2	protein-coding
36.5667-2	chr4	61054901	61055339	+	0.1	NA	Intergenic	Intergenic	-88536	NR_147148	105377249	Hs.575120	NR_147148	ENSG00000240152	LINC02271	-	long intergenic non-protein coding RNA 2271	ncRNA
44.3667	chr2	122838880	122839688	+	0.1	NA	Intergenic	LOR1-int|LTR|ERV1	234197	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
38.4-11	chr7	98629389	98630004	+	0.1	NA	3' UTR (NM_002523, exon 5 of 5)	3' UTR (NM_002523, exon 5 of 5)	12411	NM_002523	4885	Hs.3281	NM_002523	ENSG00000106236	NPTX2	NARP|NP-II|NP2	neuronal pentraxin 2	protein-coding
25.7-7	chr14	53136451	53136843	+	0.1	NA	intron (NM_030637, intron 1 of 11)	L1MEc|LINE|L1	16676	NM_001160147	80821	Hs.125525	NM_030637	ENSG00000100523	DDHD1	PA-PLA1|PAPLA1|SPG28	DDHD domain containing 1	protein-coding
28.7333-13	chr5	148081445	148082036	+	0.1	NA	intron (NM_006846, intron 4 of 32)	L1MB7|LINE|L1	17760	NM_001127698	11005	Hs.331555	NM_006846	ENSG00000133710	SPINK5	LEKTI|LETKI|NETS|NS|VAKTI	serine peptidase inhibitor, Kazal type 5	protein-coding
41.8	chr11	110707876	110708682	+	0.1	NA	intron (NM_001258416, intron 1 of 15)	L1ME1|LINE|L1	3546	NM_001258415	57569	Hs.6136	NM_020809	ENSG00000137727	ARHGAP20	RARHOGAP	Rho GTPase activating protein 20	protein-coding
24.7333-11	chr7	36224346	36224675	+	0.1	NA	intron (NM_030636, intron 2 of 7)	L1M6|LINE|L1	71256	NM_030636	80820	Hs.487994	NM_030636	ENSG00000122547	EEPD1	HSPC107	endonuclease/exonuclease/phosphatase family domain containing 1	protein-coding
12.6-7	chr22	26558801	26559034	+	0.1	NA	intron (NM_001362923, intron 1 of 7)	MER96B|DNA|hAT-Tip100	-3594	NR_031615	100313914		NR_031615	ENSG00000221760	MIR548J	MIRN548J|hsa-mir-548j	microRNA 548j	ncRNA
28.5-8	chr3	11016251	11016849	+	0.1	NA	intron (NM_001348251, intron 2 of 15)	AluYc|SINE|Alu	2674	NR_046647	100874090	Hs.628542	NR_046647	ENSG00000232287	SLC6A1-AS1	-	SLC6A1 antisense RNA 1	ncRNA
11.3-3	chr17	30144899	30145135	+	0.1	NA	intron (NM_032141, intron 2 of 6)	L1ME5|LINE|L1	-27857	NR_036149	100423003		NR_036149	ENSG00000284399	MIR3184	-	microRNA 3184	ncRNA
13.8667-4	chr14	67983810	67983949	+	0.1	NA	intron (NM_133509, intron 7 of 10)	intron (NM_133509, intron 7 of 10)	160287	NM_001321815	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
16.5-12	chr8	126439758	126440094	+	0.1	NA	Intergenic	Intergenic	114431	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA
26.7667-8	chr18	66819083	66819427	+	0.1	NA	Intergenic	L1MC3|LINE|L1	-215165	NM_001271028	28513	Hs.42771	NM_021153	ENSG00000071991	CDH19	CDH7|CDH7L2	cadherin 19	protein-coding
13.4667-9	chr7	3983927	3984101	+	0.1	NA	intron (NM_152744, intron 13 of 44)	Tigger15a|DNA|TcMar-Tigger	-145671	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
52-5	chr4	48679247	48680205	+	0.1	NA	intron (NM_015030, intron 3 of 63)	L1MA5A|LINE|L1	100573	NM_015030	285527	Hs.595553	NM_015030	ENSG00000075539	FRYL	AF4p12|KIAA0826|MOR2	FRY like transcription coactivator	protein-coding
15.8-9	chr20	55382693	55382896	+	0.1	NA	Intergenic	Intergenic	-40249	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA
14.9-9	chr3	163634072	163634298	+	0.1	NA	Intergenic	L1M3|LINE|L1	-330884	NR_033945	647107	Hs.408584	NR_033945	ENSG00000241369	LINC01192	CT64	long intergenic non-protein coding RNA 1192	ncRNA
18.5-8	chr3	188818613	188818933	+	0.1	NA	intron (NM_001167672, intron 7 of 9)	MIRb|SINE|MIR	128866	NR_046873	100874043	Hs.616287	NR_046873	ENSG00000234076	TPRG1-AS1	-	TPRG1 antisense RNA 1	ncRNA
28.6-16	chr2	234391909	234392436	+	0.1	NA	Intergenic	Intergenic	62423	NR_146988	105373934	Hs.471685	NR_146988	ENSG00000231682	LINC01891	-	long intergenic non-protein coding RNA 1891	ncRNA
36.9333-9	chr4	147953854	147954436	+	0.1	NA	intron (NM_024605, intron 15 of 22)	L1ME1|LINE|L1	171550	NR_039962	100616246		NR_039962	ENSG00000264274	MIR4799	-	microRNA 4799	ncRNA
10.7-6	chr3	191890790	191890926	+	0.1	NA	Intergenic	Intergenic	-347772	NR_046596	100873986	Hs.581652	NR_046596	ENSG00000231383	FGF12-AS1	-	FGF12 antisense RNA 1	ncRNA
30.4-12	chr8	106452475	106452906	+	0.1	NA	intron (NM_001198532, intron 1 of 15)	intron (NM_001198532, intron 1 of 15)	4766	NM_001198532	55074	Hs.127286	NM_018002	ENSG00000164830	OXR1	Nbla00307|TLDC3	oxidation resistance 1	protein-coding
20.8-21	chr9	27215209	27215454	+	0.1	NA	intron (NM_001290077, intron 17 of 21)	intron (NM_001290077, intron 17 of 21)	67462	NR_026679	158035	Hs.201554	NR_026679	ENSG00000283945	LINC00032	C9orf14|NCRNA00032	long intergenic non-protein coding RNA 32	ncRNA
22.7667	chr1	31328841	31329287	+	0.1	NA	intron (NM_001282571, intron 3 of 6)	MER21C|LTR|ERVL	32082	NM_016505	51538	Hs.524094	NM_016505	ENSG00000121766	ZCCHC17	HSPC251|PS1D|pNO40	zinc finger CCHC-type containing 17	protein-coding
23.8333-11	chrX	95272070	95272366	+	0.1	NA	Intergenic	THE1D-int|LTR|ERVL-MaLR	-208992	NR_031667	100313772		NR_031667	ENSG00000221187	MIR548M	MIRN548M	microRNA 548m	ncRNA
22.6667-3	chr12	10048797	10049103	+	0.1	NA	intron (NM_207345, intron 2 of 8)	Tigger1|DNA|TcMar-Tigger	18268	NM_207345	283420	Hs.531189	NM_207345	ENSG00000197992	CLEC9A	CD370|DNGR-1|DNGR1|UNQ9341	C-type lectin domain containing 9A	protein-coding
43.7333-3	chr22	23551034	23551950	+	0.1	NA	Intergenic	(CATC)n|Simple_repeat|Simple_repeat	13390	NR_109832	101978785	Hs.575107	NR_109832		PCAT14	-	prostate cancer associated transcript 14	ncRNA
35.3333-10	chr5	100266654	100267175	+	0.1	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	121340	NR_027503	100133050	Hs.534796	NR_027503		LOC100133050	-	glucuronidase beta pseudogene	pseudo
18.6333-10	chr2	228018156	228018435	+	0.1	NA	exon (NM_001142644, exon 7 of 12)	exon (NM_001142644, exon 7 of 12)	146664	NM_178821	164781	Hs.424594	NM_178821	ENSG00000123977	DAW1	ODA16|WDR69	dynein assembly factor with WD repeats 1	protein-coding
24.0333-13	chr5	41936682	41937157	+	0.1	NA	intron (NM_001297437, intron 5 of 5)	MER58A|DNA|hAT-Charlie	11638	NM_012176	26272	Hs.165575	NM_012176	ENSG00000151876	FBXO4	FBX4	F-box protein 4	protein-coding
16.9-4	chr17	74194171	74194561	+	0.1	NA	Intergenic	Intergenic	-9312	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding
34.4333-5	chr12	91136156	91136564	+	0.1	NA	Intergenic	L1ME2z|LINE|L1	-24866	NM_002345	4060	Hs.406475	NM_002345	ENSG00000139329	LUM	LDC|SLRR2D	lumican	protein-coding
12.9667-5	chr15	43966780	43967040	+	0.1	NA	intron (NM_032892, intron 1 of 13)	L2c|LINE|L2	-88739	NR_003571	728758	Hs.658099	NR_003571		PIN4P1	-	peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1	pseudo
17.8-18	chr7	52171564	52171801	+	0.1	NA	Intergenic	L1MC3|LINE|L1	-778426	NR_157843	107986794		NR_157843		LOC107986794	-	uncharacterized LOC107986794	ncRNA
27.6-13	chr5	99550738	99551225	+	0.1	NA	intron (NR_110562, intron 3 of 3)	(TTA)n|Simple_repeat|Simple_repeat	16991	NR_110562	102724855	Hs.519477	NR_110562		LINC02113	CTD-2151A2.1	long intergenic non-protein coding RNA 2113	ncRNA
26.6333	chr1	66352718	66353124	+	0.1	NA	intron (NM_001037339, intron 1 of 9)	intron (NM_001037339, intron 1 of 9)	-1614	NM_001297442	5142	Hs.198072	NM_002600	ENSG00000184588	PDE4B	DPDE4|PDEIVB	phosphodiesterase 4B	protein-coding
16.2667-5	chr20	35114413	35114586	+	0.1	NA	TTS (NM_001355008)	TTS (NM_001355008)	-21684	NM_199368	26133	Hs.168073	NM_015638	ENSG00000100991	TRPC4AP	C20orf188|PPP1R158|TRRP4AP|TRUSS	transient receptor potential cation channel subfamily C member 4 associated protein	protein-coding
47.2333	chr1	85680132	85681007	+	0.1	NA	intron (NM_017953, intron 6 of 9)	L1ME3D|LINE|L1	27864	NM_017953	54680	Hs.5111	NM_017953	ENSG00000117174	ZNHIT6	BCD1|C1orf181|NY-BR-75	zinc finger HIT-type containing 6	protein-coding
13.2-9	chr2	61478199	61478394	+	0.1	NA	3' UTR (NM_003400, exon 25 of 25)	3' UTR (NM_003400, exon 25 of 25)	-7209	NM_014709	9736	Hs.644708	NM_014709	ENSG00000115464	USP34	-	ubiquitin specific peptidase 34	protein-coding
23.4333-10	chr4	118911709	118912211	+	0.1	NA	intron (NM_001128934, intron 1 of 4)	intron (NM_001128934, intron 1 of 4)	23106	NM_001128933	171024	Hs.655519	NM_133477	ENSG00000172403	SYNPO2	-	synaptopodin 2	protein-coding
34.2-2	chr14	59813566	59814034	+	0.1	NA	intron (NM_021136, intron 1 of 8)	Charlie7|DNA|hAT-Charlie	56976	NM_021136	6252	Hs.368626	NM_021136	ENSG00000139970	RTN1	NSP	reticulon 1	protein-coding
14-13	chr7	84193845	84194101	+	0.1	NA	intron (NM_006080, intron 1 of 16)	intron (NM_006080, intron 1 of 16)	816	NM_006080	10371	Hs.252451	NM_006080	ENSG00000075213	SEMA3A	COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1	semaphorin 3A	protein-coding
23.5667-3	chr15	70885350	70885770	+	0.1	NA	intron (NM_020147, intron 1 of 2)	L1ME3A|LINE|L1	6873	NM_020147	56906	Hs.591123	NM_020147	ENSG00000129028	THAP10	-	THAP domain containing 10	protein-coding
27.1333-13	chr8	65742690	65743044	+	0.1	NA	intron (NM_001242318, intron 5 of 12)	intron (NM_001242318, intron 5 of 12)	46190	NM_002603	5150	Hs.527119	NM_002603	ENSG00000205268	PDE7A	HCP1|PDE7	phosphodiesterase 7A	protein-coding
19.9-6	chr17	81225272	81225650	+	0.1	NA	Intergenic	AluJo|SINE|Alu	-2496	NM_001009811	22994	Hs.514578	NM_014984	ENSG00000141577	CEP131	AZ1|AZI1|ZA1	centrosomal protein 131	protein-coding
9.36667	chr10	25653113	25653220	+	0.1	NA	intron (NR_108067, intron 2 of 4)	intron (NR_108067, intron 2 of 4)	1454	NR_108069	101929052	Hs.128298	NR_108067	ENSG00000280809	LINC00836	-	long intergenic non-protein coding RNA 836	ncRNA
11.1667	chr10	36806915	36807026	+	0.1	NA	Intergenic	AluSp|SINE|Alu	-318887	NM_052997	91074	Hs.373787	NM_052997	ENSG00000148513	ANKRD30A	NY-BR-1	ankyrin repeat domain 30A	protein-coding
32.6333	chr11	113238502	113238945	+	0.1	NA	intron (NM_001076682, intron 14 of 18)	intron (NM_001076682, intron 14 of 18)	35178	NR_034101	100288346	Hs.661826	NR_034101	ENSG00000227487	NCAM1-AS1	-	NCAM1 antisense RNA1	ncRNA
25.2667	chr1	89027166	89027472	+	0.1	NA	Intergenic	L1PA11|LINE|L1	-4453	NM_018284	2635	Hs.720167	NM_018284	ENSG00000117226	GBP3	-	guanylate binding protein 3	protein-coding
41.4667-3	chr5	44783540	44784174	+	0.1	NA	intron (NR_109863, intron 1 of 3)	MER41B|LTR|ERV1	24936	NR_109865	100506674	Hs.575213	NR_109862		MRPS30-DT	BRCAT54	MRPS30 divergent transcript	ncRNA
22.4-15	chr4	30858371	30858705	+	0.1	NA	intron (NM_032457, intron 1 of 2)	intron (NM_032457, intron 1 of 2)	138169	NM_032456	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
19.7-6	chr19	12226618	12226942	+	0.1	NA	Intergenic	LTR19-int|LTR|ERV1	31765	NR_104179	100289333	Hs.662603	NR_104179		LOC100289333	-	uncharacterized LOC100289333	ncRNA
14.9-5	chr15	60611135	60611303	+	0.1	NA	intron (NR_120342, intron 5 of 5)	intron (NR_120342, intron 5 of 5)	16311	NM_002943	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding
15.4667-8	chr14	58750882	58751210	+	0.1	NA	Intergenic	MER52A|LTR|ERV1	-77242	NR_110547	102723742	Hs.232734	NR_110547	ENSG00000258583	LINC01500	-	long intergenic non-protein coding RNA 1500	ncRNA
14.6-5	chr17	49853799	49854016	+	0.1	NA	Intergenic	Intergenic	-5890	NM_001077504	255061	Hs.652130	NM_170685	ENSG00000176358	TAC4	EK|HK-1|HK1|PPT-C	tachykinin 4	protein-coding
15.6-7	chr2	183335722	183335905	+	0.1	NA	Intergenic	L1MA7|LINE|L1	211370	NM_138285	129401	Hs.180591	NM_138285	ENSG00000163002	NUP35	MP-44|MP44|NP44|NUP53	nucleoporin 35	protein-coding
19.2333-5	chr11	12409532	12409820	+	0.1	NA	intron (NM_018222, intron 1 of 12)	MLT1D|LTR|ERVL-MaLR	32105	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding
7.7	chr1	189241333	189241487	+	0.1	NA	Intergenic	Intergenic	1234600	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
20.3667-13	chr9	89037705	89038219	+	0.1	NA	intron (NM_016848, intron 11 of 11)	intron (NM_016848, intron 11 of 11)	46494	NM_005226	1903	Hs.585118	NM_005226	ENSG00000213694	S1PR3	EDG-3|EDG3|LPB3|S1P3	sphingosine-1-phosphate receptor 3	protein-coding
28.8333-2	chr22	30160001	30160565	+	0.1	NA	intron (NM_001329457, intron 11 of 11)	(TCTTT)n|Simple_repeat|Simple_repeat	-78911	NR_149070	110806283		NR_149070	ENSG00000232530	LIF-AS1	Lnc-LIF-AS	LIF antisense RNA 1	ncRNA
23.6667-4	chr14	84518649	84519128	+	0.1	NA	Intergenic	L1MA3|LINE|L1	-753044	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
22.2333-15	chr5	174159808	174160167	+	0.1	NA	Intergenic	(CCTCCTG)n|Simple_repeat|Simple_repeat	114281	NM_015980	51617	Hs.559412	NM_015980	ENSG00000170091	NSG2	CALY3|HMP19	neuronal vesicle trafficking associated 2	protein-coding
28.2667-9	chr7	48839510	48840159	+	0.1	NA	Intergenic	Intergenic	-84713	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
24.6667-10	chr4	154564207	154564703	+	0.1	NA	intron (NM_005141, intron 1 of 7)	intron (NM_005141, intron 1 of 7)	1475	NM_001184741	2244	Hs.300774	NM_005141	ENSG00000171564	FGB	HEL-S-78p	fibrinogen beta chain	protein-coding
48.4333	chr1	198007650	198008571	+	0.1	NA	Intergenic	Intergenic	90738	NM_001370213	56956	Hs.442578	NM_020204	ENSG00000143355	LHX9	-	LIM homeobox 9	protein-coding
17.8667-12	chr5	43520509	43520916	+	0.1	NA	Intergenic	L2b|LINE|L2	-5564	NM_198566	375444	Hs.661641	NM_198566	ENSG00000172244	C5orf34	-	chromosome 5 open reading frame 34	protein-coding
22.2333-13	chr4	123388515	123388809	+	0.1	NA	Intergenic	Intergenic	-8133	NM_199327	10252	Hs.744854	NM_005841	ENSG00000164056	SPRY1	hSPRY1	sprouty RTK signaling antagonist 1	protein-coding
21.7333-3	chr12	42206169	42206721	+	0.1	NA	intron (NM_001320080, intron 2 of 4)	AluSx|SINE|Alu	31923	NM_001190977	10138	Hs.649195	NM_005748	ENSG00000015153	YAF2	-	YY1 associated factor 2	protein-coding
20.6333-2	chr1	106163050	106163344	+	0.1	NA	Intergenic	Intergenic	-134944	NR_146609	105378884	Hs.568533	NR_146609		LINC01677	-	long intergenic non-protein coding RNA 1677	ncRNA
17.6667-3	chr19	36340733	36341040	+	0.1	NA	exon (NM_020917, exon 5 of 5)	exon (NM_020917, exon 5 of 5)	-9168	NR_038278	100506930	Hs.595153	NR_038278	ENSG00000232677	LINC00665	-	long intergenic non-protein coding RNA 665	ncRNA
23.8-2	chr12	60968053	60968320	+	0.1	NA	Intergenic	LTR54B|LTR|ERV1	1224653	NM_178539	338811	Hs.269745	NM_178539	ENSG00000198673	TAFA2	FAM19A2|TAFA-2	TAFA chemokine like family member 2	protein-coding
23.6667-3	chr11	33314362	33314605	+	0.1	NA	intron (NM_001278162, intron 2 of 15)	AluSx1|SINE|Alu	56152	NM_001278162	10114	Hs.201918	NM_005734	ENSG00000110422	HIPK3	DYRK6|FIST3|PKY|YAK1	homeodomain interacting protein kinase 3	protein-coding
19.7-7	chr2	102101282	102101568	+	0.1	NA	intron (NM_001320978, intron 1 of 11)	intron (NM_001320978, intron 1 of 11)	-3179	NM_001320986	3554	Hs.701982	NM_000877	ENSG00000115594	IL1R1	CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80	interleukin 1 receptor type 1	protein-coding
29.8-12	chr8	118395343	118395834	+	0.1	NA	intron (NM_001349811, intron 3 of 4)	intron (NM_001349811, intron 3 of 4)	-225413	NR_038210	552860	Hs.571527	NR_038210	ENSG00000281641	SAMD12-AS1	C8orf26|NCRNA00252	SAMD12 antisense RNA 1	ncRNA
13.4667-10	chr8	64720148	64720282	+	0.1	NA	intron (NM_004820, intron 1 of 5)	intron (NM_004820, intron 1 of 5)	78522	NM_001324112	9420	Hs.657330	NM_004820	ENSG00000172817	CYP7B1	CBAS3|CP7B|SPG5A	cytochrome P450 family 7 subfamily B member 1	protein-coding
40.5667-2	chr7	85145242	85145672	+	0.1	NA	Intergenic	Intergenic	-23526	NM_152754	223117	Hs.201340	NM_152754	ENSG00000153993	SEMA3D	Sema-Z2|coll-2	semaphorin 3D	protein-coding
23.4	chr22	25103664	25103986	+	0.1	NA	intron (NR_038941, intron 4 of 4)	MIRb|SINE|MIR	8867	NR_038941	100128531	Hs.662126	NR_038941	ENSG00000203280	LOC100128531	-	uncharacterized LOC100128531	ncRNA
12.3333-12	chr4	130426751	130426903	+	0.1	NA	Intergenic	Intergenic	50466	NR_147186	105377420		NR_147186		LINC02479	-	long intergenic non-protein coding RNA 2479	ncRNA
29-8	chr2	132670235	132670572	+	0.1	NA	promoter-TSS (NM_001321234)	promoter-TSS (NM_001321234)	-198	NM_001321235	116372	Hs.432395	NM_144586	ENSG00000150551	LYPD1	LYPDC1|PHTS	LY6/PLAUR domain containing 1	protein-coding
20.5-10	chr5	77199759	77200215	+	0.1	NA	intron (NM_001349752, intron 1 of 21)	intron (NM_001349752, intron 1 of 21)	-9906	NM_001349753	8622	Hs.584830	NM_003719	ENSG00000113231	PDE8B	ADSD|PPNAD3	phosphodiesterase 8B	protein-coding
28.5667-3	chr10	132317418	132317835	+	0.1	NA	intron (NM_001318878, intron 1 of 11)	AluJb|SINE|Alu	-9676	NM_173575	282974	Hs.469002	NM_173575	ENSG00000165752	STK32C	PKE|YANK3	serine/threonine kinase 32C	protein-coding
27.6333-2	chr1	242146003	242146356	+	0.1	NA	intron (NM_001320272, intron 6 of 10)	intron (NM_001320272, intron 6 of 10)	-147081	NM_001004343	440738	Hs.534971	NM_001004343	ENSG00000197769	MAP1LC3C	ATG8J|LC3C	microtubule associated protein 1 light chain 3 gamma	protein-coding
29.7-5	chr11	66018302	66018824	+	0.1	NA	intron (NM_053054, intron 10 of 11)	intron (NM_053054, intron 10 of 11)	6555	NM_001323	1474	Hs.139389	NM_001323	ENSG00000175315	CST6	-	cystatin E/M	protein-coding
9.03333-2	chr18	12953170	12953272	+	0.1	NA	intron (NM_031216, intron 2 of 8)	L1ME1|LINE|L1	5210	NM_001013437	81929	Hs.301048	NM_031216	ENSG00000085415	SEH1L	SEC13L|SEH1A|SEH1B|Seh1	SEH1 like nucleoporin	protein-coding
16.0333	chr11	65027423	65027710	+	0.1	NA	non-coding (NR_037650, exon 4 of 11)	non-coding (NR_037650, exon 4 of 11)	127	NM_147777	29907	Hs.80132	NM_013306	ENSG00000110025	SNX15	HSAF001435	sorting nexin 15	protein-coding
20.0667-19	chrY	11305290	11305668	+	0.1	NA	Intergenic	BSR/Beta|Satellite|Satellite	1116111	NR_033667	352887	Hs.546221	NR_033667	ENSG00000206159	GYG2P1	GYG2P	glycogenin 2 pseudogene 1	pseudo
28.8333	chr2	184921235	184921763	+	0.1	NA	intron (NM_194250, intron 2 of 3)	L1MA3|LINE|L1	245573	NR_136319	105373782	Hs.128285	NR_136319		LOC105373782	-	uncharacterized LOC105373782	ncRNA
27.7333-12	chr8	135796236	135796513	+	0.1	NA	Intergenic	Intergenic	338918	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	KH RNA binding domain containing, signal transduction associated 3	protein-coding
26.8667-4	chr17	12575571	12575973	+	0.1	NA	intron (NR_034144, intron 1 of 2)	L1ME4a|LINE|L1	25804	NR_034144	284034	Hs.376614	NR_034144	ENSG00000179136	LINC00670	-	long intergenic non-protein coding RNA 670	ncRNA
10.5333-7	chr7	78358230	78358393	+	0.1	NA	non-coding (NR_003680, exon 6 of 6)	non-coding (NR_003680, exon 6 of 6)	11069	NR_003680	399670	Hs.568045	NR_003680	ENSG00000231322	RPL13AP17	RPL13A_6_816	ribosomal protein L13a pseudogene 17	pseudo
14.4-13	chr5	139832415	139832591	+	0.1	NA	intron (NM_032289, intron 7 of 14)	intron (NM_032289, intron 7 of 14)	36695	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding
14.5667-3	chr16	9768813	9769021	+	0.1	NA	exon (NM_000833, exon 13 of 14)	exon (NM_000833, exon 13 of 14)	-313412	NR_126349	104266959	Hs.578888	NR_126349	ENSG00000261075	LINC01195	-	long intergenic non-protein coding RNA 1195	ncRNA
20.0333	chr1	12602417	12602680	+	0.1	NA	intron (NM_004753, intron 1 of 5)	intron (NM_004753, intron 1 of 5)	-5935	NM_001324370	9249	Hs.289347	NM_004753	ENSG00000162496	DHRS3	DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1	dehydrogenase/reductase 3	protein-coding
30.2333-7	chr21	45531986	45532497	+	0.1	NA	intron (NM_001352511, intron 2 of 5)	CpG-18582	2515	NM_001205207	6573	Hs.84190	NM_003056	ENSG00000173638	SLC19A1	CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1	solute carrier family 19 member 1	protein-coding
21.8-4	chr11	55550309	55550833	+	0.1	NA	Intergenic	Intergenic	-3698	NM_001001920	81309		NM_001001920	ENSG00000181939	OR4C15	OR11-127|OR11-134	olfactory receptor family 4 subfamily C member 15	protein-coding
41.8333	chr1	32251292	32251887	+	0.1	NA	intron (NM_005356, intron 1 of 12)	intron (NM_005356, intron 1 of 12)	324	NM_001330468	3932	Hs.470627	NM_005356	ENSG00000182866	LCK	IMD22|LSK|YT16|p56lck|pp58lck	LCK proto-oncogene, Src family tyrosine kinase	protein-coding
7.6-2	chr2	131545301	131545380	+	0.1	NA	Intergenic	REP522|Satellite|telo	17452	NM_001349044	90557	Hs.351461	NM_138770	ENSG00000163040	CCDC74A	-	coiled-coil domain containing 74A	protein-coding
36.5-2	chr1	233005705	233006156	+	0.1	NA	intron (NM_014801, intron 28 of 33)	intron (NM_014801, intron 28 of 33)	55088	NR_138027	84284	Hs.642715	NM_032324	ENSG00000135778	NTPCR	C1orf57|HCR-NTPase|THEP1	nucleoside-triphosphatase, cancer-related	protein-coding
22.8	chr10	15750471	15750920	+	0.1	NA	Intergenic	Intergenic	-30360	NM_001291494	8516	Hs.171311	NM_003638	ENSG00000077943	ITGA8	-	integrin subunit alpha 8	protein-coding
28.6-18	chr22	47806744	47807209	+	0.1	NA	intron (NR_122046, intron 8 of 8)	intron (NR_122046, intron 8 of 8)	175302	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA
10.4	chr1	18761384	18761597	+	0.1	NA	Intergenic	Intergenic	98171	NM_152232	80834	Hs.553548	NM_152232	ENSG00000179002	TAS1R2	GPR71|T1R2|TR2	taste 1 receptor member 2	protein-coding
32.7667-4	chr17	15906442	15907199	+	0.1	NA	Intergenic	Intergenic	-38097	NM_000676	136	Hs.167046	NM_000676	ENSG00000170425	ADORA2B	ADORA2	adenosine A2b receptor	protein-coding
8.23333	chr10	125474313	125474495	+	0.1	NA	Intergenic	L1MC3|LINE|L1	-99967	NR_023362	100169752	Hs.652647	NR_023362	ENSG00000237675	TEX36-AS1	-	TEX36 antisense RNA 1	ncRNA
19.9-7	chr2	16411518	16411740	+	0.1	NA	Intergenic	L2-1_AMi|LINE|L2	254205	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding
22.9-12	chr5	88344754	88345076	+	0.1	NA	intron (NR_105019, intron 6 of 7)	AluJo|SINE|Alu	-47280	NR_105020	100505894	Hs.559426	NR_039993	ENSG00000247828	TMEM161B-AS1	linc-POLR3G-8	TMEM161B antisense RNA 1	ncRNA
14-8	chr2	23772277	23772528	+	0.1	NA	intron (NR_125717, intron 23 of 28)	intron (NR_125717, intron 23 of 28)	154721	NM_001242338	54454	Hs.467862	NM_017552	ENSG00000119778	ATAD2B	-	ATPase family AAA domain containing 2B	protein-coding
34.0333-8	chr7	84647572	84648190	+	0.1	NA	Intergenic	Intergenic	115405	NR_110079	101927378	Hs.539042	NR_110079	ENSG00000235139	LOC101927378	-	uncharacterized LOC101927378	ncRNA
28.9667-6	chr4	96936026	96936601	+	0.1	NA	Intergenic	Intergenic	-430613	NR_102713	101410545	Hs.628520	NR_102713	ENSG00000251620	STPG2-AS1	-	STPG2 antisense RNA 1	ncRNA
25.5667-10	chr3	12227307	12227700	+	0.1	NA	Intergenic	Intergenic	-59982	NM_001354666	5468	Hs.162646	NM_005037	ENSG00000132170	PPARG	CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma	peroxisome proliferator activated receptor gamma	protein-coding
18.1667-6	chr16	6936794	6937158	+	0.1	NA	intron (NM_001142334, intron 1 of 13)	L1PA2|LINE|L1	163167	NM_001142334	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
21.4333-6	chr13	62036847	62037231	+	0.1	NA	Intergenic	MLT2A2|LTR|ERVL	-7491	NR_046995	100874143	Hs.552684	NR_046995	ENSG00000229578	LINC00358	-	long intergenic non-protein coding RNA 358	ncRNA
21.9667-4	chr18	911354	911795	+	0.1	NA	3' UTR (NM_001117, exon 4 of 4)	3' UTR (NM_001117, exon 4 of 4)	6208	NM_001117	116	Hs.531719	NM_001117	ENSG00000141433	ADCYAP1	PACAP	adenylate cyclase activating polypeptide 1	protein-coding
39.1333-3	chr2	215486789	215487455	+	0.1	NA	Intergenic	MamGypsy2-I|LTR|Gypsy	33415	NR_110607	102724849	Hs.116161	NR_110607	ENSG00000225166	LOC102724849	-	uncharacterized LOC102724849	ncRNA
19.6-11	chr20	54392147	54392414	+	0.1	NA	Intergenic	L1ME2|LINE|L1	-83313	NM_018431	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
19.6333-5	chr17	42280551	42280916	+	0.1	NA	Intergenic	Intergenic	-4327	NM_012448	6777	Hs.595276	NM_012448	ENSG00000173757	STAT5B	STAT5	signal transducer and activator of transcription 5B	protein-coding
7.4-4	chr12	82287269	82287393	+	0.1	NA	Intergenic	MLT1J1|LTR|ERVL-MaLR	71056	NM_014167	29080	Hs.582627	NM_014167	ENSG00000133773	CCDC59	BR22|HSPC128|TAP26	coiled-coil domain containing 59	protein-coding
33.7667	chr1	73397205	73397610	+	0.1	NA	Intergenic	Intergenic	91237	NR_110676	101927295	Hs.436589	NR_110676	ENSG00000233973	LINC01360	-	long intergenic non-protein coding RNA 1360	ncRNA
31.3-5	chr18	35701952	35702335	+	0.1	NA	intron (NM_020474, intron 8 of 10)	intron (NM_020474, intron 8 of 10)	47574	NM_020474	2589	Hs.514806	NM_020474	ENSG00000141429	GALNT1	GALNAC-T1	polypeptide N-acetylgalactosaminyltransferase 1	protein-coding
18.7667-9	chr20	46596361	46596719	+	0.1	NA	intron (NM_001193339, intron 3 of 11)	L1ME4a|LINE|L1	-45886	NM_080721	128506		NM_080721	ENSG00000149635	OCSTAMP	C20orf123|OC-STAMP|dJ257E24.3	osteoclast stimulatory transmembrane protein	protein-coding
26-7	chr6	23762923	23763449	+	0.1	NA	Intergenic	Intergenic	-363029	NM_080723	140767	Hs.726270	NM_080723	ENSG00000152954	NRSN1	VMP|p24	neurensin 1	protein-coding
12.3-2	chr15	63058969	63059219	+	0.1	NA	intron (NM_000366, intron 3 of 9)	intron (NM_000366, intron 3 of 9)	-9707	NR_147233	111064646	Hs.602995	NR_147233		TPM1-AS	TPM1-AS1	TPM1 antisense RNA	ncRNA
41.0667-3	chr2	53782681	53783118	+	0.1	NA	intron (NM_001164165, intron 1 of 9)	AluSq2|SINE|Alu	-4032	NM_001127397	27248	Hs.438336	NM_015701	ENSG00000068912	ERLEC1	C2orf30|CIM|CL24936|CL25084|HEL117|XTP3-B|XTP3TPB	endoplasmic reticulum lectin 1	protein-coding
12.8667-5	chr3	110766536	110766733	+	0.1	NA	Intergenic	L1MA8|LINE|L1	303325	NR_045114	100506555	Hs.535689	NR_045114		NECTIN3-AS1	PVRL3-AS1	NECTIN3 antisense RNA 1	ncRNA
30.4667-12	chr8	120357208	120357620	+	0.1	NA	intron (NM_021110, intron 45 of 47)	MLT1F1|LTR|ERVL-MaLR	87736	NM_014078	28998	Hs.333823	NM_014078	ENSG00000172172	MRPL13	L13|L13A|L13mt|RPL13|RPML13	mitochondrial ribosomal protein L13	protein-coding
27.2333-7	chr5	97621770	97622330	+	0.1	NA	intron (NR_105028, intron 2 of 3)	L1PA15|LINE|L1	117354	NR_105028	102546227	Hs.582516	NR_105028	ENSG00000250331	LINC01340	-	long intergenic non-protein coding RNA 1340	ncRNA
22.1667-2	chr13	83059732	83060089	+	0.1	NA	Intergenic	Intergenic	822483	NM_052910	114798	Hs.415478	NM_052910	ENSG00000178235	SLITRK1	LRRC12|TTM	SLIT and NTRK like family member 1	protein-coding
9.23333-4	chr8	126177244	126177344	+	0.1	NA	Intergenic	Intergenic	-148201	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA
23.3667-6	chr18	6436923	6437366	+	0.1	NA	Intergenic	AluSx4|SINE|Alu	-21885	NM_001365765	91133	Hs.128279	NM_173464	ENSG00000154655	L3MBTL4	HsT1031	L3MBTL histone methyl-lysine binding protein 4	protein-coding
31.4-9	chr2	112146849	112147412	+	0.1	NA	intron (NM_001128165, intron 1 of 6)	L1ME1|LINE|L1	8745	NM_153214	129804	Hs.437696	NM_153214	ENSG00000144152	FBLN7	TM14	fibulin 7	protein-coding
13.1-5	chr20	44696553	44696760	+	0.1	NA	Intergenic	Intergenic	-18188	NM_003881	8839	Hs.592145	NM_003881	ENSG00000064205	CCN5	CT58|CTGF-L|WISP2	cellular communication network factor 5	protein-coding
12.2333-4	chr14	88886846	88886995	+	0.1	NA	Intergenic	L1ME1|LINE|L1	62269	NR_159362	123016	Hs.303055	NM_144596	ENSG00000165533	TTC8	BBS8|RP51	tetratricopeptide repeat domain 8	protein-coding
27.4-22	chr8	117141853	117142330	+	0.1	NA	intron (NM_173851, intron 1 of 7)	L2a|LINE|L2	7096	NM_173851	169026	Hs.532270	NM_173851	ENSG00000164756	SLC30A8	ZNT8|ZnT-8	solute carrier family 30 member 8	protein-coding
26.7-6	chr2	50876990	50877366	+	0.1	NA	intron (NM_001330093, intron 4 of 22)	(CA)n|Simple_repeat|Simple_repeat	154954	NM_001330079	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
26.8333-7	chr6	69733532	69733916	+	0.1	NA	intron (NM_001367272, intron 7 of 15)	intron (NM_001367272, intron 7 of 15)	62742	NM_001363722	55788	Hs.271643	NM_018368	ENSG00000168216	LMBRD1	C6orf209|LMBD1|MAHCF|NESI	LMBR1 domain containing 1	protein-coding
5.53333	chr14	92014870	92014925	+	0.1	NA	intron (NM_004239, intron 6 of 20)	intron (NM_004239, intron 6 of 20)	25162	NM_001321851	9321	Hs.632339	NM_004239	ENSG00000100815	TRIP11	ACG1A|CEV14|GMAP-210|GMAP210|ODCD|TRIP-11|TRIP230	thyroid hormone receptor interactor 11	protein-coding
23.3333-14	chr7	33019556	33019956	+	0.1	NA	intron (NM_001356996, intron 7 of 10)	intron (NM_001356996, intron 7 of 10)	21150	NM_016489	51251	Hs.487933	NM_016489	ENSG00000122643	NT5C3A	NT5C3|P5'N-1|P5N-1|PN-I|POMP|PSN1|UMPH|UMPH1|cN-III|hUMP1|p36	5'-nucleotidase, cytosolic IIIA	protein-coding
14.6333-15	chr8	126359130	126359348	+	0.1	NA	Intergenic	Intergenic	33744	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA
17.4-7	chr15	70676535	70676970	+	0.1	NA	intron (NM_018003, intron 12 of 18)	intron (NM_018003, intron 12 of 18)	25530	NM_001008224	55075	Hs.108049	NM_018003	ENSG00000137831	UACA	NUCLING	uveal autoantigen with coiled-coil domains and ankyrin repeats	protein-coding
16-5	chr5	37336561	37336822	+	0.1	NA	intron (NM_001278312, intron 12 of 33)	intron (NM_001278312, intron 12 of 33)	34415	NM_001278312	9631	Hs.547696	NM_004298	ENSG00000113569	NUP155	ATFB15|N155	nucleoporin 155	protein-coding
21-13	chr8	117654095	117654556	+	0.1	NA	Intergenic	MIR|SINE|MIR	133612	NM_080651	90390	Hs.492612	NM_080651	ENSG00000164758	MED30	MED30S|THRAP6|TRAP25	mediator complex subunit 30	protein-coding
10.5667-5	chr8	129842352	129842506	+	0.1	NA	intron (NM_001353307, intron 13 of 13)	intron (NM_001353307, intron 13 of 13)	-55805	NM_031415	56169	Hs.133244	NM_031415	ENSG00000147697	GSDMC	MLZE	gasdermin C	protein-coding
31.3333-5	chr2	128844689	128845292	+	0.1	NA	Intergenic	L1MB3|LINE|L1	-19610	NR_110278	101927881	Hs.570247	NR_110278		LOC101927881	-	uncharacterized LOC101927881	ncRNA
28.6333-4	chr15	65225093	65225475	+	0.1	NA	Intergenic	Intergenic	-13811	NM_003613	8483	Hs.442180	NM_003613	ENSG00000138615	CILP	CILP-1|HsT18872	cartilage intermediate layer protein	protein-coding
15.6-6	chr2	14831470	14831668	+	0.1	NA	Intergenic	Intergenic	198852	NR_144632	151354	Hs.260855	NM_145175	ENSG00000162981	LRATD1	FAM84A|NSE1|PP11517	LRAT domain containing 1	protein-coding
16.8667-9	chr20	62945553	62945871	+	0.1	NA	3' UTR (NM_017896, exon 5 of 5)	3' UTR (NM_017896, exon 5 of 5)	-6997	NM_001302643	63910	Hs.512686	NM_022082	ENSG00000101194	SLC17A9	C20orf59|POROK8|VNUT	solute carrier family 17 member 9	protein-coding
18.7333-11	chr19	11990573	11990969	+	0.1	NA	intron (NR_134929, intron 1 of 2)	L1PB1|LINE|L1	3154	NR_134927	101928464	Hs.631643	NR_134927	ENSG00000219665	ZNF433-AS1	-	ZNF433 and ZNF878 antisense RNA 1	ncRNA
31.4666	chr16	30736860	30737519	+	0.1	NA	exon (NM_006662, exon 34 of 34)	exon (NM_006662, exon 34 of 34)	-3453	NM_001256829	100862671	Hs.667372	NM_001256829	ENSG00000281991	TMEM265	IFITMD8	transmembrane protein 265	protein-coding
16.7333-16	chr7	13240582	13240957	+	0.1	NA	Intergenic	MLT1N2|LTR|ERVL-MaLR	553136	NM_005738	10124	Hs.245540	NM_005738	ENSG00000122644	ARL4A	ARL4	ADP ribosylation factor like GTPase 4A	protein-coding
21.8667-2	chr12	29344013	29344496	+	0.1	NA	intron (NM_016570, intron 11 of 13)	L1MC5a|LINE|L1	-26406	NR_103860	100506606	Hs.298851	NR_103860	ENSG00000257176	LOC100506606	-	uncharacterized LOC100506606	ncRNA
12.0667-7	chr2	111641599	111641722	+	0.1	NA	Intergenic	Intergenic	129474	NR_039928	100616370		NR_039928	ENSG00000264793	MIR4771-1	-	microRNA 4771-1	ncRNA
19.1667-9	chr3	99814550	99814896	+	0.1	NA	Intergenic	MER96|DNA|hAT-Tip100	-3139	NM_032359	84319	Hs.581320	NM_032359	ENSG00000184220	CMSS1	C3orf26	cms1 ribosomal small subunit homolog	protein-coding
19.6-12	chr4	18022658	18022937	+	0.1	NA	promoter-TSS (NM_001365658)	promoter-TSS (NM_001365658)	-922	NM_001365663	254251	Hs.446201	NM_153686	ENSG00000178177	LCORL	MLR1	ligand dependent nuclear receptor corepressor like	protein-coding
36.1-7	chr8	131866608	131867249	+	0.1	NA	Intergenic	L1ME3G|LINE|L1	-37165	NR_136615	23167	Hs.204564	NM_015137	ENSG00000132294	EFR3A	-	EFR3 homolog A	protein-coding
15.3-2	chr14	24543034	24543197	+	0.1	NA	Intergenic	Intergenic	33135	NM_001911	1511	Hs.421724	NM_001911	ENSG00000100448	CTSG	CATG|CG	cathepsin G	protein-coding
14.6-4	chr17	26789764	26789950	+	0.1	NA	Intergenic	Intergenic	299384	NR_135673	105371703	Hs.649918	NR_135673		LOC105371703	-	uncharacterized LOC105371703	ncRNA
23.3667-16	chr8	61615824	61616082	+	0.1	NA	intron (NM_004318, intron 14 of 24)	intron (NM_004318, intron 14 of 24)	73858	NM_032467	444	Hs.332422	NM_004318	ENSG00000198363	ASPH	AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin	aspartate beta-hydroxylase	protein-coding
20.0333-3	chr12	130751546	130751873	+	0.1	NA	Intergenic	Intergenic	-35404	NM_001351233	23504	Hs.657441	NM_015347	ENSG00000060709	RIMBP2	PPP1R133|RBP2|RIM-BP2	RIMS binding protein 2	protein-coding
32.0667-4	chr5	152475060	152475547	+	0.1	NA	Intergenic	Intergenic	-70024	NM_020167	56923	Hs.731911	NM_020167	ENSG00000132911	NMUR2	FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1	neuromedin U receptor 2	protein-coding
25.6667-6	chr3	26799746	26800328	+	0.1	NA	Intergenic	Intergenic	105480	NM_001317811	116135	Hs.517868	NM_052953	ENSG00000179796	LRRC3B	LRP15	leucine rich repeat containing 3B	protein-coding
19.9667-4	chr12	9339759	9339958	+	0.1	NA	Intergenic	Intergenic	-27606	NR_120479	101930452	Hs.734183	NR_120479	ENSG00000260423	LINC02367	-	long intergenic non-protein coding RNA 2367	ncRNA
19.9667-10	chr5	75400439	75400664	+	0.1	NA	intron (NM_031361, intron 9 of 16)	intron (NM_031361, intron 9 of 16)	63331	NM_000859	3156	Hs.628096	NM_000859	ENSG00000113161	HMGCR	LDLCQ3	3-hydroxy-3-methylglutaryl-CoA reductase	protein-coding
18.5667	chr11	99142099	99142348	+	0.1	NA	intron (NM_001243270, intron 1 of 23)	L1P4e|LINE|L1	121274	NM_001243270	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
40.8667-3	chr5	65694916	65695381	+	0.1	NA	intron (NM_019072, intron 5 of 10)	intron (NM_019072, intron 5 of 10)	26961	NM_019072	54557	Hs.482301	NM_019072	ENSG00000197860	SGTB	SGT2	small glutamine rich tetratricopeptide repeat containing beta	protein-coding
8.76667-3	chr6	44631464	44631551	+	0.1	NA	Intergenic	(GAAT)n|Simple_repeat|Simple_repeat	-79626	NR_134609	105375075	Hs.123393	NR_134609		LOC105375075	-	uncharacterized LOC105375075	ncRNA
19.2667-9	chr5	66506388	66506828	+	0.1	NA	TTS (NR_105001)	TTS (NR_105001)	4996	NR_105001	101928769	Hs.97903	NR_105001	ENSG00000250313	LINC02229	-	long intergenic non-protein coding RNA 2229	ncRNA
17.5-7	chr19	47071913	47072239	+	0.1	NA	exon (NM_015168, exon 13 of 15)	exon (NM_015168, exon 13 of 15)	-23452	NM_017854	54958	Hs.105606	NM_017854	ENSG00000130748	TMEM160	-	transmembrane protein 160	protein-coding
23.3333-8	chr3	32960521	32960956	+	0.1	NA	Intergenic	Intergenic	9094	NM_005508	1233	Hs.184926	NM_005508	ENSG00000183813	CCR4	CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5	C-C motif chemokine receptor 4	protein-coding
31.8-6	chr14	71560342	71560966	+	0.1	NA	intron (NM_001354289, intron 5 of 23)	intron (NM_001354289, intron 5 of 23)	-25644	NM_001284246	26037	Hs.654657	NM_015556	ENSG00000197555	SIPA1L1	E6TP1|SPAR1	signal induced proliferation associated 1 like 1	protein-coding
18.0667-5	chr2	106629674	106629948	+	0.1	NA	Intergenic	Intergenic	142447	NM_001349727	927	Hs.534308	NM_001349727	ENSG00000232001	CD8B2	CD8BP	CD8b2 molecule	protein-coding
32.1333-10	chrX	100496512	100497165	+	0.1	NA	Intergenic	Intergenic	-86565	NM_001105243	57526	Hs.4993	NM_020766	ENSG00000165194	PCDH19	EFMR|EIEE9	protocadherin 19	protein-coding
12.1667-6	chr6	113200811	113200957	+	0.1	NA	Intergenic	MIR|SINE|MIR	232563	NR_149098	105377957	Hs.25088	NR_149098	ENSG00000232316	LINC02518	-	long intergenic non-protein coding RNA 2518	ncRNA
20.4-16	chr7	35656901	35657335	+	0.1	NA	intron (NM_022373, intron 5 of 8)	L1MA4A|LINE|L1	38017	NM_022373	64224	Hs.643051	NM_022373	ENSG00000122557	HERPUD2	-	HERPUD family member 2	protein-coding
21.2-10	chr15	42897251	42897670	+	0.1	NA	intron (NM_173500, intron 1 of 14)	intron (NM_173500, intron 1 of 14)	23318	NM_173500	146057	Hs.646511	NM_173500	ENSG00000128881	TTBK2	SCA11|TTBK	tau tubulin kinase 2	protein-coding
19.1667-5	chr13	87236010	87236428	+	0.1	NA	Intergenic	Intergenic	324299	NR_132371	106144533	Hs.525107	NR_132371		LINC00430	-	long intergenic non-protein coding RNA 430	ncRNA
21.1667	chr1	40152282	40152737	+	0.1	NA	Intergenic	ERV24_Prim-int|LTR|ERV1	-8878	NM_012421	6018	Hs.205627	NM_012421	ENSG00000117000	RLF	ZN-15L|ZNF292L	rearranged L-myc fusion	protein-coding
15.6333-7	chr16	24519284	24519460	+	0.1	NA	Intergenic	L1MEb|LINE|L1	-20194	NM_006910	5930	Hs.188553	NM_006910	ENSG00000122257	RBBP6	MY038|P2P-R|PACT|RBQ-1|SNAMA	RB binding protein 6, ubiquitin ligase	protein-coding
37.5667-3	chr2	238718899	238719531	+	0.1	NA	Intergenic	AluJr4|SINE|Alu	128692	NR_157851	100287387	Hs.516864	NR_157851		LOC100287387	-	uncharacterized LOC100287387	ncRNA
24.2667	chr1	45854786	45855282	+	0.1	NA	intron (NM_001324320, intron 3 of 29)	MER21C|LTR|ERVL	-9314	NM_001324321	23139	Hs.319481	NM_015112	ENSG00000086015	MAST2	MAST205|MTSSK	microtubule associated serine/threonine kinase 2	protein-coding
19.8333-4	chr12	19857614	19858042	+	0.1	NA	Intergenic	Intergenic	-156857	NR_040098	100506393	Hs.658356	NR_040098	ENSG00000256287	LINC02398	-	long intergenic non-protein coding RNA 2398	ncRNA
27.2667-11	chr2	117120980	117121529	+	0.1	NA	Intergenic	AluJr4|SINE|Alu	-693437	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
24.7333-6	chr17	51931708	51932031	+	0.1	NA	intron (NM_001082533, intron 3 of 9)	intron (NM_001082533, intron 3 of 9)	226845	NM_020178	56934	Hs.463466	NM_020178	ENSG00000154975	CA10	CA-RPX|CARPX|HUCEP-15	carbonic anhydrase 10	protein-coding
35.1333-6	chr3	128057694	128058389	+	0.1	NA	intron (NM_013336, intron 5 of 11)	MIR|SINE|MIR	5604	NM_013336	29927	Hs.518236	NM_013336	ENSG00000058262	SEC61A1	HNFJ4|HSEC61|SEC61|SEC61A	SEC61 translocon alpha 1 subunit	protein-coding
17.6667-4	chr2	72728566	72728857	+	0.1	NA	intron (NR_135774, intron 5 of 19)	MLT1I|LTR|ERVL-MaLR	97322	NR_135774	23233	Hs.303454	NM_015189	ENSG00000144036	EXOC6B	SEC15B|SEC15L2|SEMDJL3	exocyst complex component 6B	protein-coding
22.0333-3	chr18	10583824	10584172	+	0.1	NA	Intergenic	AluY|SINE|Alu	42422	NR_146509	102724470		NR_146509		LINC01887	-	long intergenic non-protein coding RNA 1887	ncRNA
9.3-3	chr11	25613798	25613974	+	0.1	NA	Intergenic	Intergenic	-575237	NM_001313726	63982	Hs.91791	NM_031418	ENSG00000134343	ANO3	C11orf25|DYT23|DYT24|GENX-3947|TMEM16C	anoctamin 3	protein-coding
38-4	chr21	21038021	21038813	+	0.1	NA	intron (NM_001352595, intron 1 of 14)	THE1C|LTR|ERVL-MaLR	40008	NM_001352591	4685	Hs.473450	NM_004540	ENSG00000154654	NCAM2	NCAM21	neural cell adhesion molecule 2	protein-coding
21.2-13	chr18	24732410	24732719	+	0.1	NA	intron (NR_134604, intron 2 of 2)	intron (NR_134604, intron 2 of 2)	6783	NR_134604	105372028	Hs.569901	NR_134604	ENSG00000266573	LOC105372028	-	uncharacterized LOC105372028	ncRNA
26.5333-6	chr2	178438485	178438978	+	0.1	NA	intron (NM_001139517, intron 5 of 6)	AluY|SINE|Alu	11897	NM_001139518	8575	Hs.570274	NM_003690	ENSG00000180228	PRKRA	DYT16|HSD14|PACT|RAX	protein activator of interferon induced protein kinase EIF2AK2	protein-coding
11.2667-6	chr9	119230388	119230533	+	0.1	NA	intron (NM_014618, intron 5 of 7)	L2a|LINE|L2	138975	NM_014618	1620	Hs.532316	NM_014618	ENSG00000078725	BRINP1	DBC1|DBCCR1|FAM5A	BMP/retinoic acid inducible neural specific 1	protein-coding
24.9667-9	chr2	238725430	238725831	+	0.1	NA	Intergenic	LTR75B|LTR|ERVL	122277	NR_157851	100287387	Hs.516864	NR_157851		LOC100287387	-	uncharacterized LOC100287387	ncRNA
20.3667-4	chr17	29213783	29214069	+	0.1	NA	Intergenic	(TATTTT)n|Simple_repeat|Simple_repeat	-32931	NM_005208	1411	Hs.46275	NM_005208	ENSG00000108255	CRYBA1	CRYB1|CTRCT10	crystallin beta A1	protein-coding
14.1333-10	chr3	130817251	130817491	+	0.1	NA	Intergenic	Intergenic	-33224	NM_001199182	27032	Hs.584884	NM_014382	ENSG00000017260	ATP2C1	ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1	ATPase secretory pathway Ca2+ transporting 1	protein-coding
22.5-12	chr9	84310433	84310961	+	0.1	NA	intron (NR_037638, intron 2 of 18)	intron (NR_037638, intron 2 of 18)	30061	NM_001199633	64078	Hs.535966	NM_022127	ENSG00000197506	SLC28A3	CNT3	solute carrier family 28 member 3	protein-coding
16.3667	chr10	11839731	11840028	+	0.1	NA	intron (NM_153256, intron 1 of 3)	intron (NM_153256, intron 1 of 3)	16523	NM_153256	254427	Hs.435775	NM_153256	ENSG00000148426	PROSER2	C10orf47	proline and serine rich 2	protein-coding
12.5333-4	chr8	85387420	85387653	+	0.1	NA	Intergenic	Intergenic	-9423	NM_001128830	759	Hs.23118	NM_001738	ENSG00000133742	CA1	CA-I|CAB|Car1|HEL-S-11	carbonic anhydrase 1	protein-coding
14.6333	chr1	114429391	114429558	+	0.1	NA	intron (NM_015906, intron 6 of 19)	AluSg|SINE|Alu	81729	NM_033020	51592	Hs.26837	NM_015906	ENSG00000197323	TRIM33	ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA	tripartite motif containing 33	protein-coding
19.8-11	chr22	28027335	28027558	+	0.1	NA	intron (NM_001145418, intron 13 of 22)	intron (NM_001145418, intron 13 of 22)	-106834	NR_036169	100423034		NR_036169	ENSG00000264073	MIR3199-1	mir-3199-1	microRNA 3199-1	ncRNA
18.9333-11	chr5	41085826	41086285	+	0.1	NA	Intergenic	L1MEc|LINE|L1	-14713	NM_173489	133558	Hs.97714	NM_173489	ENSG00000171495	MROH2B	HEATR7B2|SPIF	maestro heat like repeat family member 2B	protein-coding
10.9-8	chr6	164757217	164757329	+	0.1	NA	Intergenic	Intergenic	64790	NR_131926	105378111		NR_131926		MEAT6	-	melanoma-associated transcript 6	ncRNA
22.7333-7	chr4	39898310	39898729	+	0.1	NA	exon (NM_001100400, exon 16 of 16)	exon (NM_001100400, exon 16 of 16)	79392	NM_001100399	23244	Hs.331431	NM_015200	ENSG00000121892	PDS5A	PIG54|SCC-112|SCC112	PDS5 cohesin associated factor A	protein-coding
11.1667-5	chr4	39551263	39551423	+	0.1	NA	3' UTR (NM_001317897, exon 5 of 5)	3' UTR (NM_001317897, exon 5 of 5)	23504	NR_047679	100885776	Hs.640769	NR_047679	ENSG00000249348	UGDH-AS1	-	UGDH antisense RNA 1	ncRNA
12-6	chr6	95809311	95809530	+	0.1	NA	Intergenic	L1PA15|LINE|L1	-206554	NM_006581	10690	Hs.49117	NM_006581	ENSG00000172461	FUT9	Fuc-TIX	fucosyltransferase 9	protein-coding
16.4667-7	chr5	38337745	38337938	+	0.1	NA	intron (NM_152403, intron 2 of 21)	intron (NM_152403, intron 2 of 21)	-46855	NR_046219	100852408	Hs.570954	NR_046219	ENSG00000248730	EGFLAM-AS4	-	EGFLAM antisense RNA 4	ncRNA
33.6-8	chr5	110001660	110002231	+	0.1	NA	Intergenic	Intergenic	118763	NR_033175	100289673	Hs.368405	NR_033175		LINC01848	-	long intergenic non-protein coding RNA 1848	ncRNA
16.6-10	chr4	64908163	64908480	+	0.1	NA	Intergenic	L1MC3|LINE|L1	96179	NR_033976	401134	Hs.165899	NR_033976	ENSG00000250125	LINC02232	-	long intergenic non-protein coding RNA 2232	ncRNA
34.7667-4	chr11	69978109	69978583	+	0.1	NA	Intergenic	AluJo|SINE|Alu	85578	NR_120530	101928443	Hs.313468	NR_120529	ENSG00000248844	LINC02753	-	long intergenic non-protein coding RNA 2753	ncRNA
31.3667-6	chr2	179367471	179367919	+	0.1	NA	Intergenic	L1ME1|LINE|L1	-102863	NM_178123	91404	Hs.30977	NM_178123	ENSG00000187231	SESTD1	SOLO	SEC14 and spectrin domain containing 1	protein-coding
37.5333-3	chr11	130591758	130592336	+	0.1	NA	Intergenic	L1MA4A|LINE|L1	-74688	NR_107019	102466873		NR_107019	ENSG00000274999	MIR8052	hsa-mir-8052	microRNA 8052	ncRNA
15.5-8	chr3	55353418	55353658	+	0.1	NA	Intergenic	Intergenic	127860	NM_001256105	7474	Hs.643085	NM_003392	ENSG00000114251	WNT5A	hWNT5A	Wnt family member 5A	protein-coding
9.8-4	chr2	67078725	67078895	+	0.1	NA	Intergenic	Intergenic	-7636	NR_110564	102800447	Hs.144196	NR_110564		LINC01828	-	long intergenic non-protein coding RNA 1828	ncRNA
20.4667-7	chr3	113660915	113661374	+	0.1	NA	exon (NM_001009899, exon 7 of 7)	exon (NM_001009899, exon 7 of 7)	35498	NM_001009899	205717	Hs.632570	NM_001009899	ENSG00000176542	USF3	KIAA2018	upstream transcription factor family member 3	protein-coding
49.1333-2	chr9	31610587	31611491	+	0.1	NA	Intergenic	Intergenic	-229549	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
33.7667-9	chr9	91260845	91261478	+	0.1	NA	intron (NM_001698, intron 6 of 9)	L1MEc|LINE|L1	100763	NM_001698	549	Hs.175905	NM_001698	ENSG00000148090	AUH	-	AU RNA binding methylglutaconyl-CoA hydratase	protein-coding
26.3333-11	chr8	4010249	4010778	+	0.1	NA	intron (NM_033225, intron 4 of 69)	L2a|LINE|L2	984401	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding
34.7-2	chr1	149878405	149878796	+	0.1	NA	Intergenic	MIRb|SINE|MIR	8082	NM_003528	8349	Hs.2178	NM_003528	ENSG00000184678	HIST2H2BE	GL105|H2B|H2B.1|H2BFQ|H2BGL105|H2BQ	histone cluster 2 H2B family member e	protein-coding
26.9333-9	chr16	68864846	68865250	+	0.1	NA	intron (NM_024562, intron 3 of 17)	AluSg7|SINE|Alu	21517	NM_024562	79613	Hs.13526	NM_024562	ENSG00000103047	TANGO6	TMCO7	transport and golgi organization 6 homolog	protein-coding
10.2667-6	chr3	15153579	15153751	+	0.1	NA	Intergenic	Intergenic	52294	NR_027927	344875	Hs.722756	NR_027927	ENSG00000230524	COL6A4P1	COL6A4|COL6A4P|DIVA|DVWA|VWA6	collagen type VI alpha 4 pseudogene 1	pseudo
32.5667	chr1	38416588	38416944	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-58430	NR_146761	105378656	Hs.128924	NR_146761	ENSG00000238063	LINC01685	-	long intergenic non-protein coding RNA 1685	ncRNA
14.8333-6	chr16	52671219	52671471	+	0.1	NA	Intergenic	L1MA4A|LINE|L1	-64370	NR_033920	643714	Hs.662199	NR_033920	ENSG00000249231	CASC16	LINC00918	cancer susceptibility 16	ncRNA
10.3333-3	chr19	4231871	4231976	+	0.1	NA	intron (NM_005755, intron 2 of 4)	AluJr|SINE|Alu	2400	NM_005755	10148	Hs.501452	NM_005755	ENSG00000105246	EBI3	IL-27B|IL27B|IL35B	Epstein-Barr virus induced 3	protein-coding
23.1667-4	chr8	131862166	131862441	+	0.1	NA	Intergenic	L2a|LINE|L2	-41790	NR_136615	23167	Hs.204564	NM_015137	ENSG00000132294	EFR3A	-	EFR3 homolog A	protein-coding
30.4667-11	chr8	17078058	17078733	+	0.1	NA	intron (NM_001349810, intron 4 of 14)	intron (NM_001349810, intron 4 of 14)	51157	NM_181723	286097	Hs.403594	NM_181723	ENSG00000155970	MICU3	EFHA2	mitochondrial calcium uptake family member 3	protein-coding
24.4667-5	chr15	73903801	73904270	+	0.1	NA	Intergenic	AluSx3|SINE|Alu	-22427	NM_005576	4016	Hs.65436	NM_005576	ENSG00000129038	LOXL1	LOL|LOXL	lysyl oxidase like 1	protein-coding
17.0333-8	chr8	87700468	87700835	+	0.1	NA	Intergenic	Intergenic	173364	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
34.5-7	chr2	173207148	173207673	+	0.1	NA	intron (NM_133646, intron 9 of 11)	AluSx|SINE|Alu	74626	NR_033882	339751	Hs.570083	NR_033882	ENSG00000238133	MAP3K20-AS1	MLK7-AS1	MAP3K20 antisense RNA 1	ncRNA
18.6333-3	chr1	84892866	84893106	+	0.1	NA	intron (NM_012152, intron 1 of 2)	CpG	220	NM_012152	23566	Hs.527909	NM_012152	ENSG00000171517	LPAR3	EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3	lysophosphatidic acid receptor 3	protein-coding
22.6333-4	chr10	129421491	129421717	+	0.1	NA	Intergenic	Intergenic	-45637	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding
21.5	chr1	72999368	72999778	+	0.1	NA	Intergenic	L1MEh|LINE|L1	-306597	NR_110677	101927295	Hs.436589	NR_110676	ENSG00000233973	LINC01360	-	long intergenic non-protein coding RNA 1360	ncRNA
33.8333-8	chr4	40348051	40348457	+	0.1	NA	intron (NM_017581, intron 3 of 4)	intron (NM_017581, intron 3 of 4)	12921	NM_017581	55584	Hs.272278	NM_017581	ENSG00000174343	CHRNA9	HSA243342|NACHRA9	cholinergic receptor nicotinic alpha 9 subunit	protein-coding
28.0667-10	chr20	35759502	35759924	+	0.1	NA	Intergenic	AluSq|SINE|Alu	-12302	NM_016436	51230	Hs.517044	NM_016436	ENSG00000025293	PHF20	C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP	PHD finger protein 20	protein-coding
18.7333-7	chr13	56423743	56423991	+	0.1	NA	Intergenic	Intergenic	-717051	NM_001130404	729233	Hs.723090	NM_001130404	ENSG00000204918	PRR20B	PRR20|PRR20A|PRR20C|PRR20D|PRR20E	proline rich 20B	protein-coding
17.4667-7	chr16	7829129	7829474	+	0.1	NA	Intergenic	MER1A|DNA|hAT-Charlie	496456	NM_145891	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
42	chr12	129698867	129699583	+	0.1	NA	intron (NM_133448, intron 2 of 8)	intron (NM_133448, intron 2 of 8)	204800	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding
16.9333-11	chr3	11668685	11668952	+	0.1	NA	intron (NM_014667, intron 2 of 5)	L2a|LINE|L2	-24903	NM_001128219	9686	Hs.740389	NM_014667	ENSG00000144560	VGLL4	VGL-4	vestigial like family member 4	protein-coding
9.86666	chr4	65935222	65935405	+	0.1	NA	Intergenic	Intergenic	-264818	NM_001281765	2044	Hs.654492	NM_004439	ENSG00000145242	EPHA5	CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4	EPH receptor A5	protein-coding
20.8667	chr1	224047978	224048409	+	0.1	NA	Intergenic	L1MC1|LINE|L1	55463	NR_136591	100287497	Hs.568390	NR_136590		LOC100287497	-	septin 7 pseudogene	pseudo
23-9	chr5	118995633	118995946	+	0.1	NA	TTS (NR_134249)	TTS (NR_134249)	-7242	NM_173666	285605	Hs.655891	NM_173666	ENSG00000169570	DTWD2	-	DTW domain containing 2	protein-coding
14.4333-6	chr8	143838848	143839058	+	0.1	NA	intron (NM_178564, intron 8 of 17)	intron (NM_178564, intron 8 of 17)	-1137	NR_106904	102466748		NR_106904	ENSG00000284142	MIR6845	hsa-mir-6845	microRNA 6845	ncRNA
21.5667-10	chr6	170076970	170077341	+	0.1	NA	Intergenic	Charlie10|DNA|hAT-Charlie	-83487	NR_125878	102724511	Hs.550045	NR_125878		LOC102724511	-	uncharacterized LOC102724511	ncRNA
39.2333	chr1	190179414	190180011	+	0.1	NA	intron (NM_199051, intron 6 of 7)	intron (NM_199051, intron 6 of 7)	296298	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
35.1667-6	chr18	78236028	78236516	+	0.1	NA	Intergenic	MER101|LTR|ERV1	-242545	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA
16.1333-4	chr14	67596624	67596907	+	0.1	NA	intron (NM_004569, intron 1 of 3)	MER31A|LTR|ERV1	3503	NM_004569	5283	Hs.553497	NM_004569	ENSG00000100564	PIGH	GPI-H	phosphatidylinositol glycan anchor biosynthesis class H	protein-coding
14.3-10	chr5	9906348	9906594	+	0.1	NA	Intergenic	Intergenic	-2647	NR_027112	285692	Hs.651487	NR_027112	ENSG00000249781	LINC02112	-	long intergenic non-protein coding RNA 2112	ncRNA
15.4333-6	chr15	64041216	64041540	+	0.1	NA	intron (NM_014326, intron 1 of 11)	intron (NM_014326, intron 1 of 11)	5107	NM_001363730	23604	Hs.237886	NM_014326	ENSG00000035664	DAPK2	DRP-1|DRP1	death associated protein kinase 2	protein-coding
12.6333-2	chr10	53687201	53687358	+	0.1	NA	Intergenic	AluY|SINE|Alu	-798951	NR_134503	105378311	Hs.623892	NR_134503	ENSG00000234173	LOC105378311	-	uncharacterized LOC105378311	ncRNA
18.1333-2	chr1	217362894	217363124	+	0.1	NA	Intergenic	Intergenic	-225307	NM_001243511	2104	Hs.444225	NM_001438	ENSG00000196482	ESRRG	ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3	estrogen related receptor gamma	protein-coding
12.2667-3	chr3	18555853	18556093	+	0.1	NA	Intergenic	Intergenic	-110381	NM_001322874	6304	Hs.517717	NM_002971	ENSG00000182568	SATB1	-	SATB homeobox 1	protein-coding
12.4-7	chr5	118056948	118057196	+	0.1	NA	intron (NR_104997, intron 2 of 2)	intron (NR_104997, intron 2 of 2)	-225502	NR_104609	100505811	Hs.369776	NR_104609	ENSG00000250427	LINC02148	HNCAT21	long intergenic non-protein coding RNA 2148	ncRNA
46.8667-4	chr8	103266220	103266814	+	0.1	NA	TTS (NR_148214)	TTS (NR_148214)	-31977	NM_001164615	8323	Hs.591863	NM_003506	ENSG00000164930	FZD6	FZ-6|FZ6|HFZ6|NDNC10	frizzled class receptor 6	protein-coding
17.2667-8	chr15	63575815	63576063	+	0.1	NA	intron (NM_001256702, intron 10 of 13)	intron (NM_001256702, intron 10 of 13)	-21448	NM_203373	283807	Hs.631163	NM_203373	ENSG00000197361	FBXL22	Fbl22	F-box and leucine rich repeat protein 22	protein-coding
13.2-8	chr19	27955928	27956133	+	0.1	NA	intron (NR_146733, intron 2 of 6)	intron (NR_146733, intron 2 of 6)	-162090	NR_027301	148189	Hs.706547	NR_027301	ENSG00000261824	LINC00662	-	long intergenic non-protein coding RNA 662	ncRNA
13.1-7	chr5	17768249	17768474	+	0.1	NA	Intergenic	Intergenic	-38913	NR_134286	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
12.9	chr1	80695193	80695433	+	0.1	NA	Intergenic	L1PA8|LINE|L1	54026	NR_125942	101927412	Hs.171273	NR_125940	ENSG00000234184	LINC01781	-	long intergenic non-protein coding RNA 1781	ncRNA
24.2667-5	chr12	2666068	2666551	+	0.1	NA	intron (NM_199460, intron 38 of 49).2	intron (NM_199460, intron 38 of 49).2	5911	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA
21.8333-12	chr5	36253179	36253643	+	0.1	NA	intron (NM_001323279, intron 11 of 12)	intron (NM_001323279, intron 11 of 12)	-11132	NM_001287341	133686	Hs.81907	NM_153013	ENSG00000152620	NADK2	C5orf33|DECRD|MNADK|NADKD1	NAD kinase 2, mitochondrial	protein-coding
12.5667-7	chr3	102502419	102502679	+	0.1	NA	Intergenic	Intergenic	67534	NM_175056	131368	Hs.352213	NM_175056	ENSG00000170044	ZPLD1	-	zona pellucida like domain containing 1	protein-coding
23.7-11	chr6	35575489	35575856	+	0.1	NA	3' UTR (NM_004117, exon 11 of 11)	3' UTR (NM_004117, exon 11 of 11)	-62776	NM_001289395	7287	Hs.485208	NM_003322	ENSG00000112041	TULP1	LCA15|RP14|TUBL1	TUB like protein 1	protein-coding
43.8333-2	chr8	83225315	83225887	+	0.1	NA	Intergenic	Intergenic	-178157	NR_122034	103352670	Hs.399852	NR_122034	ENSG00000253898	LINC01419	LVCAT7|TCONS_00014497	long intergenic non-protein coding RNA 1419	ncRNA
15.6333-4	chr11	115659354	115659510	+	0.1	NA	Intergenic	CpG	75330	NR_135066	101928985	Hs.398155	NR_135066		LOC101928985	-	uncharacterized LOC101928985	ncRNA
27.4333-4	chr12	57412531	57412897	+	0.1	NA	intron (NM_001351204, intron 1 of 25)	intron (NM_001351204, intron 1 of 25)	18329	NM_001351217	22864	Hs.443673	NM_014925	ENSG00000179912	R3HDM2	CAG6|PR01365	R3H domain containing 2	protein-coding
35.1667	chr1	155202991	155203438	+	0.1	NA	intron (NM_001252608, intron 4 of 20)	intron (NM_001252608, intron 4 of 20)	4683	NR_045553	7059	Hs.169875	NM_007112	ENSG00000169231	THBS3	TSP3	thrombospondin 3	protein-coding
29.2667-9	chr3	69685751	69686231	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-53473	NM_001354605	4286	Hs.166017	NM_000248	ENSG00000187098	MITF	CMM8|COMMAD|MI|WS2|WS2A|bHLHe32	melanocyte inducing transcription factor	protein-coding
14.6333-17	chrX	155286631	155286858	+	0.1	NA	intron (NM_001289, intron 3 of 5)	L1PA14|LINE|L1	-22253	NM_171998	116442	Hs.632832	NM_171998	ENSG00000155961	RAB39B	BGMR|MRX72|WSMN|WSN	RAB39B, member RAS oncogene family	protein-coding
7.96667-2	chr3	87170379	87170458	+	0.1	NA	Intergenic	Intergenic	55859	NR_039958	100616161		NR_039958	ENSG00000264119	MIR4795	-	microRNA 4795	ncRNA
18.8-8	chr2	68100312	68100717	+	0.1	NA	Intergenic	L1MB8|LINE|L1	-37510	NM_006333	10438	Hs.602900	NM_006333	ENSG00000197223	C1D	LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D	C1D nuclear receptor corepressor	protein-coding
20.8667-8	chr5	130428765	130429079	+	0.1	NA	Intergenic	L1MC1|LINE|L1	524457	NM_175856	337876	Hs.213137	NM_175856	ENSG00000198108	CHSY3	CHSY2|CSS3	chondroitin sulfate synthase 3	protein-coding
17.5667-12	chr8	138675141	138675369	+	0.1	NA	intron (NM_152888, intron 41 of 64)	intron (NM_152888, intron 41 of 64)	-177525	NM_001362965	51059	Hs.126024	NM_015912	ENSG00000147724	FAM135B	C8ORFK32	family with sequence similarity 135 member B	protein-coding
12.7333-8	chr4	45078133	45078336	+	0.1	NA	Intergenic	L1PA16|LINE|L1	-351600	NR_073095	132789	Hs.21398	NM_138335	ENSG00000163281	GNPDA2	GNP2|SB52	glucosamine-6-phosphate deaminase 2	protein-coding
15.8333-8	chr16	85705711	85705923	+	0.1	NA	Intergenic	LTR16C|LTR|ERVL	-16863	NM_016095	51659	Hs.433180	NM_016095	ENSG00000131153	GINS2	HSPC037|PSF2|Pfs2	GINS complex subunit 2	protein-coding
11.4667-6	chr4	8643959	8644107	+	0.1	NA	Intergenic	Intergenic	51268	NM_001014447	8532	Hs.61995	NM_003652	ENSG00000109625	CPZ	-	carboxypeptidase Z	protein-coding
12.7333-7	chr3	100818953	100819091	+	0.1	NA	intron (NM_001349330, intron 34 of 61)	intron (NM_001349330, intron 34 of 61)	109480	NM_001195478	10342	Hs.518123	NM_006070	ENSG00000114354	TFG	HMSNP|SPG57|TF6|TRKT3	trafficking from ER to golgi regulator	protein-coding
20.2667	chr1	110555852	110556175	+	0.1	NA	Intergenic	MIR|SINE|MIR	-36838	NM_005549	3744	Hs.248140	NM_005549	ENSG00000143105	KCNA10	Kcn1|Kv1.8	potassium voltage-gated channel subfamily A member 10	protein-coding
24.9333-5	chr5	40065034	40065485	+	0.1	NA	Intergenic	Intergenic	12968	NR_104633	102467077	Hs.148993	NR_104633		LINC00603	-	long intergenic non-protein coding RNA 603	ncRNA
26.6333-3	chr12	78396761	78397377	+	0.1	NA	Intergenic	Intergenic	-37323	NR_135021	105369860	Hs.156898	NR_135021	ENSG00000258220	LINC02424	-	long intergenic non-protein coding RNA 2424	ncRNA
14.9333-9	chr16	1989501	1989830	+	0.1	NA	promoter-TSS (NM_004209)	promoter-TSS (NM_004209)	-305	NM_004209	9143	Hs.435277	NM_004209	ENSG00000127561	SYNGR3	-	synaptogyrin 3	protein-coding
14.3667	chr1	81345046	81345251	+	0.1	NA	intron (NM_001366003, intron 2 of 27)	MLT1F1|LTR|ERVL-MaLR	38753	NM_001366008	23266	Hs.24212	NM_012302	ENSG00000117114	ADGRL2	CIRL2|CL2|LEC1|LPHH1|LPHN2	adhesion G protein-coupled receptor L2	protein-coding
27.2333-4	chr2	160487118	160487705	+	0.1	NA	intron (NM_002897, intron 1 of 13)	L2b|LINE|L2	6396	NM_016836	5937	Hs.470412	NM_002897	ENSG00000153250	RBMS1	C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1	RNA binding motif single stranded interacting protein 1	protein-coding
30.2333	chr1	218840837	218841333	+	0.1	NA	intron (NR_031644, intron 6 of 6)	L1ME3B|LINE|L1	77426	NR_146917	105372925	Hs.666318	NR_146917		LINC01710	-	long intergenic non-protein coding RNA 1710	ncRNA
32.9333	chr10	107401745	107402140	+	0.1	NA	Intergenic	L1MA2|LINE|L1	-237236	NM_001206570	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
29.2667-11	chr5	132973385	132973829	+	0.1	NA	Intergenic	AluSz|SINE|Alu	-9973	NM_014423	27125	Hs.519313	NM_014423	ENSG00000072364	AFF4	AF5Q31|CHOPS|MCEF	AF4/FMR2 family member 4	protein-coding
41.0667-6	chr8	128320440	128320950	+	0.1	NA	Intergenic	L2b|LINE|L2	170579	NR_031613	100302281		NR_031613	ENSG00000221261	MIR1208	MIRN1208|hsa-mir-1208	microRNA 1208	ncRNA
43.0333	chr12	6288939	6289656	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-21139	NM_018173	55200	Hs.631660	NM_018173	ENSG00000008323	PLEKHG6	MyoGEF	pleckstrin homology and RhoGEF domain containing G6	protein-coding
23.1-20	chr8	136116852	136117201	+	0.1	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-413772	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
30.8-10	chr5	81537130	81537692	+	0.1	NA	intron (NM_012446, intron 4 of 16)	MamSINE1|SINE|tRNA-RTE	-143277	NM_130767	134526	Hs.591756	NM_130767	ENSG00000172497	ACOT12	CACH-1|Cach|STARD15|THEAL	acyl-CoA thioesterase 12	protein-coding
27.4333-11	chr7	4718094	4718528	+	0.1	NA	intron (NM_001037165, intron 1 of 8)	CpG	36016	NM_001037165	221937	Hs.487393	NM_001037165	ENSG00000164916	FOXK1	FOXK1L	forkhead box K1	protein-coding
24.5333-3	chr13	95095817	95096189	+	0.1	NA	3' UTR (NM_001301830, exon 20 of 20)	3' UTR (NM_001301830, exon 20 of 20)	-114341	NR_145733	109616987		NR_145733		SNORD13G	-	small nucleolar RNA, C/D box 13G	snoRNA
18.2667-8	chr18	21643432	21643614	+	0.1	NA	Intergenic	Intergenic	20691	NM_001308257	171586	Hs.397978	NM_138340	ENSG00000158201	ABHD3	LABH3	abhydrolase domain containing 3	protein-coding
31.5333-6	chr3	114904568	114904931	+	0.1	NA	intron (NM_001348805, intron 3 of 10)	intron (NM_001348805, intron 3 of 10)	-4124	NR_121662	26137	Hs.202577	NM_015642	ENSG00000181722	ZBTB20	DPZF|HOF|ODA-8S|PRIMS|ZNF288	zinc finger and BTB domain containing 20	protein-coding
17.8667-9	chr2	159940138	159940571	+	0.1	NA	3' UTR (NM_001195641, exon 30 of 30)	3' UTR (NM_001195641, exon 30 of 30)	-35598	NM_001198760	100526664	Hs.153563	NM_001198759	ENSG00000248672	LY75-CD302	CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6	LY75-CD302 readthrough	protein-coding
21.3667-2	chr1	15549266	15549774	+	0.1	NA	intron (NR_109898, intron 7 of 14)	MER44A|DNA|TcMar-Tigger	7354	NR_135613	107397391		NR_135613	ENSG00000251866	SCARNA21B	-	small Cajal body-specific RNA 21B	ncRNA
23.3333-4	chr15	100567915	100568198	+	0.1	NA	non-coding (NR_148019, exon 7 of 7)	non-coding (NR_148019, exon 7 of 7)	-8773	NR_073405	441733	Hs.12250	NR_073405		PRKXP1	-	PRKX pseudogene 1	pseudo
29.7	chr1	187891130	187891655	+	0.1	NA	Intergenic	L2a|LINE|L2	447764	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
18.1667-13	chr8	20968330	20968658	+	0.1	NA	intron (NR_130774, intron 4 of 4)	intron (NR_130774, intron 4 of 4)	-5492	NR_033894	286114	Hs.651884	NR_033894	ENSG00000253199	LINC02153	-	long intergenic non-protein coding RNA 2153	ncRNA
23.3667-5	chr17	79027365	79027650	+	0.1	NA	non-coding (NR_040018, exon 1 of 3)	non-coding (NR_040018, exon 1 of 3)	148	NR_040019	100507410	Hs.666723	NR_040018	ENSG00000265096	C1QTNF1-AS1	-	C1QTNF1 antisense RNA 1	ncRNA
30.6333-9	chr4	93413596	93414218	+	0.1	NA	intron (NM_001286838, intron 8 of 14)	intron (NM_001286838, intron 8 of 14)	-414846	NM_005172	474	Hs.532680	NM_005172	ENSG00000172238	ATOH1	ATH1|HATH1|MATH-1|bHLHa14	atonal bHLH transcription factor 1	protein-coding
17.1667-11	chr22	38621032	38621346	+	0.1	NA	intron (NM_001013647, intron 10 of 16)	AluSz|SINE|Alu	35203	NM_001013647	646851	Hs.542707	NM_001013647	ENSG00000184949	FAM227A	-	family with sequence similarity 227 member A	protein-coding
24.2333-5	chr20	6576370	6576897	+	0.1	NA	Intergenic	Intergenic	149901	NR_109953	101929244	Hs.542488	NR_109953	ENSG00000229876	CASC20	-	cancer susceptibility 20	ncRNA
10.2667-2	chr12	4064464	4064668	+	0.1	NA	Intergenic	L1MC1|LINE|L1	-191118	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding
33.7-13	chr5	45272563	45272994	+	0.1	NA	intron (NM_021072, intron 6 of 7)	intron (NM_021072, intron 6 of 7)	423602	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
21.3667-14	chr8	135070541	135071039	+	0.1	NA	Intergenic	MIR|SINE|MIR	-163341	NR_120396	286094	Hs.440978	NR_026706	ENSG00000254083	LINC01591	-	long intergenic non-protein coding RNA 1591	ncRNA
34.0667-9	chr8	132319692	132320365	+	0.1	NA	intron (NM_004519, intron 1 of 14)	(TGAA)n|Simple_repeat|Simple_repeat	127234	NM_001204824	3786	Hs.374023	NM_004519	ENSG00000184156	KCNQ3	BFNC2|EBN2|KV7.3	potassium voltage-gated channel subfamily Q member 3	protein-coding
27.2667-13	chr3	188494638	188494934	+	0.1	NA	intron (NM_001167672, intron 3 of 9)	MIR|SINE|MIR	73880	NR_046623	100873917	Hs.674993	NR_046623	ENSG00000224563	LPP-AS1	-	LPP antisense RNA 1	ncRNA
19.1-12	chr4	183609880	183610122	+	0.1	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	49184	NM_152682	201965	Hs.133337	NM_152682	ENSG00000182552	RWDD4	FAM28A|RWDD4A	RWD domain containing 4	protein-coding
25.9-10	chr5	3072384	3072720	+	0.1	NA	Intergenic	Intergenic	-105283	NR_104617	102467074	Hs.575250	NR_104617	ENSG00000249808	LINC01377	-	long intergenic non-protein coding RNA 1377	ncRNA
32.2-6	chr5	62431560	62432005	+	0.1	NA	intron (NM_001134779, intron 1 of 29)	AluSz6|SINE|Alu	12898	NM_001134779	51194	Hs.482269	NM_016338	ENSG00000086200	IPO11	RanBP11	importin 11	protein-coding
7.16666	chr2	122363300	122363449	+	0.1	NA	Intergenic	L4_B_Mam|LINE|RTE-X	607723	NM_004622	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding
27.6667-7	chr17	53647092	53647509	+	0.1	NA	Intergenic	L1MA1|LINE|L1	-175627	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
33.2333-4	chr2	188049967	188050587	+	0.1	NA	intron (NR_126396, intron 2 of 2)	MLT1A|LTR|ERVL-MaLR	237414	NR_126396	104355152		NR_126396	ENSG00000231689	LINC01090	-	long intergenic non-protein coding RNA 1090	ncRNA
17.5333-13	chr4	117588241	117588588	+	0.1	NA	intron (NR_125757, intron 2 of 3)	intron (NR_125757, intron 2 of 3)	160016	NR_125757	103689918	Hs.582062	NR_125757		LINC01378	-	long intergenic non-protein coding RNA 1378	ncRNA
7.8	chr10	56922368	56922467	+	0.1	NA	Intergenic	Intergenic	382142	NR_037490	100500834		NR_037490	ENSG00000264747	MIR3924	-	microRNA 3924	ncRNA
26.7333-4	chr14	54601330	54601815	+	0.1	NA	intron (NM_015589, intron 1 of 11)	intron (NM_015589, intron 1 of 11)	33960	NM_015589	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding
49.1667-3	chr2	122145973	122146669	+	0.1	NA	Intergenic	Intergenic	390670	NM_004622	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding
23.3667	chr1	21596790	21597095	+	0.1	NA	3' UTR (NM_001350527, exon 27 of 27)	3' UTR (NM_001350527, exon 27 of 27)	45672	NM_001369803	249	Hs.75431	NM_000478	ENSG00000162551	ALPL	AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP	alkaline phosphatase, biomineralization associated	protein-coding
11.6667-10	chr8	73095115	73095267	+	0.1	NA	Intergenic	Intergenic	-2019	NM_153225	157869	Hs.439040	NM_153225	ENSG00000164764	SBSPON	C8orf84|RPESP	somatomedin B and thrombospondin type 1 domain containing	protein-coding
39.0667-2	chr18	66499975	66500480	+	0.1	NA	TTS (NM_021153)	TTS (NM_021153)	103863	NR_073130	28513	Hs.42771	NM_021153	ENSG00000071991	CDH19	CDH7|CDH7L2	cadherin 19	protein-coding
16.1333-11	chr2	121102411	121102684	+	0.1	NA	Intergenic	Intergenic	182655	NM_014553	29842	Hs.156471	NM_014553	ENSG00000115112	TFCP2L1	CRTR1|LBP-9|LBP9	transcription factor CP2 like 1	protein-coding
28.8667-3	chr20	4945034	4945565	+	0.1	NA	intron (NM_005116, intron 2 of 16)	(TTGT)n|Simple_repeat|Simple_repeat	56211	NM_005116	9962	Hs.516866	NM_005116	ENSG00000089057	SLC23A2	NBTL1|SLC23A1|SVCT2|YSPL2	solute carrier family 23 member 2	protein-coding
24.1-7	chr6	138928756	138929264	+	0.1	NA	intron (NM_031922, intron 9 of 19)	intron (NM_031922, intron 9 of 19)	59251	NM_001286611	85021	Hs.334603	NM_031922	ENSG00000135597	REPS1	NBIA7|RALBP1	RALBP1 associated Eps domain containing 1	protein-coding
22.8-19	chr9	104786695	104787093	+	0.1	NA	exon (NM_005502, exon 47 of 50)	exon (NM_005502, exon 47 of 50)	22765	NM_018376	55335	Hs.429294	NM_018376	ENSG00000165028	NIPSNAP3B	FP944|NIPSNAP3|SNAP1	nipsnap homolog 3B	protein-coding
11-5	chr20	53229119	53229284	+	0.1	NA	intron (NM_001193421, intron 1 of 2)	intron (NM_001193421, intron 1 of 2)	43918	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding
23.5-18	chr8	134201998	134202282	+	0.1	NA	Intergenic	MER21C|LTR|ERVL	315644	NR_125424	101927822	Hs.129114	NR_125424	ENSG00000253593	LOC101927822	-	uncharacterized LOC101927822	ncRNA
12.4667	chr14	96882728	96882976	+	0.1	NA	Intergenic	Intergenic	-60727	NR_104113	145249	Hs.592323	NR_104113	ENSG00000225163	LINC00618	C14orf63	long intergenic non-protein coding RNA 618	ncRNA
24.4667-8	chr5	179271338	179271676	+	0.1	NA	intron (NM_014244, intron 3 of 21)	intron (NM_014244, intron 3 of 21)	73954	NM_014244	9509	Hs.23871	NM_014244	ENSG00000087116	ADAMTS2	ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI	ADAM metallopeptidase with thrombospondin type 1 motif 2	protein-coding
22.8667-4	chr5	138946406	138946689	+	0.1	NA	TTS (NM_001037633)	TTS (NM_001037633)	71147	NM_001323988	1495	Hs.445981	NM_001903	ENSG00000044115	CTNNA1	CAP102|MDPT2	catenin alpha 1	protein-coding
23.4667-7	chr4	132902769	132903036	+	0.1	NA	Intergenic	Intergenic	246214	NR_125885	101927359	Hs.649960	NR_125885	ENSG00000250241	LOC101927359	-	uncharacterized LOC101927359	ncRNA
26.4333-12	chr3	182745791	182746317	+	0.1	NA	Intergenic	AluSx4|SINE|Alu	-47450	NM_014616	23200	Hs.478429	NM_014616	ENSG00000058063	ATP11B	ATPIF|ATPIR	ATPase phospholipid transporting 11B (putative)	protein-coding
39.8-5	chr20	47006637	47007287	+	0.1	NA	intron (NM_172110, intron 4 of 13)	AluJb|SINE|Alu	112119	NM_005244	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding
26.2-22	chr8	3666110	3666456	+	0.1	NA	intron (NM_033225, intron 7 of 69)	intron (NM_033225, intron 7 of 69)	-937832	NR_125426	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA
14.2333-16	chr8	85948836	85949101	+	0.1	NA	Intergenic	LTR16B1|LTR|ERVL	120700	NM_033126	85481	Hs.566854	NM_033126	ENSG00000147613	PSKH2	-	protein serine kinase H2	protein-coding
34.2333	chr2	69455360	69455949	+	0.1	NA	Intergenic	LTR78B|LTR|ERV1	-18026	NM_001002756	27247	Hs.430439	NM_015700	ENSG00000169599	NFU1	CGI-33|HIRIP|HIRIP5|MMDS1|NIFUC|Nfu|NifU	NFU1 iron-sulfur cluster scaffold	protein-coding
9.63333-2	chr5	13508969	13509134	+	0.1	NA	Intergenic	Intergenic	435429	NM_001369	1767	Hs.212360	NM_001369	ENSG00000039139	DNAH5	CILD3|DNAHC5|HL1|KTGNR|PCD	dynein axonemal heavy chain 5	protein-coding
37.1667-2	chr3	21376625	21377222	+	0.1	NA	Intergenic	MLT2A2|LTR|ERVL	-28803	NR_002311	391518	Hs.543226	NR_002311		VENTXP7	HPX42|VENTX1	VENT homeobox pseudogene 7	pseudo
28.1-5	chr14	94981643	94982144	+	0.1	NA	Intergenic	MIRb|SINE|MIR	151610	NM_001195573	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2	dicer 1, ribonuclease III	protein-coding
18.2-5	chr11	77261399	77261614	+	0.1	NA	intron (NM_182833, intron 10 of 16)	AluSx1|SINE|Alu	40160	NM_182833	220032	Hs.249795	NM_182833	ENSG00000178795	GDPD4	GDE6	glycerophosphodiester phosphodiesterase domain containing 4	protein-coding
19.2-5	chr15	56529596	56529927	+	0.1	NA	Intergenic	MLT1E1A|LTR|ERVL-MaLR	-64624	NM_018365	55329	Hs.444483	NM_018365	ENSG00000138587	MNS1	SPATA40	meiosis specific nuclear structural 1	protein-coding
12.4333-6	chr20	56207602	56207817	+	0.1	NA	Intergenic	Intergenic	-41023	NM_019888	4159	Hs.248018	NM_019888	ENSG00000124089	MC3R	BMIQ9|MC3|MC3-R|OB20|OQTL	melanocortin 3 receptor	protein-coding
12.5333	chr10	78845928	78846160	+	0.1	NA	Intergenic	Intergenic	221404	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA
28.5667-2	chr10	106730571	106730896	+	0.1	NA	intron (NM_001206569, intron 5 of 25)	intron (NM_001206569, intron 5 of 25)	433973	NM_001206571	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
25.7667-6	chr3	80423876	80424532	+	0.1	NA	Intergenic	Intergenic	-340693	NR_147143	105377175	Hs.180696	NR_147143	ENSG00000242781	LINC02050	-	long intergenic non-protein coding RNA 2050	ncRNA
22.4333-7	chr14	60028552	60028834	+	0.1	NA	intron (NR_075071, intron 28 of 32)	intron (NR_075071, intron 28 of 32)	-63218	NM_022495	64430	Hs.509499	NM_022495	ENSG00000126773	PCNX4	C14orf135|FBP2|PCNXL4	pecanex 4	protein-coding
36.3-9	chr7	83513168	83513737	+	0.1	NA	intron (NM_012431, intron 1 of 16)	intron (NM_012431, intron 1 of 16)	127979	NM_001178129	9723	Hs.440730	NM_012431	ENSG00000170381	SEMA3E	M-SEMAH|M-SemaK|SEMAH|coll-5	semaphorin 3E	protein-coding
17.2667-4	chr1	153063473	153063723	+	0.1	NA	Intergenic	L1M4c|LINE|L1	-6086	NM_005988	6700	Hs.355542	NM_005988	ENSG00000241794	SPRR2A	-	small proline rich protein 2A	protein-coding
29.1667-5	chr2	99324850	99325191	+	0.1	NA	intron (NM_005783, intron 3 of 4)	AluSc|SINE|Alu	11313	NM_005783	10190	Hs.536122	NM_005783	ENSG00000115514	TXNDC9	APACD|PHLP3	thioredoxin domain containing 9	protein-coding
42.5333-4	chr20	56673978	56674443	+	0.1	NA	Intergenic	Intergenic	44904	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding
16.0667-2	chr10	75725819	75726138	+	0.1	NA	intron (NR_132791, intron 1 of 2)	intron (NR_132791, intron 1 of 2)	13523	NR_132791	105378367	Hs.464836	NR_132791		LOC105378367	-	uncharacterized LOC105378367	ncRNA
35.4-7	chr5	125626675	125627172	+	0.1	NA	Intergenic	L1PA5|LINE|L1	133662	NR_109887	101927460	Hs.407582	NR_109887	ENSG00000260192	LINC02240	-	long intergenic non-protein coding RNA 2240	ncRNA
28.9333-4	chr16	68395886	68396248	+	0.1	NA	intron (NM_018667, intron 1 of 8)	intron (NM_018667, intron 1 of 8)	52441	NM_018667	55512	Hs.368421	NM_018667	ENSG00000103056	SMPD3	NSMASE2	sphingomyelin phosphodiesterase 3	protein-coding
26.7667-10	chr2	209038652	209039073	+	0.1	NA	Intergenic	Intergenic	-385185	NM_001039538	4133	Hs.368281	NM_002374	ENSG00000078018	MAP2	MAP-2|MAP2A|MAP2B|MAP2C	microtubule associated protein 2	protein-coding
29.1-10	chr6	92292712	92293196	+	0.1	NA	Intergenic	L1M5|LINE|L1	-602526	NR_104154	101929083	Hs.586238	NR_104154		CASC6	-	cancer susceptibility 6	ncRNA
24.8-5	chr22	28419130	28419610	+	0.1	NA	intron (NM_001145418, intron 2 of 22)	L2c|LINE|L2	-40499	NR_106713	102466081		NR_106713	ENSG00000276162	MIR5739	hsa-mir-5739	microRNA 5739	ncRNA
42.8333-2	chr10	104424235	104424832	+	0.1	NA	intron (NM_001008723, intron 15 of 17)	L2c|LINE|L2	55742	NR_120624	101927523	Hs.407539	NR_120624	ENSG00000225768	LINC02620	-	long intergenic non-protein coding RNA 2620	ncRNA
26.0667-5	chr7	44571349	44571632	+	0.1	NA	intron (NM_019082, intron 6 of 13)	intron (NM_019082, intron 6 of 13)	3048	NM_001257189	54606	Hs.654762	NM_019082	ENSG00000136271	DDX56	DDX21|DDX26|NOH61	DEAD-box helicase 56	protein-coding
18.0667-11	chr3	115695089	115695309	+	0.1	NA	intron (NM_002045, intron 2 of 2)	intron (NM_002045, intron 2 of 2)	71689	NM_002045	2596	Hs.134974	NM_002045	ENSG00000172020	GAP43	B-50|PP46	growth associated protein 43	protein-coding
25.8333-2	chr11	79002657	79003139	+	0.1	NA	intron (NM_001098816, intron 6 of 33)	L1PA13|LINE|L1	399211	NR_030598	100126333		NR_030598	ENSG00000211997	MIR708	MIRN708|hsa-mir-708	microRNA 708	ncRNA
37.0667-5	chr4	58705096	58705672	+	0.1	NA	Intergenic	THE1B-int|LTR|ERVL-MaLR	-169056	NR_133943	105377671	Hs.225045	NR_133943	ENSG00000250340	LINC02494	-	long intergenic non-protein coding RNA 2494	ncRNA
22.7-4	chr2	209622278	209622650	+	0.1	NA	intron (NM_001039538, intron 3 of 14)	MIR|SINE|MIR	42785	NM_002374	4133	Hs.368281	NM_002374	ENSG00000078018	MAP2	MAP-2|MAP2A|MAP2B|MAP2C	microtubule associated protein 2	protein-coding
21.5-10	chr6	169312347	169312661	+	0.1	NA	Intergenic	Intergenic	-58390	NM_003247	7058	Hs.371147	NM_003247	ENSG00000186340	THBS2	TSP2	thrombospondin 2	protein-coding
29.0333-5	chr8	13525898	13526231	+	0.1	NA	intron (NM_001348082, intron 1 of 16)	L1ME1|LINE|L1	-11213	NM_182643	10395	Hs.134296	NM_006094	ENSG00000164741	DLC1	ARHGAP7|HP|STARD12|p122-RhoGAP	DLC1 Rho GTPase activating protein	protein-coding
15.5667-11	chr6	55726291	55726615	+	0.1	NA	Intergenic	MLT1E2|LTR|ERVL-MaLR	-147239	NR_109869	54511	Hs.147054	NM_019036	ENSG00000146151	HMGCLL1	bA418P12.1|er-cHL	3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1	protein-coding
34.2667-7	chr3	38826479	38827079	+	0.1	NA	Intergenic	MER5A|DNA|hAT-Charlie	-32769	NM_001293307	6336	Hs.250443	NM_006514	ENSG00000185313	SCN10A	FEPS2|Nav1.8|PN3|SNS|hPN3	sodium voltage-gated channel alpha subunit 10	protein-coding
36.9667-6	chr8	111982453	111982883	+	0.1	NA	Intergenic	LTR1A2|LTR|ERV1	606029	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
18.6333-13	chr4	32276424	32276619	+	0.1	NA	Intergenic	LTR1E|LTR|ERV1	-74517	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
11.5333-4	chr21	32679231	32679456	+	0.1	NA	intron (NM_001160306, intron 11 of 27)	intron (NM_001160306, intron 11 of 27)	48578	NM_001160306	8867	Hs.473632	NM_003895	ENSG00000159082	SYNJ1	EIEE53|INPP5G|PARK20	synaptojanin 1	protein-coding
39.7667-4	chr17	48391565	48392193	+	0.1	NA	intron (NM_001075099, intron 2 of 12)	intron (NM_001075099, intron 2 of 12)	38335	NM_003726	8631	Hs.316931	NM_003726	ENSG00000141293	SKAP1	HEL-S-81p|SCAP1|SKAP55	src kinase associated phosphoprotein 1	protein-coding
19.9-14	chr4	66598046	66598321	+	0.1	NA	Intergenic	L1MA5|LINE|L1	321359	NR_031673	100302177		NR_031673	ENSG00000221563	MIR1269A	MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a	microRNA 1269a	ncRNA
15.3-3	chr2	20094561	20094818	+	0.1	NA	Intergenic	Intergenic	-43061	NM_014713	9741	Hs.467807	NM_014713	ENSG00000068697	LAPTM4A	HUMORF13|LAPTM4|MBNT|Mtrp	lysosomal protein transmembrane 4 alpha	protein-coding
33.4333-5	chr2	127197604	127198282	+	0.1	NA	intron (NM_001001665, intron 4 of 7)	intron (NM_001001665, intron 4 of 7)	7824	NM_001001665	339761	Hs.407639	NM_001001665	ENSG00000186684	CYP27C1	-	cytochrome P450 family 27 subfamily C member 1	protein-coding
33.8667-3	chr11	77092498	77093113	+	0.1	NA	intron (NM_004055, intron 2 of 12)	AluSx1|SINE|Alu	-10035	NM_006189	4975	Hs.673853	NM_006189	ENSG00000254550	OMP	-	olfactory marker protein	protein-coding
29.3333-5	chr16	19031322	19031747	+	0.1	NA	intron (NM_001324268, intron 6 of 14)	AluSc8|SINE|Alu	35949	NR_119382	102723385	Hs.569608	NR_119379	ENSG00000261465	LOC102723385	-	uncharacterized LOC102723385	ncRNA
10.5	chr1	84075149	84075372	+	0.1	NA	Intergenic	Intergenic	-2715	NM_002731	5567	Hs.487325	NM_002731	ENSG00000142875	PRKACB	PKA C-beta|PKACB	protein kinase cAMP-activated catalytic subunit beta	protein-coding
15.4	chr1	980133	980418	+	0.1	NA	exon (NM_001291367, exon 3 of 5)	exon (NM_001291367, exon 3 of 5)	898	NM_001369898	84808	Hs.271462	NM_032722	ENSG00000187642	PERM1	C1orf170	PPARGC1 and ESRR induced regulator, muscle 1	protein-coding
23.4667-12	chrX	26054916	26055308	+	0.1	NA	Intergenic	Intergenic	-83231	NM_173699	286514	Hs.350683	NM_173699	ENSG00000176774	MAGEB18	-	MAGE family member B18	protein-coding
7.43333	chr2	180578937	180579091	+	0.1	NA	Intergenic	Intergenic	-113090	NR_104322	101669767		NR_104319	ENSG00000281131	SCHLAP1	LINC00913|PCAT11|PCAT114	SWI/SNF complex antagonist associated with prostate cancer 1	ncRNA
43.4333-2	chr11	77630992	77631469	+	0.1	NA	intron (NM_001293, intron 1 of 6)	intron (NM_001293, intron 1 of 6)	6564	NM_001311202	1207	Hs.430733	NM_001293	ENSG00000074201	CLNS1A	CLCI|CLNS1B|ICln	chloride nucleotide-sensitive channel 1A	protein-coding
23.2333-2	chr12	46507784	46508242	+	0.1	NA	intron (NR_125380, intron 3 of 3)	intron (NR_125380, intron 3 of 3)	123906	NR_125381	100288798	Hs.525922	NR_125377		LOC100288798	-	uncharacterized LOC100288798	ncRNA
10.9333-14	chrX	41953293	41953505	+	0.1	NA	Intergenic	MIRc|SINE|MIR	-29845	NM_001367721	8573	Hs.495984	NM_003688	ENSG00000147044	CASK	CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK	calcium/calmodulin dependent serine protein kinase	protein-coding
31.3-3	chr13	62477193	62477856	+	0.1	NA	Intergenic	L1M4c|LINE|L1	153867	NR_047038	100874180	Hs.7415	NR_047038	ENSG00000229307	LINC00459	-	long intergenic non-protein coding RNA 459	ncRNA
32.5333	chr1	166920546	166920893	+	0.1	NA	exon (NM_199351, exon 9 of 10)	exon (NM_199351, exon 9 of 10)	-44455	NM_053053	117143	Hs.435967	NM_053053	ENSG00000152382	TADA1	ADA1|HFI1|STAF42|TADA1L|hADA1	transcriptional adaptor 1	protein-coding
17.9333-9	chr21	20328990	20329207	+	0.1	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-70413	NR_151724	111216285	Hs.561034	NR_151724		LINC02573	-	long intergenic non-protein coding RNA 2573	ncRNA
21.9667-5	chr2	55803140	55803404	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-109428	NM_033109	87178	Hs.388733	NM_033109	ENSG00000138035	PNPT1	COXPD13|DFNB70|OLD35|PNPASE|old-35	polyribonucleotide nucleotidyltransferase 1	protein-coding
17.3333-9	chr6	87218924	87219288	+	0.1	NA	intron (NM_015021, intron 4 of 7)	intron (NM_015021, intron 4 of 7)	63541	NM_001351444	23036	Hs.444800	NM_015021	ENSG00000188994	ZNF292	Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3	zinc finger protein 292	protein-coding
15.1333-7	chr16	24105975	24106278	+	0.1	NA	intron (NM_002738, intron 7 of 16)	(A)n|Simple_repeat|Simple_repeat	-96990	NR_106996	102466247		NR_106996	ENSG00000274466	MIR1273H	hsa-mir-1273h	microRNA 1273h	ncRNA
17.4667-8	chr16	86766709	86767032	+	0.1	NA	Intergenic	L1PA16|LINE|L1	44779	NR_135182	102724344	Hs.585769	NR_135182	ENSG00000261175	LINC02188	-	long intergenic non-protein coding RNA 2188	ncRNA
17-13	chrX	108566296	108566471	+	0.1	NA	intron (NM_033380, intron 4 of 50)	L1MC5a|LINE|L1	126545	NM_000495	1287	Hs.369089	NM_000495	ENSG00000188153	COL4A5	ASLN|ATS|ATS1|CA54	collagen type IV alpha 5 chain	protein-coding
46.6667-2	chr16	62699768	62700583	+	0.1	NA	Intergenic	L2c|LINE|L2	-663737	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
19-2	chr11	73047417	73047753	+	0.1	NA	intron (NM_014824, intron 3 of 19)	intron (NM_014824, intron 3 of 19)	94733	NM_014824	9873	Hs.744959	NM_014824	ENSG00000137478	FCHSD2	NWK|NWK1|SH3MD3	FCH and double SH3 domains 2	protein-coding
20.8333-12	chr4	30733842	30734194	+	0.1	NA	intron (NM_032457, intron 1 of 2)	intron (NM_032457, intron 1 of 2)	13649	NM_032456	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
27.7-11	chr3	38345208	38345593	+	0.1	NA	Intergenic	AluSp|SINE|Alu	-1360	NM_001349179	9942	Hs.659985	NM_005108	ENSG00000093217	XYLB	-	xylulokinase	protein-coding
18.3333-14	chr8	101809078	101809317	+	0.1	NA	intron (NM_001040628, intron 4 of 7)	intron (NM_001040628, intron 4 of 7)	-18228	NM_032041	83988	Hs.492427	NM_032041	ENSG00000104490	NCALD	-	neurocalcin delta	protein-coding
28.2-10	chr2	107722830	107723115	+	0.1	NA	Intergenic	Intergenic	-31140	NR_126370	104326057	Hs.585967	NR_126369	ENSG00000232991	GACAT1	LINC00876	gastric cancer associated transcript 1	ncRNA
39.4667	chr12	68057695	68058250	+	0.1	NA	Intergenic	THE1B|LTR|ERVL-MaLR	68527	NR_104125	100885789	Hs.439832	NR_104124	ENSG00000255733	IFNG-AS1	GS1-410F4.2|NEST|Tmevpg1	IFNG antisense RNA 1	ncRNA
38.6667-2	chr10	854925	855683	+	0.1	NA	intron (NM_001351277, intron 5 of 17)	Tigger1|DNA|TcMar-Tigger	76401	NM_015155	23185	Hs.159069	NM_015155	ENSG00000107929	LARP4B	KIAA0217|LARP5	La ribonucleoprotein domain family member 4B	protein-coding
39.3333	chr15	75536407	75536827	+	0.1	NA	intron (NM_002833, intron 1 of 12)	L2c|LINE|L2	42698	NM_002833	5780	Hs.445775	NM_002833	ENSG00000169410	PTPN9	MEG2|PTPMEG2	protein tyrosine phosphatase non-receptor type 9	protein-coding
20.6667-8	chr14	101624416	101624772	+	0.1	NA	Intergenic	Intergenic	63243	NM_001362	1735	Hs.49322	NM_001362	ENSG00000197406	DIO3	5DIII|D3|DIOIII|TXDI3	iodothyronine deiodinase 3	protein-coding
13.4-7	chr3	13973389	13973575	+	0.1	NA	intron (NR_002223, intron 1 of 2)	L1PBa|LINE|L1	36175	NR_002223	348825	Hs.529180	NR_002223	ENSG00000180438	TPRXL	TPRX3P	tetrapeptide repeat homeobox like	pseudo
13.0333-3	chr4	87113012	87113282	+	0.1	NA	intron (NM_005935, intron 10 of 19)	intron (NM_005935, intron 10 of 19)	106146	NM_005935	4299	Hs.480190	NM_005935	ENSG00000172493	AFF1	AF4|MLLT2|PBM1	AF4/FMR2 family member 1	protein-coding
21.9-16	chr8	141680477	141680921	+	0.1	NA	Intergenic	Intergenic	105614	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA
29.4333-2	chr12	23138969	23139530	+	0.1	NA	Intergenic	Intergenic	-36387	NR_120471	101928441	Hs.129111	NR_120471	ENSG00000256321	LOC101928441	-	uncharacterized LOC101928441	ncRNA
40.3-6	chr2	150418206	150418827	+	0.1	NA	Intergenic	Intergenic	69179	NM_001254738	390	Hs.6838	NM_005168	ENSG00000115963	RND3	ARHE|Rho8|RhoE|memB	Rho family GTPase 3	protein-coding
23.9333	chr1	41557792	41558065	+	0.1	NA	intron (NM_024503, intron 5 of 8)	intron (NM_024503, intron 5 of 8)	-73245	NM_001302269	1907	Hs.1407	NM_001956	ENSG00000127129	EDN2	ET-2|ET2|PPET2	endothelin 2	protein-coding
26.2-6	chr12	16110767	16111169	+	0.1	NA	Intergenic	Intergenic	166717	NM_001170798	729025	Hs.692712	NM_001170798	ENSG00000188991	SLC15A5	-	solute carrier family 15 member 5	protein-coding
19.2-7	chr17	10926811	10927051	+	0.1	NA	Intergenic	Intergenic	-88844	NM_001101387	644139	Hs.553909	NM_001101387	ENSG00000233670	PIRT	-	phosphoinositide interacting regulator of transient receptor potential channels	protein-coding
13.5-2	chr10	113399951	113400146	+	0.1	NA	Intergenic	MIR|SINE|MIR	-150783	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding
35.1	chr1	80980515	80981046	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-325412	NM_001366003	23266	Hs.24212	NM_012302	ENSG00000117114	ADGRL2	CIRL2|CL2|LEC1|LPHH1|LPHN2	adhesion G protein-coupled receptor L2	protein-coding
6.76667-2	chr14	95196939	95197030	+	0.1	NA	intron (NM_024734, intron 9 of 12)	MIRc|SINE|MIR	-38974	NM_030621	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2	dicer 1, ribonuclease III	protein-coding
31.8333	chr2	61855568	61856000	+	0.1	NA	Intergenic	MER63C|DNA|hAT-Blackjack	-1724	NR_037710	84140	Hs.440466	NM_032180	ENSG00000170264	FAM161A	RP28	FAM161 centrosomal protein A	protein-coding
34.9667-3	chr4	138703838	138704356	+	0.1	NA	Intergenic	AluSx3|SINE|Alu	308549	NR_133945	105377448	Hs.200280	NR_133945	ENSG00000250195	LOC105377448	-	uncharacterized LOC105377448	ncRNA
5.76667-3	chr21	39145317	39145401	+	0.1	NA	Intergenic	L2a|LINE|L2	38092	NM_003720	8624	Hs.473838	NM_003720	ENSG00000183527	PSMG1	C21LRP|DSCR2|LRPC21|PAC-1|PAC1	proteasome assembly chaperone 1	protein-coding
13.3667-11	chr4	73534542	73534696	+	0.1	NA	Intergenic	Intergenic	25816	NR_046377	728040	Hs.640574	NR_046377	ENSG00000250436	LINC02499	-	long intergenic non-protein coding RNA 2499	ncRNA
8.36667-6	chr5	30870459	30870542	+	0.1	NA	Intergenic	L2b|LINE|L2	-323186	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
18.0667-6	chr2	169170559	169170780	+	0.1	NA	intron (NM_004525, intron 58 of 78)	intron (NM_004525, intron 58 of 78)	89562	NM_001142271	10170	Hs.179608	NM_005771	ENSG00000073737	DHRS9	3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4	dehydrogenase/reductase 9	protein-coding
22.7667-18	chr9	65436639	65437010	+	0.1	NA	Intergenic	L1MEf|LINE|L1	-151615	NM_001126334	653427	Hs.714683	NM_001126334	ENSG00000204779	FOXD4L5	bA15J10.2	forkhead box D4 like 5	protein-coding
33.2-5	chr12	52253446	52253979	+	0.1	NA	non-coding (NR_146088, exon 5 of 9)	non-coding (NR_146088, exon 5 of 9)	4796	NR_146088	85349	Hs.584773	NR_146088	ENSG00000135477	KRT87P	HBD|KRT121P|KRTHBP4|psihHbD	keratin 87 pseudogene	pseudo
30.7-3	chr13	37481255	37481659	+	0.1	NA	TTS (NR_125762)	TTS (NR_125762)	3327	NR_125762	103695431	Hs.550637	NR_125762	ENSG00000230390	LINC01048	-	long intergenic non-protein coding RNA 1048	ncRNA
14.7333-9	chr5	85072062	85072286	+	0.1	NA	Intergenic	Intergenic	-687294	NM_005711	10085	Hs.482730	NM_005711	ENSG00000164176	EDIL3	DEL1	EGF like repeats and discoidin domains 3	protein-coding
31.3-7	chr20	3286372	3286792	+	0.1	NA	intron (NM_001009984, intron 27 of 36)	intron (NM_001009984, intron 27 of 36)	-47392	NM_001174089	83959	Hs.105607	NM_032034	ENSG00000088836	SLC4A11	BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2	solute carrier family 4 member 11	protein-coding
21.1-11	chr6	162546757	162547237	+	0.1	NA	intron (NM_004562, intron 1 of 11)	intron (NM_004562, intron 1 of 11)	-180135	NM_152410	135138	Hs.25791	NM_152410	ENSG00000112530	PACRG	GLUP|HAK005771|PACRG2.1|PARK2CRG	parkin coregulated	protein-coding
22.1-10	chr5	78801052	78801555	+	0.1	NA	intron (NM_000046, intron 6 of 7)	intron (NM_000046, intron 6 of 7)	-152531	NM_005779	10184	Hs.79299	NM_005779	ENSG00000145685	LHFPL2	-	LHFPL tetraspan subfamily member 2	protein-coding
11.5-15	chr9	21388188	21388418	+	0.1	NA	Intergenic	L1M1|LINE|L1	-2905	NM_000605	3440	Hs.211575	NM_000605	ENSG00000188379	IFNA2	IFN-alphaA|IFNA|IFNA2B|INFA2	interferon alpha 2	protein-coding
39.1667-5	chr5	146769413	146770102	+	0.1	NA	intron (NM_001271899, intron 2 of 9)	L2c|LINE|L2	109028	NM_181675	5521	Hs.627618	NM_181674	ENSG00000156475	PPP2R2B	B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12	protein phosphatase 2 regulatory subunit Bbeta	protein-coding
17.4667-13	chr8	59664287	59664698	+	0.1	NA	Intergenic	Tigger7|DNA|TcMar-Tigger	545282	NR_149031	100505501		NR_149030		LOC100505501	-	uncharacterized LOC100505501	ncRNA
14.8667-3	chr12	8683349	8683676	+	0.1	NA	intron (NR_123740, intron 1 of 8)	L1MC|LINE|L1	1835	NM_001352267	57494	Hs.504670	NM_020734	ENSG00000166532	RIMKLB	FAM80B|NAAGS|NAAGS-I	ribosomal modification protein rimK like family member B	protein-coding
16.3-9	chr3	101066839	101067095	+	0.1	NA	Intergenic	Intergenic	-73477	NM_001349330	25890	Hs.477015	NM_015429	ENSG00000154175	ABI3BP	NESHBP|TARSH	ABI family member 3 binding protein	protein-coding
25.1667-4	chr7	8692107	8692587	+	0.1	NA	intron (NM_152745, intron 2 of 2)	L2a|LINE|L2	258738	NM_152745	30010	Hs.487564	NM_152745	ENSG00000122584	NXPH1	NPH1|Nbla00697	neurexophilin 1	protein-coding
15.9667-7	chr18	32225872	32226043	+	0.1	NA	Intergenic	L1MD1|LINE|L1	35918	NM_001308171	4225	Hs.194777	NM_005925	ENSG00000141434	MEP1B	-	meprin A subunit beta	protein-coding
15.9333-12	chrX	100431032	100431274	+	0.1	NA	Intergenic	Intergenic	-20880	NM_001105243	57526	Hs.4993	NM_020766	ENSG00000165194	PCDH19	EFMR|EIEE9	protocadherin 19	protein-coding
20-9	chr5	163191662	163191932	+	0.1	NA	Intergenic	Intergenic	-245774	NM_001364019	900	Hs.79101	NM_004060	ENSG00000113328	CCNG1	CCNG	cyclin G1	protein-coding
24.1333-6	chr18	64260800	64261211	+	0.1	NA	promoter-TSS (NR_033983)	promoter-TSS (NR_033983)	-950	NR_033983	400654	Hs.434235	NR_033983	ENSG00000266952	LINC01538	-	long intergenic non-protein coding RNA 1538	ncRNA
14.0333	chr10	28762050	28762204	+	0.1	NA	intron (NR_120652, intron 2 of 3)	intron (NR_120652, intron 2 of 3)	18477	NR_120652	101929218	Hs.224866	NR_120652		LINC01517	-	long intergenic non-protein coding RNA 1517	ncRNA
13.1667-10	chr5	67106557	67106760	+	0.1	NA	intron (NM_001297651, intron 7 of 25)	L2|LINE|L2	90141	NM_005582	4064	Hs.87205	NM_005582	ENSG00000134061	CD180	LY64|Ly78|RP105	CD180 molecule	protein-coding
24.5-2	chr11	34711950	34712485	+	0.1	NA	Intergenic	MSTA|LTR|ERVL-MaLR	79651	NM_001206616	26298	Hs.653859	NM_012153	ENSG00000135373	EHF	ESE3|ESE3B|ESEJ	ETS homologous factor	protein-coding
25.1667-3	chr3	150081329	150081891	+	0.1	NA	Intergenic	MIR|SINE|MIR	-14833	NR_136187	105374313	Hs.151216	NR_136187		LOC105374313	-	uncharacterized LOC105374313	ncRNA
30.5-12	chr3	159936114	159936450	+	0.1	NA	intron (NR_108088, intron 9 of 9)	intron (NR_108088, intron 9 of 9)	-52553	NM_001354583	3592	Hs.673	NM_000882	ENSG00000168811	IL12A	CLMF|IL-12A|NFSK|NKSF1|P35	interleukin 12A	protein-coding
11.5667-9	chr8	18128365	18128481	+	0.1	NA	Intergenic	L1M1|LINE|L1	-42044	NM_001160179	9	Hs.591847	NM_000662	ENSG00000171428	NAT1	AAC1|MNAT|NAT-1|NATI	N-acetyltransferase 1	protein-coding
35.5333-2	chr10	133096562	133097213	+	0.1	NA	intron (NM_001083909, intron 2 of 6)	intron (NM_001083909, intron 2 of 6)	-5359	NM_001291085	84435	Hs.435183	NM_032422	ENSG00000197177	ADGRA1	GPR123	adhesion G protein-coupled receptor A1	protein-coding
23.5667-4	chr17	57434640	57435041	+	0.1	NA	intron (NM_001322250, intron 6 of 13)	L1MA7|LINE|L1	88757	NR_110808	101927557	Hs.639984	NR_110808	ENSG00000266100	LOC101927557	-	uncharacterized LOC101927557	ncRNA
10.8333-4	chr2	21701089	21701201	+	0.1	NA	intron (NR_038837, intron 2 of 2)	L2|LINE|L2	9507	NR_038837	645949	Hs.456782	NR_038837	ENSG00000229621	LINC01822	-	long intergenic non-protein coding RNA 1822	ncRNA
17.5667-2	chr11	111575969	111576256	+	0.1	NA	Intergenic	Intergenic	-26337	NM_015191	23235	Hs.269128	NM_015191	ENSG00000170145	SIK2	LOH11CR1I|QIK|SIK-2|SNF1LK2	salt inducible kinase 2	protein-coding
43.0333-2	chr14	80285123	80285675	+	0.1	NA	intron (NR_038355, intron 2 of 8)	L1MA1|LINE|L1	-54342	NM_000793	1734	Hs.202354	NM_000793	ENSG00000211448	DIO2	5DII|D2|DIOII|SelY|TXDI2	iodothyronine deiodinase 2	protein-coding
22.4667-2	chr1	101660061	101660362	+	0.1	NA	Intergenic	L1MA9|LINE|L1	186869	NR_110212	118427	Hs.484475	NM_058170	ENSG00000118733	OLFM3	NOE3|NOELIN3|OPTIMEDIN	olfactomedin 3	protein-coding
32.4-2	chr13	91485782	91486228	+	0.1	NA	intron (NM_004466, intron 2 of 7)	LTR24|LTR|ERV1	87384	NM_004466	2262	Hs.655675	NM_004466	ENSG00000179399	GPC5	-	glypican 5	protein-coding
19.3667-10	chr9	90279137	90279381	+	0.1	NA	Intergenic	L1MCa|LINE|L1	154230	NR_109795	101927873	Hs.598482	NR_109795	ENSG00000231107	LINC01508	-	long intergenic non-protein coding RNA 1508	ncRNA
25.6333-5	chr16	72900928	72901483	+	0.1	NA	intron (NM_001164766, intron 2 of 8)	intron (NM_001164766, intron 2 of 8)	146923	NM_006885	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding
42.0667-3	chr14	26370180	26370714	+	0.1	NA	Intergenic	Intergenic	182983	NM_001366398	4857	Hs.31588	NM_002515	ENSG00000139910	NOVA1	Nova-1	NOVA alternative splicing regulator 1	protein-coding
25.9667-11	chr5	113207424	113207862	+	0.1	NA	intron (NM_001085377, intron 3 of 18)	intron (NM_001085377, intron 3 of 18)	87295	NM_002387	4163	Hs.593171	NM_002387	ENSG00000171444	MCC	MCC1	MCC regulator of WNT signaling pathway	protein-coding
18.0667-7	chr3	8007930	8008279	+	0.1	NA	intron (NR_110131, intron 1 of 3)	intron (NR_110131, intron 1 of 3)	8203	NR_110131	101927394	Hs.517767	NR_110131	ENSG00000227110	LOC101927394	-	uncharacterized LOC101927394	ncRNA
31.5667-8	chr8	140212826	140213237	+	0.1	NA	intron (NM_001160372, intron 17 of 22)	AluSc|SINE|Alu	-112496	NR_144431	359809	Hs.26814	NR_144431	ENSG00000282164	PEG13	-	paternally expressed 13	ncRNA
24.3-13	chr5	16105793	16106113	+	0.1	NA	intron (NM_001102562, intron 2 of 3)	intron (NM_001102562, intron 2 of 3)	73838	NM_001102562	441061	Hs.662216	NM_001102562	ENSG00000183654	MARCH11	MARCH-XI|RNF226	membrane associated ring-CH-type finger 11	protein-coding
22-3	chr15	34154914	34155387	+	0.1	NA	intron (NM_024713, intron 2 of 9)	LTR10A|LTR|ERV1	53067	NM_152595	161779	Hs.156317	NM_152595	ENSG00000182405	PGBD4	-	piggyBac transposable element derived 4	protein-coding
39.9667-2	chr15	96274152	96274716	+	0.1	NA	intron (NR_102743, intron 5 of 7)	L1MC4a|LINE|L1	-51612	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding
21.1667-5	chr12	16637814	16638196	+	0.1	NA	Intergenic	Intergenic	-29791	NR_045014	55885	Hs.504908	NM_018640	ENSG00000048540	LMO3	RBTN3|RBTNL2|RHOM3|Rhom-3	LIM domain only 3	protein-coding
14-14	chr8	17525503	17525816	+	0.1	NA	intron (NM_001370338, intron 2 of 12)	intron (NM_001370338, intron 2 of 12)	-13118	NM_003046	6542	Hs.448520	NM_003046	ENSG00000003989	SLC7A2	ATRC2|CAT2|HCAT2	solute carrier family 7 member 2	protein-coding
27.1333-6	chr11	112125355	112125742	+	0.1	NA	Intergenic	Intergenic	38546	NM_001562	3606	Hs.83077	NM_001562	ENSG00000150782	IL18	IGIF|IL-18|IL-1g|IL1F4	interleukin 18	protein-coding
37.0333-3	chr8	123383311	123383967	+	0.1	NA	intron (NM_014109, intron 1 of 27)	AluSp|SINE|Alu	12808	NM_014109	29028	Hs.370834	NM_014109	ENSG00000156802	ATAD2	ANCCA|CT137|PRO2000	ATPase family AAA domain containing 2	protein-coding
14.6667-7	chr8	114517491	114517735	+	0.1	NA	Intergenic	Intergenic	-1080674	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
14.0667-4	chr15	33844561	33844761	+	0.1	NA	intron (NM_001243996, intron 91 of 102)	intron (NM_001243996, intron 91 of 102)	-123836	NM_012125	1133	Hs.584747	NM_012125	ENSG00000184984	CHRM5	HM5	cholinergic receptor muscarinic 5	protein-coding
42.5333-3	chr20	21953691	21954169	+	0.1	NA	Intergenic	L1MA4A|LINE|L1	-100160	NR_038394	100270679	Hs.385748	NR_038394	ENSG00000234435	LINC01432	-	long intergenic non-protein coding RNA 1432	ncRNA
54.7667	chr3	2686055	2686837	+	0.1	NA	intron (NM_175607, intron 4 of 24)	L3|LINE|CR1	-205769	NM_175613	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
11.9333-2	chr14	78761796	78761936	+	0.1	NA	intron (NR_073547, intron 8 of 20)	intron (NR_073547, intron 8 of 20)	358147	NM_004796	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
18.8667-12	chr8	50317798	50318219	+	0.1	NA	intron (NR_135797, intron 2 of 20)	AluY|SINE|Alu	153877	NM_001321778	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
28.4667	chr10	68780000	68780446	+	0.1	NA	intron (NR_104262, intron 18 of 23)	AluJr|SINE|Alu	25051	NR_003076	692211		NR_003076	ENSG00000283551	SNORD98	HBII-419	small nucleolar RNA, C/D box 98	snoRNA
19.4-14	chr7	43615133	43615489	+	0.1	NA	intron (NR_135582, intron 6 of 6)	AluJb|SINE|Alu	32203	NM_004760	9263	Hs.709489	NM_004760	ENSG00000164543	STK17A	DRAK1	serine/threonine kinase 17a	protein-coding
23.6333-11	chr6	41919056	41919524	+	0.1	NA	intron (NR_131160, intron 1 of 2)	intron (NR_131160, intron 1 of 2)	1653	NM_001305456	9477	Hs.278434	NM_004275	ENSG00000124641	MED20	PRO0213|SRB2|TRFP	mediator complex subunit 20	protein-coding
12.8333-7	chr20	62910236	62910432	+	0.1	NA	intron (NM_022105, intron 3 of 5)	intron (NM_022105, intron 3 of 5)	16171	NM_001193370	11083	Hs.517172	NM_022105	ENSG00000101191	DIDO1	BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8	death inducer-obliterator 1	protein-coding
26.7333-12	chr6	123410520	123410917	+	0.1	NA	intron (NM_001251987, intron 12 of 20)	intron (NM_001251987, intron 12 of 20)	-28886	NR_110844	101927990	Hs.660877	NR_110844		TRDN-AS1	HRAT13	TRDN antisense RNA 1	ncRNA
25.1333-2	chr1	79918889	79919408	+	0.1	NA	Intergenic	Intergenic	-616607	NR_125941	101927412	Hs.171273	NR_125940	ENSG00000234184	LINC01781	-	long intergenic non-protein coding RNA 1781	ncRNA
42.9667-2	chr18	77723568	77723998	+	0.1	NA	Intergenic	L1PB4|LINE|L1	269944	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA
15.7667-7	chr20	62129358	62129668	+	0.1	NA	intron (NM_144703, intron 3 of 8)	intron (NM_144703, intron 3 of 8)	7038	NM_144703	149986	Hs.105379	NM_144703	ENSG00000149657	LSM14B	C20orf40|FAM61B|FT005|LSM13|RAP55B|bA11M20.3	LSM family member 14B	protein-coding
10.3333-6	chr5	144202935	144203102	+	0.1	NA	intron (NM_020768, intron 2 of 3)	Charlie4z|DNA|hAT-Charlie	-2373	NM_001370487	57528	Hs.7093	NM_020768	ENSG00000183775	KCTD16	-	potassium channel tetramerization domain containing 16	protein-coding
31.4-18	chr5	107130517	107131169	+	0.1	NA	Intergenic	Intergenic	-119829	NR_104671	102467213	Hs.570923	NR_104671	ENSG00000251027	LINC01950	-	long intergenic non-protein coding RNA 1950	ncRNA
27.4667-5	chr13	62981717	62982082	+	0.1	NA	Intergenic	Intergenic	-174540	NR_120403	100874176	Hs.402083	NR_047029		LINC00448	-	long intergenic non-protein coding RNA 448	ncRNA
19.0667-3	chr14	57191186	57191637	+	0.1	NA	Intergenic	Intergenic	77494	NM_006544	10640	Hs.743987	NM_006544	ENSG00000070367	EXOC5	HSEC10|PRO1912|SEC10|SEC10L1|SEC10P	exocyst complex component 5	protein-coding
32.0333	chr1	209274859	209275369	+	0.1	NA	Intergenic	L1PA17|LINE|L1	-50342	NR_135085	105372897	Hs.116154	NR_135085	ENSG00000227940	LINC01696	-	long intergenic non-protein coding RNA 1696	ncRNA
20.4-14	chr7	1089116	1089378	+	0.1	NA	intron (NM_001098201, intron 1 of 1)	intron (NM_001098201, intron 1 of 1)	1134	NM_001098201	2852	Hs.20961	NM_001505	ENSG00000164850	GPER1	CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER	G protein-coupled estrogen receptor 1	protein-coding
14.7667-4	chr5	112546752	112546955	+	0.1	NA	Intergenic	Intergenic	-81583	NR_104672	102467214	Hs.124613	NR_104672		LINC02200	-	long intergenic non-protein coding RNA 2200	ncRNA
21.7-9	chr3	192632427	192632730	+	0.1	NA	intron (NM_004113, intron 2 of 5)	intron (NM_004113, intron 2 of 5)	94963	NM_004113	2257	Hs.390250	NM_004113	ENSG00000114279	FGF12	EIEE47|FGF12B|FHF1	fibroblast growth factor 12	protein-coding
12.1-7	chr17	7671001	7671199	+	0.1	NA	intron (NM_001126118, intron 8 of 9)	AluSx|SINE|Alu	4144	NM_001276697	7157	Hs.437460	NM_000546	ENSG00000141510	TP53	BCC7|BMFS5|LFS1|P53|TRP53	tumor protein p53	protein-coding
30.9	chr1	189573660	189574082	+	0.1	NA	Intergenic	Intergenic	902139	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
32.8667-7	chr8	140209759	140210107	+	0.1	NA	intron (NM_001160372, intron 17 of 22)	MIRb|SINE|MIR	-109398	NR_144431	359809	Hs.26814	NR_144431	ENSG00000282164	PEG13	-	paternally expressed 13	ncRNA
25.1667-6	chrX	91388624	91389196	+	0.1	NA	Intergenic	L1MA3|LINE|L1	-45929	NM_080832	140886	Hs.246590	NM_080832	ENSG00000174740	PABPC5	PABP5	poly(A) binding protein cytoplasmic 5	protein-coding
54.1	chr5	28462088	28462865	+	0.1	NA	Intergenic	Intergenic	-174811	NR_134265	105374698	Hs.124461	NR_134265	ENSG00000249785	LINC02103	-	long intergenic non-protein coding RNA 2103	ncRNA
16.1333-8	chr19	46015640	46015889	+	0.1	NA	intron (NM_001267723, intron 7 of 13)	CpG-14744	-3168	NR_030412	768217		NR_030412	ENSG00000211580	MIR769	MIRN769|hsa-mir-769|mir-769	microRNA 769	ncRNA
19.8667-5	chr2	75757482	75757833	+	0.1	NA	Intergenic	Intergenic	-46742	NM_001201335	6936	Hs.303808	NM_003203	ENSG00000005436	GCFC2	C2orf3|DNABF|GCF|TCF9	GC-rich sequence DNA-binding factor 2	protein-coding
38.3333-3	chr14	86023063	86023523	+	0.1	NA	intron (NR_110155, intron 1 of 3)	THE1B|LTR|ERVL-MaLR	88615	NR_110155	101928767	Hs.536380	NR_110155		LINC02328	-	long intergenic non-protein coding RNA 2328	ncRNA
25.6667-11	chr7	140189326	140189667	+	0.1	NA	Intergenic	Intergenic	12235	NR_024451	100134229	Hs.634333	NR_024451	ENSG00000260231	KDM7A-DT	JHDM1D-AS1	KDM7A divergent transcript	ncRNA
17.1333-19	chr5	137750166	137750595	+	0.1	NA	3' UTR (NM_006805, exon 1 of 1)	3' UTR (NM_006805, exon 1 of 1)	3983	NM_006805	10949	Hs.96996	NM_006805	ENSG00000177733	HNRNPA0	HNRPA0	heterogeneous nuclear ribonucleoprotein A0	protein-coding
28.1-2	chr11	58131580	58132034	+	0.1	NA	intron (NM_001005212, intron 2 of 2)	intron (NM_001005212, intron 2 of 2)	-12363	NM_001005211	219954	Hs.632122	NM_001005211	ENSG00000172377	OR9I1	OR11-228	olfactory receptor family 9 subfamily I member 1	protein-coding
14.0667-5	chr15	36263799	36264066	+	0.1	NA	Intergenic	Intergenic	-315694	NM_001321757	84529	Hs.48348	NM_032499	ENSG00000186073	C15orf41	HH114	chromosome 15 open reading frame 41	protein-coding
17.8-23	chr8	138382148	138382524	+	0.1	NA	intron (NM_001362965, intron 1 of 19)	intron (NM_001362965, intron 1 of 19)	114925	NM_015912	51059	Hs.126024	NM_015912	ENSG00000147724	FAM135B	C8ORFK32	family with sequence similarity 135 member B	protein-coding
26.1333-3	chr12	50413167	50413571	+	0.1	NA	intron (NM_001352310, intron 2 of 16)	MER21B|LTR|ERVL	11962	NM_001352314	113251	Hs.26613	NM_052879	ENSG00000161813	LARP4	PP13296	La ribonucleoprotein domain family member 4	protein-coding
17.1-13	chr21	29933338	29933654	+	0.1	NA	intron (NM_000830, intron 1 of 16)	MER103C|DNA|hAT-Charlie	6500	NM_001320616	2897	Hs.664641	NM_000830	ENSG00000171189	GRIK1	EAA3|EEA3|GLR5|GLUR5|GluK1|gluR-5	glutamate ionotropic receptor kainate type subunit 1	protein-coding
13.3667-14	chr7	29327460	29327718	+	0.1	NA	intron (NM_001293070, intron 2 of 13)	intron (NM_001293070, intron 2 of 13)	-118619	NR_120522	102724484	Hs.638665	NR_120522		LOC102724484	-	uncharacterized LOC102724484	ncRNA
17.4-9	chr4	60708310	60708691	+	0.1	NA	Intergenic	L2a|LINE|L2	-214119	NR_039652	100616450		NR_039652	ENSG00000265829	MIR548AG1	-	microRNA 548ag-1	ncRNA
27.0667-8	chr3	167306753	167307132	+	0.1	NA	intron (NM_001199202, intron 16 of 20)	intron (NM_001199202, intron 16 of 20)	73341	NM_001199202	79740	Hs.478143	NM_024687	ENSG00000169064	ZBBX	-	zinc finger B-box domain containing	protein-coding
20.3-6	chr19	27595912	27596340	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	-197305	NR_110691	101927151	Hs.567934	NR_110687	ENSG00000267575	LOC101927151	-	uncharacterized LOC101927151	ncRNA
22.0667-2	chr10	113352092	113352394	+	0.1	NA	Intergenic	Intergenic	-198588	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding
29.0333-2	chr1	60981732	60982406	+	0.1	NA	Intergenic	AluSc5|SINE|Alu	-11293	NR_110617	100996570	Hs.46616	NR_110617	ENSG00000237928	NFIA-AS2	-	NFIA antisense RNA 2	ncRNA
34.6667	chr1	4656476	4657224	+	0.1	NA	intron (NM_018836, intron 1 of 5)	intron (NM_018836, intron 1 of 5)	2241	NM_001042478	55966	Hs.12473	NM_018836	ENSG00000196581	AJAP1	MOT8|SHREW-1|SHREW1	adherens junctions associated protein 1	protein-coding
11.4667-9	chr9	31479661	31479805	+	0.1	NA	Intergenic	Intergenic	-98243	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
27.2333	chr10	24389690	24390177	+	0.1	NA	intron (NM_019590, intron 3 of 20)	intron (NM_019590, intron 3 of 20)	-59481	NM_001321681	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	ETL4|SKT	KIAA1217	protein-coding
30.4667-10	chr7	54440785	54441340	+	0.1	NA	Intergenic	L1MD1|LINE|L1	-101263	NM_001301009	222008	Hs.335933	NM_182546	ENSG00000170419	VSTM2A	VSTM2	V-set and transmembrane domain containing 2A	protein-coding
28.0667-11	chr5	56551806	56552213	+	0.1	NA	intron (NR_161255, intron 2 of 5)	MIR3|SINE|MIR	54247	NR_161255	101928448	Hs.208052	NM_001287053	ENSG00000225940	C5orf67	-	chromosome 5 open reading frame 67	ncRNA
28.3333-11	chr22	37916863	37917229	+	0.1	NA	intron (NM_033386, intron 3 of 15)	AluSz|SINE|Alu	10749	NM_033386	85377	Hs.517610	NM_033386	ENSG00000100139	MICALL1	MICAL-L1|MIRAB13	MICAL like 1	protein-coding
16.6333-6	chr3	21388358	21388726	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-17184	NR_002311	391518	Hs.543226	NR_002311		VENTXP7	HPX42|VENTX1	VENT homeobox pseudogene 7	pseudo
38.4-9	chr3	94424708	94425242	+	0.1	NA	Intergenic	L1PA6|LINE|L1	361914	NM_022072	63899	Hs.436594	NM_022072	ENSG00000178694	NSUN3	MST077|MSTP077	NOP2/Sun RNA methyltransferase 3	protein-coding
19.4333-4	chr2	62198391	62198656	+	0.1	NA	intron (NM_006577, intron 1 of 1)	intron (NM_006577, intron 1 of 1)	2408	NM_006577	10678	Hs.173203	NM_006577	ENSG00000170340	B3GNT2	3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
39.6333-5	chr8	81881223	81881627	+	0.1	NA	Intergenic	Intergenic	-39139	NM_022133	64089	Hs.492121	NM_022133	ENSG00000104497	SNX16	-	sorting nexin 16	protein-coding
20.1-4	chr14	64631039	64631412	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-73199	NM_001308147	26030	Hs.509637	NM_015549	ENSG00000126822	PLEKHG3	ARHGEF43|KIAA0599	pleckstrin homology and RhoGEF domain containing G3	protein-coding
39.3333-4	chr20	46234768	46235278	+	0.1	NA	intron (NM_021248, intron 3 of 11)	intron (NM_021248, intron 3 of 11)	73475	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding
36.3-5	chr14	70485601	70486371	+	0.1	NA	Intergenic	L1MA6|LINE|L1	-2230	NR_037933	317760	Hs.188369	NR_037933	ENSG00000259158	ADAM20P1	C14orf55	ADAM metallopeptidase domain 20 pseudogene 1	pseudo
12-4	chr4	168892188	168892363	+	0.1	NA	intron (NM_001367567, intron 2 of 11)	intron (NM_001367567, intron 2 of 11)	60180	NM_001367569	23022	Hs.151220	NM_016081	ENSG00000129116	PALLD	CGI-151|CGI151|MYN|PNCA1|SIH002	palladin, cytoskeletal associated protein	protein-coding
22.9333-12	chr5	43690226	43690575	+	0.1	NA	intron (NM_012343, intron 19 of 21)	intron (NM_012343, intron 19 of 21)	-87170	NR_073113	100652772	Hs.482043	NR_073113		NNT-AS1	-	NNT antisense RNA 1	ncRNA
17.2333-8	chr3	176353116	176353376	+	0.1	NA	Intergenic	L1ME3A|LINE|L1	108695	NR_031687	100302204		NR_031687	ENSG00000221737	MIR548I1	MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1	microRNA 548i-1	ncRNA
18.5333-16	chr2	240899772	240900093	+	0.1	NA	Intergenic	MER53|DNA|hAT	-3776	NM_001085437	79919	Hs.193745	NM_024861	ENSG00000172478	MAB21L4	C2orf54	mab-21 like 4	protein-coding
17.3333-7	chr3	165734773	165734984	+	0.1	NA	Intergenic	L1M2|LINE|L1	102545	NR_137636	590	Hs.420483	NM_000055	ENSG00000114200	BCHE	BCHED|CHE1|CHE2|E1	butyrylcholinesterase	protein-coding
34.1333-7	chr6	55044306	55044762	+	0.1	NA	Intergenic	L2b|LINE|L2	-61926	NM_001526	3062	Hs.151624	NM_001526	ENSG00000137252	HCRTR2	OX2R	hypocretin receptor 2	protein-coding
43.3333-3	chr16	6466765	6467501	+	0.1	NA	intron (NM_018723, intron 2 of 15)	intron (NM_018723, intron 2 of 15)	-306676	NM_001142334	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
33.8-5	chr7	63199058	63199534	+	0.1	NA	Intergenic	Tigger2|DNA|TcMar-Tigger	104760	NR_003952	643955	Hs.583308	NR_003952	ENSG00000185037	ZNF733P	ZNF733	zinc finger protein 733, pseudogene	pseudo
30.7667-6	chr17	10957101	10957508	+	0.1	NA	Intergenic	L4_A_Mam|LINE|RTE-X	-119217	NM_001101387	644139	Hs.553909	NM_001101387	ENSG00000233670	PIRT	-	phosphoinositide interacting regulator of transient receptor potential channels	protein-coding
32.4667-7	chr9	33021400	33021891	+	0.1	NA	intron (NM_001368996, intron 1 of 7)	AluJo|SINE|Alu	3475	NR_160925	54840	Hs.20158	NM_017692	ENSG00000137074	APTX	AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT	aprataxin	protein-coding
22.3333-14	chr5	114395599	114395879	+	0.1	NA	intron (NM_001278204, intron 2 of 6)	intron (NM_001278204, intron 2 of 6)	33420	NM_001278204	3781	Hs.98280	NM_021614	ENSG00000080709	KCNN2	KCa2.2|SK2|SKCA2|SKCa 2|hSK2	potassium calcium-activated channel subfamily N member 2	protein-coding
23.6667-5	chr2	125290303	125290802	+	0.1	NA	Intergenic	Intergenic	827433	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
24.2667-4	chr11	95727644	95728057	+	0.1	NA	Intergenic	Intergenic	61932	NM_001330357	143684	Hs.288304	NM_144664	ENSG00000077458	FAM76B	-	family with sequence similarity 76 member B	protein-coding
22.4-9	chr17	54343064	54343437	+	0.1	NA	Intergenic	L1ME3G|LINE|L1	520323	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
49.7333-4	chr5	79737516	79738016	+	0.1	NA	exon (NM_153610, exon 2 of 13)	exon (NM_153610, exon 2 of 13)	47930	NM_153610	202333	Hs.482625	NM_153610	ENSG00000164309	CMYA5	C5orf10|SPRYD2|TRIM76	cardiomyopathy associated 5	protein-coding
16-4	chr5	13788819	13789012	+	0.1	NA	intron (NM_001369, intron 50 of 78)	intron (NM_001369, intron 50 of 78)	155565	NM_001369	1767	Hs.212360	NM_001369	ENSG00000039139	DNAH5	CILD3|DNAHC5|HL1|KTGNR|PCD	dynein axonemal heavy chain 5	protein-coding
34.8-8	chr21	25000662	25001103	+	0.1	NA	intron (NR_046198, intron 2 of 3)	intron (NR_046198, intron 2 of 3)	160332	NR_046198	339622	Hs.616316	NR_046198	ENSG00000226983	LINC01692	-	long intergenic non-protein coding RNA 1692	ncRNA
31.9667-2	chr7	21722881	21723339	+	0.1	NA	intron (NM_001277115, intron 44 of 81)	intron (NM_001277115, intron 44 of 81)	180071	NM_001277115	8701	Hs.520245	NM_001277115	ENSG00000105877	DNAH11	CILD7|DNAHBL|DNAHC11|DNHBL|DPL11	dynein axonemal heavy chain 11	protein-coding
38.9667	chr1	85238464	85239084	+	0.1	NA	Intergenic	L1MC4a|LINE|L1	20888	NR_024113	148423	Hs.26226	NM_198077	ENSG00000162642	C1orf52	gm117	chromosome 1 open reading frame 52	protein-coding
13.2-5	chr17	45013445	45013591	+	0.1	NA	Intergenic	Intergenic	38114	NM_001128631	79877	Hs.463148	NM_024819	ENSG00000172992	DCAKD	-	dephospho-CoA kinase domain containing	protein-coding
33.0667-4	chr8	101832085	101832764	+	0.1	NA	intron (NM_001040628, intron 4 of 7)	intron (NM_001040628, intron 4 of 7)	-41455	NM_032041	83988	Hs.492427	NM_032041	ENSG00000104490	NCALD	-	neurocalcin delta	protein-coding
35.3667-4	chr6	119971639	119972419	+	0.1	NA	Intergenic	L1MC1|LINE|L1	-43150	NR_036098	100422951		NR_036098	ENSG00000265725	MIR3144	mir-3144	microRNA 3144	ncRNA
16.5-2	chr12	24676830	24677028	+	0.1	NA	Intergenic	MLT1A1|LTR|ERVL-MaLR	-92761	NR_029451	144360	Hs.350668	NM_144667	ENSG00000197503	LINC00477	C12orf67|FAM191B	long intergenic non-protein coding RNA 477	ncRNA
14.9333-10	chr17	81365237	81365531	+	0.1	NA	Intergenic	Intergenic	19741	NM_001347841	100130370	Hs.646594	NM_001272086		LOC100130370	-	uncharacterized LOC100130370	protein-coding
15.2667-11	chr6	65367985	65368146	+	0.1	NA	intron (NM_198283, intron 7 of 9)	THE1C|LTR|ERVL-MaLR	66647	NM_001271675	441155	Hs.546686	NM_001271675		LOC441155	-	zinc finger CCCH-type domain-containing-like	protein-coding
37.2333-3	chr9	90591353	90591973	+	0.1	NA	Intergenic	L1MD2|LINE|L1	-8917	NR_034157	340515	Hs.522284	NM_001105317		LINC01501	-	long intergenic non-protein coding RNA 1501	ncRNA
33.6333	chr10	24787863	24788276	+	0.1	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	-64182	NM_020824	57584	Hs.524195	NM_020824	ENSG00000107863	ARHGAP21	ARHGAP10	Rho GTPase activating protein 21	protein-coding
11.8667-2	chr17	27885755	27885957	+	0.1	NA	intron (NM_001076680, intron 1 of 3)	MLT1K|LTR|ERVL-MaLR	7509	NM_001076680	201229	Hs.687951	NM_001076680	ENSG00000232859	LYRM9	C17orf108|HSD24	LYR motif containing 9	protein-coding
18.0333-3	chr13	113049059	113049353	+	0.1	NA	intron (NM_001366646, intron 2 of 27)	intron (NM_001366646, intron 2 of 27)	4560	NM_001366646	23263	Hs.170422	NM_024979	ENSG00000126217	MCF2L	ARHGEF14|DBS|OST	MCF.2 cell line derived transforming sequence like	protein-coding
26.5333-2	chr10	112004332	112004826	+	0.1	NA	Intergenic	L2b|LINE|L2	179186	NM_020918	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
22.1667	chr11	76717163	76717564	+	0.1	NA	intron (NR_024042, intron 3 of 20)	L2a|LINE|L2	4426	NR_024042	390226	Hs.440026	NR_024042		GUCY2EP	GC-E|GCD|GUCY2E	guanylate cyclase 2E, pseudogene	pseudo
23.6-14	chr3	197173272	197173661	+	0.1	NA	intron (NM_001290983, intron 5 of 25)	MIR|SINE|MIR	10406	NM_001366221	1739	Hs.292549	NM_004087	ENSG00000075711	DLG1	DLGH1|SAP-97|SAP97|hdlg	discs large MAGUK scaffold protein 1	protein-coding
34.6667-9	chr19	44854000	44854571	+	0.1	NA	intron (NM_001042724, intron 1 of 8)	AluSz|SINE|Alu	7988	NM_001042724	5819	Hs.655455	NM_002856	ENSG00000130202	NECTIN2	CD112|HVEB|PRR2|PVRL2|PVRR2	nectin cell adhesion molecule 2	protein-coding
17.5-9	chr3	37800692	37801047	+	0.1	NA	intron (NR_110532, intron 4 of 5)	L1ME3A|LINE|L1	60911	NR_110532	101928153	Hs.657314	NR_110531	ENSG00000235257	ITGA9-AS1	-	ITGA9 antisense RNA 1	ncRNA
16.7333-3	chr12	18730762	18731040	+	0.1	NA	intron (NM_001330774, intron 3 of 14)	intron (NM_001330774, intron 3 of 14)	6608	NM_001330769	89869	Hs.97542	NM_033123	ENSG00000139151	PLCZ1	NYD-SP27|PLC-zeta-1|PLCzeta|SPGF17	phospholipase C zeta 1	protein-coding
21-4	chr2	54639572	54639862	+	0.1	NA	intron (NM_178313, intron 17 of 30)	intron (NM_178313, intron 17 of 30)	81323	NM_178313	6711	Hs.503178	NM_003128	ENSG00000115306	SPTBN1	ELF|HEL102|SPTB2|betaSpII	spectrin beta, non-erythrocytic 1	protein-coding
42.7-3	chr11	14695354	14695852	+	0.1	NA	intron (NM_000922, intron 1 of 15)	L1PA10|LINE|L1	51799	NM_000922	5140	Hs.445711	NM_000922	ENSG00000152270	PDE3B	HcGIP1|cGIPDE1	phosphodiesterase 3B	protein-coding
13.8333-2	chr10	118365341	118365638	+	0.1	NA	Intergenic	L1MEb|LINE|L1	8381	NR_108045	100506126	Hs.69494	NR_108045	ENSG00000232139	LINC00867	-	long intergenic non-protein coding RNA 867	ncRNA
16.8667-3	chr1	187478545	187478809	+	0.1	NA	Intergenic	LTR81B|LTR|Gypsy	35049	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
35.2333	chr14	64388587	64389188	+	0.1	NA	intron (NM_005956, intron 1 of 27)	MIR3|SINE|MIR	534	NM_005956	4522	Hs.652308	NM_005956	ENSG00000100714	MTHFD1	CIMAH|MTHFC|MTHFD	methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1	protein-coding
44.6667-2	chr8	24183344	24184140	+	0.1	NA	Intergenic	AluSx4|SINE|Alu	-110298	NR_130709	10863	Hs.174030	NM_014265	ENSG00000042980	ADAM28	ADAM 28|MDC-L|MDCL|eMDC II|eMDCII	ADAM metallopeptidase domain 28	protein-coding
22.9667-6	chr15	58618595	58619019	+	0.1	NA	intron (NM_001320570, intron 10 of 14)	L1MA4|LINE|L1	74800	NR_073415	664618	Hs.670224	NR_002927		HSP90AB4P	HSP90Bd	heat shock protein 90 alpha family class B member 4, pseudogene	pseudo
26.4667-3	chr22	26186117	26186404	+	0.1	NA	intron (NM_001184776, intron 1 of 14)	intron (NM_001184776, intron 1 of 14)	16786	NM_001184775	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding
19.6-3	chr14	56258609	56258946	+	0.1	NA	intron (NM_021255, intron 2 of 5)	L1ME1|LINE|L1	140366	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding
19.6333-4	chr15	63309076	63309450	+	0.1	NA	TTS (NM_001145646)	TTS (NM_001145646)	31658	NM_031301	83464	Hs.511703	NM_031301	ENSG00000138613	APH1B	APH-1B|PRO1328|PSFL|TAAV688	aph-1 homolog B, gamma-secretase subunit	protein-coding
17.7333-12	chr5	31215972	31216149	+	0.1	NA	intron (NM_001362435, intron 1 of 10)	intron (NM_001362435, intron 1 of 10)	22374	NM_001362435	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
9.93333	chr5	3200769	3200938	+	0.1	NA	Intergenic	Intergenic	23018	NR_104617	102467074	Hs.575250	NR_104617	ENSG00000249808	LINC01377	-	long intergenic non-protein coding RNA 1377	ncRNA
17.7667-11	chr8	109577091	109577420	+	0.1	NA	intron (NM_001099754, intron 6 of 6)	intron (NM_001099754, intron 6 of 6)	26204	NM_001363032	55638	Hs.390738	NM_017786	ENSG00000147642	SYBU	GOLSYN|OCSYN|SNPHL	syntabulin	protein-coding
10.3667-8	chr6	142472524	142472721	+	0.1	NA	Intergenic	L1M3|LINE|L1	165214	NR_027311	153910	Hs.350819	NR_027311	ENSG00000236366	LOC153910	-	uncharacterized LOC153910	ncRNA
37-9	chr8	60473596	60474287	+	0.1	NA	Intergenic	Intergenic	-42969	NM_001242644	5862	Hs.369017	NM_002865	ENSG00000104388	RAB2A	LHX|RAB2	RAB2A, member RAS oncogene family	protein-coding
9.93334-2	chr4	177070780	177070904	+	0.1	NA	Intergenic	Intergenic	195140	NR_149104	105377556		NR_149104	ENSG00000250263	LINC02509	-	long intergenic non-protein coding RNA 2509	ncRNA
18.7667-2	chr1	195688778	195689100	+	0.1	NA	Intergenic	Intergenic	399776	NR_146895	105371673		NR_146895		LINC01724	-	long intergenic non-protein coding RNA 1724	ncRNA
17	chr10	56035494	56035748	+	0.1	NA	Intergenic	MER61D|LTR|ERV1	325638	NM_007057	11130	Hs.591363	NM_007057	ENSG00000122952	ZWINT	HZwint-1|KNTC2AP|SIP30|ZWINT1	ZW10 interacting kinetochore protein	protein-coding
24.2333-3	chr15	27225228	27225513	+	0.1	NA	intron (NM_001270873, intron 3 of 5)	intron (NM_001270873, intron 3 of 5)	-64051	NR_120343	101928869	Hs.585699	NR_120343	ENSG00000228740	GABRG3-AS1	-	GABRG3 antisense RNA 1	ncRNA
17.7667-2	chr11	54881200	54881458	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	174497	NM_001005272	81318	Hs.554531	NM_001005272	ENSG00000221840	OR4A5	OR11-111	olfactory receptor family 4 subfamily A member 5	protein-coding
32.7-4	chr17	74918384	74918809	+	0.1	NA	intron (NM_173477, intron 2 of 2)	AluSz|SINE|Alu	4659	NM_173477	124590	Hs.376688	NM_173477	ENSG00000182040	USH1G	ANKS4A|SANS	USH1 protein network component sans	protein-coding
49.9667-2	chr4	43135869	43136443	+	0.1	NA	Intergenic	Intergenic	242890	NM_001080476	389207	Hs.162559	NM_001080476	ENSG00000215203	GRXCR1	DFNB25|PPP1R88	glutaredoxin and cysteine rich domain containing 1	protein-coding
18.8333-10	chr3	8207045	8207298	+	0.1	NA	Intergenic	Intergenic	-190864	NR_110131	101927394	Hs.517767	NR_110131	ENSG00000227110	LOC101927394	-	uncharacterized LOC101927394	ncRNA
31.8-10	chr4	180598269	180598736	+	0.1	NA	Intergenic	Intergenic	560647	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
17.8-14	chr4	61534814	61535107	+	0.1	NA	intron (NM_001371343, intron 4 of 23)	L1PA17|LINE|L1	332788	NM_001371342								
13.3333-10	chr2	3585919	3586091	+	0.1	NA	Intergenic	Intergenic	-8827	NM_024027	78989	Hs.32603	NM_024027	ENSG00000118004	COLEC11	3MC2|CL-K1-I|CL-K1-II|CL-K1-IIa|CL-K1-IIb|CLK1	collectin subfamily member 11	protein-coding
17.7333-21	chrX	51953426	51953758	+	0.1	NA	Intergenic	L2a|LINE|L2	59969	NM_006986	9500	Hs.5258	NM_006986	ENSG00000179222	MAGED1	DLXIN-1|NRAGE	MAGE family member D1	protein-coding
22.9667-4	chr11	88730871	88731293	+	0.1	NA	intron (NM_001143831, intron 2 of 8)	intron (NM_001143831, intron 2 of 8)	226506	NR_049724	100873989	Hs.616625	NR_049724	ENSG00000255082	GRM5-AS1	-	GRM5 antisense RNA 1	ncRNA
33.7-15	chr8	86226135	86226791	+	0.1	NA	intron (NM_138817, intron 1 of 3)	L2|LINE|L2	3918	NM_138817	157724	Hs.149095	NM_138817	ENSG00000164893	SLC7A13	AGT-1|AGT1|XAT2	solute carrier family 7 member 13	protein-coding
25.2333-4	chr12	121053619	121054027	+	0.1	NA	Intergenic	Intergenic	-14581	NM_003733	8638	Hs.118633	NM_003733	ENSG00000135114	OASL	OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL	2'-5'-oligoadenylate synthetase like	protein-coding
28-6	chr2	177006002	177006416	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	206202	NR_157853	105373759		NR_157853		LOC105373759	-	uncharacterized LOC105373759	ncRNA
34.6667-7	chr18	7227733	7228213	+	0.1	NA	Intergenic	Intergenic	-3131	NM_001105581	339291	Hs.647588	NM_001105581	ENSG00000206422	LRRC30	-	leucine rich repeat containing 30	protein-coding
22.6333-13	chr3	22294596	22295170	+	0.1	NA	Intergenic	Intergenic	337744	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
17.7333-2	chr1	186653914	186654203	+	0.1	NA	Intergenic	AluJr|SINE|Alu	26365	NM_000963	5743	Hs.196384	NM_000963	ENSG00000073756	PTGS2	COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2	prostaglandin-endoperoxide synthase 2	protein-coding
22.3-8	chr5	110686350	110686722	+	0.1	NA	intron (NM_001039763, intron 1 of 13)	MLT1G1|LTR|ERVL-MaLR	40135	NM_001039763	642987	Hs.729154	NM_001039763	ENSG00000186952	TMEM232	-	transmembrane protein 232	protein-coding
34.2667-3	chr10	54605842	54606273	+	0.1	NA	non-coding (NR_134503, exon 3 of 6)	non-coding (NR_134503, exon 3 of 6)	1900	NR_031642	100302192		NR_031642	ENSG00000221594	MIR548F1	MIR548F-1|MIRN548F1|hsa-mir-548f-1	microRNA 548f-1	ncRNA
32.2333-4	chr16	17059448	17060011	+	0.1	NA	Intergenic	AluJo|SINE|Alu	-74775	NR_135179	102723692	Hs.737758	NR_135179	ENSG00000261448	LOC102723692	-	uncharacterized LOC102723692	ncRNA
26.9-3	chr11	18962868	18963147	+	0.1	NA	Intergenic	AluSx|SINE|Alu	-28005	NM_147199	259249	Hs.711459	NM_147199	ENSG00000170255	MRGPRX1	GPCR|MGRG2|MRGX1|SNSR4	MAS related GPR family member X1	protein-coding
11.5667-5	chr4	139759255	139759489	+	0.1	NA	intron (NM_018717, intron 2 of 4)	intron (NM_018717, intron 2 of 4)	93553	NM_001204368	4258	Hs.81874	NM_002413	ENSG00000085871	MGST2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
29.7-10	chr2	224344402	224344855	+	0.1	NA	Intergenic	MSTA|LTR|ERVL-MaLR	57366	NM_024785	79843	Hs.147585	NM_024785	ENSG00000124019	FAM124B	-	family with sequence similarity 124 member B	protein-coding
11.4333-4	chr7	11715289	11715444	+	0.1	NA	intron (NM_015204, intron 1 of 26)	intron (NM_015204, intron 1 of 26)	116832	NM_015204	221981	Hs.120855	NM_015204	ENSG00000005108	THSD7A	-	thrombospondin type 1 domain containing 7A	protein-coding
20.7333-10	chr17	40830207	40830562	+	0.1	NA	intron (NR_160886, intron 1 of 2)	L1MA3|LINE|L1	-7770	NM_000421	3858	Hs.99936	NM_000421	ENSG00000186395	KRT10	BCIE|BIE|CK10|EHK|K10|KPP	keratin 10	protein-coding
20.3667-6	chr22	45491241	45491720	+	0.1	NA	Intergenic	AluSc|SINE|Alu	-11403	NM_006487	2192	Hs.24601	NM_001996	ENSG00000077942	FBLN1	FBLN|FIBL1	fibulin 1	protein-coding
23.7333-4	chr2	79235544	79236023	+	0.1	NA	Intergenic	L1PA16|LINE|L1	-76030	NM_138937	5068	Hs.567312	NM_002580	ENSG00000172016	REG3A	HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3	regenerating family member 3 alpha	protein-coding
28.5667-9	chr19	49745472	49745943	+	0.1	NA	intron (NM_021733, intron 6 of 10)	intron (NM_021733, intron 6 of 10)	17599	NM_021733	60385	Hs.515858	NM_021733	ENSG00000126467	TSKS	PPP1R161|STK22S1|TSKS1|TSSKS	testis specific serine kinase substrate	protein-coding
25.1666-4	chr5	82673462	82674088	+	0.1	NA	Intergenic	Intergenic	-166380	NR_039773	100616297		NR_039773	ENSG00000283359	MIR3977	-	microRNA 3977	ncRNA
10.1333-2	chr1	218446185	218446325	+	0.1	NA	intron (NR_031644, intron 2 of 6)	intron (NR_031644, intron 2 of 6)	3629	NR_125715	103611157	Hs.133379	NR_125715	ENSG00000281453	TGFB2-OT1	-	TGFB2 overlapping transcript 1	ncRNA
26.8-20	chr9	92256805	92257231	+	0.1	NA	intron (NR_073446, intron 18 of 32)	intron (NR_073446, intron 18 of 32)	35529	NR_037424	100500918		NR_037424	ENSG00000281156	MIR3651	mir-3651	microRNA 3651	ncRNA
13.3333-7	chr15	23862571	23862708	+	0.1	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-112508	NR_126392	105370731	Hs.532639	NR_126392		PWRN4	LINC01084	Prader-Willi region non-protein coding RNA 4	ncRNA
20.3	chr13	46088612	46089106	+	0.1	NA	intron (NM_001872, intron 1 of 10)	L1ME3E|LINE|L1	16174	NM_001872	1361	Hs.512937	NM_001872	ENSG00000080618	CPB2	CPU|PCPB|TAFI	carboxypeptidase B2	protein-coding
15.2333-3	chr14	69816150	69816393	+	0.1	NA	TTS (NR_149012)	TTS (NR_149012)	4511	NR_149012	100506358		NR_149012		LOC100506358	-	uncharacterized LOC100506358	ncRNA
37.6	chr11	29843294	29843879	+	0.1	NA	Intergenic	L2b|LINE|L2	138807	NR_132652	106456574	Hs.128812	NR_132652	ENSG00000261340	LINC01616	n341006	long intergenic non-protein coding RNA 1616	ncRNA
13.3333-16	chr6	158858395	158858602	+	0.1	NA	promoter-TSS (NR_028496)	promoter-TSS (NR_028496)	-866	NR_028496	202459	Hs.487035	NM_145303	ENSG00000243775	OSTCP1	DC2L|OSTCL	oligosaccharyltransferase complex subunit pseudogene 1	pseudo
22.7667-17	chr8	33479867	33480385	+	0.1	NA	Intergenic	Intergenic	-5056	NM_032509	84549	Hs.583805	NM_032509	ENSG00000198042	MAK16	MAK16L|RBM13	MAK16 homolog	protein-coding
13.8333-8	chr7	32439351	32439504	+	0.1	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	-11203	NM_001322059	5137	Hs.143821	NM_005020	ENSG00000154678	PDE1C	DFNA74|Hcam3|cam-PDE 1C|hCam-3	phosphodiesterase 1C	protein-coding
23.9-7	chr5	35953821	35954149	+	0.1	NA	3' UTR (NM_152404, exon 7 of 7)	3' UTR (NM_152404, exon 7 of 7)	15184	NR_104630	100506406	Hs.116864	NR_104630	ENSG00000249748	LOC100506406	-	uncharacterized LOC100506406	ncRNA
34.3333-10	chr6	26035723	26036362	+	0.1	NA	Intergenic	Intergenic	-2474	NM_003513	8335	Hs.248174	NM_003513	ENSG00000278463	HIST1H2AB	H2A/m|H2AFM	histone cluster 1 H2A family member b	protein-coding
17.6667-2	chr13	38323219	38323433	+	0.1	NA	Intergenic	L4_C_Mam|LINE|RTE-X	-26525	NM_001286703	51569	Hs.643655	NM_016617	ENSG00000120686	UFM1	BM-002|C13orf20|HLD14	ubiquitin fold modifier 1	protein-coding
20.5	chr1	114356542	114356974	+	0.1	NA	Intergenic	AluSz6|SINE|Alu	154445	NM_033020	51592	Hs.26837	NM_015906	ENSG00000197323	TRIM33	ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA	tripartite motif containing 33	protein-coding
12.8333-2	chr10	24234128	24234356	+	0.1	NA	intron (NM_019590, intron 2 of 20)	Tigger4a|DNA|TcMar-Tigger	25104	NM_019590	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	ETL4|SKT	KIAA1217	protein-coding
16.8667-7	chr20	37186300	37186608	+	0.1	NA	intron (NM_001324306, intron 2 of 15)	intron (NM_001324306, intron 2 of 15)	-6906	NM_152503	140699	Hs.349125	NM_152503	ENSG00000101353	MROH8	C20orf131|C20orf132	maestro heat like repeat family member 8	protein-coding
13.3667-7	chr16	56338808	56338974	+	0.1	NA	intron (NM_020988, intron 6 of 8)	intron (NM_020988, intron 6 of 8)	86098	NM_001323511	267	Hs.295137	NM_001144	ENSG00000159461	AMFR	GP78|RNF45	autocrine motility factor receptor	protein-coding
21.7667-3	chr16	35481383	35481741	+	0.1	NA	promoter-TSS (NR_026980)	promoter-TSS (NR_026980)	-966	NR_026980	146481	Hs.316564	NR_026980		FRG2DP	-	FSHD region gene 2 family member D, pseudogene	pseudo
21.6-3	chr10	124464653	124464943	+	0.1	NA	intron (NM_001318332, intron 1 of 5)	L1ME4b|LINE|L1	2975	NM_022126	64077	Hs.527748	NM_022126	ENSG00000107902	LHPP	HDHD2B	phospholysine phosphohistidine inorganic pyrophosphate phosphatase	protein-coding
6.46667	chr18	10063465	10063529	+	0.1	NA	Intergenic	L1MEc|LINE|L1	149481	NM_194434	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding
14.1	chr10	79046839	79047047	+	0.1	NA	intron (NR_015429, intron 3 of 7)	intron (NR_015429, intron 3 of 7)	20505	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA
13.9-6	chr4	124538548	124538845	+	0.1	NA	intron (NR_110838, intron 4 of 8)	intron (NR_110838, intron 4 of 8)	19738	NR_110838	101927087	Hs.518966	NR_110838	ENSG00000261083	LINC02516	-	long intergenic non-protein coding RNA 2516	ncRNA
22.6667	chr10	69869080	69869537	+	0.1	NA	intron (NM_001368898, intron 3 of 33)	intron (NM_001368898, intron 3 of 33)	67402	NM_001368895	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding
25.5667-9	chr20	55851144	55851450	+	0.1	NA	Intergenic	AluJb|SINE|Alu	154222	NM_080617	140689	Hs.126141	NM_080617	ENSG00000054803	CBLN4	CBLNL1	cerebellin 4 precursor	protein-coding
44.5-2	chr17_GL000205v2_random	27577	28302	+	0.1	NA	Intergenic	CER|Satellite|Satellite	30027	NR_003682	403340	Hs.572501	NR_003682		MGC70870	-	C-terminal binding protein 2 pseudogene	pseudo
31.1333-11	chr7	35022621	35023073	+	0.1	NA	intron (NM_015283, intron 1 of 21)	intron (NM_015283, intron 1 of 21)	14638	NM_001366673	23333	Hs.408623	NM_015283	ENSG00000173852	DPY19L1	-	dpy-19 like C-mannosyltransferase 1	protein-coding
6.23333-2	chr11	79841457	79841553	+	0.1	NA	Intergenic	Intergenic	-400475	NM_001098816	26011	Hs.213087	NM_001098816	ENSG00000149256	TENM4	Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4	teneurin transmembrane protein 4	protein-coding
26.0333-10	chr7	71870546	71871046	+	0.1	NA	intron (NM_001363460, intron 4 of 5)	intron (NM_001363460, intron 4 of 5)	466595	NM_001017440	83698	Hs.592750	NM_031468	ENSG00000183166	CALN1	CABP8	calneuron 1	protein-coding
28.7-3	chr2	84925304	84925830	+	0.1	NA	Intergenic	Intergenic	19911	NM_021103	9168	Hs.446574	NM_021103	ENSG00000034510	TMSB10	MIG12|TB10	thymosin beta 10	protein-coding
29.5	chr1	19659070	19659479	+	0.1	NA	TTS (NM_001278164)	TTS (NM_001278164)	-5601	NM_000871	3362	Hs.22180	NM_000871	ENSG00000158748	HTR6	5-HT6|5-HT6R	5-hydroxytryptamine receptor 6	protein-coding
38.2333-3	chr3	46821841	46822381	+	0.1	NA	Intergenic	THE1D|LTR|ERVL-MaLR	-9537	NR_160551	729756		NR_160551		PRSS44P	PRSS44|TESSP-4|TESSP4	serine protease 44, pseudogene	pseudo
41.3333-4	chr8	80031846	80032535	+	0.1	NA	Intergenic	Intergenic	-1931	NM_014018	28957	Hs.521124	NM_014018	ENSG00000147586	MRPS28	HSPC007|MRP-S28|MRP-S35|MRPS35	mitochondrial ribosomal protein S28	protein-coding
13.4333-11	chr8	96925622	96925786	+	0.1	NA	intron (NM_016134, intron 4 of 7)	AluSc8|SINE|Alu	280462	NM_016134	10404	Hs.156178	NM_016134	ENSG00000104324	CPQ	LDP|PGCP	carboxypeptidase Q	protein-coding
11.7	chr10	69859561	69859691	+	0.1	NA	intron (NM_001368898, intron 3 of 33)	intron (NM_001368898, intron 3 of 33)	57720	NM_001368895	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding
8.16667-3	chr20	18777816	18777897	+	0.1	NA	Intergenic	Intergenic	16126	NR_026884	29075	Hs.584899	NM_014162		LINC00652	HSPC072	long intergenic non-protein coding RNA 652	ncRNA
27.9667-3	chr13	21890993	21891512	+	0.1	NA	Intergenic	Intergenic	-13092	NR_047040	100874182	Hs.148951	NR_047040	ENSG00000226722	LINC00424	-	long intergenic non-protein coding RNA 424	ncRNA
36.0667-2	chr18	2737392	2737916	+	0.1	NA	intron (NM_015295, intron 25 of 47)	AluJr|SINE|Alu	81767	NM_015295	23347	Hs.8118	NM_015295	ENSG00000101596	SMCHD1	BAMS|FSHD2	structural maintenance of chromosomes flexible hinge domain containing 1	protein-coding
39.0333-4	chr3	77172210	77172806	+	0.1	NA	intron (NM_001290039, intron 2 of 26)	L1ME4a|LINE|L1	74496	NM_001128929	6092	Hs.13305	NM_002942	ENSG00000185008	ROBO2	SAX3	roundabout guidance receptor 2	protein-coding
29.4667-3	chr10	63242220	63242681	+	0.1	NA	intron (NM_001322252, intron 2 of 24)	AluSx|SINE|Alu	26773	NM_001282948	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding
33.7667-3	chr11	904373	905041	+	0.1	NA	exon (NM_001142677, exon 2 of 12)	exon (NM_001142677, exon 2 of 12)	6103	NM_001142676	66005	Hs.144468	NM_023947	ENSG00000177830	CHID1	GL008|SI-CLP|SICLP	chitinase domain containing 1	protein-coding
19-4	chr12	12078338	12078617	+	0.1	NA	intron (NM_001370269, intron 3 of 7)	intron (NM_001370269, intron 3 of 7)	7009	NM_138722	79370	Hs.210343	NM_030766	ENSG00000121380	BCL2L14	BCLG	BCL2 like 14	protein-coding
8.36667-8	chr8	85922753	85922836	+	0.1	NA	Intergenic	Intergenic	-94852	NR_003594	100288527	Hs.535056	NR_003594		REXO1L2P	-	REXO1 like 2, pseudogene	pseudo
28.2333-6	chr17	63620782	63621150	+	0.1	NA	Intergenic	AluSx|SINE|Alu	-1451	NM_203351	4215	Hs.29282	NM_002401	ENSG00000198909	MAP3K3	MAPKKK3|MEKK3	mitogen-activated protein kinase kinase kinase 3	protein-coding
20.8333-3	chr10	81895965	81896249	+	0.1	NA	intron (NR_163253, intron 2 of 10)	intron (NR_163253, intron 2 of 10)	18420	NR_163253	10718	Hs.125119	NM_001010848	ENSG00000185737	NRG3	HRG3|pro-NRG3	neuregulin 3	protein-coding
23.3333-17	chr8	87399679	87399940	+	0.1	NA	Intergenic	MamRep38|DNA|hAT	474206	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
27.0667-10	chr5	140136961	140137286	+	0.1	NA	Intergenic	Charlie4z|DNA|hAT-Charlie	11186	NM_001007189	492311	Hs.696360	NM_001007189	ENSG00000182700	IGIP	C5orf53	IgA inducing protein	protein-coding
14.6667-5	chr3	113823038	113823402	+	0.1	NA	Intergenic	AluY|SINE|Alu	-15568	NM_017577	54762	Hs.24583	NM_017577	ENSG00000178075	GRAMD1C	-	GRAM domain containing 1C	protein-coding
13.4333-8	chr7	5658810	5659018	+	0.1	NA	intron (NM_207111, intron 13 of 16)	intron (NM_207111, intron 13 of 16)	21547	NR_046834	100874342	Hs.665728	NR_046834	ENSG00000237738	RNF216-IT1	-	RNF216 intronic transcript 1	ncRNA
20.8-17	chr6	139586468	139586993	+	0.1	NA	Intergenic	Intergenic	-112134	NR_033919	645434	Hs.666240	NR_033919	ENSG00000238099	LINC01625	-	long intergenic non-protein coding RNA 1625	ncRNA
17.9333-4	chr16	73844214	73844460	+	0.1	NA	Intergenic	Intergenic	371184	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA
11.8333-8	chr4	147387066	147387286	+	0.1	NA	Intergenic	Intergenic	-42459	NR_031662	100313938		NR_031662	ENSG00000221369	MIR548G	MIRN548G|hsa-mir-548g	microRNA 548g	ncRNA
23.1-16	chr7	20140375	20140773	+	0.1	NA	promoter-TSS (NR_110114)	promoter-TSS (NR_110114)	-148	NR_110114	101927668	Hs.715900	NR_110114		LOC101927668	-	uncharacterized LOC101927668	ncRNA
29.2333-2	chr15	90750488	90750925	+	0.1	NA	intron (NM_001287246, intron 4 of 22)	Tigger7|DNA|TcMar-Tigger	33360	NM_001287248	641	Hs.725208	NM_000057	ENSG00000197299	BLM	BS|MGRISCE1|RECQ2|RECQL2|RECQL3	BLM RecQ like helicase	protein-coding
21.6667-7	chr8	129370339	129370615	+	0.1	NA	intron (NR_130918, intron 1 of 2)	intron (NR_130918, intron 1 of 2)	113665	NR_037457	100500839		NR_037457	ENSG00000263763	MIR3686	-	microRNA 3686	ncRNA
8.43333-2	chr3	111210483	111210567	+	0.1	NA	Intergenic	L2a|LINE|L2	138709	NM_015480	25945	Hs.293917	NM_015480	ENSG00000177707	NECTIN3	CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3	nectin cell adhesion molecule 3	protein-coding
26.6667-6	chr19	28422678	28423145	+	0.1	NA	Intergenic	AluJr|SINE|Alu	-183777	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA
22.7667-6	chr14	43130438	43130893	+	0.1	NA	Intergenic	L1MC3|LINE|L1	1376618	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
36.5-4	chr12	40096216	40097032	+	0.1	NA	intron (NM_052885, intron 1 of 9)	intron (NM_052885, intron 1 of 9)	9457	NM_052885	114134	Hs.558595	NM_052885	ENSG00000151229	SLC2A13	HMIT	solute carrier family 2 member 13	protein-coding
26.8-9	chr22_KI270878v1_alt	162216	162591	+	0.1	NA	Intergenic	LTR6A|LTR|ERV1	-29464	NR_110539	388882	Hs.542766	NR_110539	ENSG00000178248	FAM230I	LINC01658	family with sequence similarity 230 member I	ncRNA
32.0333-7	chr5	101415963	101416402	+	0.1	NA	Intergenic	Intergenic	-512900	NM_175052	7903	Hs.308628	NM_005668	ENSG00000113532	ST8SIA4	PST|PST1|SIAT8D|ST8SIA-IV	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	protein-coding
15.2-7	chr6	62346184	62346343	+	0.1	NA	Intergenic	L1PA12|LINE|L1	-60036	NR_146870	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
23.5333-12	chr3	132968909	132969281	+	0.1	NA	Intergenic	Intergenic	-69193	NM_023943	66000	Hs.191616	NM_023943	ENSG00000144868	TMEM108	CT124|RTLN	transmembrane protein 108	protein-coding
63.4667	chr6	50127768	50128776	+	0.1	NA	Intergenic	Intergenic	-78343	NM_001369057	245915	Hs.571092	NM_001037498	ENSG00000180872	DEFB112	DEFB-12	defensin beta 112	protein-coding
18.1667-4	chr11	92137662	92137943	+	0.1	NA	Intergenic	HERV16-int|LTR|ERVL	-87232	NM_001367949	120114	Hs.98523	NM_001008781	ENSG00000165323	FAT3	CDHF15|CDHR10|hFat3	FAT atypical cadherin 3	protein-coding
34.0667-8	chr6	104078703	104079423	+	0.1	NA	Intergenic	L1MA9|LINE|L1	780483	NM_001321084	57531	Hs.434340	NM_020771	ENSG00000085382	HACE1	SPPRS	HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1	protein-coding
32.1-8	chr4	8566237	8566762	+	0.1	NA	Intergenic	AluSz6|SINE|Alu	-13738	NR_045511	27201	Hs.740355	NM_080819	ENSG00000155269	GPR78	-	G protein-coupled receptor 78	protein-coding
10.6667-3	chr8	69113140	69113279	+	0.1	NA	Intergenic	Intergenic	-9019	NR_039986	100505718	Hs.122386	NR_039986	ENSG00000253658	LINC01592	-	long intergenic non-protein coding RNA 1592	ncRNA
24.9-2	chr11	28865728	28866081	+	0.1	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-388356	NR_107035	102466876		NR_107035	ENSG00000273912	MIR8068	hsa-mir-8068	microRNA 8068	ncRNA
31.1-10	chr3	143456586	143457003	+	0.1	NA	intron (NM_173653, intron 12 of 15)	AluSg4|SINE|Alu	114548	NR_048544	100885796	Hs.581618	NR_048544	ENSG00000240012	SLC9A9-AS1	-	SLC9A9 antisense RNA 1	ncRNA
13-3	chr14	87163520	87163685	+	0.1	NA	Intergenic	MIR|SINE|MIR	257824	NR_038445	283585	Hs.381998	NR_038445	ENSG00000258804	LINC01148	-	long intergenic non-protein coding RNA 1148	ncRNA
11.9333-5	chr8	128487818	128487985	+	0.1	NA	intron (NR_121672, intron 2 of 7)	MLT1I|LTR|ERVL-MaLR	76778	NR_121673	101927774	Hs.628730	NR_121672		LINC00824	LINC01263	long intergenic non-protein coding RNA 824	ncRNA
31.2667	chr10	23556940	23557418	+	0.1	NA	Intergenic	Intergenic	117910	NM_001145373	220213	Hs.499042	NM_001145373	ENSG00000165312	OTUD1	DUBA7|OTDC1	OTU deubiquitinase 1	protein-coding
14.0667-6	chr19	44212940	44213122	+	0.1	NA	intron (NM_182490, intron 1 of 5)	intron (NM_182490, intron 1 of 5)	499	NM_182490	7770	Hs.298089	NM_182490	ENSG00000131115	ZNF227	-	zinc finger protein 227	protein-coding
26.8667-10	chr8	29165770	29166176	+	0.1	NA	intron (NM_015254, intron 11 of 39)	intron (NM_015254, intron 11 of 39)	97097	NM_015254	23303	Hs.444767	NM_015254	ENSG00000197892	KIF13B	GAKIN	kinesin family member 13B	protein-coding
25.3667-4	chr7	12988471	12988919	+	0.1	NA	Intergenic	L1M4b|LINE|L1	301062	NM_005738	10124	Hs.245540	NM_005738	ENSG00000122644	ARL4A	ARL4	ADP ribosylation factor like GTPase 4A	protein-coding
19.7-12	chr5	145210485	145210703	+	0.1	NA	Intergenic	L1PB1|LINE|L1	624748	NM_182960	153768	Hs.314261	NM_138492	ENSG00000186314	PRELID2	-	PRELI domain containing 2	protein-coding
14.2333-5	chr11	10758800	10758992	+	0.1	NA	intron (NM_014633, intron 5 of 24)	LTR24|LTR|ERV1	7650	NM_014633	9646	Hs.725151	NM_014633	ENSG00000198730	CTR9	SH2BP1|TSBP|p150|p150TSP	CTR9 homolog, Paf1/RNA polymerase II complex component	protein-coding
11.4333	chr12	115435744	115435887	+	0.1	NA	Intergenic	Intergenic	712839	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA
22.2333-11	chr2	221860105	221860387	+	0.1	NA	Intergenic	L1MB5|LINE|L1	-286044	NM_001304536	2043	Hs.371218	NM_004438	ENSG00000116106	EPHA4	EK8|HEK8|SEK|TYRO1	EPH receptor A4	protein-coding
35.4	chr1	195240277	195240751	+	0.1	NA	Intergenic	L1MEh|LINE|L1	848201	NR_146895	105371673		NR_146895		LINC01724	-	long intergenic non-protein coding RNA 1724	ncRNA
44.1-5	chr9	72587181	72587794	+	0.1	NA	intron (NM_138691, intron 2 of 23)	MLT1I|LTR|ERVL-MaLR	65686	NM_138691	117531	Hs.670211	NM_138691	ENSG00000165091	TMC1	DFNA36|DFNB11|DFNB7	transmembrane channel like 1	protein-coding
20.3-5	chr17	34054680	34055024	+	0.1	NA	intron (NM_001094, intron 1 of 9)	intron (NM_001094, intron 1 of 9)	101954	NM_001094	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding
13.6667-4	chr14	75782300	75782511	+	0.1	NA	intron (NM_015072, intron 24 of 31)	intron (NM_015072, intron 24 of 31)	121159	NM_015072	23093	Hs.709609	NM_015072	ENSG00000119685	TTLL5	CORD19|KIAA0998|STAMP	tubulin tyrosine ligase like 5	protein-coding
13.0667-11	chr7	133938607	133938790	+	0.1	NA	intron (NM_021807, intron 14 of 17)	intron (NM_021807, intron 14 of 17)	-113810	NR_120513	101928861	Hs.675747	NR_120513		LOC101928861	-	uncharacterized LOC101928861	ncRNA
25.5333-3	chr17	6972928	6973293	+	0.1	NA	Intergenic	AluSg|SINE|Alu	-22939	NM_000697	239	Hs.654431	NM_000697	ENSG00000108839	ALOX12	12-LOX|12S-LOX|LOG12	arachidonate 12-lipoxygenase, 12S type	protein-coding
18.7-2	chr15	95636400	95636777	+	0.1	NA	Intergenic	Intergenic	203495	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA
26.1667-9	chr7	31547350	31547766	+	0.1	NA	intron (NM_001257968, intron 1 of 14)	THE1C|LTR|ERVL-MaLR	-5444	NM_194300	223075	Hs.224269	NM_194300	ENSG00000180347	ITPRID1	CCDC129	ITPR interacting domain containing 1	protein-coding
30.4667-5	chr11	76938980	76939348	+	0.1	NA	intron (NM_001300955, intron 2 of 9)	L1MC5a|LINE|L1	78246	NM_001300955	55331	Hs.23862	NM_018367	ENSG00000078124	ACER3	APHC|PHCA|PLDECO	alkaline ceramidase 3	protein-coding
11.0667	chr1	97562995	97563216	+	0.1	NA	intron (NM_000110, intron 11 of 22)	intron (NM_000110, intron 11 of 22)	-233816	NR_046591	100873933	Hs.568669	NR_046591	ENSG00000235777	DPYD-AS2	-	DPYD antisense RNA 2	ncRNA
23.4333-3	chr10	86685212	86685558	+	0.1	NA	intron (NM_007078, intron 5 of 13)	intron (NM_007078, intron 5 of 13)	16821	NM_001080116	11155	Hs.657271	NM_007078	ENSG00000122367	LDB3	CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP	LIM domain binding 3	protein-coding
32.9-6	chr16	52810338	52810796	+	0.1	NA	Intergenic	MER5A|DNA|hAT-Charlie	-203592	NR_033920	643714	Hs.662199	NR_033920	ENSG00000249231	CASC16	LINC00918	cancer susceptibility 16	ncRNA
35.4667-5	chr14	84310157	84310624	+	0.1	NA	Intergenic	Intergenic	-961542	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
27.4-8	chr2	25878847	25879266	+	0.1	NA	promoter-TSS (NM_018263)	promoter-TSS (NM_018263)	-569	NM_018263	55252	Hs.119815	NM_018263	ENSG00000143970	ASXL2	ASXH2|SHAPNS	ASXL transcriptional regulator 2	protein-coding
20.5333	chr1	56643046	56643406	+	0.1	NA	intron (NR_135111, intron 2 of 2)	intron (NR_135111, intron 2 of 2)	-2088	NM_006252	5563	Hs.437039	NM_006252	ENSG00000162409	PRKAA2	AMPK|AMPK2|AMPKa2|PRKAA	protein kinase AMP-activated catalytic subunit alpha 2	protein-coding
36.1333-6	chr3	60024942	60025494	+	0.1	NA	intron (NM_001320901, intron 2 of 6)	Charlie4z|DNA|hAT-Charlie	55691	NR_135491	2272	Hs.655995	NM_002012	ENSG00000189283	FHIT	AP3Aase|FRA3B	fragile histidine triad diadenosine triphosphatase	protein-coding
21.2-16	chr20	22681469	22681715	+	0.1	NA	intron (NR_146527, intron 2 of 2)	intron (NR_146527, intron 2 of 2)	3752	NR_146528	105372566	Hs.555065	NR_146527		LINC01747	-	long intergenic non-protein coding RNA 1747	ncRNA
34.1667-4	chr9	36828080	36828525	+	0.1	NA	Intergenic	MLT1E1A|LTR|ERVL-MaLR	-4703	NR_039686	100616289		NR_039686	ENSG00000266255	MIR4475	-	microRNA 4475	ncRNA
25.7667-8	chr7	3649727	3650220	+	0.1	NA	intron (NM_152744, intron 4 of 44)	intron (NM_152744, intron 4 of 44)	348721	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
22.2333-3	chr11	114943680	114944046	+	0.1	NA	Intergenic	L1MD2|LINE|L1	265336	NM_182495	120406	Hs.446760	NM_182495	ENSG00000204361	NXPE2	FAM55B	neurexophilin and PC-esterase domain family member 2	protein-coding
15.7667-9	chr3	105734202	105734466	+	0.1	NA	intron (NR_135809, intron 8 of 18)	intron (NR_135809, intron 8 of 18)	133257	NM_001321813	868	Hs.430589	NM_170662	ENSG00000114423	CBLB	Cbl-b|Nbla00127|RNF56	Cbl proto-oncogene B	protein-coding
25.3333-4	chr18	7667112	7667464	+	0.1	NA	intron (NM_002845, intron 1 of 30)	intron (NM_002845, intron 1 of 30)	99972	NM_001105244	5797	Hs.49774	NM_002845	ENSG00000173482	PTPRM	PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu	protein tyrosine phosphatase receptor type M	protein-coding
26.6333-12	chrX	58407304	58407762	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	-496900	NM_007156	7789	Hs.550094	NM_007156	ENSG00000198205	ZXDA	ZNF896	zinc finger X-linked duplicated A	protein-coding
15.7333-16	chr7	95640837	95641130	+	0.1	NA	Intergenic	Intergenic	-44467	NM_002612	5166	Hs.8364	NM_002612	ENSG00000004799	PDK4	-	pyruvate dehydrogenase kinase 4	protein-coding
26.0333-7	chr22	19891876	19892400	+	0.1	NA	intron (NR_147957, intron 10 of 16)	intron (NR_147957, intron 10 of 16)	-37264	NM_053004	54584	Hs.105642	NM_053004	ENSG00000185838	GNB1L	DGCRK3|FKSG1|GY2|WDR14|WDVCF	G protein subunit beta 1 like	protein-coding
33.1667-5	chr4	95312329	95312737	+	0.1	NA	intron (NM_003728, intron 2 of 15)	MIR|SINE|MIR	221042	NM_001256794	658	Hs.598475	NM_001203	ENSG00000138696	BMPR1B	ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293	bone morphogenetic protein receptor type 1B	protein-coding
34.2-4	chr14	99188704	99189196	+	0.1	NA	intron (NM_022898, intron 2 of 2)	intron (NM_022898, intron 2 of 2)	83247	NM_001282238	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha	BAF chromatin remodeling complex subunit BCL11B	protein-coding
12.1	chr1	57238431	57238659	+	0.1	NA	intron (NM_001353980, intron 5 of 5)	intron (NM_001353980, intron 5 of 5)	184567	NM_001365793	1600	Hs.477370	NM_021080	ENSG00000173406	DAB1	SCA37	DAB adaptor protein 1	protein-coding
30.1-2	chr14	50206773	50207156	+	0.1	NA	intron (NM_006939, intron 1 of 22)	AluJb|SINE|Alu	24614	NM_006939	6655	Hs.291533	NM_006939	ENSG00000100485	SOS2	NS9|SOS-2	SOS Ras/Rho guanine nucleotide exchange factor 2	protein-coding
27.6333-11	chrX	51102508	51102831	+	0.1	NA	intron (NR_110382, intron 3 of 8)	intron (NR_110382, intron 3 of 8)	68752	NR_110382	101926971	Hs.657995	NR_110382	ENSG00000230317	LINC01284	-	long intergenic non-protein coding RNA 1284	ncRNA
34.1-3	chr3	166059578	166060173	+	0.1	NA	Intergenic	Intergenic	-222452	NM_000055	590	Hs.420483	NM_000055	ENSG00000114200	BCHE	BCHED|CHE1|CHE2|E1	butyrylcholinesterase	protein-coding
11.4667	chr1	85255226	85255363	+	0.1	NA	intron (NR_024113, intron 3 of 3)	AluSg|SINE|Alu	4368	NR_024113	148423	Hs.26226	NM_198077	ENSG00000162642	C1orf52	gm117	chromosome 1 open reading frame 52	protein-coding
14.8667-2	chr1	226206333	226206707	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-17144	NM_001282402	83881	Hs.282079	NM_031944	ENSG00000185155	MIXL1	MILD1|MIX|MIXL	Mix paired-like homeobox	protein-coding
16.4-5	chr15	55664934	55665138	+	0.1	NA	intron (NM_173814, intron 11 of 19)	AluY|SINE|Alu	-76065	NM_015617	26108	Hs.87194	NM_015617	ENSG00000171016	PYGO1	-	pygopus family PHD finger 1	protein-coding
17.7333-9	chr3	88909397	88909690	+	0.1	NA	Intergenic	L1MC3|LINE|L1	-198078	NM_005233	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
16.4-4	chr11	105646457	105646690	+	0.1	NA	intron (NR_046356, intron 2 of 16)	L1PA13|LINE|L1	35867	NR_046356	2893	Hs.503743	NM_000829	ENSG00000152578	GRIA4	GLUR4|GLUR4C|GLURD|GluA4|NEDSGA	glutamate ionotropic receptor AMPA type subunit 4	protein-coding
32.4-8	chr3	15537417	15537947	+	0.1	NA	Intergenic	AluSz6|SINE|Alu	-15976	NM_080539	8292	Hs.146735	NM_005677	ENSG00000206561	COLQ	CMS5|EAD	collagen like tail subunit of asymmetric acetylcholinesterase	protein-coding
25.3-6	chr15	89017602	89018037	+	0.1	NA	Intergenic	MER5B|DNA|hAT-Charlie	-70637	NM_007011	11057	Hs.122337	NM_007011	ENSG00000140526	ABHD2	HS1-2|LABH2|PHPS1-2	abhydrolase domain containing 2	protein-coding
37.3-5	chr5	125153415	125154044	+	0.1	NA	intron (NR_109882, intron 2 of 5)	intron (NR_109882, intron 2 of 5)	116898	NR_109882	101927421	Hs.121305	NR_109882		LOC101927421	-	uncharacterized LOC101927421	ncRNA
14.3-4	chr11	115938788	115938954	+	0.1	NA	Intergenic	Intergenic	-178671	NR_034148	283143	Hs.130499	NR_034148		LINC00900	-	long intergenic non-protein coding RNA 900	ncRNA
33.5	chr10	60643990	60644676	+	0.1	NA	intron (NM_001204403, intron 1 of 43)	intron (NM_001204403, intron 1 of 43)	-71377	NM_001204404	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding
17.7-3	chr13	22753786	22754016	+	0.1	NA	Intergenic	MSTB|LTR|ERVL-MaLR	144280	NR_033774	646201	Hs.729338	NR_033774		BASP1P1	-	BASP1 pseudogene 1	pseudo
19.6-18	chr7	125412850	125413046	+	0.1	NA	Intergenic	Intergenic	-148657	NR_110182	101928254	Hs.571236	NR_110182	ENSG00000219445	LOC101928254	-	uncharacterized LOC101928254	ncRNA
15.9333	chr1	44457406	44457695	+	0.1	NA	intron (NM_001319957, intron 1 of 13)	intron (NM_001319957, intron 1 of 13)	33549	NM_001319957	55182	Hs.456557	NM_018150	ENSG00000187147	RNF220	C1orf164	ring finger protein 220	protein-coding
20.6-6	chr3	7714776	7715239	+	0.1	NA	intron (NM_181874, intron 10 of 10)	intron (NM_181874, intron 10 of 10)	-179723	NR_046606	100873937	Hs.570608	NR_046606	ENSG00000236202	GRM7-AS1	-	GRM7 antisense RNA 1	ncRNA
41.8667-3	chr3	47092224	47092713	+	0.1	NA	intron (NR_146158, intron 9 of 21)	intron (NR_146158, intron 9 of 21)	71509	NM_014159	29072	Hs.517941	NM_012271	ENSG00000181555	SETD2	HBP231|HIF-1|HIP-1|HSPC069|HYPB|KMT3A|LLS|SET2|p231HBP	SET domain containing 2, histone lysine methyltransferase	protein-coding
30.7667-14	chr9	97440018	97440659	+	0.1	NA	intron (NM_001302884, intron 4 of 15)	intron (NM_001302884, intron 4 of 15)	28242	NM_001302884	23424	Hs.193842	NM_014290	ENSG00000196116	TDRD7	CATC4|PCTAIRE2BP|TRAP	tudor domain containing 7	protein-coding
17.3667-10	chr5	30640133	30640471	+	0.1	NA	Intergenic	Intergenic	-553384	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
12.4333-15	chrX	24964136	24964416	+	0.1	NA	intron (NM_016937, intron 36 of 36)	intron (NM_016937, intron 36 of 36)	51689	NM_139058	170302	Hs.300304	NM_139058	ENSG00000004848	ARX	CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS	aristaless related homeobox	protein-coding
59.6	chr8	90753063	90753914	+	0.1	NA	Intergenic	Intergenic	-38287	NM_022351	64168	Hs.719466	NM_022351	ENSG00000123119	NECAB1	EFCBP1|STIP-1	N-terminal EF-hand calcium binding protein 1	protein-coding
40.4333-3	chr17	61558658	61559422	+	0.1	NA	Intergenic	MIR3|SINE|MIR	32179	NM_199290	342538	Hs.591178	NM_199290	ENSG00000253506	NACA2	ANAC|NACAL	nascent polypeptide associated complex subunit alpha 2	protein-coding
15.3333-5	chr18	2432559	2432829	+	0.1	NA	Intergenic	Intergenic	138811	NM_022840	64863	Hs.126888	NM_022840	ENSG00000101574	METTL4	HsT661	methyltransferase like 4	protein-coding
36.4333-3	chr7	1198808	1199479	+	0.1	NA	Intergenic	AluSg|SINE|Alu	-33729	NM_001080461	340260		NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding
24.3-6	chr2	169628481	169628913	+	0.1	NA	intron (NM_004792, intron 9 of 13)	AluJb|SINE|Alu	44346	NM_004792	9360	Hs.470544	NM_004792	ENSG00000138398	PPIG	CARS-Cyp|CYP|SCAF10|SRCyp	peptidylprolyl isomerase G	protein-coding
22.6667-4	chr21	27754014	27754471	+	0.1	NA	Intergenic	Intergenic	31863	NR_024357	54088	Hs.570434	NR_024357	ENSG00000225298	LINC00113	C21orf23|NCRNA00113	long intergenic non-protein coding RNA 113	ncRNA
24.4-9	chr18	51856421	51856734	+	0.1	NA	Intergenic	Intergenic	464535	NR_040074	100287225	Hs.448920	NR_040074	ENSG00000227115	LINC01630	-	long intergenic non-protein coding RNA 1630	ncRNA
22.4-10	chr18	36023161	36023526	+	0.1	NA	intron (NM_001303411, intron 7 of 7)	Tigger1|DNA|TcMar-Tigger	44216	NM_001303411	55197	Hs.464912	NM_018170	ENSG00000141425	RPRD1A	HsT3101|P15RS	regulation of nuclear pre-mRNA domain containing 1A	protein-coding
4.3-4	chr9	88343873	88343917	+	0.1	NA	Intergenic	Intergenic	-44549	NM_006717	10927	Hs.146804	NM_006717	ENSG00000106723	SPIN1	SPIN|TDRD24	spindlin 1	protein-coding
27.4-15	chr6	138627418	138627911	+	0.1	NA	Intergenic	AluSg|SINE|Alu	-55095	NM_020464	57224	Hs.652741	NM_020464	ENSG00000135540	NHSL1	C6orf63	NHS like 1	protein-coding
12-3	chr4	55566993	55567150	+	0.1	NA	intron (NM_152401, intron 4 of 5)	intron (NM_152401, intron 4 of 5)	-20162	NM_004898	9575	Hs.436975	NM_004898	ENSG00000134852	CLOCK	KAT13D|bHLHe8	clock circadian regulator	protein-coding
25.3-17	chr8	49920026	49920356	+	0.1	NA	intron (NR_135798, intron 1 of 15)	intron (NR_135798, intron 1 of 15)	8784	NR_135794	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
11.8333-9	chr8	51750479	51750635	+	0.1	NA	intron (NM_144651, intron 1 of 22)	Tigger3|DNA|TcMar-Tigger	58888	NM_144651	137902	Hs.444882	NM_144651	ENSG00000147485	PXDNL	PMR1|PRM1|VPO2	peroxidasin like	protein-coding
15.5333-2	chr11	6133757	6133994	+	0.1	NA	Intergenic	MER70-int|LTR|ERVL	26191	NM_001005181	196335	Hs.632154	NM_001005181	ENSG00000180919	OR56B4	OR11-67	olfactory receptor family 56 subfamily B member 4	protein-coding
14-7	chr17	79739170	79739394	+	0.1	NA	intron (NM_178543, intron 5 of 5)	L2a|LINE|L2	8339	NM_178543	339221	Hs.114084	NM_178543	ENSG00000182156	ENPP7	ALK-SMase|E-NPP 7|NPP-7|NPP7	ectonucleotide pyrophosphatase/phosphodiesterase 7	protein-coding
13.4333-4	chr2	49013339	49013565	+	0.1	NA	intron (NM_000145, intron 4 of 9)	(ATAT)n|Simple_repeat|Simple_repeat	-46151	NR_107011	102465854		NR_107011	ENSG00000212036	MIR548BA	hsa-mir-548ba	microRNA 548ba	ncRNA
11.5667-6	chr6	238646	238808	+	0.1	NA	Intergenic	L1MA4A|LINE|L1	-33243	NR_126020	285766	Hs.657946	NR_126020	ENSG00000263667	LOC285766	-	uncharacterized LOC285766	ncRNA
19.9-15	chr6	52207615	52207962	+	0.1	NA	Intergenic	Intergenic	21413	NM_002190	3605	Hs.41724	NM_002190	ENSG00000112115	IL17A	CTLA-8|CTLA8|IL-17|IL-17A|IL17	interleukin 17A	protein-coding
20.9-5	chr12	120758318	120758756	+	0.1	NA	Intergenic	AluSx|SINE|Alu	32711	NM_000017	35	Hs.507076	NM_000017	ENSG00000122971	ACADS	ACAD3|SCAD	acyl-CoA dehydrogenase short chain	protein-coding
31.2667-10	chr6	129489053	129489450	+	0.1	NA	intron (NM_000426, intron 56 of 64)	intron (NM_000426, intron 56 of 64)	220926	NM_033515	93663	Hs.486458	NM_033515	ENSG00000146376	ARHGAP18	MacGAP|SENEX|bA307O14.2	Rho GTPase activating protein 18	protein-coding
31.1-7	chr16	11424098	11424412	+	0.1	NA	exon (NM_001370704, exon 40 of 67)	exon (NM_001370704, exon 40 of 67)	-41005	NR_110907	101927131	Hs.569654	NR_110907	ENSG00000262999	LOC101927131	-	uncharacterized LOC101927131	ncRNA
16.5667-3	chr2	98234640	98234956	+	0.1	NA	intron (NR_144297, intron 17 of 18)	intron (NR_144297, intron 17 of 18)	85265	NM_001345864	200403	Hs.269977	NM_144992	ENSG00000168658	VWA3B	SCAR22	von Willebrand factor A domain containing 3B	protein-coding
9.1	chr14	59260973	59261159	+	0.1	NA	intron (NM_001270520, intron 1 of 24)	intron (NM_001270520, intron 1 of 24)	-2375	NM_014992	23002	Hs.19156	NM_014992	ENSG00000100592	DAAM1	-	dishevelled associated activator of morphogenesis 1	protein-coding
17.3-5	chr3	130339608	130339841	+	0.1	NA	Intergenic	L1PA11|LINE|L1	-5792	NM_153264	256076	Hs.205403	NM_153264	ENSG00000172752	COL6A5	COL29A1|VWA4	collagen type VI alpha 5 chain	protein-coding
22.6-12	chr22	41166352	41166866	+	0.1	NA	exon (NM_001362843, exon 22 of 30)	exon (NM_001362843, exon 22 of 30)	30892	NR_110514	101927279	Hs.517517	NR_110514		EP300-AS1	-	EP300 antisense RNA 1	ncRNA
21.4667-3	chr14	63947352	63947715	+	0.1	NA	intron (NM_015180, intron 6 of 114)	L1ME4a|LINE|L1	94529	NM_015180	23224	Hs.745014	NM_015180	ENSG00000054654	SYNE2	EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH	spectrin repeat containing nuclear envelope protein 2	protein-coding
26.4333-17	chr7	4673488	4673958	+	0.1	NA	Intergenic	AluYe5|SINE|Alu	-8572	NM_001037165	221937	Hs.487393	NM_001037165	ENSG00000164916	FOXK1	FOXK1L	forkhead box K1	protein-coding
19.4-2	chr1	91393296	91393604	+	0.1	NA	intron (NM_001017975, intron 4 of 38)	L2|LINE|L2	11387	NM_001017975	164045	Hs.454818	NM_001017975	ENSG00000162669	HFM1	MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase	helicase for meiosis 1	protein-coding
33.7333-8	chr5	34973079	34973572	+	0.1	NA	Intergenic	Intergenic	43732	NM_194283	134218	Hs.131887	NM_194283	ENSG00000168724	DNAJC21	BMFS3|DNAJA5|GS3|JJJ1	DnaJ heat shock protein family (Hsp40) member C21	protein-coding
28.0333-10	chr8	139906779	139907167	+	0.1	NA	intron (NM_001160372, intron 20 of 22)	intron (NM_001160372, intron 20 of 22)	193562	NR_144431	359809	Hs.26814	NR_144431	ENSG00000282164	PEG13	-	paternally expressed 13	ncRNA
28.6667-12	chr7	3314516	3315035	+	0.1	NA	intron (NM_152744, intron 1 of 44)	intron (NM_152744, intron 1 of 44)	13523	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
9.5	chr11	110646290	110646385	+	0.1	NA	intron (NM_020809, intron 3 of 15)	intron (NM_020809, intron 3 of 15)	65488	NM_001258415	57569	Hs.6136	NM_020809	ENSG00000137727	ARHGAP20	RARHOGAP	Rho GTPase activating protein 20	protein-coding
24.9-10	chr4	42186243	42186568	+	0.1	NA	Intergenic	AluYm1|SINE|Alu	-33750	NM_001159547	389206	Hs.120591	NM_207406	ENSG00000188848	BEND4	CCDC4	BEN domain containing 4	protein-coding
15.4333-8	chr20	30606406	30606788	+	0.1	NA	Intergenic	Intergenic	-203135	NR_045115	140678	Hs.653099	NR_045115		MLLT10P1	MLLT10L|bA348I14.3	MLLT10 pseudogene 1	pseudo
41.3-6	chr4	121980320	121981007	+	0.1	NA	Intergenic	MLT1H|LTR|ERVL-MaLR	-28603	NM_001366479	7222	Hs.150981	NM_003305	ENSG00000138741	TRPC3	SCA41|TRP3	transient receptor potential cation channel subfamily C member 3	protein-coding
30.5333-6	chr4	52946871	52947360	+	0.1	NA	intron (NM_152540, intron 5 of 8)	intron (NM_152540, intron 5 of 8)	84798	NM_023940	65997	Hs.8035	NM_023940	ENSG00000128045	RASL11B	-	RAS like family 11 member B	protein-coding
26.1-6	chr12	84356315	84356841	+	0.1	NA	Intergenic	HERVL18-int|LTR|ERVL	556221	NM_182767	55117	Hs.44424	NM_018057	ENSG00000072041	SLC6A15	NTT73|SBAT1|V7-3|hv7-3	solute carrier family 6 member 15	protein-coding
16.5-10	chr5	91773021	91773399	+	0.1	NA	Intergenic	L1MEd|LINE|L1	-389893	NM_020801	57561	Hs.24684	NM_020801	ENSG00000113369	ARRDC3	TLIMP	arrestin domain containing 3	protein-coding
16.0333-7	chr2	120960967	120961196	+	0.1	NA	intron (NM_005270, intron 5 of 13)	intron (NM_005270, intron 5 of 13)	168800	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding
27.2333-9	chr9	77024189	77024698	+	0.1	NA	Intergenic	Intergenic	4788	NM_001013735	442425	Hs.553843	NM_001013735	ENSG00000204612	FOXB2	bA159H20.4	forkhead box B2	protein-coding
30.6-12	chr7	103861301	103861646	+	0.1	NA	intron (NM_005045, intron 2 of 64)	intron (NM_005045, intron 2 of 64)	128043	NM_173054	5649	Hs.655654	NM_005045	ENSG00000189056	RELN	ETL7|LIS2|PRO1598|RL	reelin	protein-coding
19.2-4	chr14	55581802	55582108	+	0.1	NA	intron (NM_004986, intron 1 of 41)	intron (NM_004986, intron 1 of 41)	1748	NM_001271014	3895	Hs.509414	NM_004986	ENSG00000126777	KTN1	CG1|KNT|MU-RMS-40.19	kinectin 1	protein-coding
20.9333-18	chr8	121801288	121801710	+	0.1	NA	Intergenic	Intergenic	-160059	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
16.8333-8	chr3	46739399	46739797	+	0.1	NA	Intergenic	L1PREC2|LINE|L1	-3171	NR_147121	100287362	Hs.673244	NM_001205271	ENSG00000261603	PRSS46P	PRSS46|TESSP6	serine protease 46, pseudogene	pseudo
24.5667-14	chr7	3563506	3563920	+	0.1	NA	intron (NM_152744, intron 1 of 44)	L1M5|LINE|L1	262461	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
21.6-12	chr4	5679813	5680237	+	0.1	NA	intron (NM_147127, intron 7 of 21)	Tigger3b|DNA|TcMar-Tigger	28534	NM_147127	132884	Hs.87306	NM_147127	ENSG00000173040	EVC2	LBN|WAD	EvC ciliary complex subunit 2	protein-coding
6.46667-4	chr6	140818789	140818904	+	0.1	NA	Intergenic	Intergenic	135032	NR_039675	100616180		NR_039675	ENSG00000264390	MIR4465	-	microRNA 4465	ncRNA
30.4-3	chr14	45313802	45314334	+	0.1	NA	Intergenic	Intergenic	-60866	NM_018353	55320	Hs.732769	NM_018353	ENSG00000129534	MIS18BP1	C14orf106|HSA242977|KNL2|M18BP1	MIS18 binding protein 1	protein-coding
25-7	chr22	27423579	27424062	+	0.1	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	113169	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LINC02554	-	long intergenic non-protein coding RNA 2554	ncRNA
26.2667-8	chr9	93658664	93658975	+	0.1	NA	intron (NM_005392, intron 10 of 21)	intron (NM_005392, intron 10 of 21)	63978	NR_049853	100847045		NR_049853	ENSG00000283146	MIR548AU	-	microRNA 548au	ncRNA
26.6333-11	chr9	33471029	33471417	+	0.1	NA	intron (NM_139235, intron 3 of 15)	AluSq2|SINE|Alu	2701	NM_022917	65083	Hs.493709	NM_022917	ENSG00000165271	NOL6	NRAP|UTP22|bA311H10.1	nucleolar protein 6	protein-coding
35.1-2	chr1	181474871	181475286	+	0.1	NA	Intergenic	Intergenic	-8439	NM_001205293	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding
45.1667	chr10	96381424	96381930	+	0.1	NA	intron (NM_012465, intron 16 of 20)	intron (NM_012465, intron 16 of 20)	-22312	NM_001284322	93377	Hs.12449	NM_033207	ENSG00000197430	OPALIN	HTMP10|TMEM10|TMP10	oligodendrocytic myelin paranodal and inner loop protein	protein-coding
12.8667-3	chr19	49187402	49187530	+	0.1	NA	intron (NM_001321281, intron 10 of 22)	AluJb|SINE|Alu	29674	NM_001321285	54795	Hs.467101	NM_017636	ENSG00000130529	TRPM4	LTrpC4|PFHB1B|TRPM4B|hTRPM4	transient receptor potential cation channel subfamily M member 4	protein-coding
8.86666-6	chr9	122860501	122860687	+	0.1	NA	intron (NM_001100588, intron 10 of 20)	AluJr|SINE|Alu	19725	NR_003071	692206	Hs.693253	NR_003071	ENSG00000212447	SNORD90	HBII-295	small nucleolar RNA, C/D box 90	snoRNA
21.5667	chr1	187650390	187650796	+	0.1	NA	Intergenic	Intergenic	206965	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
15.3333-9	chr5	8316974	8317253	+	0.1	NA	Intergenic	L2|LINE|L2	140451	NR_039984	729506	Hs.566412	NR_039984	ENSG00000245729	LINC02226	-	long intergenic non-protein coding RNA 2226	ncRNA
24.5333-13	chr6	90503492	90504019	+	0.1	NA	Intergenic	Intergenic	83317	NM_145331	6885	Hs.594838	NM_003188	ENSG00000135341	MAP3K7	CSCF|FMD2|MEKK7|TAK1|TGF1a	mitogen-activated protein kinase kinase kinase 7	protein-coding
30.1667-5	chr7	45968141	45968703	+	0.1	NA	Intergenic	Intergenic	-47150	NM_001013398	3486	Hs.450230	NM_000598	ENSG00000146674	IGFBP3	BP-53|IBP3	insulin like growth factor binding protein 3	protein-coding
25.9-8	chr4	52239006	52239400	+	0.1	NA	Intergenic	MIR|SINE|MIR	187899	NM_145263	132671	Hs.527090	NM_145263	ENSG00000163071	SPATA18	Mieap|SPETEX1	spermatogenesis associated 18	protein-coding
39.6-2	chr10	104334197	104334696	+	0.1	NA	promoter-TSS (NM_033397)	promoter-TSS (NM_033397)	-541	NM_033397	85450	Hs.523252	NM_033397	ENSG00000148841	ITPRIP	DANGER|KIAA1754|bA127L20|bA127L20.2	inositol 1,4,5-trisphosphate receptor interacting protein	protein-coding
50.4667	chr11	40145438	40146305	+	0.1	NA	intron (NM_020929, intron 3 of 4)	intron (NM_020929, intron 3 of 4)	147259	NR_047674	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
37.4333-7	chr16	84796417	84796791	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-23381	NM_031476	83716	Hs.513779	NM_031476	ENSG00000103196	CRISPLD2	CRISP11|LCRISP2|LGL1	cysteine rich secretory protein LCCL domain containing 2	protein-coding
17.6-5	chr17	48380558	48380845	+	0.1	NA	intron (NM_001075099, intron 2 of 12)	intron (NM_001075099, intron 2 of 12)	49513	NM_003726	8631	Hs.316931	NM_003726	ENSG00000141293	SKAP1	HEL-S-81p|SCAP1|SKAP55	src kinase associated phosphoprotein 1	protein-coding
16.7-9	chr19	37442833	37443165	+	0.1	NA	intron (NM_152484, intron 3 of 5)	L1ME3A|LINE|L1	24445	NM_001330482	148266	Hs.511848	NM_152484	ENSG00000196437	ZNF569	ZAP1|ZNF	zinc finger protein 569	protein-coding
19.5667-11	chr8	131289133	131289372	+	0.1	NA	Intergenic	Intergenic	-248343	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
13.2333-3	chr16	56369553	56369787	+	0.1	NA	intron (NM_001144, intron 10 of 13)	L1PB4|LINE|L1	55319	NM_001323511	267	Hs.295137	NM_001144	ENSG00000159461	AMFR	GP78|RNF45	autocrine motility factor receptor	protein-coding
25.1-9	chr2	179108481	179108975	+	0.1	NA	3' UTR (NM_178123, exon 18 of 18)	3' UTR (NM_178123, exon 18 of 18)	-58591	NM_173648	285025	Hs.324341	NM_173648	ENSG00000163492	CCDC141	CAMDI	coiled-coil domain containing 141	protein-coding
12.7333-10	chr7	40199042	40199197	+	0.1	NA	intron (NM_024728, intron 6 of 14)	intron (NM_024728, intron 6 of 14)	64143	NM_001193312	79783	Hs.586313	NM_024728	ENSG00000175600	SUGCT	C7orf10|DERP13|GA3|ORF19	succinyl-CoA:glutarate-CoA transferase	protein-coding
39.8667	chr3	167698075	167698642	+	0.1	NA	intron (NM_145859, intron 4 of 8)	intron (NM_145859, intron 4 of 8)	36484	NM_145860	11235	Hs.478150	NM_007217	ENSG00000114209	PDCD10	CCM3|TFAR15	programmed cell death 10	protein-coding
44.6667	chr10	112169115	112169957	+	0.1	NA	intron (NM_001244949, intron 9 of 21)	intron (NM_001244949, intron 9 of 21)	14229	NM_020918	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
29.1667-2	chr13	33092995	33093424	+	0.1	NA	Intergenic	LTR104_Mam|LTR|Gypsy	76786	NM_004795	9365	Hs.524953	NM_004795	ENSG00000133116	KL	HFTC3	klotho	protein-coding
9.4-6	chr6	24760931	24761088	+	0.1	NA	Intergenic	Intergenic	-13928	NM_015895	51053	Hs.234896	NM_015895	ENSG00000112312	GMNN	Gem|MGORS6	geminin DNA replication inhibitor	protein-coding
14.8333-3	chr11	85667004	85667237	+	0.1	NA	Intergenic	FLAM_C|SINE|Alu	-1991	NM_001039618	58487	Hs.535319	NM_021212	ENSG00000137504	CREBZF	SMILE|ZF	CREB/ATF bZIP transcription factor	protein-coding
28.0667-3	chr13	111912693	111913143	+	0.1	NA	Intergenic	Intergenic	19422	NR_120401	101928616	Hs.528450	NR_046992		LINC00354	-	long intergenic non-protein coding RNA 354	ncRNA
27.7-12	chr5	154109450	154110020	+	0.1	NA	Intergenic	Intergenic	70768	NM_001135037	4238	Hs.432818	NM_005927	ENSG00000037749	MFAP3	-	microfibril associated protein 3	protein-coding
22.4-11	chr19	29364467	29364866	+	0.1	NA	intron (NR_040029, intron 9 of 9)	intron (NR_040029, intron 9 of 9)	-151515	NM_006003	7386	Hs.743307	NM_006003	ENSG00000169021	UQCRFS1	RIP1|RIS1|RISP|UQCR5	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	protein-coding
14.4667-6	chr5	159305580	159305751	+	0.1	NA	Intergenic	MER57C2|LTR|ERV1	24808	NM_002187	3593	Hs.674	NM_002187	ENSG00000113302	IL12B	CLMF|CLMF2|IL-12B|IMD28|IMD29|NKSF|NKSF2	interleukin 12B	protein-coding
13-2	chr12	20381473	20381717	+	0.1	NA	intron (NM_000921, intron 1 of 15)	intron (NM_000921, intron 1 of 15)	12350	NM_000921	5139	Hs.386791	NM_000921	ENSG00000172572	PDE3A	CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB	phosphodiesterase 3A	protein-coding
18.1667-8	chr3	33556035	33556368	+	0.1	NA	intron (NM_001365634, intron 26 of 35)	intron (NM_001365634, intron 26 of 35)	103478	NM_001207044	23122	Hs.108614	NM_015097	ENSG00000163539	CLASP2	-	cytoplasmic linker associated protein 2	protein-coding
24.5333-12	chr5	110561271	110561546	+	0.1	NA	intron (NM_001039763, intron 11 of 13)	MIRb|SINE|MIR	-47493	NR_031644	100302159		NR_031644	ENSG00000221436	MIR548F3	MIR548F-3|MIRN548F3|hsa-mir-548f-3	microRNA 548f-3	ncRNA
15.1667-6	chr2	71747762	71748106	+	0.1	NA	Intergenic	MIR|SINE|MIR	281235	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|LGMDR2|MMD1	dysferlin	protein-coding
28.7333-5	chr10	91369634	91370115	+	0.1	NA	intron (NR_024467, intron 3 of 4)	intron (NR_024467, intron 3 of 4)	-39361	NM_001348365	143279	Hs.596096	NM_173497	ENSG00000165338	HECTD2	-	HECT domain E3 ubiquitin protein ligase 2	protein-coding
21-5	chr2	208485975	208486361	+	0.1	NA	intron (NM_005048, intron 10 of 12)	MLT1E1A|LTR|ERVL-MaLR	-56474	NR_136588	101927960	Hs.159960	NR_136588		LOC101927960	-	uncharacterized LOC101927960	ncRNA
36.6-5	chr2	180339715	180340106	+	0.1	NA	Intergenic	MER61-int|LTR|ERV1	-332613	NM_020943	57703	Hs.311363	NM_020943	ENSG00000163510	CWC22	EIF4GL|NCM|fSAPb	CWC22 spliceosome associated protein homolog	protein-coding
19.7-2	chr10	41857333	41857779	+	0.1	NA	Intergenic	(ATGGA)n|Simple_repeat|Simple_repeat	510489	NR_024380	441666	Hs.255729	NR_024380	ENSG00000215146	LOC441666	-	zinc finger protein 91 pseudogene	pseudo
24.9667-13	chr8	115072815	115073064	+	0.1	NA	Intergenic	MLT1E1|LTR|ERVL-MaLR	595074	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
21.9333-3	chr1	226289278	226289673	+	0.1	NA	intron (NM_001366240, intron 2 of 12)	AluJo|SINE|Alu	19689	NM_001366245	286826	Hs.120817	NM_173083	ENSG00000183814	LIN9	BARA|BARPsv|Lin-9|TGS|TGS1|TGS2	lin-9 DREAM MuvB core complex component	protein-coding
16.9-11	chr8	31004273	31004509	+	0.1	NA	intron (NM_001323312, intron 2 of 2)	MamGypsy2-I|LTR|Gypsy	28410	NM_013357	29942	Hs.373778	NM_013357	ENSG00000172733	PURG	PURG-A|PURG-B|PURGA|PURGB	purine rich element binding protein G	protein-coding
23.0667-3	chr11	6865963	6866274	+	0.1	NA	Intergenic	L1MD1|LINE|L1	-3637	NM_001004460	341276	Hs.371762	NM_001004460	ENSG00000170790	OR10A2	OR10A2P|OR11-82|OR11-86|OST363	olfactory receptor family 10 subfamily A member 2	protein-coding
24.7333-2	chr10	64045820	64046341	+	0.1	NA	Intergenic	BLACKJACK|DNA|hAT-Blackjack	-524190	NM_001322258	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding
14.8-14	chr6	99293388	99293603	+	0.1	NA	intron (NR_144463, intron 4 of 5)	intron (NR_144463, intron 4 of 5)	56179	NM_032511	84553	Hs.573245	NM_032511	ENSG00000146267	FAXC	C6orf168|dJ273F20	failed axon connections homolog, metaxin like GST domain containing	protein-coding
24.2333-12	chr8	28326847	28327435	+	0.1	NA	intron (NM_006228, intron 1 of 3)	L1ME2|LINE|L1	9873	NM_006228	5368	Hs.88218	NM_006228	ENSG00000168081	PNOC	N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ	prepronociceptin	protein-coding
15.5667-10	chr5	3338631	3338849	+	0.1	NA	Intergenic	Intergenic	-114076	NR_147000	105374624	Hs.518991	NR_147000	ENSG00000249830	LINC02162	-	long intergenic non-protein coding RNA 2162	ncRNA
12.2-6	chr20	38986852	38987085	+	0.1	NA	intron (NM_021931, intron 4 of 21)	intron (NM_021931, intron 4 of 21)	24624	NR_033905	60625	Hs.444520	NM_021931	ENSG00000101452	DHX35	C20orf15|DDX35|KAIA0875	DEAH-box helicase 35	protein-coding
22.2667-8	chr5	158985677	158985978	+	0.1	NA	intron (NM_182708, intron 5 of 14)	intron (NM_182708, intron 5 of 14)	112129	NM_001364158	1879	Hs.573143	NM_024007	ENSG00000164330	EBF1	COE1|EBF|O/E-1|OLF1	EBF transcription factor 1	protein-coding
33.1667	chr1	67458215	67458638	+	0.1	NA	Intergenic	Tigger8|DNA|TcMar-Tigger	-28024	NM_015640	26135	Hs.530412	NM_015640	ENSG00000142864	SERBP1	CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1	SERPINE1 mRNA binding protein 1	protein-coding
27.7667	chr20	31553648	31554116	+	0.1	NA	intron (NM_178580, intron 7 of 12)	intron (NM_178580, intron 7 of 12)	19381	NR_046853	100874042	Hs.373741	NR_046853	ENSG00000230613	HM13-AS1	-	HM13 antisense RNA 1	ncRNA
28.8333-3	chr5	65728401	65728850	+	0.1	NA	intron (NM_020726, intron 1 of 12)	L1M5|LINE|L1	6420	NM_020726	57486	Hs.247460	NM_020726	ENSG00000123213	NLN	AGTBP|EP24.16|MEP|MOP	neurolysin	protein-coding
14.0667-11	chr8	104769332	104769511	+	0.1	NA	Intergenic	Intergenic	-180397	NM_001135703	29967	Hs.600630	NM_013437	ENSG00000147650	LRP12	MIG13A|ST7	LDL receptor related protein 12	protein-coding
45.5-3	chr7	132837099	132837789	+	0.1	NA	intron (NR_133671, intron 7 of 10)	intron (NR_133671, intron 7 of 10)	78474	NR_134332	100506937	Hs.98247	NR_134332	ENSG00000225881	LOC100506937	-	uncharacterized LOC100506937	ncRNA
45.9-2	chr2	48394297	48395024	+	0.1	NA	Intergenic	MIR|SINE|MIR	-46106	NM_001135629	129285	Hs.654619	NM_152994	ENSG00000162869	PPP1R21	CCDC128|KLRAQ1	protein phosphatase 1 regulatory subunit 21	protein-coding
36.5333-2	chr10	67634251	67634672	+	0.1	NA	intron (NM_001127384, intron 2 of 17)	L1PA11|LINE|L1	31199	NM_001291133	29119	Hs.21375	NM_013266	ENSG00000183230	CTNNA3	ARVD13|VR22	catenin alpha 3	protein-coding
16.0667-6	chr15	25025653	25025904	+	0.1	NA	intron (NR_146177, intron 23 of 147)	intron (NR_146177, intron 23 of 147)	-6095	NR_146168	100506965	Hs.592473	NR_146168		PWAR6	HBT8|PAR-6	Prader Willi/Angelman region RNA 6	ncRNA
30.2-4	chr17	77808800	77809410	+	0.1	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	74982	NR_028337	400624	Hs.514521	NM_001001685	ENSG00000204283	LINC01973	-	long intergenic non-protein coding RNA 1973	ncRNA
13.1667-4	chr12	54786364	54786514	+	0.1	NA	Intergenic	L1M2|LINE|L1	-68077	NM_058173	118430	Hs.348419	NM_058173	ENSG00000172551	MUCL1	SBEM	mucin like 1	protein-coding
27.8-11	chr5	27379962	27380528	+	0.1	NA	Intergenic	Intergenic	-92047	NR_038848	643401	Hs.533212	NR_038848	ENSG00000250337	PURPL	LINC01021	p53 upregulated regulator of p53 levels	ncRNA
17.1667-4	chr11	94617738	94618014	+	0.1	NA	intron (NM_152431, intron 16 of 19)	intron (NM_152431, intron 16 of 19)	50508	NM_152431	143689	Hs.660188	NM_152431	ENSG00000134627	PIWIL4	HIWI2|MIWI2	piwi like RNA-mediated gene silencing 4	protein-coding
24.8667-8	chr4	172519362	172519754	+	0.1	NA	intron (NM_001034845, intron 5 of 12)	intron (NM_001034845, intron 5 of 12)	169359	NR_125895	101928314	Hs.566023	NR_125894		GALNTL6-AS1	-	GALNTL6 antisense RNA 1	ncRNA
12.7-11	chrX	30858300	30858566	+	0.1	NA	intron (NM_152787, intron 5 of 10)	intron (NM_152787, intron 5 of 10)	23810	NR_145449	727682		NR_145449		TAB3-AS1	CXorf29	TAB3 antisense RNA 1	ncRNA
18.1-10	chr2	64357841	64358301	+	0.1	NA	Intergenic	Intergenic	-17223	NR_106995	102465833		NR_106995	ENSG00000264297	MIR4433B	hsa-mir-4433b	microRNA 4433b	ncRNA
46-3	chr7	86180507	86181188	+	0.1	NA	Intergenic	Intergenic	-463062	NM_001363522	2913	Hs.590575	NM_000840	ENSG00000198822	GRM3	GLUR3|GPRC1C|MGLUR3|mGlu3	glutamate metabotropic receptor 3	protein-coding
15.4333	chr1	25622529	25622776	+	0.1	NA	intron (NM_020379, intron 1 of 11)	intron (NM_020379, intron 1 of 11)	5184	NM_001289010	57134	Hs.197043	NM_020379	ENSG00000117643	MAN1C1	HMIC|MAN1A3|MAN1C|pp6318	mannosidase alpha class 1C member 1	protein-coding
27.5333-5	chr14	67820242	67820679	+	0.1	NA	intron (NM_133509, intron 1 of 10)	intron (NM_133509, intron 1 of 10)	681	NM_002877	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
19.8333-14	chr5	156326594	156326972	+	0.1	NA	promoter-TSS (NM_000337)	promoter-TSS (NM_000337)	26	NM_000337	6444	Hs.387207	NM_000337	ENSG00000170624	SGCD	35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD	sarcoglycan delta	protein-coding
20.4-10	chr5	32933155	32933365	+	0.1	NA	Intergenic	Intergenic	-14183	NR_033832	340113	Hs.434404	NR_033832	ENSG00000248279	LINC02120	-	long intergenic non-protein coding RNA 2120	ncRNA
41.3-2	chr12	112495724	112496237	+	0.1	NA	intron (NM_001330437, intron 13 of 15)	L1MC3|LINE|L1	77033	NM_080601	5781	Hs.506852	NM_002834	ENSG00000179295	PTPN11	BPTP3|CFC|JMML|METCDS|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2	protein tyrosine phosphatase non-receptor type 11	protein-coding
8.6-3	chr2	217632857	217632995	+	0.1	NA	intron (NR_026597, intron 1 of 12)	Tigger3a|DNA|TcMar-Tigger	123667	NR_026597	729582	Hs.572788	NR_026597		DIRC3	-	disrupted in renal carcinoma 3	ncRNA
12.8333-3	chr10	49048807	49049003	+	0.1	NA	intron (NM_001031746, intron 5 of 7)	LTR108d_Mam|LTR|ERVL	-63318	NR_036182	100422895		NR_036182	ENSG00000264800	MIR4294	-	microRNA 4294	ncRNA
13.5333-14	chr3	84742791	84742926	+	0.1	NA	intron (NR_033860, intron 11 of 20)	intron (NR_033860, intron 11 of 20)	126717	NR_033860	440970	Hs.411049	NR_033860	ENSG00000242641	LINC00971	-	long intergenic non-protein coding RNA 971	ncRNA
33.1333-8	chr4	29086273	29086727	+	0.1	NA	Intergenic	Intergenic	89716	NR_146499	102723764		NR_146499		LINC02364	-	long intergenic non-protein coding RNA 2364	ncRNA
24.4-10	chr19	43689475	43689998	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-19390	NM_001005376	5329	Hs.466871	NM_002659	ENSG00000011422	PLAUR	CD87|U-PAR|UPAR|URKR	plasminogen activator, urokinase receptor	protein-coding
21.6-15	chr5	145682646	145683038	+	0.1	NA	Intergenic	Intergenic	152500	NM_182960	153768	Hs.314261	NM_138492	ENSG00000186314	PRELID2	-	PRELI domain containing 2	protein-coding
41.0667-5	chr4	94552236	94552802	+	0.1	NA	intron (NM_001011516, intron 3 of 9)	intron (NM_001011516, intron 3 of 9)	100577	NM_001256427	10611	Hs.480311	NM_006457	ENSG00000163110	PDLIM5	ENH|ENH1|L9|LIM	PDZ and LIM domain 5	protein-coding
8.36667-2	chr16	73871495	73871579	+	0.1	NA	Intergenic	Intergenic	343984	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA
7.1-5	chrX	85157866	85157998	+	0.1	NA	intron (NM_001367858, intron 2 of 11)	intron (NM_001367858, intron 2 of 11)	-48964	NM_001012980	340562	Hs.640783	NM_001012980	ENSG00000184788	SATL1	-	spermidine/spermine N1-acetyl transferase like 1	protein-coding
21.7-3	chr16	24515321	24515596	+	0.1	NA	Intergenic	ERVL-E-int|LTR|ERVL	-24108	NM_006910	5930	Hs.188553	NM_006910	ENSG00000122257	RBBP6	MY038|P2P-R|PACT|RBQ-1|SNAMA	RB binding protein 6, ubiquitin ligase	protein-coding
33.2	chr10	91049116	91049617	+	0.1	NA	intron (NR_047467, intron 3 of 3)	intron (NR_047467, intron 3 of 3)	3558	NR_047467	100874184	Hs.512240	NR_047467		LINC00502	-	long intergenic non-protein coding RNA 502	ncRNA
12.2-4	chr16	5577769	5577984	+	0.1	NA	Intergenic	Intergenic	38374	NR_110902	101926950	Hs.613285	NR_110902	ENSG00000260338	LINC01570	-	long intergenic non-protein coding RNA 1570	ncRNA
16.8-8	chr6	66629620	66629824	+	0.1	NA	Intergenic	Intergenic	841843	NR_026540	442229	Hs.390414	NR_026540		SLC25A51P1	MCART3P|bA707M13.1	SLC25A51 pseudogene 1	pseudo
25.1	chr16	23684206	23684752	+	0.1	NA	intron (NM_005030, intron 5 of 9)	AluJo|SINE|Alu	5590	NM_005030	5347	Hs.592049	NM_005030	ENSG00000166851	PLK1	PLK|STPK13	polo like kinase 1	protein-coding
18.1-15	chrX	76307047	76307313	+	0.1	NA	Intergenic	L1PA4|LINE|L1	-120530	NM_020932	57692	Hs.8453	NM_020932	ENSG00000198934	MAGEE1	DAMAGE|HCA1	MAGE family member E1	protein-coding
10.0667	chr1	179091991	179092091	+	0.1	NA	intron (NM_022371, intron 4 of 5)	intron (NM_022371, intron 4 of 5)	9971	NM_022371	64222	Hs.584957	NM_022371	ENSG00000186283	TOR3A	ADIR|ADIR2	torsin family 3 member A	protein-coding
17.8667-11	chr4	163663207	163663553	+	0.1	NA	intron (NM_001166373, intron 4 of 7)	L1MEd|LINE|L1	-49846	NM_017923	55016	Hs.592804	NM_017923	ENSG00000145416	MARCH1	MARCH-I|RNF171	membrane associated ring-CH-type finger 1	protein-coding
15.9333-2	chr1	115144809	115145068	+	0.1	NA	Intergenic	Intergenic	-55435	NM_005725	10100	Hs.310458	NM_005725	ENSG00000134198	TSPAN2	NET3|TSN2|TSPAN-2	tetraspanin 2	protein-coding
11.4667-7	chr7	99021346	99021460	+	0.1	NA	intron (NR_110102, intron 1 of 5)	L1M4c|LINE|L1	8238	NR_110102	101927550	Hs.636663	NR_110102		LOC101927550	-	uncharacterized LOC101927550	ncRNA
13.7-2	chr12	113253535	113253709	+	0.1	NA	intron (NM_001351347, intron 1 of 26)	MLT1G1|LTR|ERVL-MaLR	9254	NM_001351347	53373	Hs.524763	NM_017901	ENSG00000186815	TPCN1	TPC1	two pore segment channel 1	protein-coding
25.9667	chr10	4615911	4616265	+	0.1	NA	Intergenic	MER21B|LTR|ERVL	-40068	NR_015425	338588	Hs.121365	NR_015425		LINC00705	-	long intergenic non-protein coding RNA 705	ncRNA
39.2667-2	chr15	79684350	79684932	+	0.1	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	212356	NR_037654	10588	Hs.194294	NM_006441	ENSG00000136371	MTHFS	HsT19268|NEDMEHM	methenyltetrahydrofolate synthetase	protein-coding
19.7333-9	chr8	119197318	119197781	+	0.1	NA	Intergenic	AluJo|SINE|Alu	-10814	NM_052886	114569	Hs.201083	NM_052886	ENSG00000147676	MAL2	-	mal, T cell differentiation protein 2 (gene/pseudogene)	protein-coding
22.5333-20	chrX	111987787	111988040	+	0.1	NA	intron (NM_012471, intron 1 of 10)	MLT2B4|LTR|ERVL	94863	NM_012471	7224	Hs.657709	NM_012471	ENSG00000072315	TRPC5	PPP1R159|TRP5	transient receptor potential cation channel subfamily C member 5	protein-coding
42.0667-2	chr12	111793572	111794404	+	0.1	NA	intron (NM_000690, intron 9 of 12)	L1MC2|LINE|L1	-5846	NR_106819	102465456		NR_106819	ENSG00000274697	MIR6761	hsa-mir-6761	microRNA 6761	ncRNA
15.6-2	chr11	116232399	116232680	+	0.1	NA	Intergenic	Intergenic	-406883	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LINC02702	-	long intergenic non-protein coding RNA 2702	ncRNA
34.1333	chr1	179404421	179404888	+	0.1	NA	intron (NR_073544, intron 11 of 25)	L1M2|LINE|L1	38610	NR_073544	126859	Hs.658505	NM_144696	ENSG00000162779	AXDND1	C1orf125	axonemal dynein light chain domain containing 1	protein-coding
37.3667	chr1	87930573	87931238	+	0.1	NA	Intergenic	Intergenic	-559250	NR_038324	100505768	Hs.125247	NR_038324	ENSG00000227290	LINC01364	-	long intergenic non-protein coding RNA 1364	ncRNA
14.0667-7	chr2	113073512	113073705	+	0.1	NA	intron (NM_032556, intron 1 of 3)	intron (NM_032556, intron 1 of 3)	1290	NM_032556	84639	Hs.306974	NM_032556	ENSG00000136697	IL1F10	FIL1-theta|FKSG75|IL-1HY2|IL-38|IL1-theta|IL1HY2	interleukin 1 family member 10	protein-coding
13.7333	chr16	87750118	87750352	+	0.1	NA	intron (NM_001184856, intron 4 of 10)	intron (NM_001184856, intron 4 of 10)	15751	NM_017566	54758	Hs.123450	NM_017566	ENSG00000104731	KLHDC4	-	kelch domain containing 4	protein-coding
28.0333-5	chr21	31430418	31430878	+	0.1	NA	intron (NM_001353690, intron 1 of 27)	intron (NM_001353690, intron 1 of 27)	-86294	NM_001353694	7074	Hs.517228	NM_003253	ENSG00000156299	TIAM1	TIAM-1	T cell lymphoma invasion and metastasis 1	protein-coding
46.8333	chr3	26345159	26345716	+	0.1	NA	Intergenic	Intergenic	-277369	NM_052953	116135	Hs.517868	NM_052953	ENSG00000179796	LRRC3B	LRP15	leucine rich repeat containing 3B	protein-coding
25.7333-11	chr6	19830501	19830852	+	0.1	NA	Intergenic	Intergenic	-6694	NM_001546	3400	Hs.519601	NM_001546	ENSG00000172201	ID4	IDB4|bHLHb27	inhibitor of DNA binding 4, HLH protein	protein-coding
41.5667	chr4	152828148	152828850	+	0.1	NA	intron (NM_001287433, intron 2 of 8)	L1MC1|LINE|L1	48545	NM_001025595	27236	Hs.416089	NM_014447	ENSG00000164144	ARFIP1	HSU52521	ADP ribosylation factor interacting protein 1	protein-coding
11.9-5	chr4	187299059	187299269	+	0.1	NA	Intergenic	Intergenic	-71484	NR_149103	105377602	Hs.582096	NR_149103	ENSG00000250042	LINC02514	-	long intergenic non-protein coding RNA 2514	ncRNA
16.6333-8	chr5	31286745	31286958	+	0.1	NA	intron (NM_001362435, intron 2 of 10)	L2b|LINE|L2	93165	NM_001362435	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
14.5-7	chr2	194114319	194114615	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-229802	NR_110222	101927406	Hs.385793	NR_110222	ENSG00000225539	LINC01821	-	long intergenic non-protein coding RNA 1821	ncRNA
13.7-5	chr6	163239095	163239289	+	0.1	NA	intron (NM_001080379, intron 4 of 4)	MIRc|SINE|MIR	-47190	NR_122120	729658	Hs.728991	NR_122120		PACRG-AS3	-	PACRG antisense RNA 3	ncRNA
24.3667-8	chr3	108887173	108887597	+	0.1	NA	Intergenic	Intergenic	64599	NM_016388	50852	Hs.138701	NM_016388	ENSG00000163519	TRAT1	HSPC062|TCRIM|TRIM|pp29/30	T cell receptor associated transmembrane adaptor 1	protein-coding
40.4-7	chr9	128554891	128555370	+	0.1	NA	intron (NM_003127, intron 1 of 55)	MIRc|SINE|MIR	2543	NM_001130438	6709	Hs.372331	NM_003127	ENSG00000197694	SPTAN1	EIEE5|NEAS|SPTA2	spectrin alpha, non-erythrocytic 1	protein-coding
29.1-12	chr9	73359244	73359688	+	0.1	NA	Intergenic	Intergenic	207601	NM_000700	301	Hs.494173	NM_000700	ENSG00000135046	ANXA1	ANX1|LPC1	annexin A1	protein-coding
20.9333-9	chr2	175739967	175740468	+	0.1	NA	Intergenic	L1MC5|LINE|L1	262050	NM_030650	80856	Hs.209561	NM_030650	ENSG00000144320	LNPK	KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless	lunapark, ER junction formation factor	protein-coding
8.6-2	chr14	64474478	64474647	+	0.1	NA	TTS (NM_004857)	TTS (NM_004857)	9063	NM_004857	9495	Hs.656683	NM_004857	ENSG00000179841	AKAP5	AKAP75|AKAP79|H21	A-kinase anchoring protein 5	protein-coding
15.8-7	chr17	53682284	53682577	+	0.1	NA	Intergenic	L1PREC2|LINE|L1	-140497	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
18-6	chr14	103996657	103996854	+	0.1	NA	intron (NM_153046, intron 12 of 35)	L2a|LINE|L2	-54226	NM_001257268	647286	Hs.632325	NM_001257268	ENSG00000227729	RD3L	TDRD9-AS1|TDRD9AS1	retinal degeneration 3 like	protein-coding
20.1333-12	chr22	25186421	25186738	+	0.1	NA	intron (NM_001145206, intron 9 of 10)	AluJr|SINE|Alu	-13279	NM_004076	1417	Hs.533022	NM_004076	ENSG00000100053	CRYBB3	CATCN2|CRYB3|CTRCT22	crystallin beta B3	protein-coding
13.7-4	chr5	40840517	40840701	+	0.1	NA	promoter-TSS (NM_032587)	promoter-TSS (NM_032587)	-758	NM_032587	84674	Hs.200242	NM_032587	ENSG00000132357	CARD6	CINCIN1	caspase recruitment domain family member 6	protein-coding
23.3667-15	chr8	37642203	37642587	+	0.1	NA	Intergenic	Intergenic	-53387	NM_025069	80139	Hs.288042	NM_025069	ENSG00000183779	ZNF703	NLZ1|ZEPPO1|ZNF503L|ZPO1	zinc finger protein 703	protein-coding
29.2-8	chr4	138671867	138672461	+	0.1	NA	Intergenic	Intergenic	340482	NR_133945	105377448	Hs.200280	NR_133945	ENSG00000250195	LOC105377448	-	uncharacterized LOC105377448	ncRNA
14-10	chr3	57837148	57837342	+	0.1	NA	intron (NM_001304420, intron 2 of 21)	L2b|LINE|L2	-52669	NM_001311178	7871	Hs.476432	NM_007159	ENSG00000163681	SLMAP	SLAP	sarcolemma associated protein	protein-coding
24.5667-12	chr5	29477188	29477744	+	0.1	NA	Intergenic	Intergenic	-81490	NR_104628	101929681	Hs.549659	NR_104628		LINC02064	-	long intergenic non-protein coding RNA 2064	ncRNA
23.2-12	chr3	23899170	23899485	+	0.1	NA	intron (NM_020345, intron 4 of 4)	L1MD1|LINE|L1	-17218	NM_001253384	6138	Hs.381219	NM_002948	ENSG00000174748	RPL15	DBA12|EC45|L15|RPL10|RPLY10|RPYL10	ribosomal protein L15	protein-coding
26.2333-8	chr17	62051888	62052211	+	0.1	NA	intron (NM_005121, intron 3 of 29)	intron (NM_005121, intron 3 of 29)	13229	NM_005121	9969	Hs.282678	NM_005121	ENSG00000108510	MED13	ARC250|DRIP250|HSPC221|THRAP1|TRAP240	mediator complex subunit 13	protein-coding
15.9667-9	chr2	221699500	221699735	+	0.1	NA	Intergenic	L2c|LINE|L2	-125415	NM_001304536	2043	Hs.371218	NM_004438	ENSG00000116106	EPHA4	EK8|HEK8|SEK|TYRO1	EPH receptor A4	protein-coding
27-17	chr3	20684352	20684806	+	0.1	NA	Intergenic	L2a|LINE|L2	342111	NR_110814	101927829	Hs.639381	NR_110814	ENSG00000231304	LOC101927829	-	uncharacterized LOC101927829	ncRNA
15.3333-8	chr3	112679066	112679313	+	0.1	NA	Intergenic	L1ME1|LINE|L1	-38046	NM_199511	151887	Hs.477128	NM_199511	ENSG00000091986	CCDC80	CL2|DRO1|SSG1|URB|okuribin	coiled-coil domain containing 80	protein-coding
23.5-17	chr8	125846783	125847138	+	0.1	NA	Intergenic	Intergenic	104237	NR_038447	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA
18.9333-15	chr7	80781296	80781637	+	0.1	NA	intron (NM_006379, intron 12 of 17)	intron (NM_006379, intron 12 of 17)	134813	NM_001289908	948	Hs.120949	NM_000072	ENSG00000135218	CD36	BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3	CD36 molecule	protein-coding
18.6-13	chr2	172789814	172790049	+	0.1	NA	intron (NM_007023, intron 1 of 30)	L1MB1|LINE|L1	-31656	NM_001100397	11069	Hs.470646	NM_007023	ENSG00000091428	RAPGEF4	CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496	Rap guanine nucleotide exchange factor 4	protein-coding
31.8333-2	chr2	198937282	198937722	+	0.1	NA	Intergenic	L1MC4a|LINE|L1	520437	NM_001172509	23314	Hs.516617	NM_015265	ENSG00000119042	SATB2	GLSS	SATB homeobox 2	protein-coding
27.0333-8	chr5	30236197	30236614	+	0.1	NA	Intergenic	MER57A-int|LTR|ERV1	355845	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
25.5-9	chr8	64624326	64624678	+	0.1	NA	exon (NM_001324112, exon 2 of 7)	exon (NM_001324112, exon 2 of 7)	-42610	NR_152770	401463	Hs.651960	NR_015374	ENSG00000254102	LOC401463	-	uncharacterized LOC401463	ncRNA
19.5667-9	chr7	2793287	2793522	+	0.1	NA	intron (NM_007353, intron 2 of 3)	L1MC4a|LINE|L1	21826	NM_001282441	2768	Hs.487341	NM_007353	ENSG00000146535	GNA12	NNX3|RMP|gep	G protein subunit alpha 12	protein-coding
29.9667	chr10	95755629	95756024	+	0.1	NA	promoter-TSS (NM_001164183)	promoter-TSS (NM_001164183)	174	NM_001164181	953	Hs.576612	NM_001776	ENSG00000138185	ENTPD1	ATPDase|CD39|NTPDase-1|SPG64	ectonucleoside triphosphate diphosphohydrolase 1	protein-coding
14.7333-3	chr12	27728106	27728345	+	0.1	NA	intron (NM_001190864, intron 5 of 6)	L1MB7|LINE|L1	17393	NM_021821	60488	Hs.714076	NM_021821	ENSG00000061794	MRPS35	HDCMD11P|MDS023|MRP-S28|MRPS28	mitochondrial ribosomal protein S35	protein-coding
26-5	chr5	3466593	3467043	+	0.1	NA	intron (NR_033898, intron 2 of 4)	L1ME1|LINE|L1	14002	NR_147000	105374624	Hs.518991	NR_147000	ENSG00000249830	LINC02162	-	long intergenic non-protein coding RNA 2162	ncRNA
19.1333-13	chr9	133423516	133423836	+	0.1	NA	intron (NM_139027, intron 2 of 28).2	intron (NM_139027, intron 2 of 28).2	1309	NM_139026	11093	Hs.131433	NM_139025	ENSG00000160323	ADAMTS13	ADAM-TS13|ADAMTS-13|C9orf8|VWFCP|vWF-CP	ADAM metallopeptidase with thrombospondin type 1 motif 13	protein-coding
17.2333	chr1	112316158	112316408	+	0.1	NA	Intergenic	Intergenic	-79931	NM_018704	55917	Hs.744100	NM_018704	ENSG00000143079	CTTNBP2NL	-	CTTNBP2 N-terminal like	protein-coding
11.6	chr1	41623024	41623150	+	0.1	NA	intron (NM_024503, intron 3 of 8)	intron (NM_024503, intron 3 of 8)	-138404	NM_001302269	1907	Hs.1407	NM_001956	ENSG00000127129	EDN2	ET-2|ET2|PPET2	endothelin 2	protein-coding
20.8667-7	chr20	51558365	51558769	+	0.1	NA	intron (NM_001258292, intron 1 of 9)	intron (NM_001258292, intron 1 of 9)	4272	NM_001258294	4773	Hs.744148	NM_012340	ENSG00000101096	NFATC2	NFAT1|NFATP	nuclear factor of activated T cells 2	protein-coding
29.5667-10	chr5	123491357	123491717	+	0.1	NA	Intergenic	Intergenic	-20562	NM_001031812	1456	Hs.129206	NM_004384	ENSG00000151292	CSNK1G3	CKI-gamma 3|CSNK1G3L	casein kinase 1 gamma 3	protein-coding
19.4667-3	chr12	57581856	57582173	+	0.1	NA	intron (NM_004984, intron 26 of 28)	intron (NM_004984, intron 26 of 28)	-9178	NM_001146258	79837	Hs.745011	NM_024779	ENSG00000166908	PIP4K2C	PIP5K2C	phosphatidylinositol-5-phosphate 4-kinase type 2 gamma	protein-coding
12.4333-10	chr4	80126067	80126292	+	0.1	NA	Intergenic	Intergenic	-52707	NM_001286780	118429	Hs.162963	NM_058172	ENSG00000163297	ANTXR2	CMG-2|CMG2|HFS|ISH|JHF	ANTXR cell adhesion molecule 2	protein-coding
4.6	chr11	64642150	64642223	+	0.1	NA	intron (NM_015080, intron 17 of 22)	intron (NM_015080, intron 17 of 22)	1359	NM_138734	9379	Hs.372938	NM_015080	ENSG00000110076	NRXN2	-	neurexin 2	protein-coding
30.1-7	chr3	134735640	134736043	+	0.1	NA	Intergenic	L1ME3G|LINE|L1	-59419	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding
19.4-3	chr10	94457461	94457721	+	0.1	NA	intron (NM_015188, intron 2 of 12)	L1MC1|LINE|L1	55050	NM_015188	23232	Hs.500598	NM_015188	ENSG00000108239	TBC1D12	-	TBC1 domain family member 12	protein-coding
26.8333-6	chr4	175660494	175660870	+	0.1	NA	intron (NM_001261447, intron 1 of 4)	intron (NM_001261447, intron 1 of 4)	126994	NM_001261448	2823	Hs.75819	NM_005277	ENSG00000150625	GPM6A	GPM6|M6A	glycoprotein M6A	protein-coding
13.3333-4	chr13	107142103	107142277	+	0.1	NA	Intergenic	Intergenic	178773	NR_145739	109616978		NR_145739	ENSG00000201847	SNORD31B	-	small nucleolar RNA, C/D box 31B	snoRNA
13.4333-10	chr7	44367609	44367839	+	0.1	NA	Intergenic	L1M2a|LINE|L1	-42093	NM_172079	816	Hs.351887	NM_001220	ENSG00000058404	CAMK2B	CAM2|CAMK2|CAMKB|MRD54	calcium/calmodulin dependent protein kinase II beta	protein-coding
14.9333	chr1	193652808	193653087	+	0.1	NA	Intergenic	L1MA9|LINE|L1	348202	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
42.7667	chr1	205492194	205492724	+	0.1	NA	Intergenic	Intergenic	-12210	NM_212503	5129	Hs.445402	NM_002596	ENSG00000117266	CDK18	PCTAIRE|PCTAIRE3|PCTK3	cyclin dependent kinase 18	protein-coding
13.0667-6	chr2	33925367	33925509	+	0.1	NA	intron (NR_126403, intron 2 of 5)	intron (NR_126403, intron 2 of 5)	-141788	NR_132381	106144585	Hs.580486	NR_132381	ENSG00000237790	LINC01318	-	long intergenic non-protein coding RNA 1318	ncRNA
27.4333-3	chr11	48043253	48043602	+	0.1	NA	intron (NM_001098503, intron 1 of 8)	intron (NM_001098503, intron 1 of 8)	-53355	NR_036119	100423000		NR_036119	ENSG00000263693	MIR3161	-	microRNA 3161	ncRNA
21.9667-7	chr3	45132914	45133174	+	0.1	NA	intron (NM_178181, intron 1 of 3)	MLT1E3|LTR|ERVL-MaLR	13334	NM_022842	64866	Hs.476093	NM_022842	ENSG00000163814	CDCP1	CD318|SIMA135|TRASK	CUB domain containing protein 1	protein-coding
32.6333-2	chr12	127446297	127446829	+	0.1	NA	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-106491	NR_110057	101927616	Hs.637827	NR_110057	ENSG00000256362	LINC02375	-	long intergenic non-protein coding RNA 2375	ncRNA
45.6667-2	chr2	95500022	95500653	+	0.1	NA	Intergenic	Intergenic	-15606	NM_001164464	653192	Hs.723811	NM_001164464	ENSG00000144010	TRIM43B	-	tripartite motif containing 43B	protein-coding
29.7-3	chr10	96205608	96206227	+	0.1	NA	TTS (NR_138482)	TTS (NR_138482)	65599	NM_001258440	29760	Hs.665244	NM_013314	ENSG00000095585	BLNK	AGM4|BASH|BLNK-S|LY57|SLP-65|SLP65|bca	B cell linker	protein-coding
16.7333-14	chr6	131316714	131316965	+	0.1	NA	Intergenic	L2c|LINE|L2	66435	NM_004842	9465	Hs.486483	NM_004842	ENSG00000118507	AKAP7	AKAP15|AKAP18	A-kinase anchoring protein 7	protein-coding
23.3333-10	chr5	127255267	127255805	+	0.1	NA	Intergenic	LTR8B|LTR|ERV1	-35228	NM_001308121	84466	Hs.438709	NM_032446	ENSG00000145794	MEGF10	EMARDD	multiple EGF like domains 10	protein-coding
36.8333-3	chr15	36441343	36442035	+	0.1	NA	Intergenic	LTR78|LTR|ERV1	-137937	NM_001321757	84529	Hs.48348	NM_032499	ENSG00000186073	C15orf41	HH114	chromosome 15 open reading frame 41	protein-coding
25.5667	chr1	214857350	214857788	+	0.1	NA	Intergenic	L1MC5a|LINE|L1	-147973	NM_001017424	3776	Hs.497745	NM_014217	ENSG00000082482	KCNK2	K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e	potassium two pore domain channel subfamily K member 2	protein-coding
7.96667	chr10	53829056	53829135	+	0.1	NA	intron (NM_001354411, intron 31 of 34)	intron (NM_001354411, intron 31 of 34)	-657135	NR_134503	105378311	Hs.623892	NR_134503	ENSG00000234173	LOC105378311	-	uncharacterized LOC105378311	ncRNA
20.2333-5	chr13	31350149	31350407	+	0.1	NA	Intergenic	MIR|SINE|MIR	150303	NM_194318	145173	Hs.13205	NM_194318	ENSG00000187676	B3GLCT	B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T	beta 3-glucosyltransferase	protein-coding
20.3-9	chr2	200163315	200163771	+	0.1	NA	Intergenic	Intergenic	-142336	NM_015535	26010	Hs.120323	NM_015535	ENSG00000196141	SPATS2L	DNAPTP6|SGNP	spermatogenesis associated serine rich 2 like	protein-coding
33.0333-2	chr1	47623042	47623701	+	0.1	NA	Intergenic	Intergenic	-186054	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA
28.1-4	chr14	20336539	20336907	+	0.1	NA	Intergenic	L1PB1|LINE|L1	-3411	NM_182849	57820	Hs.107003	NM_021178	ENSG00000100814	CCNB1IP1	C14orf18|HEI10	cyclin B1 interacting protein 1	protein-coding
24.5667-10	chr22	48196740	48197124	+	0.1	NA	Intergenic	THE1B|LTR|ERVL-MaLR	-77432	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA
22.1333-6	chr14	31452531	31452914	+	0.1	NA	non-coding (NR_110045, exon 4 of 4)	non-coding (NR_110045, exon 4 of 4)	4784	NM_080664	112487	Hs.116014	NM_080664	ENSG00000129480	DTD2	ATD|C14orf126	D-aminoacyl-tRNA deacylase 2	protein-coding
14.5333-6	chr2	148373042	148373267	+	0.1	NA	intron (NM_018328, intron 5 of 14)	intron (NM_018328, intron 5 of 14)	-271597	NM_015630	26122	Hs.23270	NM_015630	ENSG00000135999	EPC2	EPC-LIKE	enhancer of polycomb homolog 2	protein-coding
36.1667-3	chr12	45334224	45334857	+	0.1	NA	intron (NM_001025356, intron 3 of 19)	MLT1L|LTR|ERVL-MaLR	41850	NM_001142678	196527	Hs.505339	NM_001025356	ENSG00000177119	ANO6	BDPLT7|SCTS|TMEM16F	anoctamin 6	protein-coding
10.1667-6	chr5	20076314	20076506	+	0.1	NA	intron (NM_001291956, intron 2 of 14)	intron (NM_001291956, intron 2 of 14)	-88210	NM_001349563	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
16.6-8	chr4	15551232	15551694	+	0.1	NA	intron (NM_001080522, intron 19 of 37)	L1MEd|LINE|L1	81581	NM_001164720	57545	Hs.590928	NM_020785	ENSG00000048342	CC2D2A	JBTS9|MKS6	coiled-coil and C2 domain containing 2A	protein-coding
22.6333-10	chr2	14903744	14904048	+	0.1	NA	Intergenic	Intergenic	271179	NR_144632	151354	Hs.260855	NM_145175	ENSG00000162981	LRATD1	FAM84A|NSE1|PP11517	LRAT domain containing 1	protein-coding
21.2333-12	chr7	45006479	45006732	+	0.1	NA	intron (NM_001363459, intron 1 of 9)	AluYm1|SINE|Alu	6404	NM_001363459	83605	Hs.148272	NM_031443	ENSG00000136280	CCM2	C7orf22|OSM|PP10187	CCM2 scaffold protein	protein-coding
29.9667-5	chr2	186703990	186704364	+	0.1	NA	intron (NM_177454, intron 1 of 7)	intron (NM_177454, intron 1 of 7)	10117	NM_177454	165215	Hs.28872	NM_177454	ENSG00000144369	FAM171B	KIAA1946	family with sequence similarity 171 member B	protein-coding
28.7667	chr15	50856649	50857189	+	0.1	NA	Intergenic	Intergenic	-51764	NM_007347	23431	Hs.413366	NM_007347	ENSG00000081014	AP4E1	CPSQ4|SPG51|STUT1	adaptor related protein complex 4 subunit epsilon 1	protein-coding
34.8333	chr1	186889977	186890325	+	0.1	NA	intron (NM_024420, intron 3 of 17)	intron (NM_024420, intron 3 of 17)	61202	NM_001311193	5321	Hs.497200	NM_024420	ENSG00000116711	PLA2G4A	GURDP|PLA2G4|cPLA2|cPLA2-alpha	phospholipase A2 group IVA	protein-coding
35.1333-7	chr4	12160143	12160697	+	0.1	NA	Intergenic	L1MA1|LINE|L1	-63031	NR_125910	101929019	Hs.434234	NR_125910	ENSG00000251210	LINC02270	-	long intergenic non-protein coding RNA 2270	ncRNA
27.5667-3	chr2	16567759	16568076	+	0.1	NA	intron (NM_030797, intron 3 of 11)	intron (NM_030797, intron 3 of 11)	97917	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding
15.5-7	chr3	18671103	18671397	+	0.1	NA	Intergenic	MamRep605|LTR?|LTR?	-225658	NM_001322874	6304	Hs.517717	NM_002971	ENSG00000182568	SATB1	-	SATB homeobox 1	protein-coding
33.7	chr1	43226045	43226597	+	0.1	NA	intron (NM_001195831, intron 17 of 23)	MLT1G|LTR|ERVL-MaLR	-43662	NM_001320244	128218	Hs.104476	NM_144626	ENSG00000179178	TMEM125	-	transmembrane protein 125	protein-coding
24.3-3	chr11	120467731	120468263	+	0.1	NA	intron (NM_015313, intron 29 of 40)	MER58A|DNA|hAT-Charlie	-43749	NM_014619	2900	Hs.538738	NM_014619	ENSG00000149403	GRIK4	EAA1|GRIK|GluK4|KA1	glutamate ionotropic receptor kainate type subunit 4	protein-coding
23.4-4	chr3	37367431	37367762	+	0.1	NA	TTS (NM_002078)	TTS (NM_002078)	-18673	NM_178344	339883	Hs.475945	NM_178339	ENSG00000198590	C3orf35	APRG1	chromosome 3 open reading frame 35	protein-coding
13.7667	chr1	167134113	167134332	+	0.1	NA	Intergenic	MIR|SINE|MIR	40147	NM_001080426	92235	Hs.632462	NM_001080426	ENSG00000198842	DUSP27	-	dual specificity phosphatase 27, atypical	protein-coding
25.1333-17	chr8	101387009	101387356	+	0.1	NA	Intergenic	LTR88c|LTR|Gypsy?	18289	NR_002182	83955	Hs.567608	NM_032031	ENSG00000228224	NACA4P	FKSG17|NACAP1	NACA family member 4, pseudogene	pseudo
24.2333-8	chr3	24856768	24857097	+	0.1	NA	intron (NM_001290216, intron 1 of 10)	intron (NM_001290216, intron 1 of 10)	27609	NM_001290216	5915	Hs.543218	NM_000965	ENSG00000077092	RARB	HAP|MCOPS12|NR1B2|RARbeta1|RRB2	retinoic acid receptor beta	protein-coding
8.06667	chr5	10870581	10870670	+	0.1	NA	Intergenic	Intergenic	-109391	NM_001291963	1611	Hs.75189	NM_004394	ENSG00000112977	DAP	-	death associated protein	protein-coding
21.9333-12	chr21	30945302	30945771	+	0.1	NA	Intergenic	MER5A|DNA|hAT-Charlie	-63956	NM_175858	337880	Hs.407654	NM_175858	ENSG00000182591	KRTAP11-1	HACL-1|HACL1|KAP11.1	keratin associated protein 11-1	protein-coding
17.0667-8	chr20	37196713	37196983	+	0.1	NA	intron (NM_001324306, intron 2 of 15)	intron (NM_001324306, intron 2 of 15)	-17300	NM_152503	140699	Hs.349125	NM_152503	ENSG00000101353	MROH8	C20orf131|C20orf132	maestro heat like repeat family member 8	protein-coding
13.2667	chr1	100804926	100805227	+	0.1	NA	Intergenic	Intergenic	85334	NM_001078	7412	Hs.109225	NM_001078	ENSG00000162692	VCAM1	CD106|INCAM-100	vascular cell adhesion molecule 1	protein-coding
38.9667-7	chr5	67122247	67122780	+	0.1	NA	intron (NM_001297651, intron 11 of 25)	intron (NM_001297651, intron 11 of 25)	74286	NM_005582	4064	Hs.87205	NM_005582	ENSG00000134061	CD180	LY64|Ly78|RP105	CD180 molecule	protein-coding
27.8-3	chr1	231685361	231685874	+	0.1	NA	intron (NM_001164556, intron 1 of 4)	AluSx4|SINE|Alu	58802	NM_001164556	27185	Hs.13318	NM_018662	ENSG00000162946	DISC1	C1orf136|SCZD9	DISC1 scaffold protein	protein-coding
25.9-14	chr9	137289914	137290453	+	0.1	NA	Intergenic	AluJr|SINE|Alu	12088	NM_001004354	441478	Hs.535075	NM_001004354	ENSG00000198435	NRARP	-	NOTCH regulated ankyrin repeat protein	protein-coding
11.6667-4	chr14	61319402	61319583	+	0.1	NA	Intergenic	Intergenic	-1951	NM_006255	5583	Hs.333907	NM_006255	ENSG00000027075	PRKCH	PKC-L|PKCL|PRKCL|nPKC-eta	protein kinase C eta	protein-coding
38.1667	chr10	21642985	21643441	+	0.1	NA	intron (NM_001195626, intron 8 of 22)	AluSz|SINE|Alu	109041	NM_001195626	8028	Hs.30385	NM_004641	ENSG00000078403	MLLT10	AF10	MLLT10 histone lysine methyltransferase DOT1L cofactor	protein-coding
12.5667-11	chr9	137516761	137517001	+	0.1	NA	intron (NM_001098537, intron 11 of 34)	intron (NM_001098537, intron 11 of 34)	33521	NM_152286	375775	Hs.294147	NM_152286	ENSG00000130653	PNPLA7	C9orf111|NTE-R1|NTEL1	patatin like phospholipase domain containing 7	protein-coding
15.8667-5	chr2	53706103	53706406	+	0.1	NA	intron (NM_001201965, intron 6 of 8)	intron (NM_001201965, intron 6 of 8)	-61529	NM_001346127	494143	Hs.585944	NM_001008708	ENSG00000143942	CHAC2	GCG1	ChaC cation transport regulator homolog 2	protein-coding
12.1-6	chr15	70999683	70999867	+	0.1	NA	intron (NM_017691, intron 11 of 15)	L1M4|LINE|L1	107332	NM_001199018	54839	Hs.12692	NM_017691	ENSG00000137821	LRRC49	PGs4	leucine rich repeat containing 49	protein-coding
37.7-3	chr2	112536108	112536646	+	0.1	NA	3' UTR (NM_153712, exon 7 of 7)	3' UTR (NM_153712, exon 7 of 7)	-5538	NM_001137604	84172	Hs.745127	NM_019014	ENSG00000125630	POLR1B	RPA135|RPA2|Rpo1-2	RNA polymerase I subunit B	protein-coding
26.3-5	chr12	55327110	55327600	+	0.1	NA	Intergenic	L1MC5|LINE|L1	-4346	NM_054104	254786	Hs.553653	NM_054104	ENSG00000205329	OR6C3	OST709	olfactory receptor family 6 subfamily C member 3	protein-coding
35.3667-3	chr4	9900373	9900842	+	0.1	NA	intron (NM_001001290, intron 9 of 12)	intron (NM_001001290, intron 9 of 12)	118973	NM_000798	1816	Hs.380681	NM_000798	ENSG00000169676	DRD5	DBDR|DRD1B|DRD1L2	dopamine receptor D5	protein-coding
20.3333-10	chr14	31115653	31116138	+	0.1	NA	intron (NM_015382, intron 30 of 42)	intron (NM_015382, intron 30 of 42)	89252	NM_001254728	11154	Hs.293411	NM_007077	ENSG00000100478	AP4S1	AP47B|CLA20|CLAPS4|CPSQ6|SPG52	adaptor related protein complex 4 subunit sigma 1	protein-coding
13.5-4	chr16	83537416	83537657	+	0.1	NA	intron (NM_001220489, intron 6 of 12)	intron (NM_001220489, intron 6 of 12)	29190	NR_036147	100422853		NR_036147	ENSG00000263785	MIR3182	mir-3182	microRNA 3182	ncRNA
15.9667-15	chr9	74359469	74359726	+	0.1	NA	Intergenic	Intergenic	-11934	NR_121182	101927358	Hs.559523	NR_121182	ENSG00000227809	LOC101927358	-	uncharacterized LOC101927358	ncRNA
41.3-7	chr7	97774781	97775644	+	0.1	NA	Intergenic	L2|LINE|L2	43126	NM_013996	6863	Hs.2563	NM_003182	ENSG00000006128	TAC1	Hs.2563|NK2|NKNA|NPK|TAC2	tachykinin precursor 1	protein-coding
40.8667-4	chr7	34840914	34841477	+	0.1	NA	intron (NM_207172, intron 6 of 8)	intron (NM_207172, intron 6 of 8)	-6864	NR_015356	404744	Hs.487951	NM_207283	ENSG00000197085	NPSR1-AS1	AAA1	NPSR1 antisense RNA 1	ncRNA
23.0333-10	chr4	57432000	57432419	+	0.1	NA	intron (NR_125907, intron 3 of 5)	MIR|SINE|MIR	6337	NR_125907	101928851	Hs.555072	NR_125907	ENSG00000248505	LINC02380	-	long intergenic non-protein coding RNA 2380	ncRNA
32.8667-6	chr7	9932839	9933199	+	0.1	NA	Intergenic	AluSg|SINE|Alu	298749	NR_002790	168741	Hs.545134	NR_002790		PER4	-	period circadian regulator 3 pseudogene	pseudo
41.9333-4	chr5	134743294	134743860	+	0.1	NA	intron (NM_001745, intron 2 of 3)	AluSx3|SINE|Alu	5029	NM_001745	819	Hs.529846	NM_001745	ENSG00000164615	CAMLG	CAML|GET2	calcium modulating ligand	protein-coding
11.5-7	chr2	44248519	44248676	+	0.1	NA	Intergenic	L1PA6|LINE|L1	-26883	NM_000341	6519	Hs.112916	NM_000341	ENSG00000138079	SLC3A1	ATR1|CSNU1|D2H|NBAT|RBAT	solute carrier family 3 member 1	protein-coding
20.2667-13	chr8	144423920	144424276	+	0.1	NA	exon (NM_183057, exon 9 of 9)	exon (NM_183057, exon 9 of 9)	4450	NM_016208	51160	Hs.418175	NM_016208	ENSG00000160948	VPS28	-	VPS28 subunit of ESCRT-I	protein-coding
11	chr11	21404292	21404523	+	0.1	NA	intron (NM_201551, intron 15 of 18)	intron (NM_201551, intron 15 of 18)	734821	NM_006157	4745	Hs.657172	NM_006157	ENSG00000165973	NELL1	IDH3GL|NRP1	neural EGFL like 1	protein-coding
24.4333-4	chr2	11299647	11299988	+	0.1	NA	intron (NM_001321643, intron 1 of 32)	intron (NM_001321643, intron 1 of 32)	44819	NM_004850	9475	Hs.681743	NM_004850	ENSG00000134318	ROCK2	ROCK-II	Rho associated coiled-coil containing protein kinase 2	protein-coding
30.3-6	chr6	54218258	54218735	+	0.1	NA	TTS (NM_001281746)	TTS (NM_001281746)	-89945	NM_014464	27283	Hs.127011	NM_014464	ENSG00000137251	TINAG	TIN-AG	tubulointerstitial nephritis antigen	protein-coding
16.9333-8	chr13	55724789	55725053	+	0.1	NA	Intergenic	Intergenic	550467	NR_049804	100846996		NR_049804	ENSG00000264387	MIR5007	-	microRNA 5007	ncRNA
35.5-4	chr6	101396937	101397426	+	0.1	NA	Intergenic	Intergenic	-1804	NM_175768	2898	Hs.98262	NM_021956	ENSG00000164418	GRIK2	EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6	glutamate ionotropic receptor kainate type subunit 2	protein-coding
8.16667	chr1	32110828	32110909	+	0.1	NA	intron (NM_012316, intron 1 of 13)	AluSx|SINE|Alu	2812	NM_012316	23633	Hs.470588	NM_012316	ENSG00000025800	KPNA6	IPOA7|KPNA7	karyopherin subunit alpha 6	protein-coding
20.3333-12	chr17	10264384	10264719	+	0.1	NA	Intergenic	Intergenic	-65945	NM_201433	8522	Hs.462214	NM_003644	ENSG00000007237	GAS7	-	growth arrest specific 7	protein-coding
16.6667-12	chr4	95133280	95133602	+	0.1	NA	intron (NM_001256792, intron 8 of 10)	intron (NM_001256792, intron 8 of 10)	41950	NM_001256794	658	Hs.598475	NM_001203	ENSG00000138696	BMPR1B	ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293	bone morphogenetic protein receptor type 1B	protein-coding
13.9333-4	chr2	78734196	78734417	+	0.1	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	188775	NR_136312	105374820	Hs.570225	NR_136311		LOC105374820	-	uncharacterized LOC105374820	ncRNA
17.9-12	chr7	2034779	2035051	+	0.1	NA	intron (NM_001013837, intron 12 of 18)	intron (NM_001013837, intron 12 of 18)	54137	NR_145797	109623488		NR_145797		SNORA114	-	small nucleolar RNA, H/ACA box 114	snoRNA
41.6333	chr14	78138385	78139070	+	0.1	NA	Intergenic	Intergenic	-31646	NR_073547	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
15.1333-3	chr11	10045041	10045356	+	0.1	NA	intron (NM_030962, intron 2 of 39)	AluSx1|SINE|Alu	206056	NR_120539	101928008	Hs.585524	NR_120539	ENSG00000255476	LOC101928008	-	uncharacterized LOC101928008	ncRNA
18.4667	chr10	76510950	76511248	+	0.1	NA	intron (NM_001305581, intron 6 of 6)	LTR52|LTR|ERVL	-376945	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA
14.6667	chr10	57844506	57844663	+	0.1	NA	Intergenic	Intergenic	423310	NM_152230	253430	Hs.30280	NM_152230	ENSG00000151151	IPMK	-	inositol polyphosphate multikinase	protein-coding
13.9667	chr13	33099765	33100030	+	0.1	NA	Intergenic	Intergenic	83474	NM_004795	9365	Hs.524953	NM_004795	ENSG00000133116	KL	HFTC3	klotho	protein-coding
20.9667-6	chr2	111883228	111883509	+	0.1	NA	intron (NM_022662, intron 1 of 47)	intron (NM_022662, intron 1 of 47)	825	NM_022662	64682	Hs.436527	NM_022662	ENSG00000153107	ANAPC1	APC1|MCPR|TSG24	anaphase promoting complex subunit 1	protein-coding
18.8667-14	chr9	122246011	122246402	+	0.1	NA	intron (NR_027125, intron 4 of 6)	AluJo|SINE|Alu	-17249	NM_014368	26468	Hs.103137	NM_014368	ENSG00000106852	LHX6	LHX6.1	LIM homeobox 6	protein-coding
41.0667-4	chr4	47399896	47400492	+	0.1	NA	intron (NM_000812, intron 5 of 8)	intron (NM_000812, intron 5 of 8)	63508	NM_017845	54951	Hs.23956	NM_017845	ENSG00000169019	COMMD8	-	COMM domain containing 8	protein-coding
37.6333	chr10	121378093	121378654	+	0.1	NA	Intergenic	MamRep137|DNA|TcMar-Tigger	152941	NM_001320654	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding
16.3-10	chr4	55944384	55944730	+	0.1	NA	Intergenic	HERV4_I-int|LTR|ERV1	-4388	NM_025009	9662	Hs.518767	NM_014645	ENSG00000174799	CEP135	CEP4|KIAA0635|MCPH8	centrosomal protein 135	protein-coding
39.8333-2	chr14	46353775	46354230	+	0.1	NA	intron (NR_102702, intron 3 of 3)	intron (NR_102702, intron 3 of 3)	-117357	NR_102699	100506412	Hs.207545	NR_102699	ENSG00000258700	LINC00871	-	long intergenic non-protein coding RNA 871	ncRNA
8.36667	chr12	1681613	1681701	+	0.1	NA	Intergenic	Intergenic	-9413	NM_024551	79602	Hs.371642	NM_024551	ENSG00000006831	ADIPOR2	ACDCR2|PAQR2	adiponectin receptor 2	protein-coding
35.4-8	chr8	66081339	66081993	+	0.1	NA	intron (NM_001349432, intron 5 of 5)	LTR84a|LTR|ERVL	-45463	NM_033058	84675	Hs.85524	NM_033058	ENSG00000147573	TRIM55	MURF-2|RNF29|muRF2	tripartite motif containing 55	protein-coding
11.3-6	chr6	51815334	51815460	+	0.1	NA	intron (NM_138694, intron 52 of 66)	L2c|LINE|L2	193527	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
10.0333-7	chr8	102392131	102392335	+	0.1	NA	intron (NM_001282873, intron 1 of 58)	MER41A|LTR|ERV1	20456	NM_001282873	51366	Hs.492445	NM_015902	ENSG00000104517	UBR5	DD5|EDD|EDD1|HYD	ubiquitin protein ligase E3 component n-recognin 5	protein-coding
20.1667-6	chr2	228472382	228472598	+	0.1	NA	Intergenic	AluSx|SINE|Alu	138905	NR_151716	101928765	Hs.334040	NR_151716	ENSG00000232023	LINC01807	-	long intergenic non-protein coding RNA 1807	ncRNA
25.3333-9	chr20	33189422	33189827	+	0.1	NA	Intergenic	Intergenic	-3981	NR_026760	317716	Hs.434194	NM_173859	ENSG00000183566	BPIFA4P	BASE	BPI fold containing family A member 4, pseudogene	pseudo
27.1-5	chr2	173712326	173712748	+	0.1	NA	Intergenic	Intergenic	251343	NM_001017371	6670	Hs.531587	NM_003111	ENSG00000172845	SP3	SPR2	Sp3 transcription factor	protein-coding
12.3333-11	chr3	178482810	178482970	+	0.1	NA	Intergenic	Intergenic	-53546	NM_181361	10242	Hs.478368	NM_005832	ENSG00000197584	KCNMB2	-	potassium calcium-activated channel subfamily M regulatory beta subunit 2	protein-coding
9.03333-5	chr3	156060886	156060976	+	0.1	NA	Intergenic	L1ME1|LINE|L1	-59617	NM_172160	7881	Hs.654519	NM_003471	ENSG00000169282	KCNAB1	AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3	potassium voltage-gated channel subfamily A member regulatory beta subunit 1	protein-coding
26.3-2	chr1	181720042	181720393	+	0.1	NA	exon (NM_001205294, exon 14 of 46)	exon (NM_001205294, exon 14 of 46)	236700	NM_001205294	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding
20.3-8	chr2	17678056	17678448	+	0.1	NA	intron (NM_024624, intron 24 of 26)	intron (NM_024624, intron 24 of 26)	75558	NM_001142286	79677	Hs.526728	NM_024624	ENSG00000163029	SMC6	SMC-6|SMC6L1|hSMC6	structural maintenance of chromosomes 6	protein-coding
19.9667-5	chr15	57953851	57954129	+	0.1	NA	3' UTR (NM_001206897, exon 14 of 14)	3' UTR (NM_001206897, exon 14 of 14)	60033	NM_170697	8854	Hs.643455	NM_003888	ENSG00000128918	ALDH1A2	RALDH(II)|RALDH2|RALDH2-T	aldehyde dehydrogenase 1 family member A2	protein-coding
35.9667	chr12	6153217	6153721	+	0.1	NA	Intergenic	L1M5|LINE|L1	-28794	NM_000552	7450	Hs.440848	NM_000552	ENSG00000110799	VWF	F8VWF|VWD	von Willebrand factor	protein-coding
43.2667-2	chr11	63689226	63689923	+	0.1	NA	intron (NR_049750, intron 1 of 5)	intron (NR_049750, intron 1 of 5)	8074	NM_201430	10313	Hs.743229	NM_006054	ENSG00000133318	RTN3	ASYIP|HAP|NSPL2|NSPLII|RTN3-A1	reticulon 3	protein-coding
19.6-9	chr2	54192181	54192553	+	0.1	NA	intron (NM_138448, intron 3 of 3)	intron (NM_138448, intron 3 of 3)	63862	NM_001003937	388951	Hs.620508	NM_001003937	ENSG00000178021	TSPYL6	-	TSPY like 6	protein-coding
17.1667-10	chr2	81409033	81409384	+	0.1	NA	Intergenic	Intergenic	57738	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
8.7-2	chr5	74228062	74228207	+	0.1	NA	Intergenic	MIRb|SINE|MIR	80191	NR_105009	102503429	Hs.519391	NR_105009	ENSG00000248942	LINC01335	-	long intergenic non-protein coding RNA 1335	ncRNA
17.3667-3	chr10	81557040	81557332	+	0.1	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	-318008	NM_001370083	10718	Hs.125119	NM_001010848	ENSG00000185737	NRG3	HRG3|pro-NRG3	neuregulin 3	protein-coding
18.1333-12	chr3	184097286	184097691	+	0.1	NA	5' UTR (NM_001256613, exon 1 of 9)	5' UTR (NM_001256613, exon 1 of 9)	424	NM_198313	285242	Hs.449179	NM_182589	ENSG00000186038	HTR3E	5-HT3-E|5-HT3E|5-HT3c1	5-hydroxytryptamine receptor 3E	protein-coding
35.0333-3	chr17	61222342	61222744	+	0.1	NA	intron (NM_001330413, intron 23 of 25)	intron (NM_001330413, intron 23 of 25)	145161	NR_136397	101927855	Hs.662123	NR_136397	ENSG00000267131	LOC101927855	-	uncharacterized LOC101927855	ncRNA
19.0333-12	chr5	56580873	56581265	+	0.1	NA	intron (NR_161255, intron 1 of 5)	intron (NR_161255, intron 1 of 5)	25187	NR_161255	101928448	Hs.208052	NM_001287053	ENSG00000225940	C5orf67	-	chromosome 5 open reading frame 67	ncRNA
28.7333-7	chr17	28118983	28119382	+	0.1	NA	intron (NM_016231, intron 1 of 10)	intron (NM_016231, intron 1 of 10)	76505	NM_016231	51701	Hs.208759	NM_016231	ENSG00000087095	NLK	-	nemo like kinase	protein-coding
17.7667-8	chr2	224421158	224421590	+	0.1	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-19267	NM_001122779	79843	Hs.147585	NM_024785	ENSG00000124019	FAM124B	-	family with sequence similarity 124 member B	protein-coding
35.3-2	chr11	113816017	113816475	+	0.1	NA	intron (NM_001346268, intron 9 of 20)	AluSc|SINE|Alu	36450	NM_001101389	644672	Hs.705360	NM_001101389	ENSG00000228607	CLDN25	-	claudin 25	protein-coding
24.7667-8	chr5	31181275	31181695	+	0.1	NA	Intergenic	Intergenic	-12201	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
9.83333	chr4	93426354	93426543	+	0.1	NA	intron (NM_001286838, intron 9 of 14)	intron (NM_001286838, intron 9 of 14)	-402305	NM_005172	474	Hs.532680	NM_005172	ENSG00000172238	ATOH1	ATH1|HATH1|MATH-1|bHLHa14	atonal bHLH transcription factor 1	protein-coding
22.6-6	chr14	62894795	62895208	+	0.1	NA	intron (NM_139318, intron 7 of 10)	intron (NM_139318, intron 7 of 10)	150457	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
27.5333-13	chr5	144598104	144598591	+	0.1	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	392956	NM_001370486	57528	Hs.7093	NM_020768	ENSG00000183775	KCTD16	-	potassium channel tetramerization domain containing 16	protein-coding
24.7-11	chr5	8445377	8445681	+	0.1	NA	intron (NR_039984, intron 2 of 5)	MER4A|LTR|ERV1	12035	NR_039984	729506	Hs.566412	NR_039984	ENSG00000245729	LINC02226	-	long intergenic non-protein coding RNA 2226	ncRNA
24.5333-2	chr12	15767051	15767455	+	0.1	NA	intron (NM_004447, intron 1 of 20)	intron (NM_004447, intron 1 of 20)	22135	NM_004447	2059	Hs.591160	NM_004447	ENSG00000151491	EPS8	DFNB102	epidermal growth factor receptor pathway substrate 8	protein-coding
15.6667-7	chr7	6665483	6665750	+	0.1	NA	Intergenic	Intergenic	28298	NM_001278559	100131017	Hs.112668	NM_001278559	ENSG00000205903	ZNF316	MZF-3	zinc finger protein 316	protein-coding
33.5667-6	chr20	12169354	12169985	+	0.1	NA	Intergenic	L1ME2|LINE|L1	251776	NM_014962	22903	Hs.709366	NM_014962	ENSG00000132640	BTBD3	dJ742J24.1	BTB domain containing 3	protein-coding
26.8667-6	chr2	231198254	231198761	+	0.1	NA	promoter-TSS (NM_001352756)	promoter-TSS (NM_001352756)	-124	NM_001352755	80210	Hs.162411	NM_025139	ENSG00000135931	ARMC9	ARM|JBTS30|KU-MEL-1|NS21	armadillo repeat containing 9	protein-coding
58.1-3	chr9	31815070	31816303	+	0.1	NA	Intergenic	L1PA7|LINE|L1	-434196	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
31.7667	chr10	114236694	114237218	+	0.1	NA	Intergenic	MER72|LTR|ERV1	-2298	NM_001272046	340706	Hs.197741	NM_198496	ENSG00000165816	VWA2	AMACO|CCSP-2|CCSP2|NET42	von Willebrand factor A domain containing 2	protein-coding
26.1-3	chr10	56132740	56133346	+	0.1	NA	Intergenic	L1MA9|LINE|L1	228216	NM_007057	11130	Hs.591363	NM_007057	ENSG00000122952	ZWINT	HZwint-1|KNTC2AP|SIP30|ZWINT1	ZW10 interacting kinetochore protein	protein-coding
18.9-7	chr2	113272816	113273077	+	0.1	NA	intron (NM_013952, intron 2 of 11)	intron (NM_013952, intron 2 of 11)	5975	NM_003466	7849	Hs.469728	NM_003466	ENSG00000125618	PAX8	-	paired box 8	protein-coding
18.2667-9	chr2	27514579	27514954	+	0.1	NA	intron (NM_001486, intron 16 of 18)	L1MC4|LINE|L1	17927	NM_001486	2646	Hs.89771	NM_001486	ENSG00000084734	GCKR	FGQTL5|GKRP	glucokinase regulator	protein-coding
18.7667-8	chr2	47067322	47067529	+	0.1	NA	intron (NM_001288951, intron 20 of 20)	intron (NM_001288951, intron 20 of 20)	87883	NM_001163561	285051	Hs.531575	NM_173649	ENSG00000239605	STPG4	C2orf61|GSE	sperm-tail PG-rich repeat containing 4	protein-coding
10.5667-4	chr7	36046239	36046386	+	0.1	NA	Intergenic	Intergenic	-48998	NR_108089	101928618	Hs.561704	NR_108089	ENSG00000261184	LOC101928618	-	uncharacterized LOC101928618	ncRNA
33.6333-4	chr2	62742533	62743083	+	0.1	NA	intron (NM_001142615, intron 2 of 22)	intron (NM_001142615, intron 2 of 22)	35911	NM_001354217	23301	Hs.271667	NM_015252	ENSG00000115504	EHBP1	HPC12|NACSIN	EH domain binding protein 1	protein-coding
24.2-4	chr16	76063386	76063869	+	0.1	NA	Intergenic	Intergenic	-213774	NM_001322189	85445	Hs.461389	NM_033401	ENSG00000152910	CNTNAP4	CASPR4	contactin associated protein like 4	protein-coding
42.3-4	chr4	107210644	107211422	+	0.1	NA	Intergenic	Intergenic	-174720	NM_014421	27123	Hs.211869	NM_014421	ENSG00000155011	DKK2	DKK-2	dickkopf WNT signaling pathway inhibitor 2	protein-coding
8.66667-3	chr3	119434398	119434579	+	0.1	NA	intron (NM_018266, intron 8 of 8)	intron (NM_018266, intron 8 of 8)	29127	NM_018266	55254	Hs.594171	NM_018266	ENSG00000176142	TMEM39A	-	transmembrane protein 39A	protein-coding
17.4667-3	chr1	216402105	216402549	+	0.1	NA	intron (NM_206933, intron 3 of 71)	L1MDa|LINE|L1	21069	NM_007123	7399	Hs.655974	NM_007123	ENSG00000042781	USH2A	RP39|US2|USH2|dJ1111A8.1	usherin	protein-coding
16.2-8	chr2	76413111	76413366	+	0.1	NA	Intergenic	L1MD|LINE|L1	-572727	NR_110284	101927907	Hs.382185	NR_110284	ENSG00000234653	LOC101927907	-	uncharacterized LOC101927907	ncRNA
39.6333	chr12	114460914	114461374	+	0.1	NA	Intergenic	LTR16C|LTR|ERVL	-52702	NM_000192	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box transcription factor 5	protein-coding
33.6667-6	chr3	32501555	32502259	+	0.1	NA	intron (NM_017801, intron 1 of 3)	intron (NM_017801, intron 1 of 3)	945	NM_017801	54918	Hs.380627	NM_017801	ENSG00000091317	CMTM6	CKLFSF6|PRO2219	CKLF like MARVEL transmembrane domain containing 6	protein-coding
31.8-5	chr14	47089974	47090551	+	0.1	NA	intron (NM_001113498, intron 6 of 16)	intron (NM_001113498, intron 6 of 16)	252984	NM_182830	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
22.1667-4	chr20	59341007	59341295	+	0.1	NA	Intergenic	(ATGTGTGTGC)n|Simple_repeat|Simple_repeat	40540	NM_001302456	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding
32.5333-5	chr20	58027443	58027896	+	0.1	NA	Intergenic	Intergenic	23765	NR_147083	105376992	Hs.736662	NR_147083	ENSG00000275852	LINC01742	-	long intergenic non-protein coding RNA 1742	ncRNA
15.3667-5	chr13	22086242	22086395	+	0.1	NA	Intergenic	L4_A_Mam|LINE|RTE-X	-123967	NR_103810	100506622	Hs.255773	NR_103810	ENSG00000276476	LINC00540	-	long intergenic non-protein coding RNA 540	ncRNA
31.2333	chr1	203225925	203226348	+	0.1	NA	intron (NR_045784, intron 2 of 12)	MIRc|SINE|MIR	3537	NR_045784	1118	Hs.201688	NM_003465	ENSG00000133063	CHIT1	CHI3|CHIT|CHITD	chitinase 1	protein-coding
25.4667-8	chr5	173776696	173777183	+	0.1	NA	Intergenic	MER113|DNA|hAT-Charlie	14003	NR_108028	101928154	Hs.366725	NR_108028		LINC01485	-	long intergenic non-protein coding RNA 1485	ncRNA
10.4667-3	chr14	41066628	41066779	+	0.1	NA	intron (NR_109758, intron 3 of 3)	intron (NR_109758, intron 3 of 3)	111992	NR_109758	644919	Hs.434414	NR_109757		LINC02315	-	long intergenic non-protein coding RNA 2315	ncRNA
39.7667-5	chr2	51024590	51025371	+	0.1	NA	intron (NM_004801, intron 2 of 21)	intron (NM_004801, intron 2 of 21)	7152	NM_001330079	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
18.7-4	chr18	60278072	60278382	+	0.1	NA	Intergenic	Intergenic	94548	NM_005912	4160	Hs.532833	NM_005912	ENSG00000166603	MC4R	BMIQ20	melanocortin 4 receptor	protein-coding
14.8	chr1	73788579	73788764	+	0.1	NA	Intergenic	MER70-int|LTR|ERVL	113992	NR_146300	109729166	Hs.563902	NR_146300		LINC02238	-	long intergenic non-protein coding RNA 2238	ncRNA
15.9667-6	chr18	9155168	9155328	+	0.1	NA	intron (NM_001204056, intron 1 of 11)	L1MA2|LINE|L1	17685	NM_001204056	23253	Hs.464585	NM_015208	ENSG00000101745	ANKRD12	ANCO-2|ANCO1|GAC-1|Nbla00144	ankyrin repeat domain 12	protein-coding
27.5667-4	chr4	152220728	152221155	+	0.1	NA	Intergenic	L1MEi|LINE|L1	-116714	NR_104273	102191832	Hs.712524	NR_104273	ENSG00000270751	FBXW7-AS1	DEAR|DEspR	FBXW7 antisense RNA 1	ncRNA
28.3666-3	chr6	74676725	74677469	+	0.1	NA	intron (NR_110856, intron 3 of 3)	intron (NR_110856, intron 3 of 3)	451685	NR_145788	109623475		NR_145788		SNORD156	-	small nucleolar RNA, C/D box 156	snoRNA
16.9667-2	chr11	64023671	64023954	+	0.1	NA	intron (NM_014067, intron 3 of 10)	intron (NM_014067, intron 3 of 10)	37959	NM_017670	55611	Hs.473788	NM_017670	ENSG00000167770	OTUB1	HSPC263|OTB1|OTU1	OTU deubiquitinase, ubiquitin aldehyde binding 1	protein-coding
35.6667-3	chr5	141155302	141155922	+	0.1	NA	promoter-TSS (NR_001280)	promoter-TSS (NR_001280)	-387	NR_001280	54661	Hs.284307	NR_001280	ENSG00000255622	PCDHB17P	ME4|PCDH-psi1|PCDHB17	protocadherin beta 17 pseudogene	pseudo
19.7-4	chr13	44390843	44391075	+	0.1	NA	intron (NR_144535, intron 3 of 3)	intron (NR_144535, intron 3 of 3)	15025	NR_104174	400128	Hs.438480	NR_104174	ENSG00000237361	TUSC8	LINC01071|XLOC_010588	tumor suppressor candidate 8	ncRNA
26.1	chr1	14036295	14036613	+	0.1	NA	Intergenic	Intergenic	287039	NM_001007257	7799	Hs.371823	NM_012231	ENSG00000116731	PRDM2	HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2	PR/SET domain 2	protein-coding
18.9333-8	chr3	88972180	88972418	+	0.1	NA	Intergenic	HAL1b|LINE|L1	-135322	NM_005233	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
11.6667-9	chr7	84191407	84191596	+	0.1	NA	intron (NM_006080, intron 1 of 16)	intron (NM_006080, intron 1 of 16)	3288	NM_006080	10371	Hs.252451	NM_006080	ENSG00000075213	SEMA3A	COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1	semaphorin 3A	protein-coding
21.4667-11	chr9	2761430	2761731	+	0.1	NA	Intergenic	MER57B2|LTR|ERV1	44070	NM_133497	169522	Hs.622675	NM_133497	ENSG00000168263	KCNV2	KV11.1|Kv8.2|RCD3B	potassium voltage-gated channel modifier subfamily V member 2	protein-coding
24.6667-4	chr14	27621976	27622362	+	0.1	NA	intron (NR_039992, intron 3 of 4)	LTR81B|LTR|Gypsy	9581	NR_039992	100505967	Hs.668484	NR_039992	ENSG00000258548	LINC00645	-	long intergenic non-protein coding RNA 645	ncRNA
25.1333-5	chr10	83828755	83829115	+	0.1	NA	Intergenic	L2a|LINE|L2	-151846	NR_134317	105378397	Hs.147725	NR_134317		LINC02650	-	long intergenic non-protein coding RNA 2650	ncRNA
36.8-4	chr15	42322585	42323106	+	0.1	NA	intron (NM_198141, intron 11 of 23)	intron (NM_198141, intron 11 of 23)	-36655	NM_173087	825	Hs.143261	NM_000070	ENSG00000092529	CAPN3	CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94	calpain 3	protein-coding
18.8333-9	chr21	35043461	35043835	+	0.1	NA	intron (NM_001754, intron 2 of 8)	intron (NM_001754, intron 2 of 8)	-4222	NR_026812	80215	Hs.672131	NM_025143		RUNX1-IT1	C21orf96	RUNX1 intronic transcript 1	ncRNA
13.5333-6	chr16	47089081	47089338	+	0.1	NA	intron (NM_001201477, intron 7 of 8)	intron (NM_001201477, intron 7 of 8)	54736	NM_018092	81831	Hs.645802	NM_018092	ENSG00000171208	NETO2	BTCL2|NEOT2	neuropilin and tolloid like 2	protein-coding
16.1333-3	chr14	62040946	62041133	+	0.1	NA	intron (NM_001367661, intron 4 of 8)	MLT2A2|LTR|ERVL	-76318	NR_015358	646113	Hs.445241	NM_001039785		LINC00643	-	long intergenic non-protein coding RNA 643	ncRNA
41.5333-6	chr2	84862239	84862816	+	0.1	NA	intron (NM_001307978, intron 2 of 4)	intron (NM_001307978, intron 2 of 4)	18557	NM_001307978	129293	Hs.469134	NM_001080824	ENSG00000186854	TRABD2A	C2orf89|TIKI1	TraB domain containing 2A	protein-coding
23.6333	chr1	86811453	86812017	+	0.1	NA	Intergenic	Intergenic	102391	NM_004261	9403	Hs.362728	NM_004261	ENSG00000183291	SELENOF	SEP15	selenoprotein F	protein-coding
26.9-5	chr14	47785360	47785669	+	0.1	NA	intron (NR_039996, intron 2 of 2)	intron (NR_039996, intron 2 of 2)	9500	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
17.7333-19	chr8	56556921	56557277	+	0.1	NA	intron (NR_038236, intron 1 of 2)	intron (NR_038236, intron 1 of 2)	2724	NR_038236	100507632	Hs.583755	NR_038236	ENSG00000246430	LINC00968	-	long intergenic non-protein coding RNA 968	ncRNA
27.9-9	chr9	81110224	81110597	+	0.1	NA	Intergenic	MER41E|LTR|ERV1	579125	NM_001303103	7088	Hs.197320	NM_005077	ENSG00000196781	TLE1	ESG|ESG1|GRG1	TLE family member 1, transcriptional corepressor	protein-coding
30.2333-2	chr11	20224545	20224936	+	0.1	NA	Intergenic	L2b|LINE|L2	-64265	NM_001029865	120237		NM_001029865	ENSG00000109851	DBX1	-	developing brain homeobox 1	protein-coding
18.5667-12	chr5	150379562	150379841	+	0.1	NA	exon (NM_001195141, exon 17 of 26)	exon (NM_001195141, exon 17 of 26)	22004	NM_001135244	6949	Hs.519672	NM_000356	ENSG00000070814	TCOF1	MFD1|TCS|TCS1|treacle	treacle ribosome biogenesis factor 1	protein-coding
16.2333-6	chr8	126852929	126853159	+	0.1	NA	Intergenic	Intergenic	-160110	NR_045262	100750225	Hs.571530	NR_045262	ENSG00000253438	PCAT1	PCA1|PCAT-1	prostate cancer associated transcript 1	ncRNA
27.7-10	chr2	240913666	240914003	+	0.1	NA	intron (NM_001351305, intron 1 of 31)	intron (NM_001351305, intron 1 of 31)	7498	NM_001351305	728763	Hs.647892	NM_001351305	ENSG00000226321	CROCC2	-	ciliary rootlet coiled-coil, rootletin family member 2	protein-coding
26.9-11	chr3	6546095	6546409	+	0.1	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	259197	NR_110125	101927347	Hs.333345	NR_110123	ENSG00000226258	GRM7-AS3	-	GRM7 antisense RNA 3	ncRNA
5.86666-2	chr9	128176353	128176480	+	0.1	NA	exon (NM_001131018, exon 11 of 17)	exon (NM_001131018, exon 11 of 17)	15156	NM_001131017	25792	Hs.212395	NM_012127	ENSG00000148337	CIZ1	LSFR1|NP94|ZNF356	CDKN1A interacting zinc finger protein 1	protein-coding
24.7333-4	chr16	80402855	80403362	+	0.1	NA	intron (NR_120307, intron 2 of 5)	intron (NR_120307, intron 2 of 5)	-137626	NM_001305017	83657	Hs.98849	NM_130897	ENSG00000168589	DYNLRB2	DNCL2B|DNLC2B|ROBLD2	dynein light chain roadblock-type 2	protein-coding
52.9-2	chr20	21951031	21951694	+	0.1	NA	Intergenic	L1MA4A|LINE|L1	-102728	NR_038394	100270679	Hs.385748	NR_038394	ENSG00000234435	LINC01432	-	long intergenic non-protein coding RNA 1432	ncRNA
23.8-11	chr4	43738287	43738730	+	0.1	NA	Intergenic	Intergenic	-245965	NR_146993	105374436	Hs.170605	NR_146993	ENSG00000248143	LINC02383	-	long intergenic non-protein coding RNA 2383	ncRNA
25.8-5	chr12	53274343	53274685	+	0.1	NA	intron (NM_012291, intron 6 of 30)	L2a|LINE|L2	6215	NM_012291	9700	Hs.153479	NM_012291	ENSG00000135476	ESPL1	ESP1|SEPA	extra spindle pole bodies like 1, separase	protein-coding
27.7667-4	chr5	26194841	26195326	+	0.1	NA	Intergenic	L1ME2|LINE|L1	843503	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
25.5333-14	chr7	40464660	40465065	+	0.1	NA	intron (NM_024728, intron 11 of 14)	Tigger5b|DNA|TcMar-Tigger	329886	NM_001193312	79783	Hs.586313	NM_024728	ENSG00000175600	SUGCT	C7orf10|DERP13|GA3|ORF19	succinyl-CoA:glutarate-CoA transferase	protein-coding
18.0667-9	chr3	72104230	72104601	+	0.1	NA	Intergenic	LTR82A|LTR|ERVL	-3960	NR_104116	285286	Hs.559386	NR_104116	ENSG00000241163	LINC00877	-	long intergenic non-protein coding RNA 877	ncRNA
33.8333-2	chr11	114140981	114141422	+	0.1	NA	intron (NM_006006, intron 2 of 6)	intron (NM_006006, intron 2 of 6)	77990	NM_001354752	7704	Hs.591945	NM_006006	ENSG00000109906	ZBTB16	PLZF|ZNF145	zinc finger and BTB domain containing 16	protein-coding
39.6667-5	chrX	114011929	114012602	+	0.1	NA	Intergenic	L1MB7|LINE|L1	-74047	NR_131204	105463123	Hs.550218	NR_131204		XACT	-	X active specific transcript	ncRNA
25.1-4	chr18	70927670	70927984	+	0.1	NA	Intergenic	Intergenic	-276873	NR_160904	220158	Hs.448217	NM_178506		GTSCR1	-	Gilles de la Tourette syndrome chromosome region, candidate 1	ncRNA
29.1-13	chrX	35789682	35790094	+	0.1	NA	Intergenic	Intergenic	-8454	NM_001370158	139604		NM_001099921	ENSG00000189023	MAGEB16	-	MAGE family member B16	protein-coding
35.5333-4	chr14	71475573	71476069	+	0.1	NA	intron (NM_001284247, intron 1 of 23)	intron (NM_001284247, intron 1 of 23)	-12040	NR_027046	145474	Hs.658241	NR_027046		LOC145474	-	uncharacterized LOC145474	ncRNA
18.6333-9	chr17	58947601	58947857	+	0.1	NA	intron (NM_014906, intron 1 of 6)	MLT1G1|LTR|ERVL-MaLR	159151	NM_001005207	4591	Hs.579079	NM_015294	ENSG00000108395	TRIM37	MUL|POB1|TEF3	tripartite motif containing 37	protein-coding
41.1333-4	chr15	88824010	88824722	+	0.1	NA	intron (NM_001369268, intron 1 of 18)	intron (NM_001369268, intron 1 of 18)	20923	NM_001135	176	Hs.2159	NM_001135	ENSG00000157766	ACAN	AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK|SSOAOD	aggrecan	protein-coding
16.1333-7	chr16	66233868	66234056	+	0.1	NA	Intergenic	L2c|LINE|L2	-132729	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding
10.7-2	chr12	114354049	114354225	+	0.1	NA	3' UTR (NM_181486, exon 9 of 9)	3' UTR (NM_181486, exon 9 of 9)	52007	NM_181486	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box transcription factor 5	protein-coding
21.3667-15	chr9	104038163	104038425	+	0.1	NA	Intergenic	MIRb|SINE|MIR	38585	NR_109803	101928523		NR_109803	ENSG00000285483	LOC101928523	-	uncharacterized LOC101928523	ncRNA
38.7667-3	chr8	127520672	127521256	+	0.1	NA	Intergenic	L1MD1|LINE|L1	-38825	NR_024393	727677	Hs.673248	NR_024393	ENSG00000246228	CASC8	CARLO1|CARLo-1|LINC00860	cancer susceptibility 8	ncRNA
28.5667	chr1	94907464	94908116	+	0.1	NA	intron (NM_001839, intron 1 of 6)	AluY|SINE|Alu	18018	NM_001286056	1266	Hs.483454	NM_001839	ENSG00000117519	CNN3	-	calponin 3	protein-coding
13.5333-11	chr2	75706817	75706983	+	0.1	NA	intron (NM_001201335, intron 1 of 2)	intron (NM_001201335, intron 1 of 2)	4015	NM_001201334	6936	Hs.303808	NM_003203	ENSG00000005436	GCFC2	C2orf3|DNABF|GCF|TCF9	GC-rich sequence DNA-binding factor 2	protein-coding
29-5	chr15	69259267	69259631	+	0.1	NA	intron (NM_001324091, intron 3 of 4)	L1M2|LINE|L1	-39463	NM_017705	54852	Hs.591096	NM_017705	ENSG00000137819	PAQR5	MPRG	progestin and adipoQ receptor family member 5	protein-coding
19.2333	chr1	107729437	107729683	+	0.1	NA	intron (NM_006113, intron 15 of 26)	intron (NM_006113, intron 15 of 26)	-41061	NM_001079874	10451	Hs.267659	NM_006113	ENSG00000134215	VAV3	-	vav guanine nucleotide exchange factor 3	protein-coding
21.1333-7	chr11	95063073	95063345	+	0.1	NA	Intergenic	L1ME3Cz|LINE|L1	-3668	NR_103726	10929	Hs.476680	NM_032102	ENSG00000263465	SRSF8	DSM-1|SFRS2B|SRP46	serine and arginine rich splicing factor 8	protein-coding
27.5333-8	chr2	219003831	219004296	+	0.1	NA	exon (NM_194302, exon 33 of 35)	exon (NM_194302, exon 33 of 35)	1848	NR_046086	100129175	Hs.147762	NR_046086	ENSG00000224090	LOC100129175	-	uncharacterized LOC100129175	ncRNA
10.3-7	chr2	27647323	27647446	+	0.1	NA	intron (NM_007266, intron 12 of 13)	intron (NM_007266, intron 12 of 13)	-16087	NM_018158	22950	Hs.306000	NM_018158	ENSG00000163798	SLC4A1AP	HLC3	solute carrier family 4 member 1 adaptor protein	protein-coding
10.0667-2	chr1	232800080	232800265	+	0.1	NA	Intergenic	Intergenic	-4720	NM_019090	54627	Hs.160373	NM_019090	ENSG00000212916	MAP10	KIAA1383|MTR120	microtubule associated protein 10	protein-coding
12.4333-2	chr14	29046543	29046741	+	0.1	NA	Intergenic	Intergenic	-260855	NR_135255	105370424	Hs.375809	NR_135255	ENSG00000257056	LINC02282	-	long intergenic non-protein coding RNA 2282	ncRNA
23.0333-7	chr2	153696471	153696979	+	0.1	NA	Intergenic	MER44A|DNA|TcMar-Tigger	-175197	NM_052917	114805	Hs.470277	NM_052917	ENSG00000144278	GALNT13	GalNAc-T13	polypeptide N-acetylgalactosaminyltransferase 13	protein-coding
18.8333	chr1	36313553	36313965	+	0.1	NA	intron (NM_001162530, intron 10 of 15)	AluJr|SINE|Alu	6652	NM_024676	79729	Hs.524496	NM_024676	ENSG00000214193	SH3D21	C1orf113	SH3 domain containing 21	protein-coding
23.9667-5	chr4	74425562	74425885	+	0.1	NA	Intergenic	Intergenic	-19413	NM_001657	374	Hs.270833	NM_001657	ENSG00000109321	AREG	AR|AREGB|CRDGF|SDGF	amphiregulin	protein-coding
38.7-6	chr2	190704720	190705237	+	0.1	NA	Intergenic	Intergenic	45820	NM_001321314	4664	Hs.107474	NM_005966	ENSG00000138386	NAB1	-	NGFI-A binding protein 1	protein-coding
20.5667-4	chr12	59859955	59860228	+	0.1	NA	Intergenic	Intergenic	170721	NR_073056	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
46.3	chr10	118302115	118302838	+	0.1	NA	3' UTR (NM_001134672, exon 8 of 8)	3' UTR (NM_001134672, exon 8 of 8)	39848	NM_022063	63877	Hs.105575	NM_022063	ENSG00000165669	FAM204A	C10orf84|bA319I23.1	family with sequence similarity 204 member A	protein-coding
11.4333-2	chr3	22352379	22352542	+	0.1	NA	Intergenic	Intergenic	395321	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
24-15	chr5	1771457	1771862	+	0.1	NA	Intergenic	Intergenic	28178	NM_032479	64979	Hs.719465	NM_032479	ENSG00000171421	MRPL36	BRIP1|L36mt|MRP-L36|PRPL36|RPMJ	mitochondrial ribosomal protein L36	protein-coding
22.1-6	chr21	15034357	15034616	+	0.1	NA	intron (NM_003489, intron 2 of 3)	intron (NM_003489, intron 2 of 3)	30514	NM_003489	8204	Hs.155017	NM_003489	ENSG00000180530	NRIP1	CAKUT3|RIP140	nuclear receptor interacting protein 1	protein-coding
28.9-4	chr12	113747962	113748351	+	0.1	NA	intron (NR_110025, intron 1 of 1)	MIRc|SINE|MIR	25527	NR_110025	100506465	Hs.211461	NR_110025	ENSG00000249550	LINC01234	LCAL84|onco-lncRNA-32	long intergenic non-protein coding RNA 1234	ncRNA
40.5-10	chr5	163644918	163645683	+	0.1	NA	Intergenic	LTR27|LTR|ERV1	139681	NM_013283	27430	Hs.54642	NM_013283	ENSG00000038274	MAT2B	MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR	methionine adenosyltransferase 2B	protein-coding
20.9333-2	chr1	164242498	164242877	+	0.1	NA	Intergenic	Intergenic	-316673	NM_001353131	5087	Hs.557097	NM_002585	ENSG00000185630	PBX1	CAKUHED	PBX homeobox 1	protein-coding
29.2667-8	chr3	28748179	28748704	+	0.1	NA	intron (NR_038840, intron 2 of 4)	intron (NR_038840, intron 2 of 4)	173163	NR_038840	645206	Hs.376725	NR_038840		LINC00693	-	long intergenic non-protein coding RNA 693	ncRNA
18.6-15	chr4	70615534	70615783	+	0.1	NA	Intergenic	L2a|LINE|L2	-13086	NM_031889	10117	Hs.667018	NM_031889	ENSG00000132464	ENAM	ADAI|AI1C|AIH2	enamelin	protein-coding
18.8667-2	chr11	34439019	34439264	+	0.1	NA	intron (NM_001752, intron 1 of 12)	CpG	207	NM_001752	847	Hs.502302	NM_001752	ENSG00000121691	CAT	-	catalase	protein-coding
20.8333-7	chr15	96603018	96603457	+	0.1	NA	Intergenic	L2c|LINE|L2	178417	NR_102754	100652749	Hs.303588	NR_102753	ENSG00000259282	SPATA8-AS1	-	SPATA8 antisense RNA 1 (head to head)	ncRNA
8.36667-5	chr5	8242955	8243088	+	0.1	NA	Intergenic	Intergenic	214543	NR_039984	729506	Hs.566412	NR_039984	ENSG00000245729	LINC02226	-	long intergenic non-protein coding RNA 2226	ncRNA
18.8-13	chr8	103316047	103316316	+	0.1	NA	intron (NM_001317796, intron 2 of 5)	HAL1|LINE|L1	7203	NR_145795	109623480		NR_145795		SNORD173	-	small nucleolar RNA, C/D box 173	snoRNA
20.1333-4	chr14	72084521	72084780	+	0.1	NA	intron (NM_001370288, intron 2 of 16)	intron (NM_001370288, intron 2 of 16)	151123	NM_001370293	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G protein signaling 6	protein-coding
14.4-19	chrX	117691181	117691342	+	0.1	NA	Intergenic	Intergenic	282477	NM_033495	90293	Hs.348262	NM_033495	ENSG00000003096	KLHL13	BKLHD2	kelch like family member 13	protein-coding
10.1333-5	chr4	30817447	30817687	+	0.1	NA	intron (NM_032457, intron 1 of 2)	intron (NM_032457, intron 1 of 2)	97198	NM_032456	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
17.8333-4	chr19	11020840	11021018	+	0.1	NA	intron (NM_001128845, intron 17 of 32)	AluSx3|SINE|Alu	36777	NM_001128846	6597	Hs.327527	NM_003072	ENSG00000127616	SMARCA4	BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	protein-coding
19.7333-11	chr9	36327190	36327458	+	0.1	NA	Intergenic	Intergenic	-50268	NM_001190388	10020	Hs.5920	NM_005476	ENSG00000159921	GNE	DMRV|GLCNE|IBM2|NM|Uae1	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	protein-coding
46.7-3	chr8	125083140	125083916	+	0.1	NA	intron (NM_001330609, intron 1 of 27)	intron (NM_001330609, intron 1 of 27)	8264	NM_014846	9897	Hs.270043	NM_014846	ENSG00000164961	WASHC5	KIAA0196|RTSC|RTSC1|SPG8	WASH complex subunit 5	protein-coding
24.1667	chr1	105798102	105798572	+	0.1	NA	Intergenic	Intergenic	-179402	NR_125955	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
20.0667-8	chr2	64534328	64534735	+	0.1	NA	intron (NM_001002243, intron 1 of 8)	intron (NM_001002243, intron 1 of 8)	9018	NR_039633	100616419		NR_039633	ENSG00000283204	MIR4434	-	microRNA 4434	ncRNA
9.4	chr10	44202107	44202258	+	0.1	NA	Intergenic	MSTD|LTR|ERVL-MaLR	-90568	NM_001258000	100130539	Hs.694626	NM_001258000	ENSG00000277288	C10orf142	-	chromosome 10 open reading frame 142	protein-coding
22.5667	chr1	183842512	183842786	+	0.1	NA	intron (NM_001297671, intron 2 of 17)	intron (NM_001297671, intron 2 of 17)	37529	NM_001297672	23179	Hs.497148	NM_015149	ENSG00000143344	RGL1	RGL	ral guanine nucleotide dissociation stimulator like 1	protein-coding
36.4-5	chr15	61678713	61679281	+	0.1	NA	Intergenic	L1MEf|LINE|L1	-50921	NR_146448	100506530	Hs.42265	NR_146448	ENSG00000259284	LINC02349	-	long intergenic non-protein coding RNA 2349	ncRNA
21.3667-16	chr9	132696871	132697257	+	0.1	NA	Intergenic	MER58C|DNA|hAT-Charlie	26600	NM_012204	9329	Hs.22302	NM_012204	ENSG00000125484	GTF3C4	KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA	general transcription factor IIIC subunit 4	protein-coding
22.8667	chr11	75706597	75706925	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-11077	NM_025098	80168	Hs.288568	NM_025098	ENSG00000166391	MOGAT2	DGAT2L5|DGAT2L5.|MGAT2|hDC5	monoacylglycerol O-acyltransferase 2	protein-coding
17.2667-10	chr16	77620053	77620248	+	0.1	NA	Intergenic	L1MEf|LINE|L1	-102342	NM_001243657	283927	Hs.282665	NM_001105663	ENSG00000140876	NUDT7	-	nudix hydrolase 7	protein-coding
23.3667-13	chr6	149362866	149363191	+	0.1	NA	intron (NM_001369506, intron 2 of 7)	intron (NM_001369506, intron 2 of 7)	-37234	NM_001002255	387082	Hs.657168	NM_001002255	ENSG00000177688	SUMO4	IDDM5|SMT3H4|SUMO-4|dJ281H8.4	small ubiquitin like modifier 4	protein-coding
14.2333-11	chr3	103490235	103490505	+	0.1	NA	Intergenic	Intergenic	33746	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
19.4-4	chr11	47627884	47628090	+	0.1	NA	intron (NM_014342, intron 9 of 12)	intron (NM_014342, intron 9 of 12)	14572	NM_014342	23788	Hs.269944	NM_014342	ENSG00000109919	MTCH2	HSPC032|MIMP|SLC25A50	mitochondrial carrier 2	protein-coding
24.9667-7	chr2	12815784	12816332	+	0.1	NA	Intergenic	Intergenic	78691	NR_036072	100422986		NR_036072	ENSG00000264370	MIR3125	mir-3125	microRNA 3125	ncRNA
7.63333-3	chr8	123802262	123802370	+	0.1	NA	intron (NM_144963, intron 18 of 23)	L2c|LINE|L2	33877	NM_001317918	157769	Hs.459174	NM_144963	ENSG00000176853	FAM91A1	-	family with sequence similarity 91 member A1	protein-coding
23.0667-8	chr17	12967986	12968433	+	0.1	NA	intron (NR_135569, intron 16 of 17)	intron (NR_135569, intron 16 of 17)	49818	NM_018127	60528	Hs.434232	NM_018127	ENSG00000006744	ELAC2	COXPD17|ELC2|HPC2	elaC ribonuclease Z 2	protein-coding
53.6-2	chr4	99522642	99523348	+	0.1	NA	intron (NM_032149, intron 3 of 8)	intron (NM_032149, intron 3 of 8)	11974	NM_032149	84103	Hs.97501	NM_032149	ENSG00000138813	C4orf17	-	chromosome 4 open reading frame 17	protein-coding
24.7667-5	chr2	16244628	16245014	+	0.1	NA	Intergenic	Intergenic	194394	NR_126559	104797537	Hs.435748	NR_126559	ENSG00000236289	GACAT3	LINC01458|lncRNA-AC130710	gastric cancer associated transcript 3	ncRNA
9.83333-2	chr9	96391432	96391620	+	0.1	NA	intron (NM_153695, intron 4 of 4)	intron (NM_153695, intron 4 of 4)	-7815	NM_007001	11046	Hs.494556	NM_007001	ENSG00000130958	SLC35D2	HFRC1|SQV7L|UGTrel8|hfrc	solute carrier family 35 member D2	protein-coding
24.0333-9	chr17	60037397	60037646	+	0.1	NA	Intergenic	L1MD2|LINE|L1	5584	NR_039890	100616210		NR_039890	ENSG00000264049	MIR4737	-	microRNA 4737	ncRNA
35.0667-2	chr12	1326522	1327007	+	0.1	NA	intron (NR_027948, intron 15 of 19)	intron (NR_027948, intron 15 of 19)	-173727	NR_028415	100292680	Hs.391695	NR_028415	ENSG00000249628	LINC00942	-	long intergenic non-protein coding RNA 942	ncRNA
23.6-21	chr8	112624522	112624827	+	0.1	NA	intron (NM_001363185, intron 20 of 66)	intron (NM_001363185, intron 20 of 66)	-18819	NR_031745	100302225		NR_031745	ENSG00000238399	MIR2053	hsa-mir-2053	microRNA 2053	ncRNA
22.2667-10	chr8	84721845	84722274	+	0.1	NA	intron (NM_001287244, intron 1 of 7)	intron (NM_001287244, intron 1 of 7)	16132	NM_001287244	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
16.2	chr1	248886048	248886425	+	0.1	NA	Intergenic	Intergenic	-19999	NM_170725	267002	Hs.602037	NM_170725	ENSG00000185220	PGBD2	-	piggyBac transposable element derived 2	protein-coding
22.4333-13	chr3	122105979	122106361	+	0.1	NA	intron (NM_001206925, intron 2 of 5)	intron (NM_001206925, intron 2 of 5)	28321	NM_176892	942	Hs.171182	NM_006889	ENSG00000114013	CD86	B7-2|B7.2|B70|CD28LG2|LAB72	CD86 molecule	protein-coding
31.2-10	chr17	58235227	58235776	+	0.1	NA	Intergenic	Intergenic	-2925	NM_001160102	4025	Hs.234742	NM_006151	ENSG00000167419	LPO	SPO	lactoperoxidase	protein-coding
17.0333	chr1	88367622	88367910	+	0.1	NA	Intergenic	Intergenic	-316378	NM_001320707	5586	Hs.440833	NM_006256	ENSG00000065243	PKN2	PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7	protein kinase N2	protein-coding
19.9667-12	chr5	123781212	123781605	+	0.1	NA	Intergenic	MER5B|DNA|hAT-Charlie	235991	NM_001044723	1456	Hs.129206	NM_004384	ENSG00000151292	CSNK1G3	CKI-gamma 3|CSNK1G3L	casein kinase 1 gamma 3	protein-coding
25-6	chr2	56518726	56519152	+	0.1	NA	Intergenic	Intergenic	-333169	NR_125368	100129434	Hs.580330	NR_125368		LOC100129434	-	uncharacterized LOC100129434	ncRNA
35.4-3	chr10	39123159	39123663	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	426815	NR_045000	399746	Hs.742607	NR_045000		ACTR3BP5	FKSG74	ACTR3B pseudogene 5	pseudo
23.7333-10	chr8	125279960	125280520	+	0.1	NA	intron (NM_001349486, intron 5 of 7)	intron (NM_001349486, intron 5 of 7)	-150118	NM_025195	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding
35.6-8	chr22	35285170	35285725	+	0.1	NA	intron (NM_001003681, intron 6 of 10)	AluSx|SINE|Alu	-13828	NM_001135729	10043	Hs.474705	NM_005488	ENSG00000100284	TOM1	-	target of myb1 membrane trafficking protein	protein-coding
13.6667-2	chr12	41128913	41129100	+	0.1	NA	Intergenic	L2c|LINE|L2	-59314	NM_001164595	29951	Hs.380044	NM_013377	ENSG00000165966	PDZRN4	LNX4|SAMCAP3L	PDZ domain containing ring finger 4	protein-coding
29.3333-8	chr4	30434734	30435263	+	0.1	NA	Intergenic	Intergenic	-285371	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
30.1-4	chr17	64685233	64685659	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-23139	NM_022739	64750	Hs.515011	NM_022739	ENSG00000108854	SMURF2	-	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
16.0667-7	chr17	31929474	31929635	+	0.1	NA	Intergenic	AluY|SINE|Alu	-7453	NM_001321207	23512	Hs.462732	NM_015355	ENSG00000178691	SUZ12	CHET9|JJAZ1	SUZ12 polycomb repressive complex 2 subunit	protein-coding
14-6	chr15	90971073	90971257	+	0.1	NA	intron (NM_199413, intron 11 of 13)	L1ME1|LINE|L1	4796	NR_051984	100507118	Hs.366401	NR_051984	ENSG00000258725	PRC1-AS1	-	PRC1 antisense RNA 1	ncRNA
27.6333	chr1	237658668	237659254	+	0.1	NA	intron (NM_001035, intron 54 of 104)	intron (NM_001035, intron 54 of 104)	187842	NR_039626	100616141		NR_039626	ENSG00000266262	MIR4428	-	microRNA 4428	ncRNA
28.6	chr1	185187255	185187901	+	0.1	NA	intron (NM_017673, intron 9 of 18)	L2a|LINE|L2	30411	NM_017673	54823	Hs.134183	NM_017673	ENSG00000116668	SWT1	C1orf26|HsSwt1	SWT1 RNA endoribonuclease homolog	protein-coding
8.93333-4	chr5	93359169	93359337	+	0.1	NA	Intergenic	Intergenic	212090	NR_109825	441094	Hs.457407	NR_015369	ENSG00000237187	NR2F1-AS1	-	NR2F1 antisense RNA 1	ncRNA
12.5667-8	chr3	127299865	127299990	+	0.1	NA	Intergenic	L1ME5|LINE|L1	-11881	NM_001362810	100419008		NM_001362810		PRR20G	-	proline rich 20G	protein-coding
14.7333	chr1	42472437	42472812	+	0.1	NA	intron (NM_001355227, intron 1 of 18)	intron (NM_001355227, intron 1 of 18)	9338	NM_001355224	728621	Hs.729640	NM_001080850	ENSG00000186409	CCDC30	PFD6L|PFDN6L	coiled-coil domain containing 30	protein-coding
20.9667-7	chr20	47461515	47461912	+	0.1	NA	Intergenic	MSTC|LTR|ERVL-MaLR	-40174	NM_001174088	8202	Hs.592142	NM_006534	ENSG00000124151	NCOA3	ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP	nuclear receptor coactivator 3	protein-coding
16.7667-12	chr8	88178022	88178458	+	0.1	NA	intron (NM_005941, intron 3 of 9)	L1MC2|LINE|L1	149243	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
9.53333-2	chr12	47095299	47095444	+	0.1	NA	intron (NM_138371, intron 1 of 3)	L1ME3A|LINE|L1	-15412	NM_001370299	347902	Hs.121520	NM_181847	ENSG00000139211	AMIGO2	ALI1|AMIGO-2|DEGA	adhesion molecule with Ig like domain 2	protein-coding
33.5667-3	chr15	68878725	68879339	+	0.1	NA	Intergenic	L1ME3G|LINE|L1	-51468	NR_033672	79400	Hs.657932	NM_024505	ENSG00000255346	NOX5	-	NADPH oxidase 5	protein-coding
12.0667-6	chr17	82001758	82001924	+	0.1	NA	intron (NR_045351, intron 6 of 14)	intron (NR_045351, intron 6 of 14)	21037	NM_001271007	201254	Hs.37616	NM_144998	ENSG00000169689	CENPX	CENP-X|D9|FAAP10|MHF2|STRA13	centromere protein X	protein-coding
42.1	chr1	100713779	100714687	+	0.1	NA	Intergenic	Intergenic	-5407	NM_001199834	7412	Hs.109225	NM_001078	ENSG00000162692	VCAM1	CD106|INCAM-100	vascular cell adhesion molecule 1	protein-coding
13.1667-12	chr6	141837519	141837734	+	0.1	NA	Intergenic	HAL1ME|LINE|L1	251173	NM_002511	4829	Hs.552106	NM_002511	ENSG00000135577	NMBR	BB1|BB1R|NMB-R	neuromedin B receptor	protein-coding
18.2667-12	chr3	57074510	57074711	+	0.1	NA	3' UTR (NM_181727, exon 2 of 2)	3' UTR (NM_181727, exon 2 of 2)	4658	NM_001128615	50650	Hs.476402	NM_019555	ENSG00000163947	ARHGEF3	GEF3|STA3|XPLN	Rho guanine nucleotide exchange factor 3	protein-coding
37.4333	chr12	14588865	14589592	+	0.1	NA	intron (NR_120465, intron 2 of 5)	MER52C|LTR|ERV1	-21345	NM_024829	79887	Hs.131933	NM_024829	ENSG00000121316	PLBD1	-	phospholipase B domain containing 1	protein-coding
20.7-2	chr4	30498529	30499021	+	0.1	NA	Intergenic	Intergenic	-221594	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
30.9667-2	chr3	32357659	32358091	+	0.1	NA	intron (NM_178868, intron 2 of 3)	intron (NM_178868, intron 2 of 3)	-33978	NM_181472	112616	Hs.440494	NM_138410	ENSG00000153551	CMTM7	CKLFSF7	CKLF like MARVEL transmembrane domain containing 7	protein-coding
19.1333-2	chr12	127804445	127804778	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-77006	NR_033987	400087	Hs.524846	NR_033987	ENSG00000256597	LINC02393	-	long intergenic non-protein coding RNA 2393	ncRNA
16.4-9	chr6	109400680	109401024	+	0.1	NA	intron (NM_001286360, intron 5 of 6)	intron (NM_001286360, intron 5 of 6)	-18040	NM_001142404	8763	Hs.520313	NM_006016	ENSG00000135535	CD164	DFNA66|MGC-24|MGC-24v|MUC-24|endolyn	CD164 molecule	protein-coding
37.7-6	chr7	49023654	49024213	+	0.1	NA	Intergenic	Intergenic	99386	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
23.0667-7	chr15	52139998	52140503	+	0.1	NA	intron (NM_006578, intron 5 of 10)	intron (NM_006578, intron 5 of 10)	-27475	NM_020396	10017	Hs.283672	NM_020396	ENSG00000137875	BCL2L10	BCL-B|Boo|Diva|bcl2-L-10	BCL2 like 10	protein-coding
27.6667-5	chr12	125274262	125274812	+	0.1	NA	intron (NM_001366854, intron 1 of 8)	intron (NM_001366854, intron 1 of 8)	-52079	NM_052907	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding
12.4-2	chr11	111788287	111788438	+	0.1	NA	intron (NM_001077690, intron 14 of 14)	intron (NM_001077690, intron 14 of 14)	-21973	NM_002716	5519	Hs.269128	NM_002716	ENSG00000137713	PPP2R1B	PP2A-Abeta|PR65B	protein phosphatase 2 scaffold subunit Abeta	protein-coding
28.9333-3	chr13	90510434	90510889	+	0.1	NA	intron (NR_120414, intron 2 of 5)	L1M4|LINE|L1	17373	NR_120414	101927224	Hs.385801	NR_120414		LINC01049	-	long intergenic non-protein coding RNA 1049	ncRNA
22.4333-8	chr15	97210238	97210524	+	0.1	NA	Intergenic	Intergenic	311430	NR_120324	101927286	Hs.611279	NR_120324	ENSG00000259664	LINC02254	-	long intergenic non-protein coding RNA 2254	ncRNA
40-2	chr1	97128174	97128727	+	0.1	NA	intron (NM_000110, intron 20 of 22)	intron (NM_000110, intron 20 of 22)	32527	NR_046590	100873932	Hs.682651	NR_046590	ENSG00000232878	DPYD-AS1	-	DPYD antisense RNA 1	ncRNA
35.4333-3	chr10	15560674	15561212	+	0.1	NA	intron (NM_001291494, intron 24 of 28)	AluJo|SINE|Alu	158979	NM_003638	8516	Hs.171311	NM_003638	ENSG00000077943	ITGA8	-	integrin subunit alpha 8	protein-coding
14.1333-8	chr14	73853159	73853362	+	0.1	NA	intron (NM_001371328, intron 1 of 8)	MIR|SINE|MIR	1313	NM_001371325								
10.4-2	chr11	84322709	84322813	+	0.1	NA	intron (NM_001142699, intron 7 of 27)	AluSz|SINE|Alu	-5422	NM_001206769	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
22-6	chr2	18885232	18885587	+	0.1	NA	Intergenic	L1ME5|LINE|L1	141562	NR_135287	400945	Hs.502854	NR_135287	ENSG00000236204	LINC01376	-	long intergenic non-protein coding RNA 1376	ncRNA
16.5667-6	chr21	44754459	44754732	+	0.1	NA	Intergenic	L1MEg|LINE|L1	-43023	NM_001272037	54084	Hs.660703	NM_144991	ENSG00000175894	TSPEAR	C21orf29|DFNB98|ECTD14|TSP-EAR	thrombospondin type laminin G domain and EAR repeats	protein-coding
24.1667-8	chr9	105316030	105316327	+	0.1	NA	intron (NM_001330731, intron 3 of 15)	L2a|LINE|L2	71527	NM_001286730	23446	Hs.573495	NM_022109	ENSG00000070214	SLC44A1	CD92|CDW92|CHTL1|CTL1	solute carrier family 44 member 1	protein-coding
25.3667-9	chrX	128954878	128955231	+	0.1	NA	Intergenic	THE1B|LTR|ERVL-MaLR	568436	NM_003069	6594	Hs.152292	NM_003069	ENSG00000102038	SMARCA1	ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	protein-coding
44-11	chr9	98586008	98586520	+	0.1	NA	intron (NM_005458, intron 1 of 18)	L1ME3E|LINE|L1	122671	NM_005458	9568	Hs.198612	NM_005458	ENSG00000136928	GABBR2	EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS	gamma-aminobutyric acid type B receptor subunit 2	protein-coding
20.6333-3	chr1	119282781	119283167	+	0.1	NA	Intergenic	BLACKJACK|DNA|hAT-Blackjack	-45278	NR_146623	105378934		NR_146623	ENSG00000232650	LINC01780	-	long intergenic non-protein coding RNA 1780	ncRNA
21.5333-5	chr2	97805714	97806004	+	0.1	NA	intron (NM_015348, intron 19 of 40)	intron (NM_015348, intron 19 of 40)	71453	NM_207519	7535	Hs.234569	NM_001079	ENSG00000115085	ZAP70	ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70	zeta chain of T cell receptor associated protein kinase 70	protein-coding
15.8667-10	chr9	74361673	74361944	+	0.1	NA	Intergenic	Intergenic	-9723	NR_121182	101927358	Hs.559523	NR_121182	ENSG00000227809	LOC101927358	-	uncharacterized LOC101927358	ncRNA
15.1667-5	chr17	63153464	63153648	+	0.1	NA	intron (NM_025185, intron 4 of 25)	MER5A|DNA|hAT-Charlie	187321	NM_025185	26115	Hs.410889	NM_015623	ENSG00000170921	TANC2	ROLSA|rols	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	protein-coding
22.6-3	chr11	60382563	60382847	+	0.1	NA	intron (NM_021201, intron 1 of 6)	intron (NM_021201, intron 1 of 6)	4173	NM_021201	58475	Hs.530735	NM_021201	ENSG00000166927	MS4A7	4SPAN2|CD20L4|CFFM4|MS4A8	membrane spanning 4-domains A7	protein-coding
19.3-12	chr5	95937312	95937547	+	0.1	NA	intron (NM_012081, intron 2 of 11)	intron (NM_012081, intron 2 of 11)	24422	NM_012081	22936	Hs.192221	NM_012081	ENSG00000118985	ELL2	MRCCAT1	elongation factor for RNA polymerase II 2	protein-coding
19.9333-17	chr7	13927035	13927277	+	0.1	NA	intron (NM_001370555, intron 8 of 12)	intron (NM_001370555, intron 8 of 12)	59358	NM_001163150	2115	Hs.22634	NM_004956	ENSG00000006468	ETV1	ER81	ETS variant 1	protein-coding
26.2-12	chr2	148565176	148565695	+	0.1	NA	Intergenic	MER20|DNA|hAT-Charlie	-79316	NM_015630	26122	Hs.23270	NM_015630	ENSG00000135999	EPC2	EPC-LIKE	enhancer of polycomb homolog 2	protein-coding
17.5333-6	chr17	82408420	82408687	+	0.1	NA	intron (NR_033265, intron 4 of 9)	MLT1C|LTR|ERVL-MaLR	-9794	NM_001330542	284004	Hs.744207	NM_173620	ENSG00000169660	HEXD	HEXDC	hexosaminidase D	protein-coding
23	chr1	147715065	147715560	+	0.1	NA	Intergenic	MLT1F|LTR|ERVL-MaLR	-44788	NR_136633	51205	Hs.562154	NM_016361	ENSG00000162836	ACP6	ACPL1|LPAP|PACPL1	acid phosphatase 6, lysophosphatidic	protein-coding
24.3-8	chr21	29686343	29686645	+	0.1	NA	intron (NM_001320621, intron 1 of 13)	intron (NM_001320621, intron 1 of 13)	-61681	NR_027021	642976	Hs.473554	NR_027021		GRIK1-AS1	C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110	GRIK1 antisense RNA 1	ncRNA
34.1-5	chr6	120844205	120844737	+	0.1	NA	Intergenic	Intergenic	490009	NM_152730	221322	Hs.121396	NM_152730	ENSG00000146350	TBC1D32	BROMI|C6orf170|C6orf171	TBC1 domain family member 32	protein-coding
13.4-4	chr17	32779193	32779370	+	0.1	NA	intron (NM_015194, intron 2 of 21)	L1ME4b|LINE|L1	97843	NM_015194	4642	Hs.602063	NM_015194	ENSG00000176658	MYO1D	PPP1R108|myr4	myosin ID	protein-coding
26.7333-5	chr20	33679446	33679820	+	0.1	NA	intron (NM_005225, intron 3 of 6)	MIR1_Amn|SINE|MIR	-5205	NM_031232	63941	Hs.516986	NM_031231	ENSG00000125967	NECAB3	APBA2BP|EFCBP3|NIP1|STIP3|SYTIP2|XB51|dJ63M2.4|dJ63M2.5	N-terminal EF-hand calcium binding protein 3	protein-coding
13.2667-5	chr2	105941917	105942207	+	0.1	NA	Intergenic	Intergenic	90215	NM_001004720	8440	Hs.529244	NM_003581	ENSG00000071051	NCK2	GRB4|NCKbeta	NCK adaptor protein 2	protein-coding
10.6667	chr1	9610418	9610646	+	0.1	NA	exon (NM_001130924, exon 9 of 11)	exon (NM_001130924, exon 9 of 11)	21621	NM_001010866	199953	Hs.632365	NM_001010866	ENSG00000188807	TMEM201	Ima1|NET5|SAMP1	transmembrane protein 201	protein-coding
20.1-9	chr6	87170608	87171068	+	0.1	NA	intron (NM_015021, intron 1 of 7)	MIRb|SINE|MIR	15273	NM_001351444	23036	Hs.444800	NM_015021	ENSG00000188994	ZNF292	Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3	zinc finger protein 292	protein-coding
33.2-7	chr14	46092572	46093250	+	0.1	NA	intron (NR_102702, intron 1 of 3)	intron (NR_102702, intron 1 of 3)	28752	NR_102701	100506412	Hs.207545	NR_102699	ENSG00000258700	LINC00871	-	long intergenic non-protein coding RNA 871	ncRNA
13.5-13	chr9	104921745	104921972	+	0.1	NA	intron (NM_005502, intron 1 of 49)	L2c|LINE|L2	6297	NM_005502	19	Hs.659274	NM_005502	ENSG00000165029	ABCA1	ABC-1|ABC1|CERP|HDLDT1|TGD	ATP binding cassette subfamily A member 1	protein-coding
13.9667-4	chr18	59608025	59608375	+	0.1	NA	intron (NM_133459, intron 2 of 10)	MIR|SINE|MIR	89223	NM_133459	147372	Hs.34333	NM_133459	ENSG00000183287	CCBE1	HKLLS1	collagen and calcium binding EGF domains 1	protein-coding
18.8667-11	chr7	86732442	86732880	+	0.1	NA	intron (NM_001363522, intron 1 of 4)	MIR|SINE|MIR	88747	NM_000840	2913	Hs.590575	NM_000840	ENSG00000198822	GRM3	GLUR3|GPRC1C|MGLUR3|mGlu3	glutamate metabotropic receptor 3	protein-coding
28.8-11	chr6	34009599	34010116	+	0.1	NA	Intergenic	Intergenic	-9806	NR_031681	100302123		NR_031681	ENSG00000221697	MIR1275	MIRN1275|hsa-mir-1275|mir-1275	microRNA 1275	ncRNA
20.9667-13	chr4	149668758	149668967	+	0.1	NA	intron (NM_001363507, intron 7 of 13)	L1M5|LINE|L1	146981	NM_001363509	285423	Hs.591689	NM_001363507	ENSG00000234828	IQCM	-	IQ motif containing M	protein-coding
39.7333-3	chr7	24096200	24096908	+	0.1	NA	Intergenic	L1PA13|LINE|L1	-187636	NM_000905	4852	Hs.1832	NM_000905	ENSG00000122585	NPY	PYY4	neuropeptide Y	protein-coding
23.8-13	chr6	65067102	65067429	+	0.1	NA	intron (NM_001292009, intron 12 of 43)	intron (NM_001292009, intron 12 of 43)	-234153	NM_001271675	441155	Hs.546686	NM_001271675		LOC441155	-	zinc finger CCCH-type domain-containing-like	protein-coding
44.2667-3	chr5	53416436	53417205	+	0.1	NA	Intergenic	L1ME4a|LINE|L1	-63809	NM_006350	10468	Hs.9914	NM_006350	ENSG00000134363	FST	FS	follistatin	protein-coding
43.0667-2	chr10	128327170	128327631	+	0.1	NA	Intergenic	Intergenic	41450	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA
25.8-4	chr12	9589624	9590021	+	0.1	NA	Intergenic	AluSx|SINE|Alu	18094	NM_002258	3820	Hs.169824	NM_002258	ENSG00000111796	KLRB1	CD161|CLEC5B|NKR|NKR-P1|NKR-P1A|NKRP1A|hNKR-P1A	killer cell lectin like receptor B1	protein-coding
29.6667-3	chr11	44213747	44214447	+	0.1	NA	intron (NM_207122, intron 10 of 13)	intron (NM_207122, intron 10 of 13)	96042	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding
18.6333-2	chr1	43194958	43195205	+	0.1	NA	intron (NM_001195831, intron 6 of 23)	L1ME5|LINE|L1	-22511	NM_001159936	10969	Hs.346868	NM_006824	ENSG00000117395	EBNA1BP2	EBP2|NOBP|P40	EBNA1 binding protein 2	protein-coding
38.9-2	chr7	48694206	48694871	+	0.1	NA	Intergenic	Intergenic	-230009	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
19.1-5	chr10	86380007	86380407	+	0.1	NA	Intergenic	L1MB3|LINE|L1	-13412	NM_017551	2894	Hs.530653	NM_017551	ENSG00000182771	GRID1	GluD1	glutamate ionotropic receptor delta type subunit 1	protein-coding
20.7333-6	chr11	78314434	78314759	+	0.1	NA	intron (NM_080491, intron 1 of 9)	intron (NM_080491, intron 1 of 9)	27284	NM_012296	9846	Hs.429434	NM_012296	ENSG00000033327	GAB2	-	GRB2 associated binding protein 2	protein-coding
18.5333-15	chr2	99999145	99999489	+	0.1	NA	intron (NM_001025108, intron 6 of 23)	intron (NM_001025108, intron 6 of 23)	106266	NM_001025108	3899	Hs.444414	NM_002285	ENSG00000144218	AFF3	LAF4|MLLT2-like	AF4/FMR2 family member 3	protein-coding
19.5333-3	chr14	45011782	45011977	+	0.1	NA	intron (NM_001308120, intron 6 of 19)	intron (NM_001308120, intron 6 of 19)	49689	NM_015091	23116	Hs.371078	NM_015091	ENSG00000198718	TOGARAM1	FAM179B|KIAA0423	TOG array regulator of axonemal microtubules 1	protein-coding
26.9-6	chr14	47831434	47831944	+	0.1	NA	Intergenic	AluY|SINE|Alu	-36675	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
13.4-8	chr8	54072715	54072912	+	0.1	NA	intron (NM_001279356, intron 2 of 7)	AluSz|SINE|Alu	28741	NM_001279360	10434	Hs.744046	NM_006330	ENSG00000120992	LYPLA1	APT-1|APT1|LPL-I|LPL1|hAPT1	lysophospholipase 1	protein-coding
21.2-19	chr5	55904193	55904653	+	0.1	NA	intron (NM_001297572, intron 8 of 10)	intron (NM_001297572, intron 8 of 10)	51101	NM_001242636	133396	Hs.55378	NM_139017	ENSG00000164509	IL31RA	CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R	interleukin 31 receptor A	protein-coding
17.0667-11	chr21	30993219	30993577	+	0.1	NA	Intergenic	Intergenic	45078	NM_001099219	728299	Hs.580875	NM_001099219	ENSG00000206102	KRTAP19-8	-	keratin associated protein 19-8	protein-coding
22-7	chr2	113857106	113857362	+	0.1	NA	intron (NR_110174, intron 2 of 4)	MLT1B|LTR|ERVL-MaLR	-32700	NR_102318	10096	Hs.433512	NM_005721	ENSG00000115091	ACTR3	ARP3	actin related protein 3	protein-coding
39.0667-3	chr6	99383190	99383787	+	0.1	NA	intron (NM_017421, intron 2 of 6)	intron (NM_017421, intron 2 of 6)	10707	NM_017421	51805	Hs.713623	NM_017421	ENSG00000132423	COQ3	DHHBMT|DHHBMTASE|UG0215E05|bA9819.1	coenzyme Q3, methyltransferase	protein-coding
10.0333	chr17	69400542	69400642	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-14105	NM_002758	5608	Hs.49329	NM_002758	ENSG00000108984	MAP2K6	MAPKK6|MEK6|MKK6|PRKMK6|SAPKK-3|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
50.4333-2	chr5	84027601	84028145	+	0.1	NA	intron (NM_001278642, intron 8 of 9)	intron (NM_001278642, intron 8 of 9)	-307018	NM_001884	1404	Hs.2799	NM_001884	ENSG00000145681	HAPLN1	CRT1|CRTL1	hyaluronan and proteoglycan link protein 1	protein-coding
21.0667-4	chr14	68190374	68190855	+	0.1	NA	intron (NM_133509, intron 7 of 10)	intron (NM_133509, intron 7 of 10)	367022	NM_001321815	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
10.4-12	chr8	75406915	75407040	+	0.1	NA	promoter-TSS (NM_001330561)	promoter-TSS (NM_001330561)	-672	NM_001330561	3174	Hs.241529	NM_004133	ENSG00000164749	HNF4G	NR2A2|NR2A3	hepatocyte nuclear factor 4 gamma	protein-coding
27.1333-5	chr11	78630765	78631081	+	0.1	NA	Intergenic	L1M1|LINE|L1	-56059	NM_024678	79731	Hs.503389	NM_024678	ENSG00000137513	NARS2	DFNB94|SLM5|asnRS	asparaginyl-tRNA synthetase 2, mitochondrial	protein-coding
27.9-5	chr5	27199181	27199675	+	0.1	NA	Intergenic	Intergenic	-160842	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
12.6-4	chr10	41902596	41902859	+	0.1	NA	Intergenic	(AATGG)n|Simple_repeat|Simple_repeat	465318	NR_024380	441666	Hs.255729	NR_024380	ENSG00000215146	LOC441666	-	zinc finger protein 91 pseudogene	pseudo
19.8-12	chr22	30433500	30433845	+	0.1	NA	non-coding (NR_148046, exon 2 of 4)	non-coding (NR_148046, exon 2 of 4)	986	NR_148046	105372990	Hs.565803	NR_148046		LOC105372990	-	uncharacterized LOC105372990	ncRNA
29.2-4	chr2	125908476	125908956	+	0.1	NA	Intergenic	Intergenic	209269	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
16.1-6	chr19	57336296	57336457	+	0.1	NA	Intergenic	L1MDa|LINE|L1	-14898	NM_020657	57343	Hs.287374	NM_020657	ENSG00000131845	ZNF304	-	zinc finger protein 304	protein-coding
21.7-8	chr3	108044676	108045059	+	0.1	NA	3' UTR (NM_001777, exon 11 of 11)	3' UTR (NM_001777, exon 11 of 11)	46221	NM_001777	961	Hs.446414	NM_001777	ENSG00000196776	CD47	IAP|MER6|OA3	CD47 molecule	protein-coding
22.9333-4	chr10	74524056	74524409	+	0.1	NA	intron (NR_120673, intron 2 of 4)	intron (NR_120673, intron 2 of 4)	5092	NR_120673	102723439		NR_120673		LOC102723439	-	uncharacterized LOC102723439	ncRNA
25.2667-4	chr15	61771711	61772152	+	0.1	NA	Intergenic	AluSq|SINE|Alu	42013	NR_146448	100506530	Hs.42265	NR_146448	ENSG00000259284	LINC02349	-	long intergenic non-protein coding RNA 2349	ncRNA
31.3-8	chr4	25192295	25192609	+	0.1	NA	intron (NR_037934, intron 1 of 1)	AluJb|SINE|Alu	31780	NR_037934	285540	Hs.732278	NR_037934		SEPSECS-AS1	-	SEPSECS antisense RNA 1 (head to head)	ncRNA
17-7	chr4	21052250	21052459	+	0.1	NA	intron (NM_147182, intron 2 of 8)	intron (NM_147182, intron 2 of 8)	-68345	NM_001363504	80333	Hs.655705	NM_025221	ENSG00000185774	KCNIP4	CALP|KCHIP4	potassium voltage-gated channel interacting protein 4	protein-coding
15.7333-11	chr5	64070803	64070999	+	0.1	NA	Intergenic	Intergenic	-94942	NM_178532	285671	Hs.657843	NM_178532	ENSG00000164197	RNF180	RINES	ring finger protein 180	protein-coding
12.9-11	chr9	122787693	122787942	+	0.1	NA	Intergenic	Intergenic	-1116	NM_001001923	392391	Hs.534761	NM_001001923	ENSG00000148215	OR5C1	OR5C2P|OR9-31|OR9-F	olfactory receptor family 5 subfamily C member 1	protein-coding
27.5333-10	chr5	25255233	25255711	+	0.1	NA	intron (NR_136209, intron 1 of 3)	intron (NR_136209, intron 1 of 3)	64519	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
18.8333-18	chr6	155631512	155631734	+	0.1	NA	Intergenic	Intergenic	116779	NR_134596	105378068	Hs.131541	NR_134596		LOC105378068	-	uncharacterized LOC105378068	ncRNA
39.6333-3	chr3	33408013	33408598	+	0.1	NA	intron (NM_001128160, intron 7 of 14)	intron (NM_001128160, intron 7 of 14)	32073	NM_001128160	7342	Hs.729120	NM_014517	ENSG00000153560	UBP1	LBP-1B|LBP-1a|LBP1A|LBP1B	upstream binding protein 1	protein-coding
24.3-10	chr3	117523189	117523653	+	0.1	NA	Intergenic	Intergenic	167504	NR_146652	105374057	Hs.518179	NR_146652	ENSG00000241213	LINC02024	-	long intergenic non-protein coding RNA 2024	ncRNA
42.4333-7	chr8	43665972	43666701	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	373894	NM_001005365	340441	Hs.531579	NM_001002920	ENSG00000188877	POTEA	A26A1|CT104.3|POTE-8|POTE8	POTE ankyrin domain family member A	protein-coding
23.9667	chr1	24845155	24845394	+	0.1	NA	TTS (NM_013943)	TTS (NM_013943)	74142	NR_106789	102465437		NR_106789	ENSG00000278034	MIR6731	hsa-mir-6731	microRNA 6731	ncRNA
38.1-3	chr18	42788311	42789043	+	0.1	NA	intron (NM_002930, intron 4 of 4)	Charlie1a|DNA|hAT-Charlie	327008	NM_002930	6014	Hs.464985	NM_002930	ENSG00000152214	RIT2	RIBA|RIN|ROC2	Ras like without CAAX 2	protein-coding
33.8333-7	chr20	47877568	47878097	+	0.1	NA	Intergenic	Intergenic	-91216	NM_198596	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding
19.7667-4	chr20	12381653	12382159	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	464013	NM_014962	22903	Hs.709366	NM_014962	ENSG00000132640	BTBD3	dJ742J24.1	BTB domain containing 3	protein-coding
12.6-3	chr1	232779141	232779404	+	0.1	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	-25620	NM_019090	54627	Hs.160373	NM_019090	ENSG00000212916	MAP10	KIAA1383|MTR120	microtubule associated protein 10	protein-coding
25.7-8	chr14	67090581	67090915	+	0.1	NA	intron (NM_001024218, intron 11 of 21)	MIR|SINE|MIR	-98692	NM_173526	161142	Hs.412818	NM_173526	ENSG00000172717	FAM71D	C14orf54	family with sequence similarity 71 member D	protein-coding
16.8333-2	chr10	128501605	128501975	+	0.1	NA	Intergenic	Intergenic	215840	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA
14.4-17	chr8	82575067	82575318	+	0.1	NA	Intergenic	MLT1A|LTR|ERVL-MaLR	-336912	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
27.3333-12	chr9	103553854	103554227	+	0.1	NA	Intergenic	L1PA13|LINE|L1	-229007	NR_121578	101928496	Hs.410860	NR_121578	ENSG00000225564	LINC01492	-	long intergenic non-protein coding RNA 1492	ncRNA
24.7667-6	chr3	63171090	63171492	+	0.1	NA	Intergenic	Intergenic	68603	NR_027104	285401	Hs.211125	NR_027104	ENSG00000244342	LINC00698	-	long intergenic non-protein coding RNA 698	ncRNA
21.0333	chr10	120851150	120851570	+	0.1	NA	promoter-TSS (NR_033850)	promoter-TSS (NR_033850)	-2	NM_018117	55717	Hs.144447	NM_018117	ENSG00000120008	WDR11	BRWD2|DR11|HH14|SRI1|WDR15	WD repeat domain 11	protein-coding
36.9333-6	chr2	74182352	74182937	+	0.1	NA	Intergenic	AluSz|SINE|Alu	-3765	NM_018221	55233	Hs.602092	NM_018221	ENSG00000114978	MOB1A	C2orf6|MATS1|MOB1|MOBK1B|MOBKL1B|Mob4B	MOB kinase activator 1A	protein-coding
27-20	chr4	67910483	67911037	+	0.1	NA	3' UTR (NM_182606, exon 10 of 10)	3' UTR (NM_182606, exon 10 of 10)	-26758	NM_004262	9407	Hs.132195	NM_004262	ENSG00000153802	TMPRSS11D	HAT	transmembrane serine protease 11D	protein-coding
15.4-19	chr5	162924905	162925185	+	0.1	NA	Intergenic	MLT1E2|LTR|ERVL-MaLR	-512526	NM_001364019	900	Hs.79101	NM_004060	ENSG00000113328	CCNG1	CCNG	cyclin G1	protein-coding
36.9667-5	chr6	67190649	67191087	+	0.1	NA	Intergenic	Intergenic	-864483	NR_125869	102723883	Hs.566528	NR_125869	ENSG00000223504	LOC102723883	-	uncharacterized LOC102723883	ncRNA
27.8333-11	chr8	119576060	119576559	+	0.1	NA	intron (NM_001330600, intron 19 of 25)	AluSq2|SINE|Alu	16699	NR_045555	5168	Hs.190977	NM_006209	ENSG00000136960	ENPP2	ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2	ectonucleotide pyrophosphatase/phosphodiesterase 2	protein-coding
24.4667-2	chr12	38387968	38388402	+	0.1	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	71411	NM_001308340	144245	Hs.259305	NM_001013620	ENSG00000175548	ALG10B	ALG10|KCR1	ALG10 alpha-1,2-glucosyltransferase B	protein-coding
41.6667-5	chr4	84548224	84548753	+	0.1	NA	Intergenic	Intergenic	-34639	NM_001263	1040	Hs.654899	NM_001263	ENSG00000163624	CDS1	CDS 1	CDP-diacylglycerol synthase 1	protein-coding
16.4-8	chr21	29884669	29884930	+	0.1	NA	intron (NM_000830, intron 1 of 16)	intron (NM_000830, intron 1 of 16)	55197	NM_001320616	2897	Hs.664641	NM_000830	ENSG00000171189	GRIK1	EAA3|EEA3|GLR5|GLUR5|GluK1|gluR-5	glutamate ionotropic receptor kainate type subunit 1	protein-coding
15.4667-15	chr5	13494133	13494378	+	0.1	NA	Intergenic	L1PA15|LINE|L1	450225	NM_001369	1767	Hs.212360	NM_001369	ENSG00000039139	DNAH5	CILD3|DNAHC5|HL1|KTGNR|PCD	dynein axonemal heavy chain 5	protein-coding
4.23333	chr15	99588877	99588919	+	0.1	NA	intron (NM_001352616, intron 1 of 10)	L1ME2|LINE|L1	22415	NM_001352616	4205	Hs.268675	NM_005587	ENSG00000068305	MEF2A	ADCAD1|RSRFC4|RSRFC9|mef2	myocyte enhancer factor 2A	protein-coding
13.5667-4	chr2	97811255	97811510	+	0.1	NA	intron (NM_015348, intron 17 of 40)	intron (NM_015348, intron 17 of 40)	76976	NM_207519	7535	Hs.234569	NM_001079	ENSG00000115085	ZAP70	ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70	zeta chain of T cell receptor associated protein kinase 70	protein-coding
29.4667-6	chr20	58014163	58014633	+	0.1	NA	Intergenic	L2a|LINE|L2	10494	NR_147083	105376992	Hs.736662	NR_147083	ENSG00000275852	LINC01742	-	long intergenic non-protein coding RNA 1742	ncRNA
14.9333-6	chr14	58039536	58039757	+	0.1	NA	intron (NM_001001872, intron 5 of 7)	intron (NM_001001872, intron 5 of 7)	112567	NM_001001872	145407	Hs.26766	NM_001001872	ENSG00000139971	ARMH4	C14orf37|UT2|c14_5376	armadillo like helical domain containing 4	protein-coding
41.9-2	chr14	22583756	22584530	+	0.1	NA	intron (NM_001344, intron 1 of 2)	L2b|LINE|L2	5081	NM_001344	1603	Hs.82890	NM_001344	ENSG00000129562	DAD1	OST2	defender against cell death 1	protein-coding
45.3667	chr2	54727592	54728222	+	0.1	NA	intron (NM_001039753, intron 1 of 40)	intron (NM_001039753, intron 1 of 40)	2895	NM_001039753	400954	Hs.656692	NM_001039753	ENSG00000214595	EML6	-	EMAP like 6	protein-coding
31.5667-5	chr2	209157902	209158352	+	0.1	NA	Intergenic	Intergenic	-265920	NM_001039538	4133	Hs.368281	NM_002374	ENSG00000078018	MAP2	MAP-2|MAP2A|MAP2B|MAP2C	microtubule associated protein 2	protein-coding
19.8-9	chr2	79752167	79752402	+	0.1	NA	intron (NM_001282598, intron 3 of 17)	L2|LINE|L2	-102925	NR_036231	100422888		NR_036231	ENSG00000266436	MIR4264	-	microRNA 4264	ncRNA
15.8667-6	chr4	69886618	69886832	+	0.1	NA	Intergenic	Intergenic	-26580	NM_005420	6783	Hs.479898	NM_005420	ENSG00000109193	SULT1E1	EST|EST-1|ST1E1|STE	sulfotransferase family 1E member 1	protein-coding
28.6-19	chr3	66241009	66241368	+	0.1	NA	intron (NM_001350991, intron 2 of 9)	Tigger2|DNA|TcMar-Tigger	20185	NM_001350991	115286	Hs.379386	NM_173471	ENSG00000144741	SLC25A26	COXPD28|SAMC	solute carrier family 25 member 26	protein-coding
23.8333	chr11	132847119	132847517	+	0.1	NA	intron (NM_001319104, intron 1 of 6)	intron (NM_001319104, intron 1 of 6)	96319	NM_001319103	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding
24.6-11	chr6	70484136	70484671	+	0.1	NA	intron (NM_001351608, intron 10 of 21)	intron (NM_001351608, intron 10 of 21)	-70445	NR_147708	105377849	Hs.669000	NR_147708	ENSG00000224349	LOC105377849	-	uncharacterized LOC105377849	ncRNA
35.6	chr1	26808057	26808595	+	0.1	NA	Intergenic	L1MB3|LINE|L1	-18362	NM_032283	84243	Hs.523710	NM_032283	ENSG00000204160	ZDHHC18	DHHC-18|DHHC18	zinc finger DHHC-type containing 18	protein-coding
31.1333-4	chr2	133297496	133297940	+	0.1	NA	intron (NM_207481, intron 4 of 17)	intron (NM_207481, intron 4 of 17)	31523	NR_110294	101928161	Hs.661917	NR_110294	ENSG00000226953	NCKAP5-AS2	-	NCKAP5 antisense RNA 2	ncRNA
18.7-3	chr18	13481772	13482170	+	0.1	NA	intron (NM_181482, intron 4 of 5)	L2b|LINE|L2	22024	NR_049822	100847080		NR_049822	ENSG00000266146	MIR5190	-	microRNA 5190	ncRNA
12.4333-9	chr4	25475274	25475468	+	0.1	NA	Intergenic	Intergenic	93975	NR_134641	101929161	Hs.125638	NR_134641		LOC101929161	-	uncharacterized LOC101929161	ncRNA
18.9667-7	chr4	39429760	39430068	+	0.1	NA	intron (NM_175737, intron 1 of 4)	intron (NM_175737, intron 1 of 4)	18004	NR_049857	100847065		NR_049857	ENSG00000264621	MIR5591	-	microRNA 5591	ncRNA
26.1667-3	chr2	143292021	143292414	+	0.1	NA	intron (NM_018460, intron 6 of 13)	intron (NM_018460, intron 6 of 13)	162798	NM_018460	55843	Hs.171011	NM_018460	ENSG00000075884	ARHGAP15	BM046	Rho GTPase activating protein 15	protein-coding
26.8333	chr1	158917631	158917991	+	0.1	NA	Intergenic	Intergenic	-13741	NM_198930	149628	Hs.710248	NM_152501	ENSG00000163564	PYHIN1	IFIX	pyrin and HIN domain family member 1	protein-coding
27.9667	chr1	85762261	85762639	+	0.1	NA	intron (NR_146340, intron 54 of 60)	intron (NR_146340, intron 54 of 60)	-54017	NM_001170670	54680	Hs.5111	NM_017953	ENSG00000117174	ZNHIT6	BCD1|C1orf181|NY-BR-75	zinc finger HIT-type containing 6	protein-coding
18.5333-17	chr20	8328470	8328909	+	0.1	NA	intron (NM_182734, intron 2 of 32)	intron (NM_182734, intron 2 of 32)	79985	NR_046809	100874337	Hs.662218	NR_046809	ENSG00000225479	PLCB1-IT1	-	PLCB1 intronic transcript 1	ncRNA
27.4333-10	chr6	70504793	70505305	+	0.1	NA	intron (NM_020819, intron 11 of 20)	L1MC4|LINE|L1	-61881	NM_145267	135154	Hs.418495	NM_145267	ENSG00000154079	SDHAF4	C6orf57|Sdh8	succinate dehydrogenase complex assembly factor 4	protein-coding
16.9-8	chr6	38528065	38528353	+	0.1	NA	intron (NM_001172418, intron 5 of 10)	L1M1|LINE|L1	46613	NR_144472	101929425	Hs.665280	NR_144472	ENSG00000226533	BTBD9-AS1	-	BTBD9 antisense RNA 1	ncRNA
22.8-13	chr4	180983841	180984089	+	0.1	NA	Intergenic	Intergenic	175184	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
42.8333	chr1	221264569	221265152	+	0.1	NA	Intergenic	Intergenic	71436	NR_024236	400804	Hs.722626	NR_024236	ENSG00000234754	C1orf140	-	uncharacterized LOC400804	ncRNA
23.1333-13	chrX	150394936	150395283	+	0.1	NA	intron (NM_001177465, intron 1 of 4)	L1MC1|LINE|L1	31792	NM_001177465	10046	Hs.20136	NM_005491	ENSG00000013619	MAMLD1	CG1|CXorf6|F18|HYSP2	mastermind like domain containing 1	protein-coding
12.2-7	chr6	165064327	165064449	+	0.1	NA	Intergenic	HERVP71A-int|LTR|ERV1	-242325	NR_131926	105378111		NR_131926		MEAT6	-	melanoma-associated transcript 6	ncRNA
32.2333-2	chr1	108618510	108619110	+	0.1	NA	intron (NM_001010883, intron 5 of 10)	AluJb|SINE|Alu	42283	NM_001102592	113802	Hs.7962	NM_144584	ENSG00000162639	HENMT1	C1orf59|HEN1	HEN methyltransferase 1	protein-coding
51.2-4	chr22	31400295	31401087	+	0.1	NA	exon (NM_004147, exon 2 of 9)	exon (NM_004147, exon 2 of 9)	1087	NM_004147	4733	Hs.115242	NM_004147	ENSG00000185721	DRG1	NEDD3	developmentally regulated GTP binding protein 1	protein-coding
25.9-4	chr2	67404520	67405187	+	0.1	NA	exon (NM_019002, exon 5 of 6)	exon (NM_019002, exon 5 of 6)	7520	NM_019002	54465	Hs.353022	NM_019002	ENSG00000143971	ETAA1	ETAA16	ETAA1 activator of ATR kinase	protein-coding
18.2333-6	chr19	23713229	23713412	+	0.1	NA	Intergenic	Intergenic	-26108	NM_138330	171392	Hs.264345	NM_138330	ENSG00000197372	ZNF675	TBZF|TIZ	zinc finger protein 675	protein-coding
29.8667-4	chr21	20537497	20537894	+	0.1	NA	Intergenic	MER52C|LTR|ERV1	265413	NR_109786	387486	Hs.576551	NR_024090	ENSG00000224924	LINC00320	C21orf131|NCRNA00320|PRED14	long intergenic non-protein coding RNA 320	ncRNA
14.9333-11	chr2	218461638	218461984	+	0.1	NA	intron (NM_020935, intron 22 of 25)	AluSz6|SINE|Alu	42688	NM_007127	7429	Hs.654595	NM_007127	ENSG00000127831	VIL1	D2S1471|VIL	villin 1	protein-coding
28.6667-10	chr6	8357597	8358016	+	0.1	NA	Intergenic	Intergenic	77739	NM_001370478	51000	Hs.285847	NM_015948	ENSG00000124786	SLC35B3	C6orf196|CGI-19|PAPST2	solute carrier family 35 member B3	protein-coding
36.3667-2	chr15	80851136	80851799	+	0.1	NA	intron (NM_018689, intron 1 of 28)	L2c|LINE|L2	-9394	NR_030393	693132		NR_030393	ENSG00000208003	MIR549A	MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a	microRNA 549a	ncRNA
29.4667-9	chr6	71215955	71216432	+	0.1	NA	Intergenic	L1ME3E|LINE|L1	-72618	NM_024576	79627	Hs.648434	NM_024576	ENSG00000119900	OGFRL1	dJ331H24.1	opioid growth factor receptor like 1	protein-coding
23.8-10	chr4	2472472	2472859	+	0.1	NA	intron (NM_001185009, intron 2 of 8)	Tigger1|DNA|TcMar-Tigger	3212	NM_001185009	6047	Hs.66394	NM_002938	ENSG00000063978	RNF4	RES4-26|SLX5|SNURF	ring finger protein 4	protein-coding
21.1333-13	chr4	30959439	30959730	+	0.1	NA	intron (NM_001173523, intron 2 of 2)	intron (NM_001173523, intron 2 of 2)	-211560	NR_125935	102723778	Hs.210739	NR_125935	ENSG00000251182	LINC02497	-	long intergenic non-protein coding RNA 2497	ncRNA
35.7333-4	chr14	62643577	62643986	+	0.1	NA	Intergenic	L1MB1|LINE|L1	401677	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
23.0333-3	chr10	13210714	13211002	+	0.1	NA	3' UTR (NM_182751, exon 20 of 20)	3' UTR (NM_182751, exon 20 of 20)	-6411	NR_004394	26827		NR_004394	ENSG00000206625	RNU6-1	RNU6|RNU6A|U6|U6-1	RNA, U6 small nuclear 1	snRNA
47.4333	chr4	98070725	98071414	+	0.1	NA	intron (NM_174952, intron 5 of 10)	L1PA11|LINE|L1	72407	NM_174952	285555	Hs.680226	NM_174952	ENSG00000163116	STPG2	C4orf37	sperm tail PG-rich repeat containing 2	protein-coding
14.3333-3	chr13	21913664	21913861	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-35602	NR_047040	100874182	Hs.148951	NR_047040	ENSG00000226722	LINC00424	-	long intergenic non-protein coding RNA 424	ncRNA
13.1-6	chr4	56073465	56073784	+	0.1	NA	Intergenic	L1PA7|LINE|L1	-96571	NM_020722	57482	Hs.596667	NM_020722	ENSG00000109265	KIAA1211	CRAD	KIAA1211	protein-coding
37.7-2	chr14	22521061	22521598	+	0.1	NA	Intergenic	Intergenic	35733	NR_146543	105370400		NR_146543	ENSG00000259054	LINC02332	-	long intergenic non-protein coding RNA 2332	ncRNA
25.0667-5	chr17	12427036	12427546	+	0.1	NA	Intergenic	MER2|DNA|TcMar-Tigger	-122677	NR_034145	284034	Hs.376614	NR_034144	ENSG00000179136	LINC00670	-	long intergenic non-protein coding RNA 670	ncRNA
24.4-23	chr4	104317875	104318181	+	0.1	NA	Intergenic	Intergenic	-172937	NR_125926	101929468	Hs.480435	NR_125926	ENSG00000245384	CXXC4-AS1	-	CXXC4 antisense RNA 1	ncRNA
42.4333-5	chr4	66896710	66897282	+	0.1	NA	Intergenic	MIRb|SINE|MIR	525004	NR_110747	101927237	Hs.435644	NR_110747	ENSG00000250075	LOC101927237	-	uncharacterized LOC101927237	ncRNA
23.9-10	chr6	170223736	170224146	+	0.1	NA	Intergenic	Intergenic	38628	NR_002787	154449	Hs.447751	NR_002787	ENSG00000230960	LOC154449	-	uncharacterized LOC154449	ncRNA
30.4-7	chr20	53275858	53276465	+	0.1	NA	intron (NM_173485, intron 2 of 2)	MLT1K|LTR|ERVL-MaLR	90878	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding
35.2333-2	chr15	57985489	57986163	+	0.1	NA	intron (NM_170696, intron 6 of 11)	intron (NM_170696, intron 6 of 11)	28197	NM_170697	8854	Hs.643455	NM_003888	ENSG00000128918	ALDH1A2	RALDH(II)|RALDH2|RALDH2-T	aldehyde dehydrogenase 1 family member A2	protein-coding
17.4333-3	chr14	68229232	68229526	+	0.1	NA	intron (NM_133509, intron 7 of 10)	intron (NM_133509, intron 7 of 10)	399408	NR_135816	100996664		NR_135816		LOC100996664	-	uncharacterized LOC100996664	ncRNA
39.5-6	chr8	92754883	92755447	+	0.1	NA	intron (NR_046114, intron 1 of 2)	intron (NR_046114, intron 1 of 2)	30895	NR_046114	441369	Hs.521683	NR_046114	ENSG00000248858	FLJ46284	-	uncharacterized LOC441369	ncRNA
32.6667-9	chr8	136402034	136402630	+	0.1	NA	Intergenic	L1MA5|LINE|L1	-128466	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
23.9667-9	chr6	43251239	43251600	+	0.1	NA	intron (NM_032538, intron 2 of 14)	intron (NM_032538, intron 2 of 14)	7938	NM_032538	84630	Hs.485436	NM_032538	ENSG00000146216	TTBK1	BDTK	tau tubulin kinase 1	protein-coding
7.4-3	chr11	112062251	112062378	+	0.1	NA	intron (NM_001931, intron 13 of 13)	intron (NM_001931, intron 13 of 13)	11857	NM_001082619	120379	Hs.420662	NM_138789	ENSG00000150773	PIH1D2	-	PIH1 domain containing 2	protein-coding
18.4333-4	chr17	58444621	58444834	+	0.1	NA	intron (NM_001080439, intron 5 of 5)	L1MB2|LINE|L1	-27145	NM_017763	54894	Hs.584916	NM_017763	ENSG00000108375	RNF43	RNF124|SSPCS|URCC	ring finger protein 43	protein-coding
15.4333-12	chr8	137508594	137508748	+	0.1	NA	Intergenic	Intergenic	-95083	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
34.0667-5	chr22	46822813	46823310	+	0.1	NA	intron (NM_001284305, intron 4 of 12)	intron (NM_001284305, intron 4 of 12)	49134	NM_001284305	25771	Hs.435044	NM_014346	ENSG00000054611	TBC1D22A	C22orf4|HSC79E021	TBC1 domain family member 22A	protein-coding
12.0667-3	chr12	32570778	32570909	+	0.1	NA	intron (NM_001370297, intron 2 of 14)	intron (NM_001370297, intron 2 of 14)	36550	NM_001304480	121512	Hs.117835	NM_139241	ENSG00000139132	FGD4	CMT4H|FRABP|ZFYVE6	FYVE, RhoGEF and PH domain containing 4	protein-coding
16.9667-8	chr5	117808329	117808625	+	0.1	NA	intron (NR_104997, intron 1 of 2)	MamRTE1|LINE|RTE-BovB	78116	NR_104997	102467224	Hs.134230	NR_104997		LINC02147	-	long intergenic non-protein coding RNA 2147	ncRNA
25.0333-6	chr15	68835803	68836221	+	0.1	NA	Intergenic	L1ME2|LINE|L1	-15117	NM_006305	8125	Hs.458747	NM_006305	ENSG00000140350	ANP32A	C15orf1|HPPCn|I1PP2A|LANP|MAPM|PHAP1|PHAPI|PP32	acidic nuclear phosphoprotein 32 family member A	protein-coding
18.3667-2	chr10	104653499	104653853	+	0.1	NA	intron (NM_014978, intron 1 of 26)	L1MA2|LINE|L1	12386	NM_014978	22986	Hs.671950	NM_014978	ENSG00000156395	SORCS3	SORCS	sortilin related VPS10 domain containing receptor 3	protein-coding
11.5-3	chr11	31217395	31217561	+	0.1	NA	intron (NM_001367979, intron 9 of 38)	intron (NM_001367979, intron 9 of 38)	152261	NM_181807	341019	Hs.127405	NM_020869	ENSG00000170959	DCDC1	DCDC5	doublecortin domain containing 1	protein-coding
13.6667-6	chr2	27956778	27957055	+	0.1	NA	intron (NM_199193, intron 4 of 13)	Plat_L3|LINE|CR1	-39451	NR_036230	100422965		NR_036230	ENSG00000265321	MIR4263	-	microRNA 4263	ncRNA
37.0667-6	chr6	143894915	143895364	+	0.1	NA	intron (NM_001013623, intron 4 of 7)	intron (NM_001013623, intron 4 of 7)	30665	NM_001013623	153918	Hs.121188	NM_001013623	ENSG00000118491	ZC2HC1B	C6orf94|FAM164B|dJ468K18.5	zinc finger C2HC-type containing 1B	protein-coding
13.4333-7	chr6	138535190	138535380	+	0.1	NA	intron (NM_020464, intron 1 of 6)	AluJb|SINE|Alu	-35791	NM_001144060	57224	Hs.652741	NM_020464	ENSG00000135540	NHSL1	C6orf63	NHS like 1	protein-coding
30.3	chr12	12403547	12404025	+	0.1	NA	intron (NM_001300742, intron 2 of 3).2	intron (NM_001300742, intron 2 of 3).2	46708	NM_001300742	118426	Hs.504805	NM_058169	ENSG00000165714	BORCS5	LOH12CR1|LOH1CR12	BLOC-1 related complex subunit 5	protein-coding
18.9333-4	chr15	100388675	100388952	+	0.1	NA	intron (NR_120374, intron 1 of 4)	L1MC4|LINE|L1	15874	NR_120374	102723320	Hs.416099	NR_120374		CERS3-AS1	-	CERS3 antisense RNA 1	ncRNA
19.6333-12	chr8	58747919	58748279	+	0.1	NA	Intergenic	Intergenic	-88246	NM_003580	8439	Hs.372000	NM_003580	ENSG00000035681	NSMAF	FAN|GRAMD5	neutral sphingomyelinase activation associated factor	protein-coding
27-21	chr6	37961992	37962560	+	0.1	NA	intron (NM_021943, intron 2 of 5)	L1M1|LINE|L1	142549	NM_021943	60685	Hs.36959	NM_021943	ENSG00000156639	ZFAND3	TEX27	zinc finger AN1-type containing 3	protein-coding
11.9667-4	chr6	2602643	2602762	+	0.1	NA	Intergenic	L1M5|LINE|L1	-31798	NR_149119	105374885		NR_149118		LINC02521	-	long intergenic non-protein coding RNA 2521	ncRNA
12.6-2	chr1	203152488	203152642	+	0.1	NA	intron (NM_001365066, intron 2 of 2)	intron (NM_001365066, intron 2 of 2)	23261	NM_004997	4608	Hs.927	NM_004997	ENSG00000133055	MYBPH	-	myosin binding protein H	protein-coding
25.8-18	chr20	62234055	62234528	+	0.1	NA	intron (NR_160555, intron 2 of 3)	MER103C|DNA|hAT-Charlie	-4230	NM_014835	9885	Hs.473254	NM_014835	ENSG00000130703	OSBPL2	DFNA67|DNFA67|ORP-2|ORP2	oxysterol binding protein like 2	protein-coding
27.2-11	chr6	86216581	86216934	+	0.1	NA	Intergenic	Intergenic	-538024	NR_003038	387066	Hs.292457	NR_003038	ENSG00000203875	SNHG5	C6orf160|LINC00044|NCRNA00044|U50HG	small nucleolar RNA host gene 5	ncRNA
18.4333-9	chr6	14072578	14072842	+	0.1	NA	Intergenic	Intergenic	-44546	NM_001251901	9308	Hs.595133	NM_004233	ENSG00000112149	CD83	BL11|HB15	CD83 molecule	protein-coding
27.2333-8	chr6	167480936	167481393	+	0.1	NA	Intergenic	AluSq2|SINE|Alu	-8374	NR_134591	105378127	Hs.58456	NR_134591		LOC105378127	-	uncharacterized LOC105378127	ncRNA
40.2-4	chr14	68764618	68765043	+	0.1	NA	Intergenic	MLT1I|LTR|ERVL-MaLR	29084	NM_001244698	677	Hs.85155	NM_004926	ENSG00000185650	ZFP36L1	BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1	ZFP36 ring finger protein like 1	protein-coding
7.5-5	chr8	110706283	110706397	+	0.1	NA	Intergenic	Intergenic	321093	NR_125417	101927459	Hs.575543	NR_125416	ENSG00000253877	LINC01608	-	long intergenic non-protein coding RNA 1608	ncRNA
23.4333-4	chr12	112435349	112435701	+	0.1	NA	intron (NM_001330437, intron 1 of 15)	intron (NM_001330437, intron 1 of 15)	16578	NM_080601	5781	Hs.506852	NM_002834	ENSG00000179295	PTPN11	BPTP3|CFC|JMML|METCDS|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2	protein tyrosine phosphatase non-receptor type 11	protein-coding
43.0333-6	chr8	129282079	129282851	+	0.1	NA	Intergenic	Intergenic	-41225	NR_033916	728724	Hs.49902	NR_033916	ENSG00000229140	LINC00977	-	long intergenic non-protein coding RNA 977	ncRNA
21.2333-3	chr10	28619613	28620075	+	0.1	NA	3' UTR (NM_016628, exon 14 of 14)	3' UTR (NM_016628, exon 14 of 14)	-57677	NM_012342	25805	Hs.533336	NM_012342	ENSG00000095739	BAMBI	NMA	BMP and activin membrane bound inhibitor	protein-coding
18.4-9	chr4	21351469	21351778	+	0.1	NA	intron (NM_147182, intron 2 of 8)	MLT1B|LTR|ERVL-MaLR	-47717	NM_147183	80333	Hs.655705	NM_025221	ENSG00000185774	KCNIP4	CALP|KCHIP4	potassium voltage-gated channel interacting protein 4	protein-coding
29.2-6	chr3	9550372	9550741	+	0.1	NA	intron (NM_198560, intron 2 of 3)	intron (NM_198560, intron 2 of 3)	3266	NM_198560	375323	Hs.56782	NM_198560	ENSG00000156959	LHFPL4	GARLH4	LHFPL tetraspan subfamily member 4	protein-coding
31.1333-5	chr2	166295198	166295664	+	0.1	NA	intron (NR_110260, intron 9 of 11)	Tigger3a|DNA|TcMar-Tigger	80513	NM_001365536	6335	Hs.439145	NM_002977	ENSG00000169432	SCN9A	ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP	sodium voltage-gated channel alpha subunit 9	protein-coding
13.3-4	chr2	146579463	146579723	+	0.1	NA	Intergenic	Intergenic	-7464	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
11.3667-3	chr11	38054720	38054866	+	0.1	NA	Intergenic	Intergenic	116192	NR_135110	105376633	Hs.135690	NR_135110	ENSG00000254516	LINC02760	-	long intergenic non-protein coding RNA 2760	ncRNA
28.0333-6	chr3	18017438	18017777	+	0.1	NA	intron (NR_161333, intron 3 of 4)	L2c|LINE|L2	55055	NR_161333	339862	Hs.652981	NR_046199		LOC339862	-	uncharacterized LOC339862	ncRNA
24.6667-6	chr16	59590999	59591322	+	0.1	NA	Intergenic	ERVL-B4-int|LTR|ERVL	164031	NR_028471	644649	Hs.250392	NR_028471		APOOP5	-	apolipoprotein O pseudogene 5	pseudo
37.3-3	chr20	62039946	62040393	+	0.1	NA	intron (NM_003185, intron 1 of 14)	L1ME1|LINE|L1	-24633	NR_130463	100422838		NR_130463	ENSG00000265306	MIR3195	-	microRNA 3195	ncRNA
15.7333-4	chr11	13353290	13353536	+	0.1	NA	intron (NM_001351816, intron 3 of 19)	7SK|RNA|RNA	75686	NR_147785	406	Hs.65734	NM_001178	ENSG00000133794	ARNTL	BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5	aryl hydrocarbon receptor nuclear translocator like	protein-coding
31.4667-6	chr4	175768424	175768738	+	0.1	NA	intron (NM_201592, intron 1 of 6)	intron (NM_201592, intron 1 of 6)	19095	NM_001261448	2823	Hs.75819	NM_005277	ENSG00000150625	GPM6A	GPM6|M6A	glycoprotein M6A	protein-coding
24.5333-11	chr4	82947510	82947755	+	0.1	NA	intron (NM_001288996, intron 2 of 10)	intron (NM_001288996, intron 2 of 10)	-46716	NR_034076	100499177	Hs.728916	NR_034075	ENSG00000251022	THAP9-AS1	-	THAP9 antisense RNA 1	ncRNA
21.8-13	chr5	181242266	181242664	+	0.1	NA	promoter-TSS (NR_002592)	promoter-TSS (NR_002592)	-576	NR_002592	619571		NR_002592	ENSG00000272296	SNORD96A	U96A	small nucleolar RNA, C/D box 96A	snoRNA
14.2333-17	chr8	135101087	135101327	+	0.1	NA	Intergenic	L1MA7|LINE|L1	-132924	NR_120396	286094	Hs.440978	NR_026706	ENSG00000254083	LINC01591	-	long intergenic non-protein coding RNA 1591	ncRNA
42.4333-4	chr3	120888775	120889458	+	0.1	NA	Intergenic	Intergenic	-19089	NR_145517	9515	Hs.477315	NM_014980	ENSG00000145087	STXBP5L	LLGL4	syntaxin binding protein 5 like	protein-coding
43	chr3	13891258	13892084	+	0.1	NA	Intergenic	Intergenic	-11600	NM_004625	7476	Hs.72290	NM_004625	ENSG00000154764	WNT7A	Wnt-7a	Wnt family member 7A	protein-coding
32.1-5	chr2	108023303	108023948	+	0.1	NA	Intergenic	Intergenic	29130	NR_135071	107178918		NR_135071	ENSG00000231221	LINC01593	-	long intergenic non-protein coding RNA 1593	ncRNA
25.7-5	chr12	24253356	24253793	+	0.1	NA	intron (NM_001261414, intron 4 of 16)	intron (NM_001261414, intron 4 of 16)	30303	NR_120473	101928471	Hs.569156	NR_120472	ENSG00000256120	SOX5-AS1	-	SOX5 antisense RNA 1	ncRNA
21.4667	chr1	196967710	196968139	+	0.1	NA	Intergenic	Intergenic	-9613	NM_030787	81494	Hs.282594	NM_030787	ENSG00000134389	CFHR5	CFHL5|CFHR5D|FHR-5|FHR5	complement factor H related 5	protein-coding
25.8667	chr1	171608628	171609109	+	0.1	NA	Intergenic	LTR16|LTR|ERVL	-10895	NM_001368164	110806290		NM_001368164		MYOCOS	-	myocilin opposite strand	protein-coding
26.3333-7	chr3	129753876	129754350	+	0.1	NA	intron (NM_001349271, intron 2 of 4)	L1MC3|LINE|L1	-30000	NM_001349274	23023	Hs.477547	NM_015008	ENSG00000172765	TMCC1	-	transmembrane and coiled-coil domain family 1	protein-coding
16.4-3	chr10	25273232	25273623	+	0.1	NA	intron (NM_020752, intron 2 of 10)	intron (NM_020752, intron 2 of 10)	-97151	NR_027333	100128811	Hs.700407	NR_027333	ENSG00000233642	GPR158-AS1	-	GPR158 antisense RNA 1	ncRNA
18.4-2	chr11	18292748	18293151	+	0.1	NA	exon (NM_007216, exon 14 of 22)	exon (NM_007216, exon 14 of 22)	26685	NM_199161	6288	Hs.632144	NM_000331	ENSG00000173432	SAA1	PIG4|SAA|SAA2|TP53I4	serum amyloid A1	protein-coding
6.73333	chr18	69834182	69834265	+	0.1	NA	intron (NM_152721, intron 7 of 7)	L1MA4|LINE|L1	113650	NM_001303618	10666	Hs.660130	NM_006566	ENSG00000150637	CD226	DNAM-1|DNAM1|PTA1|TLiSA1	CD226 molecule	protein-coding
22.4333-11	chr2	222392286	222392532	+	0.1	NA	Intergenic	Tigger4|DNA|TcMar-Tigger	-31579	NM_001320834	130367	Hs.210043	NM_152386	ENSG00000163082	SGPP2	SPP2|SPPase2	sphingosine-1-phosphate phosphatase 2	protein-coding
35.1667-3	chr11	65623027	65623575	+	0.1	NA	intron (NM_032223, intron 11 of 34)	intron (NM_032223, intron 11 of 34)	6989	NM_032223	399909	Hs.380801	NM_032223	ENSG00000197136	PCNX3	PCNXL3	pecanex 3	protein-coding
9.5-6	chr8	115545833	115545928	+	0.1	NA	intron (NM_001282902, intron 4 of 5)	intron (NM_001282902, intron 4 of 5)	122133	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
21.3333-3	chr22	22901793	22902063	+	0.1	NA	Intergenic	Intergenic	14112	NM_001178126	100423062	Hs.449574	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding
20.2667-4	chr13	88465426	88465628	+	0.1	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	-75302	NR_047021	100874168	Hs.126406	NR_047021		LINC00433	-	long intergenic non-protein coding RNA 433	ncRNA
13.3667-12	chr5	117921743	117922057	+	0.1	NA	intron (NR_104997, intron 1 of 2)	intron (NR_104997, intron 1 of 2)	191539	NR_104997	102467224	Hs.134230	NR_104997		LINC02147	-	long intergenic non-protein coding RNA 2147	ncRNA
21.6667-5	chr3	114367262	114367522	+	0.1	NA	intron (NR_038993, intron 6 of 8)	AluJb|SINE|Alu	15581	NR_038993	100131117	Hs.122417	NR_038993	ENSG00000241560	ZBTB20-AS1	-	ZBTB20 antisense RNA 1	ncRNA
29.1667	chr1	174096235	174096635	+	0.1	NA	Intergenic	Intergenic	62852	NR_121197	102724601	Hs.563791	NR_121197	ENSG00000227373	RABGAP1L-DT	-	RABGAP1L divergent transcript	ncRNA
12.9-3	chr2	13428663	13428919	+	0.1	NA	Intergenic	Intergenic	-421778	NR_038434	100506474	Hs.242196	NR_038434	ENSG00000225649	LOC100506474	-	uncharacterized LOC100506474	ncRNA
12.2-2	chr12	39441629	39441792	+	0.1	NA	intron (NM_001173464, intron 1 of 37)	intron (NM_001173464, intron 1 of 37)	1410	NM_017641	55605	Hs.374201	NM_017641	ENSG00000139116	KIF21A	CFEOM1|FEOM1|FEOM3A	kinesin family member 21A	protein-coding
13.9333-2	chr10	13701205	13701380	+	0.1	NA	intron (NM_001318336, intron 13 of 23)	intron (NM_001318336, intron 13 of 23)	6275	NM_001318338	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding
38.9667-4	chr3	81340649	81341303	+	0.1	NA	Intergenic	Intergenic	347108	NR_132411	728290	Hs.563132	NR_132411	ENSG00000243694	LINC02027	-	long intergenic non-protein coding RNA 2027	ncRNA
16.2-15	chr4	40911261	40911548	+	0.1	NA	intron (NM_173075, intron 9 of 16)	MIR|SINE|MIR	-54212	NM_001166053	323	Hs.479602	NM_004307	ENSG00000163697	APBB2	FE65L|FE65L1	amyloid beta precursor protein binding family B member 2	protein-coding
33.0333	chr1	42303220	42303864	+	0.1	NA	intron (NM_001198850, intron 2 of 12)	intron (NM_001198850, intron 2 of 12)	31413	NM_001198851	22887	Hs.26023	NM_014947	ENSG00000198815	FOXJ3	-	forkhead box J3	protein-coding
23.9333-8	chr3	50204570	50205021	+	0.1	NA	promoter-TSS (NM_006841)	promoter-TSS (NM_006841)	-476	NM_006841	10991	Hs.76460	NM_006841	ENSG00000188338	SLC38A3	G17|NAT1|SN1|SNAT3	solute carrier family 38 member 3	protein-coding
8.7-3	chr7	67979068	67979156	+	0.1	NA	Intergenic	L1MA9|LINE|L1	-41141	NR_120514	102723427	Hs.583491	NR_120514	ENSG00000225209	LOC102723427	-	uncharacterized LOC102723427	ncRNA
20.6-7	chr3	53123516	53123767	+	0.1	NA	intron (NM_052859, intron 3 of 12)	intron (NM_052859, intron 3 of 12)	6794	NM_052859	91869	Hs.631910	NM_052859	ENSG00000163933	RFT1	CDG1N	RFT1 homolog	protein-coding
41.9-4	chr17	39011682	39012317	+	0.1	NA	Intergenic	LTR1D1|LTR|ERV1	15111	NR_135645	105371766	Hs.311469	NR_135645	ENSG00000266013	LINC02079	-	long intergenic non-protein coding RNA 2079	ncRNA
18.6667-2	chr11	45335314	45335803	+	0.1	NA	Intergenic	LTR67B|LTR|ERVL	-19813	NR_120557	101928812	Hs.444059	NR_120557	ENSG00000254427	LINC02696	-	long intergenic non-protein coding RNA 2696	ncRNA
18.5333-24	chrX	81347682	81347900	+	0.1	NA	Intergenic	Intergenic	145689	NM_003022	6451	Hs.108029	NM_003022	ENSG00000131171	SH3BGRL	HEL-S-115|SH3BGR	SH3 domain binding glutamate rich protein like	protein-coding
12.9667-6	chr15	83526772	83527039	+	0.1	NA	intron (NM_001324186, intron 2 of 9)	L1MA4A|LINE|L1	36291	NM_001324187	6457	Hs.270055	NM_003027	ENSG00000140600	SH3GL3	CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13	SH3 domain containing GRB2 like 3, endophilin A3	protein-coding
9.53333-5	chr3	42959617	42959712	+	0.1	NA	Intergenic	L1M5|LINE|L1	-19647	NM_001129908	729085	Hs.729533	NM_001129908	ENSG00000144649	GASK1A	C3orf41|FAM198A	golgi associated kinase 1A	protein-coding
7.9-2	chr3	22099700	22099810	+	0.1	NA	Intergenic	Intergenic	142616	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
31.4667-3	chr10	112718213	112718834	+	0.1	NA	intron (NM_001365713, intron 8 of 8)	intron (NM_001365713, intron 8 of 8)	84353	NR_036177	100422909		NR_036177	ENSG00000264763	MIR4295	-	microRNA 4295	ncRNA
24.1333-3	chr13	87838105	87838662	+	0.1	NA	Intergenic	Intergenic	-27863	NR_104059	101930749	Hs.539610	NR_104059	ENSG00000223404	LINC00397	-	long intergenic non-protein coding RNA 397	ncRNA
30.9667	chr19	49184856	49185397	+	0.1	NA	intron (NM_001321281, intron 10 of 22)	L1M4|LINE|L1	27334	NM_001321285	54795	Hs.467101	NM_017636	ENSG00000130529	TRPM4	LTrpC4|PFHB1B|TRPM4B|hTRPM4	transient receptor potential cation channel subfamily M member 4	protein-coding
17.7333-4	chr12	132148058	132148382	+	0.1	NA	intron (NM_024078, intron 7 of 14)	intron (NM_024078, intron 7 of 14)	3763	NM_024078	79050	Hs.558536	NM_024078	ENSG00000184967	NOC4L	NET49|NOC4|UTP19	nucleolar complex associated 4 homolog	protein-coding
17.8-13	chr4	35355491	35355670	+	0.1	NA	Intergenic	Intergenic	888359	NR_146893	116984	Hs.479451	NM_015230	ENSG00000047365	ARAP2	CENTD1|PARX	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	protein-coding
45.3667-2	chr5	16312105	16312769	+	0.1	NA	Intergenic	Intergenic	128665	NR_104625	101929505	Hs.639360	NR_104625	ENSG00000248150	LINC02150	-	long intergenic non-protein coding RNA 2150	ncRNA
26.1-10	chr3	73480743	73481073	+	0.1	NA	intron (NM_015009, intron 3 of 9)	intron (NM_015009, intron 3 of 9)	-6276	NM_001303141	23024	Hs.660347	NM_015009	ENSG00000121440	PDZRN3	LNX3|SEMACAP3|SEMCAP3	PDZ domain containing ring finger 3	protein-coding
15.3333-11	chr8	63632361	63632622	+	0.1	NA	Intergenic	Intergenic	-136939	NR_038875	286184	Hs.586402	NR_038875	ENSG00000253734	LINC01289	-	long intergenic non-protein coding RNA 1289	ncRNA
22-2	chr10	54989592	54989994	+	0.1	NA	intron (NM_001354404, intron 3 of 34)	THE1B-int|LTR|ERVL-MaLR	-188502	NM_001142767	65217	Hs.280209	NM_033056	ENSG00000150275	PCDH15	CDHR15|DFNB23|USH1F	protocadherin related 15	protein-coding
32.4333-3	chr16	68952097	68952639	+	0.1	NA	intron (NM_024562, intron 14 of 17)	intron (NM_024562, intron 14 of 17)	108837	NM_024562	79613	Hs.13526	NM_024562	ENSG00000103047	TANGO6	TMCO7	transport and golgi organization 6 homolog	protein-coding
25.4333-4	chr14	49331245	49331501	+	0.1	NA	Intergenic	Intergenic	255007	NM_001030001	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29|uS14	ribosomal protein S29	protein-coding
8.7	chr19	38016433	38016630	+	0.1	NA	intron (NM_015073, intron 1 of 21)	AluSz|SINE|Alu	109323	NM_015073	23094	Hs.655502	NM_015073	ENSG00000105738	SIPA1L3	CTRCT45|SPAL3|SPAR3	signal induced proliferation associated 1 like 3	protein-coding
18.9-14	chr6	52215355	52215735	+	0.1	NA	Intergenic	L2b|LINE|L2	28955	NM_052872	112744	Hs.272295	NM_052872	ENSG00000112116	IL17F	CANDF6|IL-17F|ML-1|ML1	interleukin 17F	protein-coding
15.0333-12	chr9	97042020	97042195	+	0.1	NA	Intergenic	MER89|LTR|ERV1	-2464	NM_001201575	1515	Hs.610096	NM_001333	ENSG00000136943	CTSV	CATL2|CTSL2|CTSU	cathepsin V	protein-coding
17.9-10	chr5	45188514	45188780	+	0.1	NA	Intergenic	Intergenic	379700	NM_016640	10884	Hs.124165	NM_016640	ENSG00000112996	MRPS30	MRP-S30|PAP|PDCD9|S30mt	mitochondrial ribosomal protein S30	protein-coding
35.4333-4	chr11	108527765	108528458	+	0.1	NA	intron (NM_001144765, intron 1 of 2)	intron (NM_001144765, intron 1 of 2)	10066	NM_001144765	23086	Hs.28540	NM_015065	ENSG00000110723	EXPH5	SLAC2-B|SLAC2B	exophilin 5	protein-coding
17.8-20	chr7	119750147	119750400	+	0.1	NA	TTS (NR_131961)	TTS (NR_131961)	157102	NR_131962	105375475	Hs.566654	NR_131960	ENSG00000225546	LINC02476	LVCAT5	long intergenic non-protein coding RNA 2476	ncRNA
26.9333-5	chr14	25620772	25621199	+	0.1	NA	Intergenic	Intergenic	-570688	NM_001351940	29091	Hs.508958	NM_014178	ENSG00000168952	STXBP6	HSPC156|amisyn	syntaxin binding protein 6	protein-coding
19.5333-5	chr20	45832643	45833034	+	0.1	NA	promoter-TSS (NM_001042632)	promoter-TSS (NM_001042632)	-961	NM_001042633	90203	Hs.472854	NM_033421	ENSG00000124104	SNX21	C20orf161|PP3993|SNX-L|dJ337O18.4	sorting nexin family member 21	protein-coding
21.3667-10	chr5	19144537	19144993	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	741507	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
14.1-3	chr18	10013120	10013428	+	0.1	NA	Intergenic	FRAM|SINE|Alu	99258	NM_194434	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding
34.9333-6	chr9	120326382	120326732	+	0.1	NA	Intergenic	L2c|LINE|L2	-81507	NR_029604	406939		NR_029604	ENSG00000207814	MIR147A	MIR147|MIRN147|hsa-mir-147a	microRNA 147a	ncRNA
23.7333	chr1	3060533	3060840	+	0.1	NA	intron (NR_015440, intron 3 of 5)	intron (NR_015440, intron 3 of 5)	7039	NR_024371	440556	Hs.531041	NM_198543	ENSG00000177133	PRDM16-DT	LINC00982|lnc-dPrdm16	PRDM16 divergent transcript	ncRNA
21.0667-14	chr9	85569699	85570100	+	0.1	NA	intron (NM_015239, intron 25 of 25)	intron (NM_015239, intron 25 of 25)	172130	NM_001286715	23287	Hs.719980	NM_015239	ENSG00000135049	AGTPBP1	CCP1|CONDCA|NNA1	ATP/GTP binding protein 1	protein-coding
27.6-9	chr4	105372236	105372791	+	0.1	NA	intron (NM_176869, intron 10 of 11)	MLT2C2|LTR|ERVL	-19632	NR_126420	104384744	Hs.624109	NR_126420		TET2-AS1	-	TET2 antisense RNA 1	ncRNA
10.2667-8	chr9	75904541	75904704	+	0.1	NA	intron (NR_120409, intron 1 of 19)	L1MB8|LINE|L1	13949	NM_006200	5125	Hs.368542	NM_006200	ENSG00000099139	PCSK5	PC5|PC6|PC6A|SPC6	proprotein convertase subtilisin/kexin type 5	protein-coding
19.5333-11	chr9	92220979	92221296	+	0.1	NA	intron (NR_073446, intron 32 of 32)	L1MCa|LINE|L1	-29981	NM_001350291	138652	Hs.742918	NM_001350291		PRSS47	-	serine protease 47	protein-coding
10.6-2	chr14	39689081	39689300	+	0.1	NA	Intergenic	Intergenic	-256690	NM_203301	254170	Hs.146632	NM_203301	ENSG00000165355	FBXO33	BMND12|Fbx33|c14_5247	F-box protein 33	protein-coding
31.5-8	chr17	57647495	57648113	+	0.1	NA	intron (NM_001322250, intron 10 of 13)	AluSx|SINE|Alu	-39392	NR_110807	101927539	Hs.680439	NR_110807	ENSG00000263499	LOC101927539	-	uncharacterized LOC101927539	ncRNA
25.2667-5	chr15	72593006	72593330	+	0.1	NA	3' UTR (NM_005744, exon 14 of 14)	3' UTR (NM_005744, exon 14 of 14)	5951	NR_030359	693215		NR_030359	ENSG00000283798	MIR630	MIRN630|hsa-mir-630	microRNA 630	ncRNA
19.4-12	chr3	107424872	107425119	+	0.1	NA	Intergenic	Intergenic	-5935	NR_110039	101929607	Hs.252565	NR_110039	ENSG00000273125	LINC01990	-	long intergenic non-protein coding RNA 1990	ncRNA
17.8667-3	chr11	103517363	103517698	+	0.1	NA	Intergenic	LTR16E2|LTR|ERVL	-332376	NR_039842	100616457		NR_039842	ENSG00000264200	MIR4693	-	microRNA 4693	ncRNA
48.2	chr10	22879058	22879990	+	0.1	NA	Intergenic	L1PB3|LINE|L1	-48500	NM_001282747	219681	Hs.659807	NM_173081	ENSG00000165309	ARMC3	CT81|KU-CT-1	armadillo repeat containing 3	protein-coding
23.5667-9	chr5	123736029	123736496	+	0.1	NA	Intergenic	LTR16A|LTR|ERVL	190845	NM_001044723	1456	Hs.129206	NM_004384	ENSG00000151292	CSNK1G3	CKI-gamma 3|CSNK1G3L	casein kinase 1 gamma 3	protein-coding
43.0667-7	chr5	88640884	88641352	+	0.1	NA	intron (NR_152235, intron 2 of 3)	MLT1B|LTR|ERVL-MaLR	25821	NR_030741	407047		NR_030741	ENSG00000284447	MIR9-2	MIRN9-2|hsa-mir-9-2|miRNA9-2|mir-9-2	microRNA 9-2	ncRNA
29.6333-6	chr6	37745510	37745874	+	0.1	NA	Intergenic	AluSx4|SINE|Alu	-47809	NM_153487	266727	Hs.437993	NM_153487	ENSG00000112139	MDGA1	GPIM|MAMDC3	MAM domain containing glycosylphosphatidylinositol anchor 1	protein-coding
36.7-4	chr14	105519744	105520268	+	0.1	NA	Intergenic	L1MB8|LINE|L1	-6577	NM_025268	80757	Hs.157527	NM_025268	ENSG00000184986	TMEM121	TMEM121A|hole	transmembrane protein 121	protein-coding
78	chr9	84575392	84576296	+	0.1	NA	Intergenic	Intergenic	-92614	NM_001291937	4915	Hs.494312	NM_006180	ENSG00000148053	NTRK2	EIEE58|GP145-TrkB|OBHD|TRKB|trk-B	neurotrophic receptor tyrosine kinase 2	protein-coding
14.1333-11	chr6	21917233	21917464	+	0.1	NA	intron (NR_015410, intron 5 of 11)	intron (NR_015410, intron 5 of 11)	229845	NR_034143	729177	Hs.730673	NR_034143	ENSG00000260455	NBAT1	CASC14|NBAT-1	neuroblastoma associated transcript 1	ncRNA
13.5333-5	chr14	55416962	55417110	+	0.1	NA	intron (NM_199047, intron 6 of 6)	intron (NM_199047, intron 6 of 6)	-5178	NM_014924	22863	Hs.414809	NM_014924	ENSG00000126775	ATG14	ATG14L|BARKOR|KIAA0831	autophagy related 14	protein-coding
29.7333-16	chr8	129599834	129600205	+	0.1	NA	intron (NR_130917, intron 1 of 3)	L1PA10|LINE|L1	-25001	NR_130919	137196	Hs.679457	NR_130917	ENSG00000229140	CCDC26	RAM	CCDC26 long non-coding RNA	ncRNA
20.8-9	chr2	15409349	15409688	+	0.1	NA	intron (NR_052013, intron 25 of 50)	L1MEd|LINE|L1	151816	NM_015909	51594	Hs.467759	NM_015909	ENSG00000151779	NBAS	ILFS2|NAG|SOPH	neuroblastoma amplified sequence	protein-coding
26.5333-9	chr4	16516535	16516869	+	0.1	NA	intron (NM_001304435, intron 5 of 7)	intron (NM_001304435, intron 5 of 7)	290039	NR_027697	202020	Hs.445315	NM_152684	ENSG00000263327	TAPT1-AS1	-	TAPT1 antisense RNA 1 (head to head)	ncRNA
22-12	chr7	23233685	23234070	+	0.1	NA	Intergenic	AluSx|SINE|Alu	-12898	NM_001005340	10457	Hs.190495	NM_002510	ENSG00000136235	GPNMB	HGFIN|NMB|PLCA3	glycoprotein nmb	protein-coding
6.83333	chr13	50978777	50978904	+	0.1	NA	Intergenic	Intergenic	-68128	NR_046552	100874255	Hs.741501	NR_046552		RNASEH2B-AS1	-	RNASEH2B antisense RNA 1	ncRNA
26.4333-2	chr10	81314194	81314785	+	0.1	NA	Intergenic	Intergenic	-560705	NM_001370083	10718	Hs.125119	NM_001010848	ENSG00000185737	NRG3	HRG3|pro-NRG3	neuregulin 3	protein-coding
31.4-3	chr14	27089057	27089437	+	0.1	NA	Intergenic	Intergenic	180605	NR_036193	100423019		NR_036193	ENSG00000265165	MIR4307	-	microRNA 4307	ncRNA
16.8667-10	chr22	41949857	41950250	+	0.1	NA	Intergenic	Charlie15a|DNA|hAT-Charlie	-2134	NR_024355	339674	Hs.517656	NR_024355	ENSG00000205704	LINC00634	BK250D10.8	long intergenic non-protein coding RNA 634	ncRNA
16.4-6	chr17	11032886	11033192	+	0.1	NA	Intergenic	L1MA10|LINE|L1	-194952	NM_001101387	644139	Hs.553909	NM_001101387	ENSG00000233670	PIRT	-	phosphoinositide interacting regulator of transient receptor potential channels	protein-coding
30.4-8	chr3	106686981	106687438	+	0.1	NA	Intergenic	Intergenic	553429	NR_028303	100302640	Hs.648607	NR_028303	ENSG00000242759	LINC00882	-	long intergenic non-protein coding RNA 882	ncRNA
37.9667-3	chr1	178061645	178062156	+	0.1	NA	Intergenic	MamSINE1|SINE|tRNA-RTE	-23893	NR_151486	730102	Hs.733192	NR_037167	ENSG00000242193	CRYZL2P	-	crystallin zeta like 2, pseudogene	pseudo
15.2-3	chr20	54723696	54724014	+	0.1	NA	Intergenic	MLT1O|LTR|ERVL-MaLR	248262	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
15.4667-4	chr10	85568791	85569089	+	0.1	NA	Intergenic	L1MEf|LINE|L1	-8791	NR_038986	100507470	Hs.585483	NR_038986	ENSG00000234942	GRID1-AS1	-	GRID1 antisense RNA 1	ncRNA
25.4-9	chr2	68130235	68130782	+	0.1	NA	3' UTR (NM_138458, exon 8 of 8)	3' UTR (NM_138458, exon 8 of 8)	27019	NM_001256476	116143	Hs.631877	NM_138458	ENSG00000243667	WDR92	-	WD repeat domain 92	protein-coding
20.9-20	chr5	164026448	164026839	+	0.1	NA	Intergenic	Intergenic	440759	NR_105064	101927835	Hs.735171	NR_105064	ENSG00000253236	LINC02143	-	long intergenic non-protein coding RNA 2143	ncRNA
18.9-6	chr2	10543885	10544224	+	0.1	NA	Intergenic	MLT1H1|LTR|ERVL-MaLR	94326	NR_110597	101929715	Hs.634550	NR_110597		ODC1-DT	lncRNA-MIF	ODC1 divergent transcript	ncRNA
20.3-12	chr3	50666928	50667346	+	0.1	NA	Intergenic	Intergenic	-7790	NM_004947	1795	Hs.476284	NM_004947	ENSG00000088538	DOCK3	MOCA|NEDIDHA|PBP	dedicator of cytokinesis 3	protein-coding
19.0667-8	chr5	146838413	146838646	+	0.1	NA	intron (NM_001271899, intron 2 of 9)	AluSx1|SINE|Alu	40256	NM_181675	5521	Hs.627618	NM_181674	ENSG00000156475	PPP2R2B	B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12	protein phosphatase 2 regulatory subunit Bbeta	protein-coding
15.7667-10	chr3	179574217	179574511	+	0.1	NA	intron (NM_004301, intron 4 of 13)	intron (NM_004301, intron 4 of 13)	11438	NM_004301	86	Hs.435326	NM_004301	ENSG00000136518	ACTL6A	ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K	actin like 6A	protein-coding
27.2667-5	chr14	57373765	57374053	+	0.1	NA	Intergenic	Intergenic	-16677	NM_001011713	122830	Hs.165465	NM_001011713	ENSG00000139977	NAA30	C14orf35|MAK3|Mak3p|NAT12|NAT12P	N(alpha)-acetyltransferase 30, NatC catalytic subunit	protein-coding
24.3333-2	chr12	54660906	54661333	+	0.1	NA	Intergenic	Tigger7|DNA|TcMar-Tigger	-12754	NM_001300854	117159	Hs.350570	NM_053283	ENSG00000161634	DCD	AIDD|DCD-1|DSEP|HCAP|PIF	dermcidin	protein-coding
35.0667-3	chr6	124911121	124911513	+	0.1	NA	non-coding (NR_026876, exon 7 of 7)	non-coding (NR_026876, exon 7 of 7)	-51228	NR_136734	154214	Hs.12876	NM_152553	ENSG00000146373	RNF217	C6orf172|IBRDC1|OSTL|dJ84N20.1	ring finger protein 217	protein-coding
40.0667	chr21	28577401	28578035	+	0.1	NA	Intergenic	MER53|DNA|hAT	38400	NR_026553	118421	Hs.438549	NR_026552	ENSG00000226935	LINC00161	C21orf100|Linc-USP16|NCRNA00161	long intergenic non-protein coding RNA 161	ncRNA
12.3667	chr13	110562914	110563137	+	0.1	NA	Intergenic	Intergenic	-1303	NM_017817	55647	Hs.743563	NM_017817	ENSG00000139832	RAB20	-	RAB20, member RAS oncogene family	protein-coding
14.7333-8	chr3	114010556	114010796	+	0.1	NA	intron (NR_148531, intron 7 of 14)	intron (NR_148531, intron 7 of 14)	45850	NM_020817	57577	Hs.477159	NM_020817	ENSG00000163617	CCDC191	KIAA1407	coiled-coil domain containing 191	protein-coding
36.9333	chr11	54929970	54930511	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	223408	NM_001005272	81318	Hs.554531	NM_001005272	ENSG00000221840	OR4A5	OR11-111	olfactory receptor family 4 subfamily A member 5	protein-coding
36-2	chr12	801821	802294	+	0.1	NA	intron (NM_001184985, intron 1 of 27)	intron (NM_001184985, intron 1 of 27)	49134	NM_213655	65125	Hs.744906	NM_014823	ENSG00000060237	WNK1	HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65	WNK lysine deficient protein kinase 1	protein-coding
23-10	chr9	24244794	24245263	+	0.1	NA	Intergenic	MLT1O|LTR|ERVL-MaLR	300648	NM_001271706	100129669	Hs.573530	NM_001271706	ENSG00000205442	IZUMO3	C9orf134|bA20A20.1	IZUMO family member 3	protein-coding
16.3667-5	chr20	31618937	31619197	+	0.1	NA	Intergenic	AluSq2|SINE|Alu	11881	NR_036161	100422904		NR_036161	ENSG00000264395	MIR3193	-	microRNA 3193	ncRNA
11.2-2	chr15	95516092	95516274	+	0.1	NA	Intergenic	Intergenic	83090	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA
24.7-16	chr7	51011730	51012301	+	0.1	NA	Intergenic	Intergenic	-218562	NM_001371008								
37.0667-3	chr14	64697635	64698469	+	0.1	NA	Intergenic	Intergenic	-6372	NM_001308147	26030	Hs.509637	NM_015549	ENSG00000126822	PLEKHG3	ARHGEF43|KIAA0599	pleckstrin homology and RhoGEF domain containing G3	protein-coding
33.9333-7	chr9	123062987	123063522	+	0.1	NA	intron (NM_012197, intron 13 of 25)	intron (NM_012197, intron 13 of 25)	29611	NM_005294	2844	Hs.722039	NM_005294	ENSG00000011454	GPR21	-	G protein-coupled receptor 21	protein-coding
15.9667-4	chr14	92032158	92032437	+	0.1	NA	intron (NM_004239, intron 2 of 20)	AluSz|SINE|Alu	7762	NM_001321851	9321	Hs.632339	NM_004239	ENSG00000100815	TRIP11	ACG1A|CEV14|GMAP-210|GMAP210|ODCD|TRIP-11|TRIP230	thyroid hormone receptor interactor 11	protein-coding
9.4-4	chr2	66197074	66197221	+	0.1	NA	Intergenic	Intergenic	161181	NR_039938	100616464		NR_039938	ENSG00000264525	MIR4778	-	microRNA 4778	ncRNA
33.3-3	chr4	36246520	36246963	+	0.1	NA	intron (NR_122079, intron 2 of 4)	intron (NR_122079, intron 2 of 4)	-2227	NM_015230	116984	Hs.479451	NM_015230	ENSG00000047365	ARAP2	CENTD1|PARX	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	protein-coding
15.1-16	chr8	84982938	84983204	+	0.1	NA	Intergenic	MER39|LTR|ERV1	-124167	NM_001349639	85444	Hs.193115	NM_033402	ENSG00000133739	LRRCC1	CLERC|CLERK|SAP2|VFL1	leucine rich repeat and coiled-coil centrosomal protein 1	protein-coding
10.2-10	chr8	133025608	133025765	+	0.1	NA	intron (NM_003235, intron 40 of 47)	L1MC2|LINE|L1	20895	NR_107002	102466865		NR_107002	ENSG00000276961	MIR7848	hsa-mir-7848	microRNA 7848	ncRNA
12.1-3	chr12	48455573	48455776	+	0.1	NA	Intergenic	Intergenic	-16991	NM_012404	23519	Hs.532658	NM_012404	ENSG00000139223	ANP32D	PP32R2	acidic nuclear phosphoprotein 32 family member D	protein-coding
35.8667-4	chr5	6933980	6934486	+	0.1	NA	Intergenic	L1MEi|LINE|L1	-106312	NR_036242	100422999		NR_036242	ENSG00000283420	MIR4278	-	microRNA 4278	ncRNA
33.6-3	chr14	42685936	42686577	+	0.1	NA	Intergenic	LTR85c|LTR|Gypsy?	1079400	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
21.5667-4	chr14	83892987	83893367	+	0.1	NA	Intergenic	Intergenic	1250545	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
52.1333-4	chr7	43590085	43591012	+	0.1	NA	intron (NM_004760, intron 1 of 6)	intron (NM_004760, intron 1 of 6)	7440	NM_004760	9263	Hs.709489	NM_004760	ENSG00000164543	STK17A	DRAK1	serine/threonine kinase 17a	protein-coding
15.8-10	chr3	137437780	137438158	+	0.1	NA	Intergenic	L1PA3|LINE|L1	-326346	NM_004189	8403	Hs.248184	NM_004189	ENSG00000168875	SOX14	SOX28	SRY-box transcription factor 14	protein-coding
23-2	chr10	118505994	118506389	+	0.1	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	89457	NM_004248	2834	Hs.248119	NM_004248	ENSG00000119973	PRLHR	GPR10|GR3|PrRPR	prolactin releasing hormone receptor	protein-coding
13.2-6	chr17	76276807	76277030	+	0.1	NA	intron (NM_032134, intron 16 of 18)	intron (NM_032134, intron 16 of 18)	11570	NM_182565	283991	Hs.744981	NM_182565	ENSG00000185262	UBALD2	FAM100B	UBA like domain containing 2	protein-coding
19.8-18	chr4	111057021	111057279	+	0.1	NA	Intergenic	L1MA3|LINE|L1	-196503	NR_030643	100126354		NR_030643	ENSG00000215961	MIR297	MIRN297|hsa-mir-297	microRNA 297	ncRNA
19.2-14	chr7	112266889	112267228	+	0.1	NA	intron (NM_021994, intron 1 of 11)	intron (NM_021994, intron 1 of 11)	60363	NM_021994	11179	Hs.655904	NM_021994	ENSG00000198839	ZNF277	NRIF4|ZNF277P	zinc finger protein 277	protein-coding
17.3667-9	chr4	185268623	185268846	+	0.1	NA	intron (NM_001317781, intron 5 of 18)	intron (NM_001317781, intron 5 of 18)	64497	NM_001317781	83891	Hs.369091	NM_031953	ENSG00000109762	SNX25	MSTP043|SBBI31	sorting nexin 25	protein-coding
14.9-4	chr11	29262867	29263088	+	0.1	NA	Intergenic	Intergenic	-331436	NR_149107	105376606	Hs.577275	NR_149106	ENSG00000255117	LINC02546	-	long intergenic non-protein coding RNA 2546	ncRNA
23.0333-2	chr1	191240991	191241371	+	0.1	NA	Intergenic	L1MB8|LINE|L1	-12683	NR_146892	105371660	Hs.127094	NR_146892	ENSG00000233882	LINC01680	-	long intergenic non-protein coding RNA 1680	ncRNA
47.5-2	chr14	67965998	67966668	+	0.1	NA	intron (NM_133509, intron 7 of 10)	intron (NM_133509, intron 7 of 10)	142741	NM_001321815	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
22.6333	chr1	231543846	231544300	+	0.1	NA	intron (NR_028393, intron 4 of 15)	intron (NR_028393, intron 4 of 15)	15404	NM_005999	7257	Hs.13318	NM_005999	ENSG00000116918	TSNAX	C3PO|TRAX	translin associated factor X	protein-coding
30.0333-2	chr14	53275258	53275614	+	0.1	NA	Intergenic	HERVL18-int|LTR|ERVL	122082	NR_110062	101927620		NR_110062	ENSG00000258731	LOC101927620	-	uncharacterized LOC101927620	ncRNA
8.83333-4	chr20	21366560	21366648	+	0.1	NA	intron (NM_001317960, intron 26 of 29)	intron (NM_001317960, intron 26 of 29)	30922	NM_033176	644524		NM_033176	ENSG00000125816	NKX2-4	NKX2.4|NKX2D	NK2 homeobox 4	protein-coding
33.7-6	chr14	66643208	66643716	+	0.1	NA	intron (NM_001024218, intron 1 of 21)	L1ME3A|LINE|L1	136055	NM_001024218	10243	Hs.208765	NM_020806	ENSG00000171723	GPHN	GEPH|GPH|GPHRYN|HKPX1|MOCODC	gephyrin	protein-coding
21.1-8	chr4	88470266	88470627	+	0.1	NA	intron (NM_016323, intron 9 of 22)	intron (NM_016323, intron 9 of 22)	13327	NM_016323	51191	Hs.26663	NM_016323	ENSG00000138646	HERC5	CEB1|CEBP1	HECT and RLD domain containing E3 ubiquitin protein ligase 5	protein-coding
15.9667-14	chr9	25601872	25602212	+	0.1	NA	Intergenic	Intergenic	76816	NM_001004125	286319	Hs.26268	NM_001004125	ENSG00000198680	TUSC1	CCDC89B|TSG-9|TSG9	tumor suppressor candidate 1	protein-coding
21.8333-9	chr4	101007755	101008269	+	0.1	NA	Intergenic	(TATATG)n|Simple_repeat|Simple_repeat	232860	NR_107033	102465868		NR_107033	ENSG00000273882	MIR8066	hsa-mir-8066	microRNA 8066	ncRNA
12.1667-2	chr14	104272009	104272187	+	0.1	NA	intron (NR_146612, intron 1 of 2)	L1MC3|LINE|L1	48514	NR_146611	145195	Hs.534297	NR_146611	ENSG00000258913	LINC02691	C14orf144	long intergenic non-protein coding RNA 2691	ncRNA
41.6333-4	chr4	176196493	176197113	+	0.1	NA	Intergenic	Intergenic	-1218	NM_144644	132851	Hs.481235	NM_144644	ENSG00000150628	SPATA4	SPEF1B|TSARG2	spermatogenesis associated 4	protein-coding
41.8667-4	chr9	111643064	111643850	+	0.1	NA	intron (NR_037148, intron 2 of 4)	intron (NR_037148, intron 2 of 4)	12105	NR_037148	548645	Hs.534196	NM_001015882	ENSG00000059769	DNAJC25	bA16L21.2.1	DnaJ heat shock protein family (Hsp40) member C25	protein-coding
31.6333-10	chr6	83170481	83170878	+	0.1	NA	intron (NM_001367286, intron 10 of 11)	intron (NM_001367286, intron 10 of 11)	22586	NR_159812	5238	Hs.661665	NM_015599	ENSG00000013375	PGM3	AGM1|IMD23|PAGM|PGM 3	phosphoglucomutase 3	protein-coding
41.6-2	chr14	67913354	67913836	+	0.1	NA	intron (NM_133509, intron 7 of 10)	Charlie1a|DNA|hAT-Charlie	90003	NM_001321815	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
16.5667-4	chr2	165103585	165104005	+	0.1	NA	intron (NM_006922, intron 21 of 27)	intron (NM_006922, intron 21 of 27)	100255	NM_001081676	6328	Hs.435274	NM_006922	ENSG00000153253	SCN3A	EIEE62|FFEVF4|NAC3|Nav1.3	sodium voltage-gated channel alpha subunit 3	protein-coding
40.5-11	chr6	2078049	2078839	+	0.1	NA	intron (NM_001253846, intron 4 of 10)	L1PA4|LINE|L1	97547	NM_001253846	2762	Hs.144496	NM_001500	ENSG00000112699	GMDS	GMD|SDR3E1	GDP-mannose 4,6-dehydratase	protein-coding
17.6333-4	chr15	97427851	97428137	+	0.1	NA	intron (NR_120324, intron 2 of 4)	intron (NR_120324, intron 2 of 4)	93817	NR_120324	101927286	Hs.611279	NR_120324	ENSG00000259664	LINC02254	-	long intergenic non-protein coding RNA 2254	ncRNA
36.7667-4	chr22	34541963	34542484	+	0.1	NA	Intergenic	L1ME1|LINE|L1	455693	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
34.0667-3	chr13	80431297	80431793	+	0.1	NA	Intergenic	MER50B|LTR|ERV1	-90419	NM_005842	10253	Hs.18676	NM_005842	ENSG00000136158	SPRY2	IGAN3|hSPRY2	sprouty RTK signaling antagonist 2	protein-coding
53.1667	chr5	114591479	114592463	+	0.1	NA	intron (NR_130785, intron 3 of 12)	intron (NR_130785, intron 3 of 12)	15930	NR_134282	101927059	Hs.385789	NR_134282	ENSG00000251542	LINC01957	-	long intergenic non-protein coding RNA 1957	ncRNA
24-10	chr20	61711075	61711397	+	0.1	NA	intron (NM_001252339, intron 1 of 14)	THE1D|LTR|ERVL-MaLR	8512	NR_147702	100128310	Hs.683806	NR_147702	ENSG00000179253	LOC100128310	-	uncharacterized LOC100128310	ncRNA
16.4667-5	chr14	45921523	45921720	+	0.1	NA	Intergenic	Intergenic	-142538	NR_102702	100506412	Hs.207545	NR_102699	ENSG00000258700	LINC00871	-	long intergenic non-protein coding RNA 871	ncRNA
26.4333	chr10	62431267	62431630	+	0.1	NA	intron (NM_199451, intron 3 of 7)	L1MC4a|LINE|L1	-56321	NR_104162	283045		NR_104162		LOC283045	-	uncharacterized LOC283045	ncRNA
23.0667-16	chr8	129791488	129791827	+	0.1	NA	Intergenic	L1MA3|LINE|L1	-5033	NM_031415	56169	Hs.133244	NM_031415	ENSG00000147697	GSDMC	MLZE	gasdermin C	protein-coding
30.8333-6	chr8	55269551	55269955	+	0.1	NA	intron (NM_052898, intron 1 of 2)	intron (NM_052898, intron 1 of 2)	167725	NM_052898	114786	Hs.130197	NM_052898	ENSG00000206579	XKR4	XRG4	XK related 4	protein-coding
15.6667	chr13	51881038	51881219	+	0.1	NA	Intergenic	Intergenic	19159	NM_031290	83446	Hs.120573	NM_031290	ENSG00000123171	CCDC70	-	coiled-coil domain containing 70	protein-coding
30.9333-6	chr3	147757052	147757615	+	0.1	NA	Intergenic	Intergenic	-320826	NR_134937	100507461	Hs.112623	NR_134937	ENSG00000241131	LINC02032	-	long intergenic non-protein coding RNA 2032	ncRNA
11.5333-2	chr21	18376652	18376805	+	0.1	NA	intron (NM_002772, intron 5 of 24)	intron (NM_002772, intron 5 of 24)	27057	NM_002772	5651	Hs.149473	NM_002772	ENSG00000154646	TMPRSS15	ENTK|PRSS7	transmembrane serine protease 15	protein-coding
19.8-4	chr15	81533089	81533307	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-158985	NM_001080532	342125	Hs.253489	NM_181841	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding
29.9333-3	chr12	102577463	102577762	+	0.1	NA	Intergenic	L2|LINE|L2	-97049	NM_000618	3479	Hs.160562	NM_000618	ENSG00000017427	IGF1	IGF|IGF-I|IGFI|MGF	insulin like growth factor 1	protein-coding
8.03333-3	chr2	70909271	70909351	+	0.1	NA	intron (NM_012476, intron 1 of 2)	AluJr|SINE|Alu	8735	NM_012476	25806	Hs.249170	NM_012476	ENSG00000116035	VAX2	DRES93	ventral anterior homeobox 2	protein-coding
29.5667-2	chr12	112128152	112128627	+	0.1	NA	intron (NM_001143906, intron 1 of 11)	intron (NM_001143906, intron 1 of 11)	2829	NM_006700	10906	Hs.5148	NM_006700	ENSG00000135148	TRAFD1	FLN29	TRAF-type zinc finger domain containing 1	protein-coding
28.2667	chr11	117156133	117156568	+	0.1	NA	intron (NR_110269, intron 2 of 7)	MIRb|SINE|MIR	12063	NM_001184747	5049	Hs.728488	NM_002572	ENSG00000168092	PAFAH1B2	HEL-S-303	platelet activating factor acetylhydrolase 1b catalytic subunit 2	protein-coding
13.6667	chr12	4241332	4241507	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-32343	NM_001759	894	Hs.376071	NM_001759	ENSG00000118971	CCND2	KIAK0002|MPPH3	cyclin D2	protein-coding
40.9-2	chr9	77875142	77875684	+	0.1	NA	intron (NM_002072, intron 2 of 6)	intron (NM_002072, intron 2 of 6)	156398	NM_002072	2776	Hs.269782	NM_002072	ENSG00000156052	GNAQ	CMC1|G-ALPHA-q|GAQ|SWS	G protein subunit alpha q	protein-coding
45.8-8	chr5	172965037	172965605	+	0.1	NA	intron (NM_001317982, intron 2 of 3)	L2|LINE|L2	5861	NM_001317982	51121	Hs.546390	NM_016093	ENSG00000037241	RPL26L1	RPL26P1	ribosomal protein L26 like 1	protein-coding
23.5	chr10	120818244	120818674	+	0.1	NA	intron (NR_033850, intron 1 of 2)	MLT1D|LTR|ERVL-MaLR	32720	NR_033850	283089	Hs.568750	NR_033850	ENSG00000227165	WDR11-AS1	-	WDR11 antisense RNA 1	ncRNA
25.4667-9	chr7	6521732	6522293	+	0.1	NA	intron (NM_001145118, intron 4 of 21)	MIRb|SINE|MIR	29424	NM_001145118	392862	Hs.512174	NM_001145118	ENSG00000215045	GRID2IP	DELPHILIN	Grid2 interacting protein	protein-coding
36.3333-7	chr7	55386909	55387638	+	0.1	NA	intron (NM_018697, intron 1 of 8)	MER83A-int|LTR|ERV1	21825	NM_018697	55915	Hs.595384	NM_018697	ENSG00000132434	LANCL2	GPR69B|TASP	LanC like 2	protein-coding
26.0333-4	chr12	25978255	25978540	+	0.1	NA	intron (NM_001164747, intron 1 of 5)	intron (NM_001164747, intron 1 of 5)	4642	NM_001164747	11228	Hs.696433	NM_007211	ENSG00000123094	RASSF8	C12orf2|HOJ1	Ras association domain family member 8	protein-coding
21.2667-3	chr2	209355209	209355522	+	0.1	NA	Intergenic	Intergenic	-68682	NM_001039538	4133	Hs.368281	NM_002374	ENSG00000078018	MAP2	MAP-2|MAP2A|MAP2B|MAP2C	microtubule associated protein 2	protein-coding
15.5667-4	chr17	77872602	77872876	+	0.1	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	11348	NR_028337	400624	Hs.514521	NM_001001685	ENSG00000204283	LINC01973	-	long intergenic non-protein coding RNA 1973	ncRNA
20.9333-12	chr3	117184738	117185069	+	0.1	NA	Intergenic	Intergenic	263472	NR_121607	100506724	Hs.125983	NR_121607	ENSG00000242385	LINC00901	LSAMP-AS4|TCONS_00005428	long intergenic non-protein coding RNA 901	ncRNA
27-11	chr15	78033297	78033797	+	0.1	NA	intron (NM_144572, intron 3 of 12)	L1ME1|LINE|L1	-39322	NR_026998	91450	Hs.406766	NR_026998		LOC91450	-	uncharacterized LOC91450	ncRNA
18.9667-13	chr9	99024900	99025249	+	0.1	NA	intron (NM_001855, intron 15 of 41)	intron (NM_001855, intron 15 of 41)	-80039	NM_004612	7046	Hs.494622	NM_004612	ENSG00000106799	TGFBR1	AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I	transforming growth factor beta receptor 1	protein-coding
24.4-6	chr12	27286362	27286843	+	0.1	NA	intron (NM_015000, intron 1 of 13)	L1ME4c|LINE|L1	42316	NM_015000	23012	Hs.184523	NM_015000	ENSG00000211455	STK38L	NDR2	serine/threonine kinase 38 like	protein-coding
14.1667-6	chr3	24300270	24300418	+	0.1	NA	intron (NM_001354710, intron 2 of 10)	intron (NM_001354710, intron 2 of 10)	149020	NR_121667	101927854	Hs.570625	NR_121667		LOC101927854	-	uncharacterized LOC101927854	ncRNA
27.7667-6	chr8	99847917	99848434	+	0.1	NA	intron (NM_017890, intron 54 of 61)	intron (NM_017890, intron 54 of 61)	45532	NM_004374	1345	Hs.351875	NM_004374	ENSG00000164919	COX6C	-	cytochrome c oxidase subunit 6C	protein-coding
19.2667-8	chr4	85718361	85718609	+	0.1	NA	intron (NM_001025616, intron 2 of 9)	L1ME4a|LINE|L1	-3983	NR_039656	100616349		NR_039656	ENSG00000266421	MIR4451	mir-4451	microRNA 4451	ncRNA
30.9-10	chr6	19739820	19740233	+	0.1	NA	intron (NR_134651, intron 3 of 3)	intron (NR_134651, intron 3 of 3)	64733	NR_134651	100506885	Hs.346489	NR_134649	ENSG00000228412	LOC100506885	-	uncharacterized LOC100506885	ncRNA
27.0333	chr1	84848435	84848997	+	0.1	NA	intron (NM_012152, intron 2 of 2)	intron (NM_012152, intron 2 of 2)	44490	NM_012152	23566	Hs.527909	NM_012152	ENSG00000171517	LPAR3	EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3	lysophosphatidic acid receptor 3	protein-coding
21.0333-12	chr4	81573518	81573858	+	0.1	NA	Intergenic	MamGypsy2-I|LTR|Gypsy	-101781	NM_001300736	153020	Hs.591696	NM_152545	ENSG00000138670	RASGEF1B	GPIG4	RasGEF domain family member 1B	protein-coding
29-7	chr2	102578105	102578516	+	0.1	NA	Intergenic	L1M3de|LINE|L1	-41243	NM_003048	6549	Hs.250083	NM_003048	ENSG00000115616	SLC9A2	NHE2	solute carrier family 9 member A2	protein-coding
17.7-14	chr5	30090414	30090834	+	0.1	NA	Intergenic	Intergenic	210064	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
24.5333-17	chr9	80016939	80017278	+	0.1	NA	intron (NR_121212, intron 3 of 4)	L1MEg|LINE|L1	42085	NR_121212	101927477	Hs.571630	NR_121212		LINC01507	XLOC_000303	long intergenic non-protein coding RNA 1507	ncRNA
19.8-6	chr16	52987681	52987930	+	0.1	NA	Intergenic	Intergenic	65068	NR_147075	105371267	Hs.147562	NR_136518	ENSG00000277639	LOC105371267	PR-lncRNA-1	p53-regulated lncRNA 1	ncRNA
23.6667-11	chr8	89269914	89270479	+	0.1	NA	Intergenic	Intergenic	487515	NR_125822	101929709	Hs.651324	NR_125822	ENSG00000251136	LOC101929709	-	uncharacterized LOC101929709	ncRNA
18.2333-5	chr13	25901582	25901950	+	0.1	NA	intron (NM_016529, intron 33 of 36)	intron (NM_016529, intron 33 of 36)	149294	NM_001007538	387914	Hs.433791	NM_001007538	ENSG00000180730	SHISA2	C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa	shisa family member 2	protein-coding
34.0667-2	chr10	86062984	86063549	+	0.1	NA	intron (NM_017551, intron 4 of 15)	intron (NM_017551, intron 4 of 15)	201522	NR_029907	442911		NR_029907	ENSG00000199104	MIR346	MIRN346|hsa-mir-346|miR-346|miRNA346	microRNA 346	ncRNA
21.0333-17	chr8	38303824	38304266	+	0.1	NA	intron (NM_023034, intron 14 of 23)	intron (NM_023034, intron 14 of 23)	-34813	NM_001354454	84513	Hs.567619	NM_032483	ENSG00000147535	PLPP5	DPPL1|HTPAP|PPAPDC1B	phospholipid phosphatase 5	protein-coding
9.73333	chr1	63820468	63820635	+	0.1	NA	intron (NM_005012, intron 1 of 8)	intron (NM_005012, intron 1 of 8)	46534	NM_005012	4919	Hs.128753	NM_005012	ENSG00000185483	ROR1	NTRKR1|dJ537F10.1	receptor tyrosine kinase like orphan receptor 1	protein-coding
25.3667-2	chr22	37074120	37074437	+	0.1	NA	intron (NM_153609, intron 12 of 17)	intron (NM_153609, intron 12 of 17)	22542	NM_001282684	79734	Hs.517597	NM_024681	ENSG00000100379	KCTD17	-	potassium channel tetramerization domain containing 17	protein-coding
32.7-8	chr4	34289182	34289690	+	0.1	NA	Intergenic	Intergenic	-19689	NR_147183	105374394	Hs.570782	NR_147183	ENSG00000248685	LINC02484	-	long intergenic non-protein coding RNA 2484	ncRNA
38.1333-5	chr6	68683212	68683904	+	0.1	NA	intron (NM_001704, intron 3 of 31)	L1ME4a|LINE|L1	48276	NM_001704	577	Hs.13261	NM_001704	ENSG00000135298	ADGRB3	BAI3	adhesion G protein-coupled receptor B3	protein-coding
27.6333-6	chr2	33889635	33890061	+	0.1	NA	intron (NR_126403, intron 2 of 5)	MIRb|SINE|MIR	-161631	NR_003143	151325	Hs.528847	NM_207329	ENSG00000239649	MYADML	-	myeloid associated differentiation marker like (pseudogene)	pseudo
36.8667-4	chr12	72025868	72026449	+	0.1	NA	intron (NM_173353, intron 9 of 10)	intron (NM_173353, intron 9 of 10)	87313	NM_173353	121278	Hs.736576	NM_173353	ENSG00000139287	TPH2	ADHD7|NTPH	tryptophan hydroxylase 2	protein-coding
20.5333-8	chr2	207788342	207788763	+	0.1	NA	Intergenic	MER33|DNA|hAT-Charlie	-18646	NM_003468	7855	Hs.17631	NM_003468	ENSG00000163251	FZD5	C2orf31|HFZ5	frizzled class receptor 5	protein-coding
29.8333-7	chr6	53984621	53984981	+	0.1	NA	intron (NR_125842, intron 2 of 3)	intron (NR_125842, intron 2 of 3)	-14089	NR_046832	100874282	Hs.571169	NR_046832	ENSG00000236996	MLIP-IT1	-	MLIP intronic transcript 1	ncRNA
30.8667-6	chr6	161932336	161932802	+	0.1	NA	intron (NM_004562, intron 6 of 11)	LTR37-int|LTR|ERV1	461592	NR_134594	105378098	Hs.691066	NR_134593		LOC105378098	-	uncharacterized LOC105378098	ncRNA
21.6333-9	chr6	56600706	56601246	+	0.1	NA	intron (NM_001144770, intron 36 of 94)	MIR|SINE|MIR	41913	NM_015548	667	Hs.604915	NM_001723	ENSG00000151914	DST	BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2	dystonin	protein-coding
15.8667-12	chrX	31678164	31678322	+	0.1	NA	intron (NM_000109, intron 53 of 78)	intron (NM_000109, intron 53 of 78)	-169945	NM_004014	1756	Hs.495912	NM_000109	ENSG00000198947	DMD	BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85	dystrophin	protein-coding
14.8333-5	chr15	93071783	93071987	+	0.1	NA	intron (NM_001166286, intron 1 of 2)	intron (NM_001166286, intron 1 of 2)	1271	NM_001166286	56963	Hs.271277	NM_020211	ENSG00000182175	RGMA	RGM	repulsive guidance molecule BMP co-receptor a	protein-coding
12.2-9	chr7	154939413	154939628	+	0.1	NA	intron (NR_024476, intron 2 of 7)	intron (NR_024476, intron 2 of 7)	11003	NR_024476	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA
27.8667-4	chr16	57976870	57977405	+	0.1	NA	intron (NM_199456, intron 1 of 7)	AluSx1|SINE|Alu	702	NM_199456	374739	Hs.132976	NM_199046	ENSG00000159648	TEPP	-	testis, prostate and placenta expressed	protein-coding
10.3667-9	chr9	127092445	127092595	+	0.1	NA	intron (NM_012098, intron 3 of 4)	intron (NM_012098, intron 3 of 4)	30115	NM_012098	23452	Hs.653262	NM_012098	ENSG00000136859	ANGPTL2	ARP2|HARP	angiopoietin like 2	protein-coding
22.2-4	chr12	73325488	73325983	+	0.1	NA	Intergenic	L1PA13|LINE|L1	166545	NR_110130	101928137	Hs.694666	NR_110130	ENSG00000258123	LINC02444	-	long intergenic non-protein coding RNA 2444	ncRNA
21.1-10	chr6	52630541	52630893	+	0.1	NA	Intergenic	MER5B|DNA|hAT-Charlie	-33684	NR_024403	730101	Hs.7921	NR_024403	ENSG00000216775	LOC730101	-	uncharacterized LOC730101	ncRNA
31.0667-3	chr10	13890337	13890697	+	0.1	NA	intron (NM_018027, intron 2 of 24)	intron (NM_018027, intron 2 of 24)	81379	NM_001318337	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding
22.2667-5	chr2	222759	223102	+	0.1	NA	intron (NM_001282682, intron 10 of 10)	intron (NM_001282682, intron 10 of 10)	33410	NM_001282687	26751	Hs.515951	NM_015677	ENSG00000035115	SH3YL1	RAY	SH3 and SYLF domain containing 1	protein-coding
8.16666	chr1	2833496	2833620	+	0.1	NA	Intergenic	Intergenic	-32690	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding
13.9333-5	chr2	103243589	103243832	+	0.1	NA	Intergenic	Intergenic	-259281	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
19.7-15	chr9	95973262	95973512	+	0.1	NA	intron (NM_020207, intron 16 of 18)	L1ME3B|LINE|L1	48424	NR_024129	100188953	Hs.434310	NR_024129	ENSG00000225194	LINC00092	NCRNA00092	long intergenic non-protein coding RNA 92	ncRNA
35.2667-3	chr20	30152584	30153210	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	133640	NR_145432	400841	Hs.516959	NM_207470		LINC01597	-	long intergenic non-protein coding RNA 1597	ncRNA
26.5333-10	chr4	33706763	33707349	+	0.1	NA	Intergenic	L1MB1|LINE|L1	332837	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
30-10	chr2	197105011	197105558	+	0.1	NA	intron (NM_153697, intron 9 of 9)	AluSq|SINE|Alu	-92707	NR_135584	101927596		NR_135584	ENSG00000231621	LOC101927596	-	uncharacterized LOC101927596	ncRNA
16.0667	chr1	172252950	172253146	+	0.1	NA	intron (NR_146559, intron 15 of 20)	intron (NR_146559, intron 15 of 20)	-108213	NR_038397	100628315	Hs.584880	NR_038397		DNM3OS	DNM3-AS1|MIR199A2HG	DNM3 opposite strand/antisense RNA	ncRNA
41.8333-2	chr3	87099735	87100563	+	0.1	NA	intron (NR_104153, intron 1 of 2)	intron (NR_104153, intron 1 of 2)	10869	NR_047469	100846978	Hs.570649	NR_047469	ENSG00000281392	LINC00506	-	long intergenic non-protein coding RNA 506	ncRNA
11.4667-2	chr10	25426980	25427206	+	0.1	NA	intron (NM_020752, intron 4 of 10)	intron (NM_020752, intron 4 of 10)	-224619	NR_108067	101929052	Hs.128298	NR_108067	ENSG00000280809	LINC00836	-	long intergenic non-protein coding RNA 836	ncRNA
26.7333-6	chr20	61652796	61653063	+	0.1	NA	intron (NM_001252339, intron 1 of 14)	(ATTT)n|Simple_repeat|Simple_repeat	53168	NM_001252339	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding
14.6-3	chr12	2620188	2620421	+	0.1	NA	intron (NM_001129840, intron 29 of 46)	MIR|SINE|MIR	51916	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA
15.3-6	chr4	107045873	107046072	+	0.1	NA	Intergenic	L1M8|LINE|L1	-9659	NM_014421	27123	Hs.211869	NM_014421	ENSG00000155011	DKK2	DKK-2	dickkopf WNT signaling pathway inhibitor 2	protein-coding
23.9667-2	chr10	53409884	53410124	+	0.1	NA	Intergenic	Intergenic	-638304	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
18.4333-3	chr14	82672216	82672518	+	0.1	NA	intron (NR_146650, intron 2 of 5)	intron (NR_146650, intron 2 of 5)	29735	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
25.0333-7	chr20	43622441	43622691	+	0.1	NA	intron (NM_001323578, intron 9 of 13)	AluY|SINE|Alu	31629	NM_001303459	51098	Hs.444332	NM_016004	ENSG00000101052	IFT52	C20orf9|CGI-53|NGD2|NGD5	intraflagellar transport 52	protein-coding
27.3-4	chr2	68610196	68610694	+	0.1	NA	Intergenic	AluY|SINE|Alu	-33143	NM_138964	10887	Hs.683430	NM_138964	ENSG00000169618	PROKR1	GPR73|GPR73a|PK-R1|PKR1|ZAQ	prokineticin receptor 1	protein-coding
41.3333-2	chr17	81849793	81850444	+	0.1	NA	intron (NM_000918, intron 4 of 10)	AluSq2|SINE|Alu	10417	NM_000918	5034	Hs.464336	NM_000918	ENSG00000185624	P4HB	CLCRP1|DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB	prolyl 4-hydroxylase subunit beta	protein-coding
15.5333	chr10	24998018	24998279	+	0.1	NA	intron (NM_001270383, intron 2 of 5)	LTR89|LTR|ERVL?	18010	NR_072993	219670	Hs.534486	NM_145010	ENSG00000151023	ENKUR	C10orf63|CFAP106	enkurin, TRPC channel interacting protein	protein-coding
19.4-15	chr7	100885617	100885974	+	0.1	NA	intron (NM_015908, intron 11 of 19)	intron (NM_015908, intron 11 of 19)	3920	NM_001015072	402682	Hs.534845	NM_001015072	ENSG00000176125	UFSP1	UFSP	UFM1 specific peptidase 1 (inactive)	protein-coding
23.0333-9	chr3	167202898	167203274	+	0.1	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	177197	NM_001199202	79740	Hs.478143	NM_024687	ENSG00000169064	ZBBX	-	zinc finger B-box domain containing	protein-coding
9.36666-3	chr2	80054800	80054962	+	0.1	NA	intron (NM_001282598, intron 7 of 17)	intron (NM_001282598, intron 7 of 17)	-188298	NR_107047	102465877		NR_107047	ENSG00000276917	MIR8080	hsa-mir-8080	microRNA 8080	ncRNA
34.3-5	chr4	132751735	132752163	+	0.1	NA	Intergenic	Intergenic	160860	NR_126401	104355285	Hs.123483	NR_126401	ENSG00000251398	LINC01256	TCONS_l2_00021715	long intergenic non-protein coding RNA 1256	ncRNA
11.7667-4	chr13	45372565	45372747	+	0.1	NA	intron (NR_024458, intron 4 of 10)	intron (NR_024458, intron 4 of 10)	31311	NR_024458	100190939	Hs.375766	NR_024458		TPT1-AS1	-	TPT1 antisense RNA 1	ncRNA
31.8667-4	chr12	20289964	20290484	+	0.1	NA	Intergenic	L1MC1|LINE|L1	-79021	NM_000921	5139	Hs.386791	NM_000921	ENSG00000172572	PDE3A	CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB	phosphodiesterase 3A	protein-coding
41.4667-2	chr2	51929511	51930362	+	0.1	NA	intron (NR_135237, intron 7 of 10)	MIR3|SINE|MIR	-440712	NR_135239	105374596		NR_135239	ENSG00000225444	LINC01867	-	long intergenic non-protein coding RNA 1867	ncRNA
15.8333-5	chr11	16182760	16182930	+	0.1	NA	intron (NM_033326, intron 6 of 15)	intron (NM_033326, intron 6 of 15)	173701	NM_001367873	55553	Hs.368226	NM_017508	ENSG00000110693	SOX6	HSSOX6|SOXD	SRY-box transcription factor 6	protein-coding
24.6-16	chrX	87542132	87542671	+	0.1	NA	intron (NM_057162, intron 1 of 10)	THE1D-int|LTR|ERVL-MaLR	24599	NM_057162	56062	Hs.49075	NM_019117	ENSG00000102271	KLHL4	DKELCHL|KHL4	kelch like family member 4	protein-coding
14.5333-5	chr2	99658037	99658301	+	0.1	NA	intron (NM_001025108, intron 11 of 23)	intron (NM_001025108, intron 11 of 23)	-168152	NR_135650	51455	Hs.443077	NM_016316	ENSG00000135945	REV1	AIBP80|REV1L	REV1 DNA directed polymerase	protein-coding
14.0333-4	chr12	1325531	1325805	+	0.1	NA	intron (NR_027948, intron 15 of 19)	intron (NR_027948, intron 15 of 19)	-174823	NR_028415	100292680	Hs.391695	NR_028415	ENSG00000249628	LINC00942	-	long intergenic non-protein coding RNA 942	ncRNA
33.4-8	chr7	51062268	51062739	+	0.1	NA	intron (NM_015198, intron 7 of 12)	intron (NM_015198, intron 7 of 12)	254306	NM_001287438	23242	Hs.99141	NM_015198	ENSG00000106078	COBL	-	cordon-bleu WH2 repeat protein	protein-coding
29.6667-4	chr11	110218593	110219150	+	0.1	NA	intron (NM_001260493, intron 14 of 15)	L2c|LINE|L2	77841	NM_001260493	5962	Hs.263671	NM_002906	ENSG00000137710	RDX	DFNB24	radixin	protein-coding
17.1333-2	chr11	95412918	95413190	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-180579	NM_001271594	143686	Hs.120633	NM_144665	ENSG00000149212	SESN3	SEST3	sestrin 3	protein-coding
34.5-5	chr2	64595074	64595544	+	0.1	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	-12003	NR_034023	339807	Hs.434736	NR_034023	ENSG00000233694	LINC02579	-	long intergenic non-protein coding RNA 2579	ncRNA
32.3333-6	chr22	25868664	25869102	+	0.1	NA	intron (NM_001318245, intron 22 of 43)	intron (NM_001318245, intron 22 of 43)	126695	NM_001318245	84700	Hs.417959	NM_032608	ENSG00000133454	MYO18B	KFS4	myosin XVIIIB	protein-coding
33.6667	chr1	43486455	43486886	+	0.1	NA	Intergenic	L1MB7|LINE|L1	-32681	NM_001190880	81888	Hs.709864	NM_031207	ENSG00000178922	HYI	HT036	hydroxypyruvate isomerase (putative)	protein-coding
11.5333-3	chr21	26273709	26273867	+	0.1	NA	Intergenic	L1MA7|LINE|L1	-102660	NM_001136131	351	Hs.434980	NM_000484	ENSG00000142192	APP	AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4	amyloid beta precursor protein	protein-coding
24.0667	chr1	247400287	247400604	+	0.1	NA	Intergenic	HAL1|LINE|L1	-15711	NM_001127461	114548	Hs.159483	NM_004895	ENSG00000162711	NLRP3	AGTAVPRL|AII|AVP|C1orf7|CIAS1|CLR1.1|DFNA34|FCAS|FCAS1|FCU|KEFH|MWS|NALP3|PYPAF1	NLR family pyrin domain containing 3	protein-coding
44.2-3	chr7	38523974	38524634	+	0.1	NA	intron (NM_001635, intron 2 of 20)	L1MC4|LINE|L1	107069	NM_001635	273	Hs.592182	NM_001635	ENSG00000078053	AMPH	AMPH1	amphiphysin	protein-coding
15.9667-11	chr5	153752584	153752819	+	0.1	NA	intron (NM_000827, intron 11 of 15)	L2b|LINE|L2	146286	NR_146729	105378238	Hs.590229	NR_146729	ENSG00000251183	LINC01861	-	long intergenic non-protein coding RNA 1861	ncRNA
16.7333-5	chr14	47587572	47587905	+	0.1	NA	intron (NM_001113498, intron 1 of 16)	L1MB7|LINE|L1	87216	NM_001113498	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
24.9667-11	chr6	51672668	51672932	+	0.1	NA	intron (NM_138694, intron 60 of 66)	L2|LINE|L2	50930	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
26.8333-3	chr12	12131948	12132390	+	0.1	NA	intron (NM_002336, intron 17 of 22).2	intron (NM_002336, intron 17 of 22).2	20217	NR_036263	100422872		NR_036263	ENSG00000283429	MIR1244-3	-	microRNA 1244-3	ncRNA
16.9333-16	chr8	88543443	88543778	+	0.1	NA	Intergenic	L2c|LINE|L2	-216127	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
38.4-7	chr21	45450575	45451180	+	0.1	NA	intron (NM_130445, intron 2 of 42)	intron (NM_130445, intron 2 of 42)	-4645	NM_030582	80781	Hs.517356	NM_030582	ENSG00000182871	COL18A1	KNO|KNO1|KS	collagen type XVIII alpha 1 chain	protein-coding
40.0333-3	chr4	88733748	88734188	+	0.1	NA	intron (NM_001265579, intron 14 of 16)	L3|LINE|CR1	24179	NR_002806	285512	Hs.744957	NR_002806	ENSG00000248019	FAM13A-AS1	FAM13A1OS|FAM13AOS|NCRNA00039	FAM13A antisense RNA 1	ncRNA
25.8-16	chr2	172813187	172813790	+	0.1	NA	intron (NM_007023, intron 3 of 30)	intron (NM_007023, intron 3 of 30)	-8099	NM_001100397	11069	Hs.470646	NM_007023	ENSG00000091428	RAPGEF4	CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496	Rap guanine nucleotide exchange factor 4	protein-coding
23.0333-5	chr14	21469040	21469550	+	0.1	NA	intron (NM_001163380, intron 2 of 6)	intron (NM_001163380, intron 2 of 6)	7379	NM_001163380	84932	Hs.22399	NM_032846	ENSG00000129472	RAB2B	-	RAB2B, member RAS oncogene family	protein-coding
30.7667-15	chr9	122638359	122638775	+	0.1	NA	Intergenic	Intergenic	-9032	NM_001004450	347169	Hs.553710	NM_001004450	ENSG00000280094	OR1B1	OR9-26|OR9-B	olfactory receptor family 1 subfamily B member 1 (gene/pseudogene)	protein-coding
25.7-13	chr7	49132938	49133363	+	0.1	NA	Intergenic	Intergenic	208603	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
19-11	chr2	128877443	128877808	+	0.1	NA	Intergenic	Intergenic	13025	NR_110278	101927881	Hs.570247	NR_110278		LOC101927881	-	uncharacterized LOC101927881	ncRNA
18.9-2	chr1	160997533	160997863	+	0.1	NA	3' UTR (NM_016946, exon 10 of 10)	3' UTR (NM_016946, exon 10 of 10)	23454	NM_001348091	50848	Hs.517293	NM_016946	ENSG00000158769	F11R	CD321|JAM|JAM1|JAMA|JCAM|KAT|PAM-1	F11 receptor	protein-coding
13.3667-8	chr2	18343515	18343673	+	0.1	NA	Intergenic	L1MEd|LINE|L1	217059	NM_020905	57665	Hs.120319	NM_020905	ENSG00000240857	RDH14	PAN2|SDR7C4	retinol dehydrogenase 14	protein-coding
16.7-15	chr4	176865127	176865514	+	0.1	NA	Intergenic	Intergenic	-10382	NR_149104	105377556		NR_149104	ENSG00000250263	LINC02509	-	long intergenic non-protein coding RNA 2509	ncRNA
8.53333-5	chr8	107352391	107352560	+	0.1	NA	intron (NM_001199859, intron 1 of 8)	intron (NM_001199859, intron 1 of 8)	-15960	NM_001314051	284	Hs.369675	NM_001146	ENSG00000154188	ANGPT1	AGP1|AGPT|ANG1	angiopoietin 1	protein-coding
17.7667-10	chr7	90506804	90507176	+	0.1	NA	intron (NM_001365443, intron 6 of 6)	intron (NM_001365443, intron 6 of 6)	37351	NM_001365443	102723899	Hs.731917	NM_001365443		LOC102723899	-	uncharacterized LOC102723899	protein-coding
24.7-14	chr7	1498276	1498680	+	0.1	NA	exon (NM_001080453, exon 10 of 48)	exon (NM_001080453, exon 10 of 48)	5911	NM_001080453	26173	Hs.532188	NM_001080453	ENSG00000164880	INTS1	INT1|NET28	integrator complex subunit 1	protein-coding
27.7333-6	chr16	48284776	48285336	+	0.1	NA	intron (NM_031490, intron 8 of 14)	L1M4|LINE|L1	-37517	NM_001370497	85320	Hs.652267	NM_032583	ENSG00000121270	ABCC11	EWWD|MRP8|WW	ATP binding cassette subfamily C member 11	protein-coding
31.4-2	chr10	80194634	80194962	+	0.1	NA	intron (NM_001278408, intron 1 of 16)	MER102b|DNA|hAT-Charlie	9693	NM_001278408	311	Hs.530291	NM_001157	ENSG00000122359	ANXA11	ALS23|ANX11|CAP-50|CAP50	annexin A11	protein-coding
14.8-3	chr10	120002156	120002479	+	0.1	NA	Intergenic	Intergenic	43804	NR_039830	100616322		NR_039830	ENSG00000265370	MIR4682	-	microRNA 4682	ncRNA
15.0667-2	chr10	50929508	50929716	+	0.1	NA	Intergenic	Intergenic	-43937	NM_138933	29974	Hs.282795	NM_014576	ENSG00000148584	A1CF	ACF|ACF64|ACF65|APOBEC1CF|ASP	APOBEC1 complementation factor	protein-coding
23.1-5	chr16	7205734	7206141	+	0.1	NA	intron (NM_018723, intron 4 of 15)	intron (NM_018723, intron 4 of 15)	-126908	NM_145892	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
29.1333-4	chr2	48991814	48992412	+	0.1	NA	intron (NM_000145, intron 4 of 9)	intron (NM_000145, intron 4 of 9)	-67490	NR_107011	102465854		NR_107011	ENSG00000212036	MIR548BA	hsa-mir-548ba	microRNA 548ba	ncRNA
25.0333-3	chr11	65674424	65675003	+	0.1	NA	Intergenic	MLT2B2|LTR|ERVL	-11741	NM_001243985	5970	Hs.502875	NM_021975	ENSG00000173039	RELA	CMCU|NFKB3|p65	RELA proto-oncogene, NF-kB subunit	protein-coding
22.9-8	chr19	45842679	45843216	+	0.1	NA	intron (NM_004819, intron 8 of 26)	MLT1K|LTR|ERVL-MaLR	20200	NM_004819	8189	Hs.515475	NM_004819	ENSG00000125755	SYMPK	SPK|SYM	symplekin	protein-coding
22.1667-8	chr8	3335848	3336310	+	0.1	NA	intron (NM_033225, intron 23 of 69)	intron (NM_033225, intron 23 of 69)	-607628	NR_125426	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA
29.2333-7	chr6	23521570	23522068	+	0.1	NA	Intergenic	Intergenic	-604396	NM_080723	140767	Hs.726270	NM_080723	ENSG00000152954	NRSN1	VMP|p24	neurensin 1	protein-coding
20.9667-10	chr3	43374185	43374641	+	0.1	NA	intron (NM_001204831, intron 11 of 12)	MIR|SINE|MIR	-22451	NR_046757	100873954	Hs.600984	NR_046757		SNRK-AS1	-	SNRK antisense RNA 1	ncRNA
12.3333-4	chr12	9114402	9114558	+	0.1	NA	intron (NM_000014, intron 1 of 35)	Charlie2a|DNA|hAT-Charlie	1749	NM_000014	2	Hs.88556	NM_000014	ENSG00000175899	A2M	A2MD|CPAMD5|FWP007|S863-7	alpha-2-macroglobulin	protein-coding
26.7667-12	chr6	54232023	54232435	+	0.1	NA	intron (NM_138569, intron 11 of 12)	intron (NM_138569, intron 11 of 12)	-76212	NM_014464	27283	Hs.127011	NM_014464	ENSG00000137251	TINAG	TIN-AG	tubulointerstitial nephritis antigen	protein-coding
37.7667	chr1	197687322	197687923	+	0.1	NA	intron (NR_125340, intron 3 of 19)	L1MB1|LINE|L1	87858	NM_001195216	163486	Hs.125056	NM_019049	ENSG00000213047	DENND1B	C1ORF18|C1orf218|FAM31B	DENN domain containing 1B	protein-coding
5.2-4	chr6	168085527	168085584	+	0.1	NA	Intergenic	Intergenic	-3998	NR_110312	79981	Hs.266746	NM_024919	ENSG00000153303	FRMD1	bA164L23.1	FERM domain containing 1	protein-coding
16.8-4	chr2	134433939	134434183	+	0.1	NA	intron (NM_001371457, intron 15 of 16)	intron (NM_001371457, intron 15 of 16)	179989	NM_002410	4249	Hs.4988	NM_002410	ENSG00000152127	MGAT5	GNT-V|GNT-VA|MGAT5A	alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase	protein-coding
16.9-2	chr10	51850378	51850615	+	0.1	NA	intron (NM_001098512, intron 4 of 17)	(TA)n|Simple_repeat|Simple_repeat	-150901	NM_015235	23283	Hs.591358	NM_015235	ENSG00000177613	CSTF2T	CstF-64T	cleavage stimulation factor subunit 2 tau variant	protein-coding
17.1333-17	chr4	92482763	92483155	+	0.1	NA	intron (NM_001286838, intron 1 of 14)	intron (NM_001286838, intron 1 of 14)	178560	NM_001286838	2895	Hs.162727	NM_001510	ENSG00000152208	GRID2	GluD2|SCAR18	glutamate ionotropic receptor delta type subunit 2	protein-coding
43.0333-5	chr6	34470401	34470836	+	0.1	NA	intron (NM_020804, intron 1 of 9)	AluJr|SINE|Alu	4542	NM_020804	29993	Hs.520087	NM_020804	ENSG00000124507	PACSIN1	SDPI	protein kinase C and casein kinase substrate in neurons 1	protein-coding
33.6667-9	chr5	118584134	118584644	+	0.1	NA	Intergenic	Charlie2a|DNA|hAT-Charlie	-11799	NR_104998	102467225	Hs.582523	NR_104998	ENSG00000249128	LINC02215	-	long intergenic non-protein coding RNA 2215	ncRNA
26.7-5	chr19	45539901	45540486	+	0.1	NA	intron (NM_001017989, intron 1 of 1)	AluSc|SINE|Alu	32714	NM_003370	7408	Hs.515469	NM_003370	ENSG00000125753	VASP	-	vasodilator stimulated phosphoprotein	protein-coding
36.5333	chr10	9425119	9425596	+	0.1	NA	Intergenic	MER74A|LTR|ERVL	-129764	NR_120635	101928272	Hs.650697	NR_120635		LOC101928272	-	uncharacterized LOC101928272	ncRNA
35-10	chr5	105665235	105665784	+	0.1	NA	Intergenic	L1MA1|LINE|L1	566035	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
9.36667-5	chr4	74062334	74062480	+	0.1	NA	Intergenic	MamRep1527|LTR|LTR	-7008	NR_026769	10895	Hs.3134	NM_006692	ENSG00000248848	PPBPP2	PPBPL2|SPBPBP	pro-platelet basic protein pseudogene 2	pseudo
22.1667-6	chr4	63722248	63722731	+	0.1	NA	Intergenic	HSMAR2|DNA|TcMar-Mariner	686961	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
18.3667-6	chr19	17540749	17540959	+	0.1	NA	intron (NM_001098524, intron 10 of 15)	AluJo|SINE|Alu	13585	NM_001321828	199786	Hs.434133	NM_173544	ENSG00000167483	NIBAN3	BCNP1|FAM129C	niban apoptosis regulator 3	protein-coding
26.1-4	chr11	107507566	107508095	+	0.1	NA	intron (NM_138775, intron 11 of 11)	intron (NM_138775, intron 11 of 11)	-49984	NM_152434	143884	Hs.212140	NM_152434	ENSG00000152404	CWF19L2	-	CWF19 like cell cycle control factor 2	protein-coding
15.0333-8	chr17	31337082	31337332	+	0.1	NA	intron (NM_001042492, intron 42 of 57)	intron (NM_001042492, intron 42 of 57)	-15585	NM_014210	2123	Hs.591198	NM_014210	ENSG00000126860	EVI2A	EVDA|EVI-2A|EVI2	ecotropic viral integration site 2A	protein-coding
16.9667-5	chr2	74983820	74984104	+	0.1	NA	Intergenic	MamRep605|LTR?|LTR?	25319	NM_019896	56655	Hs.469060	NM_019896	ENSG00000115350	POLE4	YHHQ1|p12	DNA polymerase epsilon 4, accessory subunit	protein-coding
22.6333-7	chr15	25863486	25863784	+	0.1	NA	promoter-TSS (NM_024490)	promoter-TSS (NM_024490)	-433	NM_024490	57194	Hs.638517	NM_024490	ENSG00000206190	ATP10A	ATP10C|ATPVA|ATPVC	ATPase phospholipid transporting 10A (putative)	protein-coding
17.9-6	chr17	17994497	17994765	+	0.1	NA	intron (NM_031294, intron 7 of 13)	intron (NM_031294, intron 7 of 13)	21769	NM_001130092	83450	Hs.579264	NM_031294	ENSG00000171962	DRC3	CFAP134|LRRC48	dynein regulatory complex subunit 3	protein-coding
32.3667-4	chr22	29712536	29713014	+	0.1	NA	Intergenic	Intergenic	-7228	NM_182527	164633	Hs.643608	NM_182527	ENSG00000100314	CABP7	CALN2	calcium binding protein 7	protein-coding
19.0333-8	chr2	186382098	186382434	+	0.1	NA	Intergenic	L1M7|LINE|L1	-103994	NM_018471	55854	Hs.741180	NM_018471	ENSG00000065548	ZC3H15	HT010|LEREPO4|MSTP012	zinc finger CCCH-type containing 15	protein-coding
22.2-11	chr3	52733589	52733864	+	0.1	NA	intron (NM_003157, intron 15 of 15)	intron (NM_003157, intron 15 of 15)	27620	NM_014041	28972	Hs.11125	NM_014041	ENSG00000114902	SPCS1	HSPC033|SPC1|SPC12|YJR010C-A	signal peptidase complex subunit 1	protein-coding
21.9333-4	chr1	228238914	228239375	+	0.1	NA	intron (NM_052843, intron 9 of 80)	(CA)n|Simple_repeat|Simple_repeat	-25480	NR_073154	574407	Hs.650039	NM_001025495	ENSG00000162913	OBSCN-AS1	C1orf145	OBSCN antisense RNA 1	ncRNA
63.6667	chr10	83858965	83860057	+	0.1	NA	Intergenic	L1ME1|LINE|L1	-182422	NR_134317	105378397	Hs.147725	NR_134317		LINC02650	-	long intergenic non-protein coding RNA 2650	ncRNA
41.6333-5	chrX	57067619	57068360	+	0.1	NA	Intergenic	Intergenic	53557	NM_001006681	474343	Hs.460717	NM_001006681	ENSG00000186787	SPIN2B	SPIN-2|SPIN-2B|SPIN2_duplicate|TDRD26|dJ323P24.2	spindlin family member 2B	protein-coding
37.3333	chr11	104314085	104314627	+	0.1	NA	Intergenic	MamRep1527|LTR|LTR	-150209	NM_033135	80310	Hs.352298	NM_025208	ENSG00000170962	PDGFD	IEGF|MSTP036|SCDGF-B|SCDGFB	platelet derived growth factor D	protein-coding
27.4667-7	chr17	30338853	30339330	+	0.1	NA	Intergenic	MER53|DNA|hAT	-5034	NM_206832	388364	Hs.371005	NM_206832	ENSG00000182271	TMIGD1	TMIGD|UNQ9372	transmembrane and immunoglobulin domain containing 1	protein-coding
20.7667	chr10	14141610	14141947	+	0.1	NA	intron (NR_134578, intron 2 of 3)	intron (NR_134578, intron 2 of 3)	67494	NR_120638	101928453	Hs.650212	NR_120638		LOC101928453	-	uncharacterized LOC101928453	ncRNA
14.6667-6	chr8	37792259	37792428	+	0.1	NA	Intergenic	MIR|SINE|MIR	-4540	NM_032777	25960	Hs.274136	NM_032777	ENSG00000020181	ADGRA2	GPR124|TEM5	adhesion G protein-coupled receptor A2	protein-coding
34.6-6	chr2	81814710	81815101	+	0.1	NA	Intergenic	Intergenic	-347959	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
13.6667-3	chr14	26846591	26846766	+	0.1	NA	Intergenic	LTR33C|LTR|ERVL	-24558	NR_110033	101927062		NR_110033	ENSG00000257845	LINC02294	-	long intergenic non-protein coding RNA 2294	ncRNA
22.6333-15	chr6	26248149	26248581	+	0.1	NA	Intergenic	Intergenic	-1388	NM_003547	8369	Hs.553507	NM_003547	ENSG00000275663	HIST1H4G	H4/l|H4FL	histone cluster 1 H4 family member g	protein-coding
17.9667-11	chr8	129962652	129962997	+	0.1	NA	intron (NM_001353256, intron 2 of 13)	MLT1K|LTR|ERVL-MaLR	-23013	NM_001256763	51571	Hs.126941	NM_016623	ENSG00000153310	FAM49B	BM-009|L1	family with sequence similarity 49 member B	protein-coding
15.4-15	chr20	52516918	52517130	+	0.1	NA	Intergenic	L4_C_Mam|LINE|RTE-X	-103814	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA
27.7333-9	chr5	42503153	42503511	+	0.1	NA	intron (NM_001242401, intron 2 of 10)	intron (NM_001242401, intron 2 of 10)	-44711	NM_001242402	2690	Hs.125180	NM_000163	ENSG00000112964	GHR	GHBP|GHIP	growth hormone receptor	protein-coding
20.1-8	chr6	43076433	43076735	+	0.1	NA	promoter-TSS (NM_001270398)	promoter-TSS (NM_001270398)	-230	NM_001270398	5754	Hs.90572	NM_002821	ENSG00000112655	PTK7	CCK-4|CCK4	protein tyrosine kinase 7 (inactive)	protein-coding
39.4-2	chr10	53066009	53066770	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-294689	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
13.3333-5	chr14	64545469	64545602	+	0.1	NA	Intergenic	AluSp|SINE|Alu	-4426	NM_172365	145376	Hs.144696	NM_172365	ENSG00000165807	PPP1R36	C14orf50	protein phosphatase 1 regulatory subunit 36	protein-coding
21.1667-4	chr12	5428503	5428904	+	0.1	NA	Intergenic	Intergenic	-3405	NM_001102654	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding
22.7333-10	chr8	86319593	86320027	+	0.1	NA	Intergenic	Intergenic	-22737	NM_007013	11059	Hs.655189	NM_007013	ENSG00000123124	WWP1	AIP5|Tiul1|hSDRP1	WW domain containing E3 ubiquitin protein ligase 1	protein-coding
13.1-3	chr2	149475515	149475703	+	0.1	NA	Intergenic	Intergenic	-111749	NR_110240	101929231	Hs.5324	NR_110240	ENSG00000231969	LOC101929231	-	uncharacterized LOC101929231	ncRNA
44.0333-3	chr2	63253198	63253638	+	0.1	NA	intron (NR_148705, intron 13 of 16)	L1PA16|LINE|L1	-133876	NR_036635	100169989	Hs.606147	NR_036635	ENSG00000242412	DBIL5P2	ELP1P	diazepam binding inhibitor-like 5 pseudogene 2	pseudo
30.5-2	chr1	118009931	118010510	+	0.1	NA	intron (NM_206996, intron 30 of 48)	L1MA8|LINE|L1	80481	NM_006784	10885	Hs.310809	NM_006784	ENSG00000065183	WDR3	DIP2|UTP12	WD repeat domain 3	protein-coding
16.9667-6	chr22	44961214	44961544	+	0.1	NA	intron (NM_001284296, intron 2 of 13)	L1PA16|LINE|L1	42240	NR_147506	101927551	Hs.683911	NR_147506	ENSG00000230922	LOC101927551	-	uncharacterized LOC101927551	ncRNA
24.5-9	chr20	28785890	28786168	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	-183364	NR_132315	100289097	Hs.529357	NR_132315	ENSG00000282826	FRG1CP	-	FSHD region gene 1 family member C, pseudogene	pseudo
23.2-8	chr2	60665481	60665792	+	0.1	NA	Intergenic	Intergenic	-90632	NM_022894	64895	Hs.387471	NM_022894	ENSG00000115421	PAPOLG	-	poly(A) polymerase gamma	protein-coding
15.9333-11	chr3	93775178	93775337	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	198824	NM_001314077	5627	Hs.64016	NM_000313	ENSG00000184500	PROS1	PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6	protein S	protein-coding
25.5	chr15	89335782	89336166	+	0.1	NA	Intergenic	Intergenic	-1150	NM_001126131	5428	Hs.706868	NM_002693	ENSG00000140521	POLG	MDP1|MIRAS|MTDPS4A|MTDPS4B|PEO|POLG1|POLGA|SANDO|SCAE	DNA polymerase gamma, catalytic subunit	protein-coding
14.0667-10	chr8	87175430	87175592	+	0.1	NA	intron (NM_173538, intron 4 of 10)	L1MA2|LINE|L1	309096	NM_173538	168975	Hs.246284	NM_173538	ENSG00000176571	CNBD1	-	cyclic nucleotide binding domain containing 1	protein-coding
27.2667-8	chr16	49260613	49261156	+	0.1	NA	Intergenic	L1MC2|LINE|L1	20954	NM_004352	869	Hs.458423	NM_004352	ENSG00000102924	CBLN1	-	cerebellin 1 precursor	protein-coding
19.9-16	chr7	89214397	89214631	+	0.1	NA	intron (NM_181646, intron 1 of 3)	intron (NM_181646, intron 1 of 3)	-418777	NM_152706	219557	Hs.112877	NM_152706	ENSG00000164645	TEX47	C7orf62	testis expressed 47	protein-coding
20.1667-17	chr7	90187180	90187469	+	0.1	NA	intron (NR_110029, intron 2 of 2)	intron (NR_110029, intron 2 of 2)	24311	NR_110029	100874100	Hs.573339	NR_110029	ENSG00000227646	STEAP2-AS1	-	STEAP2 antisense RNA 1	ncRNA
34.2-9	chr6	169681247	169681755	+	0.1	NA	intron (NM_182552, intron 2 of 25)	L1M3a|LINE|L1	20528	NM_182552	253769	Hs.131903	NM_182552	ENSG00000184465	WDR27	-	WD repeat domain 27	protein-coding
21.4667-2	chr14	47821281	47821694	+	0.1	NA	Intergenic	L1MA3|LINE|L1	-26473	NR_039996	100506433	Hs.547419	NR_039996	ENSG00000259129	LINC00648	-	long intergenic non-protein coding RNA 648	ncRNA
30.8667-2	chr14	72110363	72110984	+	0.1	NA	intron (NM_001370288, intron 2 of 16)	intron (NM_001370288, intron 2 of 16)	177146	NM_001370293	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G protein signaling 6	protein-coding
10.3667	chr1	116941044	116941147	+	0.1	NA	intron (NM_020440, intron 1 of 8)	intron (NM_020440, intron 1 of 8)	31179	NM_020440	5738	Hs.418093	NM_020440	ENSG00000134247	PTGFRN	CD315|CD9P-1|EWI-F|FPRP|SMAP-6	prostaglandin F2 receptor inhibitor	protein-coding
34.0333-6	chr7	25081422	25082030	+	0.1	NA	Intergenic	L1ME3G|LINE|L1	43635	NM_018947	54205	Hs.437060	NM_018947	ENSG00000172115	CYCS	CYC|HCS|THC4	cytochrome c, somatic	protein-coding
11.7667-7	chr5	121360209	121360344	+	0.1	NA	Intergenic	L1MC|LINE|L1	37726	NR_104999	102467226		NR_104999		LOC102467226	-	uncharacterized LOC102467226	ncRNA
11.5-10	chr6	103667935	103668087	+	0.1	NA	Intergenic	L1MB5|LINE|L1	1191535	NM_001321084	57531	Hs.434340	NM_020771	ENSG00000085382	HACE1	SPPRS	HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1	protein-coding
18.4-13	chr8	120057451	120057874	+	0.1	NA	Intergenic	Intergenic	-67440	NM_021110	7373	Hs.409662	NM_021110	ENSG00000187955	COL14A1	UND	collagen type XIV alpha 1 chain	protein-coding
48.1667-2	chr2	78519119	78519979	+	0.1	NA	Intergenic	AluSx|SINE|Alu	-25982	NR_136311	105374820	Hs.570225	NR_136311		LOC105374820	-	uncharacterized LOC105374820	ncRNA
24.4-13	chr2	68612478	68612947	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-30876	NM_138964	10887	Hs.683430	NM_138964	ENSG00000169618	PROKR1	GPR73|GPR73a|PK-R1|PKR1|ZAQ	prokineticin receptor 1	protein-coding
33.6667-3	chr15	19830633	19831231	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	-451812	NR_038836	646096	Hs.448789	NR_038836	ENSG00000259156	CHEK2P2	-	checkpoint kinase 2 pseudogene 2	pseudo
31.3333-9	chr5	170727711	170728196	+	0.1	NA	intron (NM_001278339, intron 5 of 7)	AluJo|SINE|Alu	-46483	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA
23.9333-3	chr1	84594004	84594469	+	0.1	NA	Intergenic	L1PA11|LINE|L1	-19796	NM_004388	1486	Hs.513557	NM_004388	ENSG00000117151	CTBS	CTB	chitobiase	protein-coding
26.3333-12	chr8	130061560	130061881	+	0.1	NA	intron (NM_001362925, intron 27 of 29)	intron (NM_001362925, intron 27 of 29)	23048	NR_045385	100507117	Hs.106015	NR_045385	ENSG00000280543	ASAP1-IT2	-	ASAP1 intronic transcript 2	ncRNA
25.4333-9	chr22	49124263	49124561	+	0.1	NA	Intergenic	L1ME3D|LINE|L1	257642	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA
10.0333-2	chr18	32755543	32755741	+	0.1	NA	intron (NM_020805, intron 2 of 8)	intron (NM_020805, intron 2 of 8)	17381	NM_020805	57565	Hs.446164	NM_020805	ENSG00000197705	KLHL14	-	kelch like family member 14	protein-coding
28.8667	chr11	41526883	41527328	+	0.1	NA	Intergenic	L1PA7|LINE|L1	-67453	NM_001258419	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
17.2667-3	chr1	94905060	94905297	+	0.1	NA	intron (NM_001839, intron 1 of 6)	intron (NM_001839, intron 1 of 6)	20630	NM_001286056	1266	Hs.483454	NM_001839	ENSG00000117519	CNN3	-	calponin 3	protein-coding
32.3333-7	chr3	18340796	18341348	+	0.1	NA	Intergenic	Intergenic	84267	NM_002971	6304	Hs.517717	NM_002971	ENSG00000182568	SATB1	-	SATB homeobox 1	protein-coding
23.7667-7	chr2	24808165	24808530	+	0.1	NA	intron (NM_001322101, intron 3 of 7)	AluSx|SINE|Alu	14922	NM_001322101	79172	Hs.731569	NM_024322	ENSG00000138092	CENPO	CENP-O|ICEN-36|MCM21R	centromere protein O	protein-coding
14.6667-3	chr2	39381144	39381416	+	0.1	NA	intron (NM_003618, intron 1 of 33)	L1MB7|LINE|L1	56005	NM_003618	8491	Hs.655750	NM_003618	ENSG00000011566	MAP4K3	GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1	mitogen-activated protein kinase kinase kinase kinase 3	protein-coding
11.7-2	chr12	23114803	23114954	+	0.1	NA	Intergenic	Intergenic	-60758	NR_120471	101928441	Hs.129111	NR_120471	ENSG00000256321	LOC101928441	-	uncharacterized LOC101928441	ncRNA
47.2667	chr2	62961035	62961647	+	0.1	NA	intron (NM_001354215, intron 15 of 24)	intron (NM_001354215, intron 15 of 24)	86370	NR_027069	100132215	Hs.656781	NR_027069	ENSG00000231609	LOC100132215	-	uncharacterized LOC100132215	ncRNA
24.0667-7	chr20	49058508	49058816	+	0.1	NA	intron (NM_001362762, intron 2 of 24)	intron (NM_001362762, intron 2 of 24)	12350	NM_001316	1434	Hs.90073	NM_001316	ENSG00000124207	CSE1L	CAS|CSE1|XPO2	chromosome segregation 1 like	protein-coding
12.5667-9	chr5	115104233	115104520	+	0.1	NA	Intergenic	Intergenic	65532	NM_001300759	55521	Hs.519514	NM_018700	ENSG00000152503	TRIM36	ANPH|HAPRIN|RBCC728|RNF98	tripartite motif containing 36	protein-coding
48.4-2	chr4	34413743	34414332	+	0.1	NA	Intergenic	Intergenic	-144290	NR_147183	105374394	Hs.570782	NR_147183	ENSG00000248685	LINC02484	-	long intergenic non-protein coding RNA 2484	ncRNA
14.5333-4	chr2	50477295	50477621	+	0.1	NA	intron (NM_001330093, intron 15 of 22)	intron (NM_001330093, intron 15 of 22)	-129702	NM_138735	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
19.1-7	chr13	81458894	81459273	+	0.1	NA	Intergenic	Intergenic	-232100	NR_047494	100861546	Hs.539621	NR_047494	ENSG00000260094	LINC00564	-	long intergenic non-protein coding RNA 564	ncRNA
12.9667-4	chr13	108186322	108186602	+	0.1	NA	Intergenic	Tigger3a|DNA|TcMar-Tigger	28320	NM_002312	3981	Hs.166091	NM_002312	ENSG00000174405	LIG4	LIG4S	DNA ligase 4	protein-coding
40.6667-4	chr12	78711257	78712006	+	0.1	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	-152351	NM_001135805	6857	Hs.310545	NM_005639	ENSG00000067715	SYT1	BAGOS|P65|SVP65|SYT	synaptotagmin 1	protein-coding
15.7333-6	chr15	95166207	95166527	+	0.1	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	160733	NR_034095	400456	Hs.536404	NR_034095	ENSG00000248441	LINC01197	-	long intergenic non-protein coding RNA 1197	ncRNA
26.6333-5	chr20	48662263	48662738	+	0.1	NA	intron (NM_020820, intron 15 of 39)	MIR|SINE|MIR	165499	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1	protein-coding
24.8333-2	chr12	116271843	116272345	+	0.1	NA	intron (NM_015335, intron 1 of 30)	intron (NM_015335, intron 1 of 30)	5092	NM_015335	23389	Hs.603766	NM_015335	ENSG00000123066	MED13L	MRFACD|PROSIT240|THRAP2|TRAP240L	mediator complex subunit 13L	protein-coding
40.6667-3	chr11	41123701	41124238	+	0.1	NA	intron (NM_001258419, intron 1 of 6)	L3b|LINE|CR1	335667	NM_020929	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
36.1667-4	chr14	36638654	36639409	+	0.1	NA	Intergenic	Intergenic	-18537	NM_006194	5083	Hs.132576	NM_006194	ENSG00000198807	PAX9	STHAG3	paired box 9	protein-coding
20.7-7	chr8	108483837	108484293	+	0.1	NA	intron (NR_138033, intron 9 of 9)	intron (NR_138033, intron 9 of 9)	40441	NM_014673	9694	Hs.654351	NM_014673	ENSG00000104412	EMC2	KIAA0103|TTC35	ER membrane protein complex subunit 2	protein-coding
14.8333	chr1	176627594	176627926	+	0.1	NA	intron (NM_021936, intron 3 of 4)	L2|LINE|L2	164585	NM_020318	60676	Hs.187284	NM_020318	ENSG00000116183	PAPPA2	PAPP-A2|PAPP-E|PAPPE|PLAC3	pappalysin 2	protein-coding
23.1333-4	chr2	103000623	103000904	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-16334	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
26.3333-6	chr20	43269564	43269935	+	0.1	NA	Intergenic	L2|LINE|L2	-79843	NM_007050	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	protein tyrosine phosphatase receptor type T	protein-coding
10.7667-3	chr2	40879812	40879920	+	0.1	NA	Intergenic	L1ME3E|LINE|L1	-367431	NM_001112802	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding
31.0333-9	chr7	74579862	74580292	+	0.1	NA	intron (NM_016328, intron 22 of 26)	MIRc|SINE|MIR	-15891	NR_162116	113218504		NR_162116		MIR10525	-	microRNA 10525	ncRNA
17.6333-7	chr19	48856181	48856506	+	0.1	NA	intron (NM_001161354, intron 8 of 16)	AluY|SINE|Alu	12274	NM_001161354	57664	Hs.9469	NM_020904	ENSG00000105559	PLEKHA4	PEPP1	pleckstrin homology domain containing A4	protein-coding
24.5-8	chr19	18674138	18674578	+	0.1	NA	Intergenic	AluJo|SINE|Alu	-9322	NM_001098482	23373	Hs.371096	NM_015321	ENSG00000105662	CRTC1	MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1	CREB regulated transcription coactivator 1	protein-coding
20.0333-7	chr19	37721737	37722027	+	0.1	NA	Intergenic	FLAM_C|SINE|Alu	-2121	NM_032689	84775	Hs.116622	NM_032689	ENSG00000198182	ZNF607	-	zinc finger protein 607	protein-coding
28.6-23	chr7	92425971	92426412	+	0.1	NA	intron (NR_145992, intron 5 of 9)	intron (NR_145992, intron 5 of 9)	11123	NR_145992	105375396		NM_001317905	ENSG00000230927	TMBIM7P	-	transmembrane BAX inhibitor motif containing 7, pseudogene	pseudo
16.7-8	chr18	11203749	11204065	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-55145	NM_022068	63895	Hs.436902	NM_022068	ENSG00000154864	PIEZO2	C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS	piezo type mechanosensitive ion channel component 2	protein-coding
23.9333-7	chr20	52805670	52806091	+	0.1	NA	Intergenic	Intergenic	-166478	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding
29.6667-6	chr4	52327774	52328173	+	0.1	NA	Intergenic	L1MA6|LINE|L1	276669	NM_145263	132671	Hs.527090	NM_145263	ENSG00000163071	SPATA18	Mieap|SPETEX1	spermatogenesis associated 18	protein-coding
21.3667-6	chr16	87315206	87315513	+	0.1	NA	intron (NM_001256917, intron 2 of 4)	intron (NM_001256917, intron 2 of 4)	2033	NM_001195125	100506581	Hs.729380	NM_001195124	ENSG00000260456	C16orf95	-	chromosome 16 open reading frame 95	protein-coding
8.13334	chr6	55116495	55116594	+	0.1	NA	intron (NM_001526, intron 1 of 7)	intron (NM_001526, intron 1 of 7)	10084	NM_001526	3062	Hs.151624	NM_001526	ENSG00000137252	HCRTR2	OX2R	hypocretin receptor 2	protein-coding
39-2	chr11	78541569	78542154	+	0.1	NA	intron (NR_120566, intron 1 of 3)	intron (NR_120566, intron 1 of 3)	8685	NR_120566	101928896	Hs.659055	NR_120566	ENSG00000255084	LOC101928896	-	uncharacterized LOC101928896	ncRNA
30.3-3	chr19	35431373	35431807	+	0.1	NA	Intergenic	L2b|LINE|L2	-16667	NM_001370087	2867	Hs.248056	NM_005306	ENSG00000126262	FFAR2	FFA2R|GPR43	free fatty acid receptor 2	protein-coding
22.4-18	chr7	43839595	43839846	+	0.1	NA	Intergenic	AluJb|SINE|Alu	29797	NM_032014	64951	Hs.284286	NM_032014	ENSG00000062582	MRPS24	HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47	mitochondrial ribosomal protein S24	protein-coding
22.4-6	chr12	57673147	57673601	+	0.1	NA	Intergenic	L1MB8|LINE|L1	-20581	NM_001261421	10956	Hs.527861	NM_006812	ENSG00000135506	OS9	ERLEC2|OS-9	OS9 endoplasmic reticulum lectin	protein-coding
24.7667	chr11	93146969	93147406	+	0.1	NA	3' UTR (NM_001286139, exon 11 of 11)	3' UTR (NM_001286139, exon 11 of 11)	50239	NM_001286139	120103	Hs.148766	NM_152313	ENSG00000180773	SLC36A4	PAT4	solute carrier family 36 member 4	protein-coding
23.3333-6	chr2	115685636	115685999	+	0.1	NA	intron (NM_001321912, intron 6 of 25)	intron (NM_001321912, intron 6 of 25)	342002	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
6.36667-2	chr5	112959382	112959445	+	0.1	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-17385	NM_152624	167227	Hs.443875	NM_152624	ENSG00000172795	DCP2	NUDT20	decapping mRNA 2	protein-coding
16.6667-6	chr2	11467227	11467654	+	0.1	NA	Intergenic	AluJr|SINE|Alu	-1263	NM_001278278	1876	Hs.603093	NM_198256	ENSG00000169016	E2F6	E2F-6	E2F transcription factor 6	protein-coding
20.3333-15	chr8	82944530	82944775	+	0.1	NA	intron (NR_134295, intron 2 of 3)	L1MD|LINE|L1	32548	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
15.5667	chr1	240951827	240952100	+	0.1	NA	intron (NM_001350116, intron 4 of 16)	L1MC3|LINE|L1	-180309	NR_036069	100422856		NR_036069	ENSG00000265831	MIR3123	mir-3123	microRNA 3123	ncRNA
18.1333-5	chr12	4319968	4320325	+	0.1	NA	Intergenic	AluY|SINE|Alu	-1067	NM_020375	57103	Hs.504545	NM_020375	ENSG00000078237	TIGAR	C12orf5|FR2BP	TP53 induced glycolysis regulatory phosphatase	protein-coding
10.6333-2	chr10	6566686	6566807	+	0.1	NA	intron (NM_001323265, intron 1 of 17)	intron (NM_001323265, intron 1 of 17)	13530	NM_006257	5588	Hs.498570	NM_006257	ENSG00000065675	PRKCQ	PRKCT|nPKC-theta	protein kinase C theta	protein-coding
29.7333-12	chr4	44333500	44333879	+	0.1	NA	intron (NM_198353, intron 1 of 1)	intron (NM_198353, intron 1 of 1)	115120	NM_198353	386617	Hs.479644	NM_198353	ENSG00000183783	KCTD8	-	potassium channel tetramerization domain containing 8	protein-coding
14.9667-4	chr2	30924707	30924937	+	0.1	NA	exon (NM_001329095, exon 13 of 16)	exon (NM_001329095, exon 13 of 16)	-117376	NM_144575	92291	Hs.660911	NM_144575	ENSG00000162949	CAPN13	-	calpain 13	protein-coding
17.1333-20	chr7	28152620	28152937	+	0.1	NA	intron (NM_175061, intron 1 of 4)	intron (NM_175061, intron 1 of 4)	-27679	NR_034097	100128081	Hs.434307	NR_034097		JAZF1-AS1	-	JAZF1 antisense RNA 1	ncRNA
21.0333-13	chr5	93449	93769	+	0.1	NA	intron (NM_052909, intron 1 of 19)	intron (NM_052909, intron 1 of 19)	1441	NM_052909	153478	Hs.535800	NM_052909	ENSG00000153404	PLEKHG4B	-	pleckstrin homology and RhoGEF domain containing G4B	protein-coding
14-2	chr12	97935072	97935244	+	0.1	NA	Intergenic	Intergenic	3963	NR_039716	100616287		NR_039716	ENSG00000265861	MIR4495	-	microRNA 4495	ncRNA
23.9333-15	chr8	117116981	117117516	+	0.1	NA	intron (NM_001172815, intron 2 of 10)	MIR|SINE|MIR	-17747	NM_001172814	169026	Hs.532270	NM_173851	ENSG00000164756	SLC30A8	ZNT8|ZnT-8	solute carrier family 30 member 8	protein-coding
30.7667-5	chr15	65875422	65875830	+	0.1	NA	intron (NM_004663, intron 1 of 4)	intron (NM_004663, intron 1 of 4)	6135	NM_004663	8766	Hs.321541	NM_004663	ENSG00000103769	RAB11A	YL8	RAB11A, member RAS oncogene family	protein-coding
23.2667	chr1	33250442	33250701	+	0.1	NA	Intergenic	L1PA11|LINE|L1	-5921	NM_152493	149076	Hs.743358	NM_152493	ENSG00000160094	ZNF362	RN|lin-29	zinc finger protein 362	protein-coding
16.1667-3	chr11	46234591	46234822	+	0.1	NA	Intergenic	Intergenic	-42956	NM_052854	90993	Hs.405961	NM_052854	ENSG00000157613	CREB3L1	OASIS|OI16	cAMP responsive element binding protein 3 like 1	protein-coding
18.8333-15	chr5	107600966	107601325	+	0.1	NA	intron (NM_001962, intron 1 of 4)	X7B_LINE|LINE|CR1	69792	NM_001962	1946	Hs.288741	NM_001962	ENSG00000184349	EFNA5	AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS	ephrin A5	protein-coding
7.56667-2	chr14	75238519	75238628	+	0.1	NA	Intergenic	Intergenic	-40255	NM_005252	2353	Hs.25647	NM_005252	ENSG00000170345	FOS	AP-1|C-FOS|p55	Fos proto-oncogene, AP-1 transcription factor subunit	protein-coding
29.1	chr10	79269939	79270503	+	0.1	NA	intron (NM_020338, intron 7 of 24)	intron (NM_020338, intron 7 of 24)	-77248	NM_005729	10105	Hs.381072	NM_005729	ENSG00000108179	PPIF	CYP3|CyP-M|Cyp-D|CypD	peptidylprolyl isomerase F	protein-coding
23.6333-10	chr5	145699766	145700066	+	0.1	NA	Intergenic	Intergenic	135426	NM_182960	153768	Hs.314261	NM_138492	ENSG00000186314	PRELID2	-	PRELI domain containing 2	protein-coding
36.0667-4	chr4	106087291	106087830	+	0.1	NA	intron (NM_001290768, intron 26 of 26)	L1PA8A|LINE|L1	-65082	NR_125928	101929577	Hs.631131	NR_125928	ENSG00000249635	LOC101929577	-	uncharacterized LOC101929577	ncRNA
31.9-2	chr13	28102471	28103036	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-2161	NM_004119	2322	Hs.507590	NM_004119	ENSG00000122025	FLT3	CD135|FLK-2|FLK2|STK1	fms related tyrosine kinase 3	protein-coding
17.1333-10	chr17	49027201	49027534	+	0.1	NA	intron (NM_001160423, intron 4 of 12)	Charlie19a|DNA|hAT-Charlie	29982	NM_006546	10642	Hs.144936	NM_006546	ENSG00000159217	IGF2BP1	CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1	insulin like growth factor 2 mRNA binding protein 1	protein-coding
24.2-8	chr5	34884583	34885098	+	0.1	NA	intron (NM_001317949, intron 9 of 10)	intron (NM_001317949, intron 9 of 10)	30664	NM_002853	5810	Hs.38114	NM_002853	ENSG00000113456	RAD1	HRAD1|REC1	RAD1 checkpoint DNA exonuclease	protein-coding
15.0333-5	chr13	57242459	57242709	+	0.1	NA	Intergenic	LTR16|LTR|ERVL	75387	NM_001130407	729250	Hs.525056	NM_001130407	ENSG00000234278	PRR20E	PRR20|PRR20A|PRR20B|PRR20C|PRR20D	proline rich 20E	protein-coding
25.3667-8	chr9	77725396	77725695	+	0.1	NA	intron (NM_002072, intron 6 of 6)	intron (NM_002072, intron 6 of 6)	-77223	NM_004297	9630	Hs.657795	NM_004297	ENSG00000156049	GNA14	-	G protein subunit alpha 14	protein-coding
13.8667-9	chr5	41173301	41173531	+	0.1	NA	intron (NM_000065, intron 8 of 17)	intron (NM_000065, intron 8 of 17)	40116	NM_000065	729	Hs.481992	NM_000065	ENSG00000039537	C6	-	complement C6	protein-coding
27.7-8	chr2	34787217	34787592	+	0.1	NA	Intergenic	Intergenic	109847	NR_126404	104355288	Hs.624529	NR_126404	ENSG00000228262	LINC01320	-	long intergenic non-protein coding RNA 1320	ncRNA
13.9-8	chr7	136031992	136032300	+	0.1	NA	Intergenic	L2c|LINE|L2	-54787	NM_145808	136319	Hs.602015	NM_145808	ENSG00000105887	MTPN	GCDP|V-1	myotrophin	protein-coding
36.3333-3	chr4	129319314	129319927	+	0.1	NA	Intergenic	L1ME1|LINE|L1	223468	NM_001099783	132321	Hs.567679	NM_173487	ENSG00000151470	C4orf33	-	chromosome 4 open reading frame 33	protein-coding
37.4-3	chr13	41020141	41020657	+	0.1	NA	intron (NM_001370329, intron 1 of 9)	intron (NM_001370329, intron 1 of 9)	-1083	NM_001370332	1997	Hs.135646	NM_172373	ENSG00000120690	ELF1	EFTUD1|RIA1	E74 like ETS transcription factor 1	protein-coding
34.0333-9	chr7	96254403	96254910	+	0.1	NA	intron (NM_001160210, intron 3 of 17)	(TACACA)n|Simple_repeat|Simple_repeat	-34900	NR_030322	693176		NR_030322	ENSG00000208025	MIR591	MIRN591|hsa-mir-591	microRNA 591	ncRNA
9.46667-3	chr9	26806408	26806502	+	0.1	NA	Intergenic	Intergenic	86347	NM_024828	79886	Hs.178357	NM_024828	ENSG00000120159	CAAP1	C9orf82|CAAP	caspase activity and apoptosis inhibitor 1	protein-coding
12.9-8	chr6	123492372	123492614	+	0.1	NA	intron (NM_001256020, intron 8 of 8)	intron (NM_001256020, intron 8 of 8)	52889	NR_110844	101927990	Hs.660877	NR_110844		TRDN-AS1	HRAT13	TRDN antisense RNA 1	ncRNA
30.5667-4	chr3	193801798	193802300	+	0.1	NA	Intergenic	AluSz6|SINE|Alu	41960	NR_146718	105374285	Hs.552531	NR_146718		LINC02038	-	long intergenic non-protein coding RNA 2038	ncRNA
21.9333-10	chr2	179882743	179883240	+	0.1	NA	Intergenic	Intergenic	-21379	NR_148057	151126	Hs.655005	NM_152520	ENSG00000144331	ZNF385B	ZNF533	zinc finger protein 385B	protein-coding
31.2-6	chr11	115363083	115363540	+	0.1	NA	intron (NM_001098517, intron 1 of 8)	intron (NM_001098517, intron 1 of 8)	29734	NR_135108	105369509	Hs.736064	NR_135108		LOC105369509	-	uncharacterized LOC105369509	ncRNA
20.4333-3	chr21	31949672	31950104	+	0.1	NA	intron (NM_014586, intron 4 of 10)	MSTB1|LTR|ERVL-MaLR	76868	NM_014586	30811	Hs.109437	NM_014586	ENSG00000142149	HUNK	-	hormonally up-regulated Neu-associated kinase	protein-coding
23.2-21	chrX	40114141	40114716	+	0.1	NA	intron (NM_001123384, intron 1 of 13)	intron (NM_001123384, intron 1 of 13)	-16470	NM_017745	54880	Hs.659681	NM_017745	ENSG00000183337	BCOR	ANOP2|MAA2|MCOPS2	BCL6 corepressor	protein-coding
10.2-4	chr6	35257077	35257277	+	0.1	NA	Intergenic	AluSc8|SINE|Alu	-2558	NM_003427	7629	Hs.388024	NM_003427	ENSG00000065029	ZNF76	D6S229E|ZNF523|Zfp523	zinc finger protein 76	protein-coding
20.2333-3	chr1	109904717	109905109	+	0.1	NA	Intergenic	Intergenic	-5936	NM_000757	1435	Hs.173894	NM_000757	ENSG00000184371	CSF1	CSF-1|MCSF	colony stimulating factor 1	protein-coding
31.1667-2	chr6	163511592	163512195	+	0.1	NA	intron (NM_206853, intron 3 of 6)	L1ME3Cz|LINE|L1	97175	NM_206855	9444	Hs.510324	NM_006775	ENSG00000112531	QKI	Hqk|QK|QK1|QK3|hqkI	QKI, KH domain containing RNA binding	protein-coding
9.6	chr1	194474747	194474849	+	0.1	NA	Intergenic	Intergenic	1170053	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
10.6667-4	chr9	83106491	83106674	+	0.1	NA	Intergenic	L2|LINE|L2	-43440	NM_152573	158158	Hs.129136	NM_152573	ENSG00000165105	RASEF	RAB45	RAS and EF-hand domain containing	protein-coding
21.1667-11	chr7	2860673	2861095	+	0.1	NA	Intergenic	MLT2C1|LTR|ERVL	-16576	NM_001293092	2768	Hs.487341	NM_007353	ENSG00000146535	GNA12	NNX3|RMP|gep	G protein subunit alpha 12	protein-coding
23-7	chr4	42730700	42731213	+	0.1	NA	Intergenic	Intergenic	-73851	NM_006095	10396	Hs.435052	NM_006095	ENSG00000124406	ATP8A1	ATPASEII|ATPIA|ATPP2	ATPase phospholipid transporting 8A1	protein-coding
34.2-3	chr14	61766580	61767107	+	0.1	NA	intron (NM_003082, intron 1 of 9)	intron (NM_003082, intron 1 of 9)	4423	NM_003082	6617	Hs.179312	NM_003082	ENSG00000023608	SNAPC1	PTFgamma|SNAP43	small nuclear RNA activating complex polypeptide 1	protein-coding
27.5333	chr1	36806694	36807067	+	0.1	NA	intron (NM_000831, intron 13 of 15)	intron (NM_000831, intron 13 of 15)	227635	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding
15.2667-2	chr11	96902562	96902865	+	0.1	NA	Intergenic	Intergenic	394288	NR_135097	105369443	Hs.599377	NR_135097	ENSG00000256684	LINC02737	-	long intergenic non-protein coding RNA 2737	ncRNA
27.2-8	chr2	59752152	59752524	+	0.1	NA	Intergenic	Intergenic	534630	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
21.6333	chr1	211249146	211249469	+	0.1	NA	Intergenic	Intergenic	-9970	NM_001136224	55758	Hs.356399	NM_018254	ENSG00000117625	RCOR3	-	REST corepressor 3	protein-coding
9.13333-2	chr18	59760497	59760678	+	0.1	NA	Intergenic	MIR3|SINE|MIR	-63164	NM_133459	147372	Hs.34333	NM_133459	ENSG00000183287	CCBE1	HKLLS1	collagen and calcium binding EGF domains 1	protein-coding
17.7-16	chrX	55196733	55197106	+	0.1	NA	Intergenic	MER4-int|LTR|ERV1	-13312	NR_132964	106635544		NR_132964		SNORA109	-	small nucleolar RNA, H/ACA box 109	snoRNA
35.4333-5	chr16	52104470	52104851	+	0.1	NA	Intergenic	L2c|LINE|L2	19379	NR_104655	102467079	Hs.98466	NR_104655	ENSG00000261749	LINC02180	-	long intergenic non-protein coding RNA 2180	ncRNA
19.0667-7	chr5	116398278	116398657	+	0.1	NA	Intergenic	Intergenic	-23897	NR_104675	101927190	Hs.639849	NR_104675		LOC101927190	-	uncharacterized LOC101927190	ncRNA
34.8667	chr1	23007915	23008495	+	0.1	NA	Intergenic	AluY|SINE|Alu	7647	NM_001242521	729059	Hs.236896	NM_001242521	ENSG00000227868	TEX46	C1orf234|TEX#	testis expressed 46	protein-coding
16.7-5	chr13	40439222	40439430	+	0.1	NA	intron (NR_024506, intron 5 of 5)	intron (NR_024506, intron 5 of 5)	41680	NR_024507	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	lncFOXO1	long intergenic non-protein coding RNA 598	ncRNA
30.3333-2	chr14	46062608	46063165	+	0.1	NA	Intergenic	Intergenic	-1273	NR_102702	100506412	Hs.207545	NR_102699	ENSG00000258700	LINC00871	-	long intergenic non-protein coding RNA 871	ncRNA
27.5	chr1	56200399	56200798	+	0.1	NA	Intergenic	Intergenic	-214365	NR_147163	105378744	Hs.183974	NR_147163	ENSG00000223956	LINC01767	-	long intergenic non-protein coding RNA 1767	ncRNA
30.5667-2	chr15	67280221	67280690	+	0.1	NA	intron (NM_001322475, intron 3 of 17)	MLT1A0|LTR|ERVL-MaLR	-25257	NM_001271885	79719	Hs.254642	NM_024666	ENSG00000103591	AAGAB	KPPP1|PPKP1|PPKP1A|p34	alpha and gamma adaptin binding protein	protein-coding
18.9667-5	chr20	45637335	45637742	+	0.1	NA	Intergenic	L1MA8|LINE|L1	-6254	NM_147198	259240	Hs.249828	NM_147198	ENSG00000180205	WFDC9	WAP9|dJ688G8.2	WAP four-disulfide core domain 9	protein-coding
21.9333-2	chr1	117559951	117560386	+	0.1	NA	Intergenic	THE1B|LTR|ERVL-MaLR	45602	NR_121626	100996263	Hs.202533	NR_121626	ENSG00000236866	LOC100996263	-	uncharacterized LOC100996263	ncRNA
37.5667-4	chr8	97786012	97786533	+	0.1	NA	intron (NM_018407, intron 1 of 6)	intron (NM_018407, intron 1 of 6)	10484	NM_018407	55353	Hs.492314	NM_018407	ENSG00000104341	LAPTM4B	LAPTM4beta|LC27	lysosomal protein transmembrane 4 beta	protein-coding
30.1333-12	chr8	2871085	2871435	+	0.1	NA	Intergenic	Intergenic	-142809	NR_125426	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA
18.0333	chr1	14867492	14867968	+	0.1	NA	intron (NM_201628, intron 1 of 14)	intron (NM_201628, intron 1 of 14)	-56399	NM_001370229	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	kazrin, periplakin interacting protein	protein-coding
36.8667-6	chr4	107472717	107473140	+	0.1	NA	Intergenic	L1ME3B|LINE|L1	247306	NM_005443	9061	Hs.368610	NM_005443	ENSG00000138801	PAPSS1	ATPSK1|PAPSS|SK1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	protein-coding
15.6333-10	chr2	64356317	64356564	+	0.1	NA	Intergenic	Intergenic	-15592	NR_106995	102465833		NR_106995	ENSG00000264297	MIR4433B	hsa-mir-4433b	microRNA 4433b	ncRNA
21-10	chr7	883667	884158	+	0.1	NA	intron (NM_015949, intron 1 of 8)	intron (NM_015949, intron 1 of 8)	7358	NM_015949	51608	Hs.107387	NM_015949	ENSG00000239857	GET4	C7orf20|CEE|CGI-20|TRC35	guided entry of tail-anchored proteins factor 4	protein-coding
41.0333	chr12	17137824	17138422	+	0.1	NA	Intergenic	Intergenic	149376	NR_036619	728622	Hs.741380	NR_036619		SKP1P2	SKP1B|p19B	S-phase kinase associated protein 1 pseudogene 2	pseudo
24.2	chr11	113167690	113168229	+	0.1	NA	intron (NM_181351, intron 1 of 18)	intron (NM_181351, intron 1 of 18)	105942	NR_034101	100288346	Hs.661826	NR_034101	ENSG00000227487	NCAM1-AS1	-	NCAM1 antisense RNA1	ncRNA
39.3	chr12	10788649	10789405	+	0.1	NA	Intergenic	(AATGAA)n|Simple_repeat|Simple_repeat	13600	NM_023919	50837	Hs.533754	NM_023919	ENSG00000121377	TAS2R7	T2R7|TRB4	taste 2 receptor member 7	protein-coding
15.9333-3	chr1	116405281	116405472	+	0.1	NA	TTS (NR_024126)	TTS (NR_024126)	13183	NR_024126	84852	Hs.664752	NM_032766	ENSG00000203865	ATP1A1-AS1	ATP1A1OS|C1orf203	ATP1A1 antisense RNA 1	ncRNA
36.2667-8	chr7	43731529	43732155	+	0.1	NA	Intergenic	AluSx|SINE|Alu	-2301	NM_001321200	55744	Hs.268887	NM_018224	ENSG00000106603	COA1	C7orf44|MITRAC15	cytochrome c oxidase assembly factor 1 homolog	protein-coding
45.0333	chr14	20992163	20992886	+	0.1	NA	intron (NM_022734, intron 4 of 13)	intron (NM_022734, intron 4 of 13)	2544	NM_022734	64745	Hs.512693	NM_022734	ENSG00000165792	METTL17	METT11D1	methyltransferase like 17	protein-coding
22.4667-3	chr16	64352783	64353097	+	0.1	NA	Intergenic	Intergenic	769123	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
22.3-2	chr1	240826057	240826536	+	0.1	NA	intron (NM_001350116, intron 10 of 16)	intron (NM_001350116, intron 10 of 16)	-214141	NM_022469	64388	Hs.98206	NM_022469	ENSG00000180875	GREM2	CKTSF1B2|DAND3|PRDC|STHAG9	gremlin 2, DAN family BMP antagonist	protein-coding
27.7333-4	chr14	66691503	66691808	+	0.1	NA	intron (NM_001024218, intron 2 of 21)	MER58B|DNA|hAT-Charlie	184248	NM_001024218	10243	Hs.208765	NM_020806	ENSG00000171723	GPHN	GEPH|GPH|GPHRYN|HKPX1|MOCODC	gephyrin	protein-coding
23.5333-10	chr3	68687683	68687969	+	0.1	NA	Intergenic	L1MB4|LINE|L1	187189	NR_135532	105377146	Hs.567895	NR_135532		LOC105377146	-	uncharacterized LOC105377146	ncRNA
27.6333-8	chr5	150170996	150171369	+	0.1	NA	intron (NM_001804, intron 1 of 2)	intron (NM_001804, intron 1 of 2)	4404	NM_001804	1044	Hs.1545	NM_001804	ENSG00000113722	CDX1	-	caudal type homeobox 1	protein-coding
42.7333-2	chr22	23285455	23286074	+	0.1	NA	intron (NM_004327, intron 10 of 22)	MER54B|LTR|ERVL	22997	NR_033408	26226	Hs.729589	NR_033408	ENSG00000230701	FBXW4P1	FBW3|FBXW3|SHFM3P1	F-box and WD repeat domain containing 4 pseudogene 1	pseudo
11.1667-7	chr8	144010397	144010618	+	0.1	NA	Intergenic	MLT2C1|LTR|ERVL	-1773	NM_198572	375686	Hs.97726	NM_198572	ENSG00000186583	SPATC1	SPATA15	spermatogenesis and centriole associated 1	protein-coding
22.1-9	chr4	108278943	108279359	+	0.1	NA	Intergenic	Intergenic	107031	NR_029373	641518	Hs.535760	NR_029373	ENSG00000232021	LEF1-AS1	LEF1NAT	LEF1 antisense RNA 1	ncRNA
38-5	chr3	78347055	78347552	+	0.1	NA	Intergenic	Intergenic	-298340	NR_146636	105377172		NR_146636		LINC02077	-	long intergenic non-protein coding RNA 2077	ncRNA
22.8-4	chr11	76661719	76662109	+	0.1	NA	intron (NM_001370190, intron 1 of 1)	MIRc|SINE|MIR	8024	NM_001370189	2615	Hs.151641	NM_005512	ENSG00000137507	LRRC32	D11S833E|GARP	leucine rich repeat containing 32	protein-coding
15.9333-9	chr22	10722637	10722829	+	0.1	NA	Intergenic	(TCCATTCCAT)n|Simple_repeat|Simple_repeat	238796	NR_132320	102723780		NR_132320		FRG1FP	-	FSHD region gene 1 family member F, pseudogene	pseudo
32.8333-4	chr19	48295250	48295671	+	0.1	NA	TTS (NM_144577)	TTS (NM_144577)	24039	NM_144577	93233	Hs.112645	NM_144577	ENSG00000105479	CCDC114	CILD20	coiled-coil domain containing 114	protein-coding
8.26667-2	chr17	15264210	15264293	+	0.1	NA	intron (NM_000304, intron 1 of 4)	(TAGA)n|Simple_repeat|Simple_repeat	1075	NM_000304	5376	Hs.372031	NM_000304	ENSG00000109099	PMP22	CIDP|CMT1A|CMT1E|DSS|GAS-3|GAS3|HMSNIA|HNPP|Sp110	peripheral myelin protein 22	protein-coding
21.8333-15	chr9	131122900	131123174	+	0.1	NA	non-coding (NR_033701, exon 6 of 6)	non-coding (NR_033701, exon 6 of 6)	-2549	NM_001318324	8021	Hs.654530	NM_005085	ENSG00000126883	NUP214	CAIN|CAN	nucleoporin 214	protein-coding
37.6667-3	chr20	14908080	14908769	+	0.1	NA	intron (NR_072988, intron 1 of 1)	AluSz6|SINE|Alu	21094	NR_037841	100379174	Hs.407533	NR_037841	ENSG00000235914	MACROD2-AS1	BA318C17.1|NCRNA00186	MACROD2 antisense RNA 1	ncRNA
19.9333-9	chr2	10057608	10058017	+	0.1	NA	3' UTR (NM_001037160, exon 3 of 3)	3' UTR (NM_001037160, exon 3 of 3)	13567	NM_001177718	8462	Hs.12229	NM_003597	ENSG00000172059	KLF11	FKLF|FKLF1|MODY7|TIEG2|Tieg3	Kruppel like factor 11	protein-coding
17.6-13	chr8	134032893	134033220	+	0.1	NA	Intergenic	Intergenic	146560	NR_125424	101927822	Hs.129114	NR_125424	ENSG00000253593	LOC101927822	-	uncharacterized LOC101927822	ncRNA
23.1-11	chr22	37165557	37165836	+	0.1	NA	intron (NM_001346222, intron 1 of 9)	(AATTT)n|Simple_repeat|Simple_repeat	9360	NM_001346223	3560	Hs.474787	NM_000878	ENSG00000100385	IL2RB	CD122|IL15RB|P70-75	interleukin 2 receptor subunit beta	protein-coding
20.0333-4	chr15	25451957	25452408	+	0.1	NA	Intergenic	L1MEg|LINE|L1	-13126	NM_000462	7337	Hs.598862	NM_000462	ENSG00000114062	UBE3A	ANCR|AS|E6-AP|EPVE6AP|HPVE6A	ubiquitin protein ligase E3A	protein-coding
17.8-5	chr11	91475958	91476226	+	0.1	NA	Intergenic	L1PA15|LINE|L1	-606890	NR_031663	100302228		NR_031663	ENSG00000221586	MIR1261	MIRN1261|hsa-mir-1261	microRNA 1261	ncRNA
29.4-8	chr4	46467484	46468080	+	0.1	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-77654	NM_000807	2555	Hs.48372	NM_000807	ENSG00000151834	GABRA2	-	gamma-aminobutyric acid type A receptor alpha2 subunit	protein-coding
40.7667-3	chr4	72187628	72188555	+	0.1	NA	Intergenic	(TTTTCCTGC)n|Simple_repeat|Simple_repeat	148959	NM_053036	10886	Hs.99231	NM_004885	ENSG00000056291	NPFFR2	GPR74|HLWAR77|NPFF2|NPGPR	neuropeptide FF receptor 2	protein-coding
17.9667-7	chr3	62336118	62336298	+	0.1	NA	TTS (NM_001291942)	TTS (NM_001291942)	17186	NM_001291942	57415	Hs.47166	NM_020685	ENSG00000114405	C3orf14	HT021	chromosome 3 open reading frame 14	protein-coding
20.0667-10	chr4	61961690	61961971	+	0.1	NA	intron (NM_001371343, intron 16 of 23)	intron (NM_001371343, intron 16 of 23)	199935	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
20.8667-6	chr15	48077604	48077885	+	0.1	NA	Intergenic	Intergenic	-43246	NM_205850	283652	Hs.710240	NM_205850	ENSG00000188467	SLC24A5	JSX|NCKX5|OCA6|SHEP4	solute carrier family 24 member 5	protein-coding
37.7333-4	chr8	102666032	102666773	+	0.1	NA	TTS (NR_160673)	TTS (NR_160673)	10154	NR_160673	101927245		NR_160672		LOC101927245	-	uncharacterized LOC101927245	ncRNA
37.1333-3	chr10	74465309	74465747	+	0.1	NA	intron (NM_001369124, intron 6 of 9)	L2a|LINE|L2	63796	NR_120673	102723439		NR_120673		LOC102723439	-	uncharacterized LOC102723439	ncRNA
20.5333-10	chr3	171389997	171390320	+	0.1	NA	intron (NM_001161563, intron 1 of 31)	intron (NM_001161563, intron 1 of 31)	70247	NM_015028	23043	Hs.34024	NM_015028	ENSG00000154310	TNIK	MRT54	TRAF2 and NCK interacting kinase	protein-coding
13.1333-6	chr2	80141358	80141489	+	0.1	NA	intron (NM_001282598, intron 7 of 17)	intron (NM_001282598, intron 7 of 17)	163329	NM_178839	347730	Hs.591580	NM_178839	ENSG00000162951	LRRTM1	-	leucine rich repeat transmembrane neuronal 1	protein-coding
13.6333-2	chr13	34943119	34943398	+	0.1	NA	intron (NM_015678, intron 1 of 57)	CpG	971	NM_015678	26960	Hs.491172	NM_015678	ENSG00000172915	NBEA	BCL8B|LYST2	neurobeachin	protein-coding
18.2667-4	chr11	63711968	63712331	+	0.1	NA	intron (NM_201429, intron 2 of 7)	intron (NM_201429, intron 2 of 7)	30649	NM_201430	10313	Hs.743229	NM_006054	ENSG00000133318	RTN3	ASYIP|HAP|NSPL2|NSPLII|RTN3-A1	reticulon 3	protein-coding
18.6667-6	chr14	74665065	74665318	+	0.1	NA	intron (NM_001039479, intron 17 of 19)	intron (NM_001039479, intron 17 of 19)	47889	NM_001039479	9870	Hs.497417	NM_014821	ENSG00000119682	AREL1	FIEL1|KIAA0317	apoptosis resistant E3 ubiquitin protein ligase 1	protein-coding
37.8333	chr1	52561707	52562120	+	0.1	NA	Intergenic	L2|LINE|L2	-8821	NM_001009881	23318	Hs.655407	NM_015269	ENSG00000134744	TUT4	PAPD3|TENT3A|ZCCHC11	terminal uridylyl transferase 4	protein-coding
15.1667-3	chr12	102585341	102585558	+	0.1	NA	Intergenic	Intergenic	-104886	NM_000618	3479	Hs.160562	NM_000618	ENSG00000017427	IGF1	IGF|IGF-I|IGFI|MGF	insulin like growth factor 1	protein-coding
19.4667-6	chrX	19099161	19099588	+	0.1	NA	intron (NM_001184833, intron 1 of 27)	MER94|DNA|hAT-Blackjack	23094	NM_001184837	10149	Hs.146978	NM_005756	ENSG00000173698	ADGRG2	CBAVDX|EDDM6|GPR64|HE6|TM7LN2	adhesion G protein-coupled receptor G2	protein-coding
24.6333-4	chr3	14772669	14772993	+	0.1	NA	exon (NM_032137, exon 17 of 17)	exon (NM_032137, exon 17 of 17)	38583	NR_135245	152274	Hs.434128	NR_135245	ENSG00000260902	LINC02011	-	long intergenic non-protein coding RNA 2011	ncRNA
10.2667-7	chr5	149188489	149188722	+	0.1	NA	intron (NM_001370418, intron 2 of 18)	MLT1A|LTR|ERVL-MaLR	46874	NM_001301015	22885	Hs.49688	NM_014945	ENSG00000173210	ABLIM3	HMFN1661	actin binding LIM protein family member 3	protein-coding
19.2-2	chr10	32266291	32266708	+	0.1	NA	Intergenic	Intergenic	80659	NM_001272004	80314	Hs.167805	NM_025209	ENSG00000120616	EPC1	Epl1	enhancer of polycomb homolog 1	protein-coding
33.1-4	chr5	45005265	45005793	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	196582	NM_016640	10884	Hs.124165	NM_016640	ENSG00000112996	MRPS30	MRP-S30|PAP|PDCD9|S30mt	mitochondrial ribosomal protein S30	protein-coding
43.1667-3	chr8	129514421	129515169	+	0.1	NA	intron (NR_130917, intron 1 of 3)	intron (NR_130917, intron 1 of 3)	-30653	NR_037457	100500839		NR_037457	ENSG00000263763	MIR3686	-	microRNA 3686	ncRNA
30.9333-8	chr6	165858137	165858714	+	0.1	NA	Intergenic	Intergenic	-129126	NR_027284	441177	Hs.708964	NM_001013720	ENSG00000281832	LINC00602	-	long intergenic non-protein coding RNA 602	ncRNA
18.1-12	chr5	158416664	158416855	+	0.1	NA	Intergenic	Intergenic	-6986	NR_109888	101927697	Hs.483960	NR_109888	ENSG00000276778	LINC02227	-	long intergenic non-protein coding RNA 2227	ncRNA
24.7667-10	chr8	127211890	127212414	+	0.1	NA	intron (NR_108049, intron 1 of 1)	AluJb|SINE|Alu	7116	NR_108049	100507056	Hs.343864	NR_108049		CCAT1	CARLO5|CARLo-5|onco-lncRNA-40	colon cancer associated transcript 1	ncRNA
26.2-21	chr7	64675117	64675466	+	0.1	NA	intron (NM_016220, intron 2 of 6)	L1PA15|LINE|L1	-3773	NR_106898	102465505		NR_106898	ENSG00000275667	MIR6839	hsa-mir-6839	microRNA 6839	ncRNA
26.7667-2	chr10	67341242	67341778	+	0.1	NA	intron (NM_001127384, intron 5 of 17)	L1MA2|LINE|L1	61900	NR_106973	102466814		NR_106973	ENSG00000276866	MIR7151	hsa-mir-7151	microRNA 7151	ncRNA
25.9333-6	chr6	69116809	69117190	+	0.1	NA	intron (NM_001704, intron 17 of 31)	intron (NM_001704, intron 17 of 31)	481717	NM_001704	577	Hs.13261	NM_001704	ENSG00000135298	ADGRB3	BAI3	adhesion G protein-coupled receptor B3	protein-coding
20.9667-12	chr3	182498206	182498528	+	0.1	NA	TTS (NR_134941)	TTS (NR_134941)	8757	NR_134941	105374244	Hs.130176	NR_134941	ENSG00000244247	LINC01995	-	long intergenic non-protein coding RNA 1995	ncRNA
24.4666-4	chr3	189538895	189539484	+	0.1	NA	Intergenic	L1ME3Cz|LINE|L1	-57557	NM_001329964	8626	Hs.137569	NM_003722	ENSG00000073282	TP63	AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L	tumor protein p63	protein-coding
27.2667-3	chr13	88436886	88437428	+	0.1	NA	Intergenic	L1MA9|LINE|L1	-103672	NR_047021	100874168	Hs.126406	NR_047021		LINC00433	-	long intergenic non-protein coding RNA 433	ncRNA
24.4333-7	chr8	117853963	117854388	+	0.1	NA	intron (NM_000127, intron 1 of 10)	intron (NM_000127, intron 1 of 10)	66738	NR_145799	109623457		NR_145799		SNORD168	-	small nucleolar RNA, C/D box 168	snoRNA
29.7-14	chr8	62010275	62010694	+	0.1	NA	Intergenic	L2|LINE|L2	120645	NR_149085	111082988	Hs.521600	NR_149085	ENSG00000254120	LINC02155	-	long intergenic non-protein coding RNA 2155	ncRNA
16.3667-2	chr15	80814754	80815112	+	0.1	NA	intron (NM_018689, intron 1 of 28)	AluSx|SINE|Alu	27140	NR_030393	693132		NR_030393	ENSG00000208003	MIR549A	MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a	microRNA 549a	ncRNA
34.4333-3	chr10	125005965	125006583	+	0.1	NA	promoter-TSS (NM_001363508)	promoter-TSS (NM_001363508)	-256	NM_001363508	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding
21.8667-8	chr3	38377771	38378056	+	0.1	NA	intron (NR_146068, intron 11 of 16)	MIRb|SINE|MIR	31128	NM_005108	9942	Hs.659985	NM_005108	ENSG00000093217	XYLB	-	xylulokinase	protein-coding
14.5-6	chr2	62666524	62666717	+	0.1	NA	Intergenic	MamRTE1|LINE|RTE-BovB	-7258	NM_001142615	23301	Hs.271667	NM_015252	ENSG00000115504	EHBP1	HPC12|NACSIN	EH domain binding protein 1	protein-coding
20.7333-14	chr3	195440569	195440868	+	0.1	NA	intron (NM_012287, intron 1 of 22)	intron (NM_012287, intron 1 of 22)	2302	NM_012287	23527	Hs.593373	NM_012287	ENSG00000114331	ACAP2	CENTB2|CNT-B2	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	protein-coding
22.0667-8	chr5	147066436	147066720	+	0.1	NA	intron (NM_181677, intron 2 of 10)	intron (NM_181677, intron 2 of 10)	-10441	NM_181676	5521	Hs.627618	NM_181674	ENSG00000156475	PPP2R2B	B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12	protein phosphatase 2 regulatory subunit Bbeta	protein-coding
25.7333-9	chr4	38862164	38862670	+	0.1	NA	Intergenic	AluSz6|SINE|Alu	-5389	NM_001350633	92689	Hs.476517	NM_138389	ENSG00000197712	FAM114A1	Noxp20	family with sequence similarity 114 member A1	protein-coding
18.0333-4	chr14	23128453	23128778	+	0.1	NA	intron (NR_049767, intron 5 of 6)	intron (NR_049767, intron 5 of 6)	-9004	NM_001805	1053	Hs.558308	NM_001805	ENSG00000092067	CEBPE	C/EBP-epsilon|CRP1	CCAAT enhancer binding protein epsilon	protein-coding
22.3333-5	chr11	134332980	134333465	+	0.1	NA	intron (NM_001370461, intron 1 of 18)	intron (NM_001370461, intron 1 of 18)	1234	NM_001370462	89944	Hs.436178	NM_138342	ENSG00000149328	GLB1L2	MST114|MSTP114	galactosidase beta 1 like 2	protein-coding
20.5-11	chr6	9546993	9547471	+	0.1	NA	Intergenic	Intergenic	-857270	NR_145448	109729173		NR_145448	ENSG00000285278	TFAP2A-AS2	HIPSTR	TFAP2A antisense RNA 2	ncRNA
10.6333-3	chr11	26567453	26567626	+	0.1	NA	intron (NM_001135091, intron 1 of 4)	intron (NM_001135091, intron 1 of 4)	4724	NM_001135092	143662	Hs.407152	NM_145650	ENSG00000169550	MUC15	MUC-15|PAS3|PASIII	mucin 15, cell surface associated	protein-coding
11.5-14	chr8	89294688	89294947	+	0.1	NA	Intergenic	MLT1A|LTR|ERVL-MaLR	462894	NR_125822	101929709	Hs.651324	NR_125822	ENSG00000251136	LOC101929709	-	uncharacterized LOC101929709	ncRNA
28.1667-2	chr10	71028729	71029226	+	0.1	NA	Intergenic	Intergenic	89924	NR_134314	105378349	Hs.119164	NR_134313	ENSG00000259267	LINC02622	-	long intergenic non-protein coding RNA 2622	ncRNA
24.3333-13	chr9	125475916	125476169	+	0.1	NA	intron (NM_001006619, intron 8 of 10)	intron (NM_001006619, intron 8 of 10)	214216	NM_001354301	26130	Hs.42376	NM_015635	ENSG00000165219	GAPVD1	GAPEX5|GAPex-5|RAP6	GTPase activating protein and VPS9 domains 1	protein-coding
38.9333-5	chr14	96187209	96187947	+	0.1	NA	Intergenic	Intergenic	-17220	NM_000623	624	Hs.654542	NM_000623	ENSG00000168398	BDKRB2	B2R|BK-2|BK2|BKR2|BRB2	bradykinin receptor B2	protein-coding
12.4667-5	chr5	78369638	78369805	+	0.1	NA	intron (NM_001290229, intron 1 of 7)	intron (NM_001290229, intron 1 of 7)	9104	NM_001290229	9522	Hs.482587	NM_004866	ENSG00000085365	SCAMP1	SCAMP|SCAMP37	secretory carrier membrane protein 1	protein-coding
25.2667-13	chr7	33568063	33568494	+	0.1	NA	intron (NR_145411, intron 22 of 23)	L2c|LINE|L2	-336637	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
29.4333-4	chr17	65238925	65239379	+	0.1	NA	Intergenic	Intergenic	101782	NM_001081955	8787	Hs.664380	NM_003835	ENSG00000108370	RGS9	PERRS|RGS9L	regulator of G protein signaling 9	protein-coding
14.6-2	chr11	3072405	3072641	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-15100	NM_001014437	833	Hs.274873	NM_001751	ENSG00000110619	CARS	CARS1|CYSRS|MGC:11246	cysteinyl-tRNA synthetase	protein-coding
15.2333-9	chr9	129356087	129356259	+	0.1	NA	Intergenic	MER103C|DNA|hAT-Charlie	19250	NR_120686	100506119	Hs.624047	NR_120685	ENSG00000233901	LINC01503	-	long intergenic non-protein coding RNA 1503	ncRNA
32.1667-4	chr14	52518523	52519043	+	0.1	NA	intron (NM_001160047, intron 7 of 20)	intron (NM_001160047, intron 7 of 20)	33722	NM_020784	57544	Hs.532609	NM_020784	ENSG00000087301	TXNDC16	ERp90|KIAA1344	thioredoxin domain containing 16	protein-coding
19.8333-9	chr2	206380380	206380834	+	0.1	NA	Intergenic	Intergenic	-62925	NM_003812	8745	Hs.370287	NM_003812	ENSG00000114948	ADAM23	MDC-3|MDC3	ADAM metallopeptidase domain 23	protein-coding
20.8-4	chr10	25361561	25361910	+	0.1	NA	intron (NM_020752, intron 2 of 10)	L1MB2|LINE|L1	-185459	NR_027333	100128811	Hs.700407	NR_027333	ENSG00000233642	GPR158-AS1	-	GPR158 antisense RNA 1	ncRNA
31.2667-8	chr5	4424137	4424664	+	0.1	NA	Intergenic	Intergenic	-349081	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA
19.2667-4	chr14	54184041	54184437	+	0.1	NA	Intergenic	Intergenic	-212629	NM_001330173	1033	Hs.84113	NM_005192	ENSG00000100526	CDKN3	CDI1|CIP2|KAP|KAP1	cyclin dependent kinase inhibitor 3	protein-coding
14.4-3	chr1	45829487	45829749	+	0.1	NA	intron (NM_001324320, intron 3 of 29)	intron (NM_001324320, intron 3 of 29)	26005	NM_001319245	23139	Hs.319481	NM_015112	ENSG00000086015	MAST2	MAST205|MTSSK	microtubule associated serine/threonine kinase 2	protein-coding
13.8667	chr1	42347985	42348234	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-12229	NM_001198850	22887	Hs.26023	NM_014947	ENSG00000198815	FOXJ3	-	forkhead box J3	protein-coding
26.1-9	chr2	182634964	182635579	+	0.1	NA	Intergenic	Intergenic	-80986	NR_073367	54431	Hs.516632	NM_018981	ENSG00000077232	DNAJC10	ERdj5|JPDI|MTHr|PDIA19	DnaJ heat shock protein family (Hsp40) member C10	protein-coding
21.0333-8	chr18	3726076	3726635	+	0.1	NA	intron (NM_001308390, intron 4 of 10)	intron (NM_001308390, intron 4 of 10)	119003	NM_001242765	9229	Hs.594640	NM_004746	ENSG00000170579	DLGAP1	DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1	DLG associated protein 1	protein-coding
15.9-9	chr3	102630631	102630922	+	0.1	NA	Intergenic	MER21C|LTR|ERVL	195761	NM_175056	131368	Hs.352213	NM_175056	ENSG00000170044	ZPLD1	-	zona pellucida like domain containing 1	protein-coding
29.5667-6	chr2	113362280	113363025	+	0.1	NA	Intergenic	Intergenic	-75039	NM_001330336	150472	Hs.531330	NM_172003	ENSG00000136682	CBWD2	-	COBW domain containing 2	protein-coding
27.3667-4	chr12	127604964	127605289	+	0.1	NA	Intergenic	L1PREC2|LINE|L1	31341	NR_120451	101927637	Hs.170413	NR_120451	ENSG00000256022	LINC02411	-	long intergenic non-protein coding RNA 2411	ncRNA
17.9333-7	chr2	213324685	213324910	+	0.1	NA	intron (NR_047660, intron 4 of 14)	L1ME2z|LINE|L1	40333	NM_024532	79582	Hs.743365	NM_024532	ENSG00000144451	SPAG16	PF20|WDR29	sperm associated antigen 16	protein-coding
21.2333-14	chr9	26988967	26989290	+	0.1	NA	intron (NM_001099224, intron 7 of 13)	intron (NM_001099224, intron 7 of 13)	16544	NM_022901	64922	Hs.128071	NM_022901	ENSG00000184434	LRRC19	-	leucine rich repeat containing 19	protein-coding
14.2-5	chr3	29915647	29915953	+	0.1	NA	intron (NM_001003793, intron 10 of 14)	intron (NM_001003793, intron 10 of 14)	18356	NR_046556	100873977	Hs.581453	NR_046556	ENSG00000235593	RBMS3-AS1	-	RBMS3 antisense RNA 1	ncRNA
15.2667-4	chr15	91913293	91913642	+	0.1	NA	intron (NR_135775, intron 1 of 10)	MER5B|DNA|hAT-Charlie	59163	NR_135775	28232	Hs.311187	NM_013272	ENSG00000176463	SLCO3A1	OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11	solute carrier organic anion transporter family member 3A1	protein-coding
18.3-7	chr4	65215441	65215777	+	0.1	NA	Intergenic	Intergenic	-211109	NR_033976	401134	Hs.165899	NR_033976	ENSG00000250125	LINC02232	-	long intergenic non-protein coding RNA 2232	ncRNA
21.1333-2	chr1	82941400	82941848	+	0.1	NA	intron (NR_147074, intron 2 of 10)	intron (NR_147074, intron 2 of 10)	38441	NR_147074	103283057	Hs.551280	NR_147074	ENSG00000230817	LINC01362	-	long intergenic non-protein coding RNA 1362	ncRNA
31.3333-7	chr3	153813019	153813601	+	0.1	NA	Intergenic	L1ME2|LINE|L1	-50784	NR_146713	105374165	Hs.637991	NR_146713		LINC02006	-	long intergenic non-protein coding RNA 2006	ncRNA
19.5-6	chr12	81343433	81343791	+	0.1	NA	intron (NM_001282536, intron 16 of 29)	L3|LINE|CR1	25757	NM_001220479	8499	Hs.506216	NM_003625	ENSG00000139220	PPFIA2	-	PTPRF interacting protein alpha 2	protein-coding
20.8-5	chr11	116080369	116080697	+	0.1	NA	Intergenic	L2a|LINE|L2	-320333	NR_034148	283143	Hs.130499	NR_034148		LINC00900	-	long intergenic non-protein coding RNA 900	ncRNA
28.4667-10	chr4	173440114	173440620	+	0.1	NA	intron (NM_001329597, intron 2 of 3)	intron (NM_001329597, intron 2 of 3)	-41251	NM_007281	11341	Hs.7122	NM_007281	ENSG00000164106	SCRG1	SCRG-1	stimulator of chondrogenesis 1	protein-coding
36.4667	chr10	69442893	69443650	+	0.1	NA	Intergenic	AluSc8|SINE|Alu	-8194	NM_012339	23555	Hs.499941	NM_012339	ENSG00000099282	TSPAN15	2700063A19Rik|NET-7|NET7|TM4SF15	tetraspanin 15	protein-coding
21.6333-8	chr3	103385215	103385474	+	0.1	NA	Intergenic	Intergenic	138772	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
19.9333	chr1	94363647	94363870	+	0.1	NA	Intergenic	L1MD2|LINE|L1	-54619	NM_001122674	5825	Hs.700576	NM_002858	ENSG00000117528	ABCD3	ABC43|CBAS5|PMP70|PXMP1|ZWS2	ATP binding cassette subfamily D member 3	protein-coding
22.3-10	chr7	70969548	70969941	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-162400	NM_022479	64409	Hs.488591	NM_022479	ENSG00000185274	GALNT17	GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17	polypeptide N-acetylgalactosaminyltransferase 17	protein-coding
20.3-10	chr2	209042615	209042911	+	0.1	NA	Intergenic	Intergenic	-381284	NM_001039538	4133	Hs.368281	NM_002374	ENSG00000078018	MAP2	MAP-2|MAP2A|MAP2B|MAP2C	microtubule associated protein 2	protein-coding
5.86666	chr7	14499779	14499918	+	0.1	NA	intron (NM_001350717, intron 19 of 24)	intron (NM_001350717, intron 19 of 24)	341602	NM_145695	1607	Hs.567255	NM_004080	ENSG00000136267	DGKB	DAGK2|DGK|DGK-BETA	diacylglycerol kinase beta	protein-coding
12.8667-4	chr3	84396187	84396382	+	0.1	NA	Intergenic	Intergenic	473291	NR_033860	440970	Hs.411049	NR_033860	ENSG00000242641	LINC00971	-	long intergenic non-protein coding RNA 971	ncRNA
38.5667-4	chr3	3134017	3134455	+	0.1	NA	intron (NR_159939, intron 2 of 6)	intron (NR_159939, intron 2 of 6)	7296	NR_159936	51095	Hs.732725	NM_016000	ENSG00000072756	TRNT1	CCA1|CGI-47|MtCCA|RPEM|SIFD	tRNA nucleotidyl transferase 1	protein-coding
23.1333-8	chr5	88188237	88188658	+	0.1	NA	3' UTR (NM_001349407, exon 15 of 15)	3' UTR (NM_001349407, exon 15 of 15)	80398	NM_001289007	153396	Hs.379972	NM_153354	ENSG00000164180	TMEM161B	FLB3342|PRO1313	transmembrane protein 161B	protein-coding
34.0333-2	chr1	175064540	175065004	+	0.1	NA	Intergenic	Intergenic	-3061	NM_022093	63923	Hs.156369	NM_022093	ENSG00000120332	TNN	TN-W	tenascin N	protein-coding
12.0667-9	chr21	28553562	28553721	+	0.1	NA	Intergenic	Intergenic	14323	NR_026553	118421	Hs.438549	NR_026552	ENSG00000226935	LINC00161	C21orf100|Linc-USP16|NCRNA00161	long intergenic non-protein coding RNA 161	ncRNA
15.0667-10	chr2	110992562	110992885	+	0.1	NA	intron (NM_001371254, intron 14 of 18)	intron (NM_001371254, intron 14 of 18)	122865	NR_122074	400997	Hs.652337	NR_122074	ENSG00000204581	ACOXL-AS1	-	ACOXL antisense RNA 1	ncRNA
40.4333-2	chr11	97034887	97035499	+	0.1	NA	Intergenic	Intergenic	526768	NR_135097	105369443	Hs.599377	NR_135097	ENSG00000256684	LINC02737	-	long intergenic non-protein coding RNA 2737	ncRNA
13.2667-2	chr14	73877873	73878140	+	0.1	NA	intron (NM_001371328, intron 5 of 8)	AluJr4|SINE|Alu	-8853	NM_001242928	57862	Hs.270869	NM_021188	ENSG00000119725	ZNF410	APA-1|APA1	zinc finger protein 410	protein-coding
12.1667	chr10	76704100	76704272	+	0.1	NA	Intergenic	L1M1|LINE|L1	-183858	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA
41.7-9	chrUn_KI270442v1	31491	32056	+	0.1	NA	NA	(TGGAA)n|Simple_repeat|Simple_repeat	NA	NA								
24.2667-11	chr6	120076500	120076885	+	0.1	NA	Intergenic	Intergenic	61513	NR_036098	100422951		NR_036098	ENSG00000265725	MIR3144	mir-3144	microRNA 3144	ncRNA
13.2-12	chr5	30520872	30521119	+	0.1	NA	Intergenic	Charlie17|DNA|hAT-Charlie	640435	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
22.6667-2	chr11	121806541	121807032	+	0.1	NA	Intergenic	Intergenic	293058	NR_029671	406911		NR_029671	ENSG00000207971	MIR125B1	MIRN125B1|mir-125b-1	microRNA 125b-1	ncRNA
36.2667-5	chr3	138820540	138821090	+	0.1	NA	intron (NM_006219, intron 1 of 23)	L1ME4b|LINE|L1	14113	NM_006219	5291	Hs.239818	NM_006219	ENSG00000051382	PIK3CB	P110BETA|PI3K|PI3KBETA|PIK3C1	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta	protein-coding
34.5667-5	chr4	2074468	2075119	+	0.1	NA	intron (NM_181808, intron 24 of 25)	intron (NM_181808, intron 24 of 25)	15466	NM_178557	339983	Hs.318529	NM_178557	ENSG00000185818	NAT8L	CML3|NACED|NAT8-LIKE	N-acetyltransferase 8 like	protein-coding
42.1-4	chr6	52410605	52411057	+	0.1	NA	Intergenic	L2a|LINE|L2	-9511	NM_018100	114327	Hs.403171	NM_018100	ENSG00000096093	EFHC1	EJM1|dJ304B14.2	EF-hand domain containing 1	protein-coding
12.8333-4	chr13	98357517	98357718	+	0.1	NA	intron (NM_005766, intron 3 of 26)	L1MEc|LINE|L1	149093	NR_036129	100422881		NR_036129	ENSG00000263399	MIR3170	mir-3170	microRNA 3170	ncRNA
17.8333-13	chr8	86548567	86548794	+	0.1	NA	intron (NM_003909, intron 12 of 16)	intron (NM_003909, intron 12 of 16)	34245	NM_003909	8895	Hs.191219	NM_003909	ENSG00000085719	CPNE3	CPN3|PRO1071	copine 3	protein-coding
16.1667-15	chr8	88992398	88992686	+	0.1	NA	Intergenic	MER68B|LTR|ERVL	-665059	NM_005941	4325	Hs.492187	NM_005941	ENSG00000156103	MMP16	C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP	matrix metallopeptidase 16	protein-coding
11-9	chr4	30314246	30314372	+	0.1	NA	Intergenic	Intergenic	-406060	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
33.7-4	chr12	93447592	93448033	+	0.1	NA	Intergenic	Intergenic	-5865	NM_003348	7334	Hs.524630	NM_003348	ENSG00000177889	UBE2N	HEL-S-71|UBC13|UBCHBEN; UBC13|UbcH-ben|UbcH13	ubiquitin conjugating enzyme E2 N	protein-coding
14.0333-6	chr6	22722511	22722737	+	0.1	NA	Intergenic	AluJr|SINE|Alu	-4700	NR_134614	105374972	Hs.484889	NR_134613		LOC105374972	-	uncharacterized LOC105374972	ncRNA
17.9-7	chr2	240464010	240464281	+	0.1	NA	intron (NM_002081, intron 4 of 8)	intron (NM_002081, intron 4 of 8)	-7445	NR_161169	100130449	Hs.655753	NR_024014		LOC100130449	-	uncharacterized LOC100130449	ncRNA
10.1333-4	chr3	135308917	135309018	+	0.1	NA	Intergenic	(GT)n|Simple_repeat|Simple_repeat	513707	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding
23.7333-6	chr4	63472162	63472433	+	0.1	NA	Intergenic	ERVL-B4-int|LTR|ERVL	937153	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
14.4	chr1	11174070	11174239	+	0.1	NA	intron (NM_004958, intron 28 of 57)	intron (NM_004958, intron 28 of 57)	-15201	NM_021146	10218	Hs.146559	NM_021146	ENSG00000171819	ANGPTL7	AngX|CDT6|dJ647M16.1	angiopoietin like 7	protein-coding
14.9-7	chr21	45671502	45671672	+	0.1	NA	intron (NM_001348238, intron 2 of 16)	intron (NM_001348238, intron 2 of 16)	2713	NM_001348241	54039	Hs.474049	NM_020528	ENSG00000183570	PCBP3	ALPHA-CP3|PCBP3-OT1|PCBP3OT	poly(rC) binding protein 3	protein-coding
17.6-9	chr18	64842093	64842269	+	0.1	NA	Intergenic	L1MEg|LINE|L1	-582126	NR_033983	400654	Hs.434235	NR_033983	ENSG00000266952	LINC01538	-	long intergenic non-protein coding RNA 1538	ncRNA
16.8333-4	chr16	21203399	21203645	+	0.1	NA	intron (NM_003460, intron 10 of 19)	intron (NM_003460, intron 10 of 19)	10988	NM_003460	7783	Hs.73982	NM_003460	ENSG00000103310	ZP2	OOMD6|ZPA|Zp-2	zona pellucida glycoprotein 2	protein-coding
9.66667-3	chr7	83126837	83127010	+	0.1	NA	intron (NM_033026, intron 3 of 24)	L1MC4a|LINE|L1	35961	NM_014510	27445	Hs.12376	NM_014510	ENSG00000186472	PCLO	ACZ|PCH3	piccolo presynaptic cytomatrix protein	protein-coding
20.5333-2	chr1	57851384	57851751	+	0.1	NA	intron (NM_001353980, intron 3 of 5)	intron (NM_001353980, intron 3 of 5)	-9014	NR_104362	101926890	Hs.662207	NR_104362	ENSG00000226759	DAB1-AS1	-	DAB1 antisense RNA 1	ncRNA
25.6333-3	chr11	128531671	128532079	+	0.1	NA	intron (NM_001143820, intron 3 of 9)	intron (NM_001143820, intron 3 of 9)	5733	NR_120581	101929517	Hs.562320	NR_120581	ENSG00000254588	ETS1-AS1	pancEts-1	ETS1 antisense RNA 1	ncRNA
41.6-3	chr14	101995243	101996058	+	0.1	NA	intron (NM_001376, intron 15 of 77)	intron (NM_001376, intron 15 of 77)	31077	NM_001376	1778	Hs.614080	NM_001376	ENSG00000197102	DYNC1H1	CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22	dynein cytoplasmic 1 heavy chain 1	protein-coding
24.4333-5	chr7	1616964	1617457	+	0.1	NA	TTS (NR_001288)	TTS (NR_001288)	2740	NR_001288	260341	Hs.534596	NR_001288		TFAMP1	MTTF1|TCF6L1	transcription factor A, mitochondrial pseudogene 1	pseudo
18.5333-14	chr2	22878379	22878670	+	0.1	NA	Intergenic	Intergenic	342045	NR_110577	102723362	Hs.502887	NR_110577	ENSG00000233587	LINC01884	-	long intergenic non-protein coding RNA 1884	ncRNA
12.2-3	chr12	49212656	49212826	+	0.1	NA	Intergenic	LTR16A|LTR|ERVL	-15185	NM_001303114	84790	Hs.652390	NM_032704	ENSG00000167553	TUBA1C	TUBA6|bcm948	tubulin alpha 1c	protein-coding
35.4333	chr1	42070684	42071126	+	0.1	NA	Intergenic	Intergenic	-34971	NR_038261	59269	Hs.403972	NM_024503	ENSG00000127124	HIVEP3	KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C	human immunodeficiency virus type I enhancer binding protein 3	protein-coding
34.6667-3	chr14	47029242	47029992	+	0.1	NA	intron (NM_001113498, intron 8 of 16)	intron (NM_001113498, intron 8 of 16)	313629	NM_182830	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
39.2333-2	chr12	46337868	46338482	+	0.1	NA	Intergenic	L1MA3|LINE|L1	34598	NM_001307936	54407	Hs.221847	NM_018976	ENSG00000134294	SLC38A2	ATA2|PRO1068|SAT2|SNAT2	solute carrier family 38 member 2	protein-coding
39-9	chr3	192553828	192554485	+	0.1	NA	intron (NM_004113, intron 2 of 5)	intron (NM_004113, intron 2 of 5)	39134	NR_046598	100873987	Hs.628012	NR_046598	ENSG00000230126	FGF12-AS2	-	FGF12 antisense RNA 2	ncRNA
27.6333-4	chr14	98576242	98576836	+	0.1	NA	Intergenic	MLT2C1|LTR|ERVL	-135074	NR_161368	283598	Hs.448754	NM_182560	ENSG00000176605	C14orf177	-	chromosome 14 open reading frame 177	ncRNA
9.53334-2	chr5	125938780	125938906	+	0.1	NA	Intergenic	Intergenic	-240734	NR_105042	102546228	Hs.582529	NR_105042	ENSG00000248107	LINC02039	-	long intergenic non-protein coding RNA 2039	ncRNA
45.9-4	chr5	97194953	97195711	+	0.1	NA	Intergenic	Intergenic	-12085	NM_018343	55781	Hs.27021	NM_018343	ENSG00000058729	RIOK2	RIO2	RIO kinase 2	protein-coding
21.3667-4	chr10	79281339	79281807	+	0.1	NA	intron (NM_020338, intron 8 of 24)	intron (NM_020338, intron 8 of 24)	-65896	NM_005729	10105	Hs.381072	NM_005729	ENSG00000108179	PPIF	CYP3|CyP-M|Cyp-D|CypD	peptidylprolyl isomerase F	protein-coding
27.3667-5	chr16	231138	231529	+	0.1	NA	Intergenic	Intergenic	-1851	NM_201412	55692	Hs.16803	NM_018032	ENSG00000007392	LUC7L	LUC7B1|Luc7|SR+89|hLuc7B1	LUC7 like	protein-coding
43.0667-6	chr15	59563904	59564572	+	0.1	NA	Intergenic	L1ME3B|LINE|L1	-47545	NM_004751	9245	Hs.194710	NM_004751	ENSG00000140297	GCNT3	C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM	glucosaminyl (N-acetyl) transferase 3, mucin type	protein-coding
14.3	chr1	20917398	20917678	+	0.1	NA	intron (NM_003760, intron 9 of 31)	L1ME1|LINE|L1	70894	NR_031657	100302155		NR_031657	ENSG00000221808	MIR1256	MIRN1256|hsa-mir-1256	microRNA 1256	ncRNA
19.1-11	chr4	38213899	38214137	+	0.1	NA	Intergenic	Intergenic	94064	NM_001253915	23216	Hs.176503	NM_015173	ENSG00000065882	TBC1D1	TBC|TBC1	TBC1 domain family member 1	protein-coding
30.7667-10	chr4	118257728	118258109	+	0.1	NA	non-coding (NR_146513, exon 14 of 14)	non-coding (NR_146513, exon 14 of 14)	-20844	NR_034010	100093630	Hs.535762	NR_003584	ENSG00000269893	SNHG8	LINC00060|NCRNA00060	small nucleolar RNA host gene 8	ncRNA
22.9666	chr1	83827234	83827826	+	0.1	NA	intron (NR_119374, intron 2 of 2)	intron (NR_119374, intron 2 of 2)	33016	NR_119374	101927560	Hs.559661	NR_119374	ENSG00000233008	LOC101927560	-	uncharacterized LOC101927560	ncRNA
39.1667-2	chr11	72208971	72209467	+	0.1	NA	Intergenic	THE1D|LTR|ERVL-MaLR	-7575	NM_001113535	2350	Hs.433159	NM_000803	ENSG00000165457	FOLR2	BETA-HFR|FBP|FBP/PL-1|FR-BETA|FR-P3|FRbeta	folate receptor beta	protein-coding
22.9333-6	chr11	82981339	82981622	+	0.1	NA	3' UTR (NM_001286060, exon 5 of 5)	3' UTR (NM_001286060, exon 5 of 5)	52794	NM_001286059	27314	Hs.40758	NM_014488	ENSG00000137502	RAB30	-	RAB30, member RAS oncogene family	protein-coding
46.1333-6	chr4	77288872	77289602	+	0.1	NA	Intergenic	Intergenic	132030	NM_004354	901	Hs.740456	NM_004354	ENSG00000138764	CCNG2	-	cyclin G2	protein-coding
9.8-5	chr3	104802588	104802706	+	0.1	NA	Intergenic	Intergenic	-564066	NM_001243281	214	Hs.591293	NM_001627	ENSG00000170017	ALCAM	CD166|MEMD	activated leukocyte cell adhesion molecule	protein-coding
8.63333	chr10	119042739	119042870	+	0.1	NA	intron (NM_003750, intron 18 of 21)	intron (NM_003750, intron 18 of 21)	13090	NM_199461	340719	Hs.591918	NM_199461	ENSG00000188613	NANOS1	EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A	nanos C2HC-type zinc finger 1	protein-coding
42.2-7	chr8	141924393	141924868	+	0.1	NA	Intergenic	Intergenic	-138317	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA
15.2-2	chr2	126423113	126423400	+	0.1	NA	Intergenic	(TATA)n|Simple_repeat|Simple_repeat	-232679	NM_001256584	2995	Hs.59138	NM_002101	ENSG00000136732	GYPC	CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2'	glycophorin C (Gerbich blood group)	protein-coding
39.2-6	chr4	185394461	185395169	+	0.1	NA	Intergenic	Intergenic	-2026	NM_181726	353322	Hs.508154	NM_181726	ENSG00000186352	ANKRD37	Lrp2bp	ankyrin repeat domain 37	protein-coding
23.3333	chr1	48559451	48559912	+	0.1	NA	intron (NM_001323575, intron 11 of 12)	intron (NM_001323575, intron 11 of 12)	-87473	NM_001286239	54558	Hs.538103	NM_019073	ENSG00000132122	SPATA6	HASH|SRF-1|SRF1	spermatogenesis associated 6	protein-coding
11.1333-4	chr7	48347880	48348074	+	0.1	NA	intron (NM_152701, intron 29 of 61)	intron (NM_152701, intron 29 of 61)	176519	NM_152701	154664	Hs.226568	NM_152701	ENSG00000179869	ABCA13	-	ATP binding cassette subfamily A member 13	protein-coding
23.6667-2	chr1	247293090	247293426	+	0.1	NA	Intergenic	Intergenic	37186	NR_160309	317705	Hs.553686	NM_173858	ENSG00000197617	VN1R5	V1RL5	vomeronasal 1 receptor 5 (gene/pseudogene)	protein-coding
23.0333-12	chr7	124690444	124690884	+	0.1	NA	Intergenic	L1MB7|LINE|L1	75128	NM_005302	2861	Hs.406094	NM_005302	ENSG00000170775	GPR37	EDNRBL|PAELR|hET(B)R-LP	G protein-coupled receptor 37	protein-coding
18.0333-2	chr1	174416034	174416398	+	0.1	NA	intron (NM_001366446, intron 13 of 25)	intron (NM_001366446, intron 13 of 25)	-31748	NM_005684	9293	Hs.673850	NM_005684	ENSG00000203737	GPR52	-	G protein-coupled receptor 52	protein-coding
23.1667	chr15	48220986	48221398	+	0.1	NA	intron (NM_001184832, intron 4 of 26)	intron (NM_001184832, intron 4 of 26)	14890	NM_001184832	6557	Hs.123116	NM_000338	ENSG00000074803	SLC12A1	BSC1|NKCC2	solute carrier family 12 member 1	protein-coding
27.6667-13	chr6	27209852	27210395	+	0.1	NA	Intergenic	Intergenic	-37578	NM_005865	10279	Hs.274407	NM_005865	ENSG00000112812	PRSS16	TSSP	serine protease 16	protein-coding
40.5667	chr7	45351174	45351798	+	0.1	NA	Intergenic	MIR3|SINE|MIR	193695	NM_005856	10268	Hs.25691	NM_005856	ENSG00000122679	RAMP3	-	receptor activity modifying protein 3	protein-coding
25.3333-2	chr14	37642764	37643164	+	0.1	NA	intron (NM_001310135, intron 3 of 32)	Tigger3a|DNA|TcMar-Tigger	47335	NM_001310135	319089	Hs.659936	NM_001007795	ENSG00000139865	TTC6	C14orf25|NCRNA00291	tetratricopeptide repeat domain 6	protein-coding
21.6-19	chr8	124438294	124438601	+	0.1	NA	Intergenic	Intergenic	-12373	NM_017956	55039	Hs.9925	NM_017956	ENSG00000183665	TRMT12	TRM12|TYW2	tRNA methyltransferase 12 homolog	protein-coding
26.1667-12	chr9	102645268	102645888	+	0.1	NA	intron (NR_103830, intron 4 of 4)	LTR24C|LTR|ERV1	125941	NR_103830	414319	Hs.385790	NR_103830	ENSG00000204250	LINC00587	C9orf107|bA785H23.1	long intergenic non-protein coding RNA 587	ncRNA
9.76667-2	chr6	128986029	128986126	+	0.1	NA	intron (NM_000426, intron 1 of 64)	L1MC5a|LINE|L1	102936	NM_000426	3908	Hs.200841	NM_000426	ENSG00000196569	LAMA2	LAMM|MDC1A	laminin subunit alpha 2	protein-coding
6.93333-2	chr10	122152441	122152579	+	0.1	NA	intron (NM_206862, intron 7 of 22)	intron (NM_206862, intron 7 of 22)	-11120	NM_006997	10579	Hs.501252	NM_006997	ENSG00000138162	TACC2	AZU-1|ECTACC	transforming acidic coiled-coil containing protein 2	protein-coding
25.2667-7	chr17	70285732	70286143	+	0.1	NA	Intergenic	L1MA7|LINE|L1	116402	NM_000891	3759	Hs.1547	NM_000891	ENSG00000123700	KCNJ2	ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3	potassium voltage-gated channel subfamily J member 2	protein-coding
29.3667-4	chr2	25400569	25401089	+	0.1	NA	intron (NM_001351385, intron 14 of 17)	intron (NM_001351385, intron 14 of 17)	-58239	NM_175629	1788	Hs.515840	NM_022552	ENSG00000119772	DNMT3A	DNMT3A2|M.HsaIIIA|TBRS	DNA methyltransferase 3 alpha	protein-coding
23.7-9	chr3	178712975	178713224	+	0.1	NA	intron (NM_001278911, intron 1 of 4)	intron (NM_001278911, intron 1 of 4)	147306	NR_126561	104797538	Hs.478363	NR_126560		KCNMB2-AS1	-	KCNMB2 antisense RNA 1	ncRNA
35.7-6	chr18	60241104	60241676	+	0.1	NA	Intergenic	L1PREC2|LINE|L1	131385	NM_005912	4160	Hs.532833	NM_005912	ENSG00000166603	MC4R	BMIQ20	melanocortin 4 receptor	protein-coding
22.2333-7	chr19	30637409	30637753	+	0.1	NA	intron (NM_001352260, intron 4 of 5)	intron (NM_001352260, intron 4 of 5)	265197	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding
21.9333-11	chr20	41562673	41562964	+	0.1	NA	intron (NM_032221, intron 1 of 36)	intron (NM_032221, intron 1 of 36)	55559	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding
20.8667-2	chr10	34372547	34373035	+	0.1	NA	intron (NM_001184787, intron 11 of 23)	intron (NM_001184787, intron 11 of 23)	442505	NM_001184794	56288	Hs.131489	NM_019619	ENSG00000148498	PARD3	ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2	par-3 family cell polarity regulator	protein-coding
22.1667-5	chr21	29513880	29514358	+	0.1	NA	Intergenic	MER61E|LTR|ERV1	18072	NR_146594	54147	Hs.124532	NR_146594	ENSG00000234293	BACH1-IT3	C21orf8|NCRNA00097	BACH1 intronic transcript 3	ncRNA
17.7333	chr1	58983683	58983903	+	0.1	NA	Intergenic	Intergenic	-36683	NR_110626	101926925		NR_110626		LINC01358	-	long intergenic non-protein coding RNA 1358	ncRNA
28.9-6	chr14	52599446	52600064	+	0.1	NA	intron (NM_001353361, intron 2 of 7)	intron (NM_001353361, intron 2 of 7)	46919	NM_001099652	283554	Hs.416214	NM_001099652	ENSG00000180998	GPR137C	TM7SF1L2	G protein-coupled receptor 137C	protein-coding
36.2667-4	chr2	166217007	166217517	+	0.1	NA	intron (NM_001365536, intron 24 of 26)	L1MA8|LINE|L1	-68101	NM_001353958	6323	Hs.22654	NM_006920	ENSG00000144285	SCN1A	EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI	sodium voltage-gated channel alpha subunit 1	protein-coding
18.4333	chr1	158445310	158445601	+	0.1	NA	Intergenic	Intergenic	-20107	NM_001004473	391109	Hs.690410	NM_001004473	ENSG00000173285	OR10K1	OR1-6	olfactory receptor family 10 subfamily K member 1	protein-coding
14.8333-2	chr10	35449383	35449587	+	0.1	NA	intron (NM_001282853, intron 2 of 10)	L2a|LINE|L2	112611	NM_001282853	219771	Hs.14745	NM_145012	ENSG00000108100	CCNY	C10orf9|CBCP1|CCNX|CFP1	cyclin Y	protein-coding
19.0333-10	chr4	15246363	15246615	+	0.1	NA	intron (NR_125911, intron 2 of 5)	MIRb|SINE|MIR	-93499	NM_001135170	114905	Hs.153714	NM_031911	ENSG00000163145	C1QTNF7	CTRP7|ZACRP7	C1q and TNF related 7	protein-coding
15.9333-4	chr13	58519319	58519549	+	0.1	NA	Intergenic	Intergenic	-286317	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA
36.8667-8	chr9	32325045	32325471	+	0.1	NA	Intergenic	AluSp|SINE|Alu	-59345	NM_001278352	48	Hs.567229	NM_002197	ENSG00000122729	ACO1	ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1	aconitase 1	protein-coding
32.5-4	chr13	69771462	69771995	+	0.1	NA	intron (NM_001286725, intron 6 of 9)	intron (NM_001286725, intron 6 of 9)	-335485	NR_002717	6315	Hs.676453	NR_002717		ATXN8OS	KLHL1AS|NCRNA00003|SCA8	ATXN8 opposite strand lncRNA	ncRNA
24.7333-10	chr4	94197066	94197385	+	0.1	NA	intron (NR_125922, intron 1 of 8)	intron (NR_125922, intron 1 of 8)	10331	NR_125922	101929210	Hs.518877	NR_125922	ENSG00000246541	LOC101929210	-	uncharacterized LOC101929210	ncRNA
23.5-9	chr19	3304567	3304995	+	0.1	NA	Intergenic	AluSz6|SINE|Alu	-54849	NM_001245005	4782	Hs.170131	NM_005597	ENSG00000141905	NFIC	CTF|CTF5|NF-I|NFI	nuclear factor I C	protein-coding
19.5333-10	chr8	84325342	84325771	+	0.1	NA	intron (NM_001354320, intron 2 of 9)	intron (NM_001354320, intron 2 of 9)	-89928	NM_001354308	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
26.8-14	chr5	168435034	168435391	+	0.1	NA	intron (NM_001161661, intron 15 of 22)	L2a|LINE|L2	-51259	NM_002887	5917	Hs.654907	NM_002887	ENSG00000113643	RARS	ArgRS|DALRD1|HLD9	arginyl-tRNA synthetase	protein-coding
17-8	chr4	91722123	91722404	+	0.1	NA	Intergenic	Intergenic	555039	NR_125920	101929194	Hs.626389	NR_125920		LNCPRESS2	-	lncRNA p53 regulated and ESC associated 2	ncRNA
22.9-5	chr12	132203788	132204138	+	0.1	NA	intron (NM_001122636, intron 6 of 10)	intron (NM_001122636, intron 6 of 10)	2065	NM_021808	50614	Hs.301062	NM_021808	ENSG00000182870	GALNT9	GALNAC-T9|GALNACT9	polypeptide N-acetylgalactosaminyltransferase 9	protein-coding
23.2-5	chr13	52829426	52829860	+	0.1	NA	Intergenic	Intergenic	18997	NM_002590	5100	Hs.19492	NM_002590	ENSG00000136099	PCDH8	ARCADLIN|PAPC	protocadherin 8	protein-coding
18.6667	chr10	52819095	52819343	+	0.1	NA	Intergenic	Intergenic	-47519	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
21.5333-7	chr9	77552575	77553067	+	0.1	NA	intron (NM_004297, intron 1 of 6)	intron (NM_004297, intron 1 of 6)	95501	NM_004297	9630	Hs.657795	NM_004297	ENSG00000156049	GNA14	-	G protein subunit alpha 14	protein-coding
22.7-11	chrX	45785358	45785697	+	0.1	NA	Intergenic	L1MB2|LINE|L1	-38403	NR_029636	407007		NR_029636	ENSG00000207725	MIR222	MIRN222|miRNA222|mir-222	microRNA 222	ncRNA
18.3333-6	chr14	66112241	66112424	+	0.1	NA	Intergenic	Intergenic	-374039	NR_024338	440184	Hs.412138	NM_001004331	ENSG00000196553	CCDC196	C14orf53|LINC00238|NCRNA00238	coiled-coil domain containing 196	protein-coding
35.5667-4	chr5	148765064	148765419	+	0.1	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-61352	NM_000024	154	Hs.2551	NM_000024	ENSG00000169252	ADRB2	ADRB2R|ADRBR|B2AR|BAR|BETA2AR	adrenoceptor beta 2	protein-coding
30.4667-3	chr1	174792843	174793218	+	0.1	NA	intron (NM_001366451, intron 3 of 12)	AluSq|SINE|Alu	-6708	NM_001366454	9910	Hs.585378	NM_014857	ENSG00000152061	RABGAP1L	HHL|TBC1D18	RAB GTPase activating protein 1 like	protein-coding
17.7333-17	chr7	120497872	120498100	+	0.1	NA	intron (NM_012281, intron 1 of 5)	intron (NM_012281, intron 1 of 5)	224811	NM_012281	3751	Hs.654739	NM_012281	ENSG00000184408	KCND2	KV4.2|RK5	potassium voltage-gated channel subfamily D member 2	protein-coding
30.6667-4	chr2	43214388	43214880	+	0.1	NA	Intergenic	Intergenic	11972	NM_006887	678	Hs.503093	NM_006887	ENSG00000152518	ZFP36L2	BRF2|ERF-2|ERF2|RNF162C|TIS11D	ZFP36 ring finger protein like 2	protein-coding
34.7667-5	chr14	43567811	43568246	+	0.1	NA	Intergenic	Intergenic	939255	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
6.66667-4	chr2	7305634	7305714	+	0.1	NA	Intergenic	L1MB3|LINE|L1	-115587	NR_038432	100506274	Hs.177930	NR_038432	ENSG00000229727	LOC100506274	-	uncharacterized LOC100506274	ncRNA
13.6333-11	chr5	4248113	4248291	+	0.1	NA	Intergenic	L1MC5a|LINE|L1	-525279	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA
6.33333	chr11	98843019	98843134	+	0.1	NA	Intergenic	L1MA3|LINE|L1	-177873	NM_014361	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
27.9-4	chr3	123777440	123777879	+	0.1	NA	intron (NM_053025, intron 4 of 33)	intron (NM_053025, intron 4 of 33)	88015	NR_046629	100873940	Hs.667316	NR_046629	ENSG00000250174	MYLK-AS2	-	MYLK antisense RNA 2	ncRNA
20.1333-3	chr12	6365149	6365442	+	0.1	NA	intron (NM_001038, intron 2 of 12)	AluJb|SINE|Alu	-9865	NM_001270987	4055	Hs.1116	NM_002342	ENSG00000111321	LTBR	D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3	lymphotoxin beta receptor	protein-coding
35.1333-8	chr6	7214477	7215174	+	0.1	NA	intron (NM_001003699, intron 8 of 12)	intron (NM_001003699, intron 8 of 12)	98374	NM_003144	6745	Hs.114033	NM_003144	ENSG00000124783	SSR1	TRAPA	signal sequence receptor subunit 1	protein-coding
13.7	chr1	114075714	114075954	+	0.1	NA	Intergenic	Intergenic	76606	NM_205848	148281	Hs.370963	NM_205848	ENSG00000134207	SYT6	sytVI	synaptotagmin 6	protein-coding
19.6	chr10	120077116	120077549	+	0.1	NA	Intergenic	Intergenic	118819	NR_039830	100616322		NR_039830	ENSG00000265370	MIR4682	-	microRNA 4682	ncRNA
13.5333-9	chr2	20309308	20309485	+	0.1	NA	intron (NM_001352930, intron 4 of 19)	intron (NM_001352930, intron 4 of 19)	17990	NM_001282790	23369	Hs.467824	NM_015317	ENSG00000055917	PUM2	PUMH2|PUML2	pumilio RNA binding family member 2	protein-coding
22.0667-4	chr2	63077287	63077532	+	0.1	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	26579	NM_014562	5013	Hs.734360	NM_014562	ENSG00000115507	OTX1	-	orthodenticle homeobox 1	protein-coding
28.3-7	chr5	78001303	78001618	+	0.1	NA	TTS (NM_003664)	TTS (NM_003664)	43213	NR_105013	101929154	Hs.252895	NR_105012		LOC101929154	-	uncharacterized LOC101929154	ncRNA
12.7333-9	chr5	11896967	11897141	+	0.1	NA	intron (NM_001288717, intron 1 of 20)	intron (NM_001288717, intron 1 of 20)	7392	NR_109988	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
11.6333-6	chr8	142419893	142420074	+	0.1	NA	Intergenic	Intergenic	-16801	NM_145003	203062	Hs.370931	NM_145003	ENSG00000171045	TSNARE1	-	t-SNARE domain containing 1	protein-coding
12.3-3	chr18	9066980	9067130	+	0.1	NA	Intergenic	Intergenic	-35644	NM_021074	4729	Hs.464572	NM_021074	ENSG00000178127	NDUFV2	CI-24k|MC1DN7	NADH:ubiquinone oxidoreductase core subunit V2	protein-coding
29.1333-9	chr7	75771613	75772171	+	0.1	NA	exon (NM_006072, exon 3 of 4)	exon (NM_006072, exon 3 of 4)	17854	NM_006072	10344	Hs.131342	NM_006072	ENSG00000006606	CCL26	IMAC|MIP-4a|MIP-4alpha|SCYA26|TSC-1	C-C motif chemokine ligand 26	protein-coding
8.6-5	chr4	46885493	46885660	+	0.1	NA	intron (NM_130902, intron 1 of 2)	intron (NM_130902, intron 1 of 2)	23669	NM_130902	170712	Hs.479656	NM_130902	ENSG00000170516	COX7B2	-	cytochrome c oxidase subunit 7B2	protein-coding
31.4667-4	chr15	34905305	34905894	+	0.1	NA	intron (NM_014691, intron 18 of 34)	MER20|DNA|hAT-Charlie	64143	NM_014691	9716	Hs.510958	NM_014691	ENSG00000021776	AQR	IBP160|fSAP164	aquarius intron-binding spliceosomal factor	protein-coding
32.4333-4	chr2	184276064	184276489	+	0.1	NA	Intergenic	Intergenic	-102699	NR_039638	100616305		NR_039638	ENSG00000266808	MIR548AE1	-	microRNA 548ae-1	ncRNA
52.6333-3	chr2	46396247	46397122	+	0.1	NA	Intergenic	L1MC3|LINE|L1	-2517	NR_146999	105374582	Hs.570163	NR_146999	ENSG00000228100	LINC01820	-	long intergenic non-protein coding RNA 1820	ncRNA
14.7-3	chr11	79094403	79094701	+	0.1	NA	intron (NM_001098816, intron 4 of 33)	intron (NM_001098816, intron 4 of 33)	307557	NR_030598	100126333		NR_030598	ENSG00000211997	MIR708	MIRN708|hsa-mir-708	microRNA 708	ncRNA
46.9667-3	chr3	89133750	89134518	+	0.1	NA	intron (NM_182644, intron 2 of 6)	HSMAR1|DNA|TcMar-Mariner	26513	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
13.8-3	chr2	37134549	37134898	+	0.1	NA	intron (NM_002759, intron 10 of 16)	HERVFH19-int|LTR|ERV1	13099	NM_001135652	5610	Hs.131431	NM_002759	ENSG00000055332	EIF2AK2	EIF2AK1|PKR|PPP1R83|PRKR	eukaryotic translation initiation factor 2 alpha kinase 2	protein-coding
39.6333-2	chr14	32201592	32202097	+	0.1	NA	promoter-TSS (NR_004394).3	promoter-TSS (NR_004394).3	-201	NR_004394	26827		NR_004394	ENSG00000206625	RNU6-1	RNU6|RNU6A|U6|U6-1	RNA, U6 small nuclear 1	snRNA
14.9	chr1	88080062	88080316	+	0.1	NA	Intergenic	Intergenic	-603955	NM_001320707	5586	Hs.440833	NM_006256	ENSG00000065243	PKN2	PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7	protein kinase N2	protein-coding
27.2333-6	chr5	2657400	2658088	+	0.1	NA	Intergenic	Intergenic	-54847	NR_145480	101234261		NR_145480	ENSG00000281560	LSINCT5	-	long stress-induced non-coding transcript 5	ncRNA
18.9667-12	chr8	144134392	144134601	+	0.1	NA	Intergenic	MLT1A|LTR|ERVL-MaLR	-3278	NM_016458	51236	Hs.300224	NM_016458	ENSG00000235173	HGH1	BRP16|BRP16L|C8orf30A|C8orf30B|FAM203A|FAM203B	HGH1 homolog	protein-coding
36.5667	chr12	73485053	73485548	+	0.1	NA	Intergenic	Intergenic	326110	NR_110130	101928137	Hs.694666	NR_110130	ENSG00000258123	LINC02444	-	long intergenic non-protein coding RNA 2444	ncRNA
32.9-2	chr14	57156809	57157250	+	0.1	NA	Intergenic	Intergenic	111876	NM_006544	10640	Hs.743987	NM_006544	ENSG00000070367	EXOC5	HSEC10|PRO1912|SEC10|SEC10L1|SEC10P	exocyst complex component 5	protein-coding
23.6-15	chr4	19385212	19385701	+	0.1	NA	Intergenic	Intergenic	-866449	NM_004787	9353	Hs.29802	NM_004787	ENSG00000145147	SLIT2	SLIL3|Slit-2	slit guidance ligand 2	protein-coding
17.3667-8	chr4	71554329	71554553	+	0.1	NA	intron (NM_003759, intron 17 of 22)	intron (NM_003759, intron 17 of 22)	215388	NM_003759	8671	Hs.5462	NM_003759	ENSG00000080493	SLC4A4	HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC	solute carrier family 4 member 4	protein-coding
18.4333-7	chr20	51572637	51573087	+	0.1	NA	Intergenic	Intergenic	-10023	NM_001136021	4773	Hs.744148	NM_012340	ENSG00000101096	NFATC2	NFAT1|NFATP	nuclear factor of activated T cells 2	protein-coding
23.5-15	chr5	119351108	119351425	+	0.1	NA	intron (NM_001286814, intron 1 of 1)	AluJr4|SINE|Alu	-3507	NM_001286813	25816	Hs.618488	NM_014350	ENSG00000145779	TNFAIP8	GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2	TNF alpha induced protein 8	protein-coding
17.3667-2	chr1	85192533	85192724	+	0.1	NA	intron (NM_032184, intron 1 of 6)	L2c|LINE|L2	8388	NM_032184	84144	Hs.533853	NM_032184	ENSG00000097096	SYDE2	-	synapse defective Rho GTPase homolog 2	protein-coding
18.0667	chr1	43637073	43637300	+	0.1	NA	Intergenic	L2b|LINE|L2	-12963	NM_014663	9682	Hs.155983	NM_014663	ENSG00000066135	KDM4A	JHDM3A|JMJD2|JMJD2A|TDRD14A	lysine demethylase 4A	protein-coding
31.5667-7	chr5	15709204	15709545	+	0.1	NA	intron (NM_001278317, intron 2 of 3)	AluSx|SINE|Alu	-94372	NR_109945	101929472	Hs.662664	NR_109945		CTD-2350J17.1	-	uncharacterized LOC101929472	ncRNA
25.4333-2	chr12	116304697	116305157	+	0.1	NA	Intergenic	L2a|LINE|L2	-27741	NM_015335	23389	Hs.603766	NM_015335	ENSG00000123066	MED13L	MRFACD|PROSIT240|THRAP2|TRAP240L	mediator complex subunit 13L	protein-coding
28.9667-7	chr4	120516716	120517243	+	0.1	NA	Intergenic	L2a|LINE|L2	405887	NM_001300824	11107	Hs.666782	NM_018699	ENSG00000138738	PRDM5	BCS2|PFM2	PR/SET domain 5	protein-coding
27.6667-11	chr2	138234552	138235089	+	0.1	NA	Intergenic	L2a|LINE|L2	132936	NR_135526	105373635		NR_135526	ENSG00000224231	LINC01832	-	long intergenic non-protein coding RNA 1832	ncRNA
25.5667-13	chr4	85291436	85291904	+	0.1	NA	Intergenic	L1MB3|LINE|L1	-183480	NM_001025616	83478	Hs.444229	NM_031305	ENSG00000138639	ARHGAP24	FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP	Rho GTPase activating protein 24	protein-coding
18.5333-20	chr7	25274801	25275128	+	0.1	NA	Intergenic	Intergenic	-46478	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding
28.5333-7	chr22	46018535	46018894	+	0.1	NA	Intergenic	L2c|LINE|L2	12098	NR_027240	730668	Hs.640071	NR_027240	ENSG00000280424	LOC730668	-	dynein heavy chain -like pseudogene	pseudo
17.1667-7	chr17	63965057	63965228	+	0.1	NA	intron (NM_000334, intron 8 of 23)	AluSz|SINE|Alu	7776	NM_000334	6329	Hs.46038	NM_000334	ENSG00000007314	SCN4A	CMS16|HOKPP2|HYKPP|HYPP|NAC1A|Na(V)1.4|Nav1.4|SkM1	sodium voltage-gated channel alpha subunit 4	protein-coding
19.7333-5	chr3	21270277	21270695	+	0.1	NA	Intergenic	Intergenic	-135240	NR_002311	391518	Hs.543226	NR_002311		VENTXP7	HPX42|VENTX1	VENT homeobox pseudogene 7	pseudo
19.6333-9	chr22	40488396	40488712	+	0.1	NA	intron (NM_020831, intron 3 of 14)	AluSq|SINE|Alu	-25114	NM_001282660	57591	Hs.654688	NM_020831	ENSG00000196588	MRTFA	BSAC|MAL|MKL|MKL1|MRTF-A	myocardin related transcription factor A	protein-coding
19.9667-2	chr10	91389570	91390032	+	0.1	NA	intron (NR_024467, intron 3 of 4)	intron (NR_024467, intron 3 of 4)	-19434	NM_001348365	143279	Hs.596096	NM_173497	ENSG00000165338	HECTD2	-	HECT domain E3 ubiquitin protein ligase 2	protein-coding
13.9667-2	chr15	53174632	53174877	+	0.1	NA	Intergenic	Intergenic	58389	NR_147181	105370822	Hs.527821	NR_147181	ENSG00000259237	LINC02490	-	long intergenic non-protein coding RNA 2490	ncRNA
16.4333-2	chr19	29864018	29864213	+	0.1	NA	Intergenic	Intergenic	52124	NM_001322261	898	Hs.244723	NM_001238	ENSG00000105173	CCNE1	CCNE|pCCNE1	cyclin E1	protein-coding
24.3667-6	chr2	29564203	29564617	+	0.1	NA	intron (NM_004304, intron 3 of 28)	intron (NM_004304, intron 3 of 28)	-89033	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA
36.0333-2	chr18	69785226	69785877	+	0.1	NA	intron (NM_152721, intron 7 of 7)	intron (NM_152721, intron 7 of 7)	162322	NM_001303618	10666	Hs.660130	NM_006566	ENSG00000150637	CD226	DNAM-1|DNAM1|PTA1|TLiSA1	CD226 molecule	protein-coding
14.8333-4	chr15	88467521	88467729	+	0.1	NA	promoter-TSS (NM_001321976)	promoter-TSS (NM_001321976)	-83	NM_001321973	64963	Hs.111286	NM_022839	ENSG00000181991	MRPS11	HCC-2|MRP-S11|S11mt	mitochondrial ribosomal protein S11	protein-coding
17.6-2	chr12	109696182	109696523	+	0.1	NA	Intergenic	Intergenic	-17473	NM_032829	84915	Hs.661785	NM_032829	ENSG00000139438	FAM222A	C12orf34	family with sequence similarity 222 member A	protein-coding
32.1667-6	chr2	211402920	211403368	+	0.1	NA	intron (NM_005235, intron 25 of 27)	Arthur1C|DNA|hAT-Tip100	785573	NR_002763	29034	Hs.658398	NR_002763	ENSG00000280837	CPS1-IT1	CPS1-IT|CPS1IT|CPS1IT1|PRO0132	CPS1 intronic transcript 1	ncRNA
13.1	chr1	179269220	179269395	+	0.1	NA	Intergenic	MLT1G|LTR|ERVL-MaLR	-24407	NM_001252512	6646	Hs.445588	NM_003101	ENSG00000057252	SOAT1	ACACT|ACAT|ACAT-1|ACAT1|SOAT|STAT	sterol O-acyltransferase 1	protein-coding
18.3-9	chr6	64471611	64471949	+	0.1	NA	intron (NM_001292009, intron 26 of 43)	L1M2|LINE|L1	664944	NR_157848	112935969		NR_157848		SCAT8	EYS-AS1	S-phase cancer associated transcript 8	ncRNA
18.7-5	chr19	30722191	30722599	+	0.1	NA	Intergenic	Intergenic	350011	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding
43.2667-3	chr12	65977718	65978285	+	0.1	NA	Intergenic	Intergenic	45725	NR_106722	102464827		NR_106722	ENSG00000276878	MIR6074	hsa-mir-6074	microRNA 6074	ncRNA
20.8333-13	chr4	47567761	47568235	+	0.1	NA	intron (NM_020453, intron 15 of 22)	intron (NM_020453, intron 15 of 22)	82723	NM_020453	57205	Hs.437241	NM_020453	ENSG00000145246	ATP10D	ATPVD	ATPase phospholipid transporting 10D (putative)	protein-coding
41.1333	chr1	86995231	86995726	+	0.1	NA	intron (NM_012262, intron 1 of 6)	intron (NM_012262, intron 1 of 6)	80843	NM_001134492	9653	Hs.743280	NM_012262	ENSG00000153936	HS2ST1	dJ604K5.2	heparan sulfate 2-O-sulfotransferase 1	protein-coding
11.4333-6	chr8	115686753	115686929	+	0.1	NA	Intergenic	Intergenic	-17866	NM_014112	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
23.8333-4	chr22	22745449	22745823	+	0.1	NA	Intergenic	Intergenic	-77140	NR_030755	723778		NR_030755	ENSG00000284049	MIR650	MIRN650|hsa-mir-650	microRNA 650	ncRNA
32.6333-5	chr6	99239569	99240313	+	0.1	NA	Intergenic	MamRTE1|LINE|RTE-BovB	109733	NM_032511	84553	Hs.573245	NM_032511	ENSG00000146267	FAXC	C6orf168|dJ273F20	failed axon connections homolog, metaxin like GST domain containing	protein-coding
27.2-3	chr12	56101965	56102500	+	0.1	NA	3' UTR (NM_001982, exon 28 of 28)	3' UTR (NM_001982, exon 28 of 28)	-2327	NM_006191	5036	Hs.524498	NM_006191	ENSG00000170515	PA2G4	EBP1|HG4-1|p38-2G4	proliferation-associated 2G4	protein-coding
18.3667-16	chr9	86834882	86835238	+	0.1	NA	Intergenic	Intergenic	112446	NM_002048	2619	Hs.65029	NM_002048	ENSG00000180447	GAS1	-	growth arrest specific 1	protein-coding
22-5	chr17	76777650	76778103	+	0.1	NA	intron (NM_001353019, intron 13 of 13)	FLAM_C|SINE|Alu	-21168	NR_110837	101928514	Hs.617206	NR_110837	ENSG00000267065	LINC02080	-	long intergenic non-protein coding RNA 2080	ncRNA
26.2333-11	chr4	16130982	16131558	+	0.1	NA	Intergenic	AluSz|SINE|Alu	-47247	NM_001145848	8842	Hs.614734	NM_006017	ENSG00000007062	PROM1	AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4	prominin 1	protein-coding
11.7333	chr15	96029809	96029963	+	0.1	NA	Intergenic	Intergenic	97955	NR_158193	105369212		NR_158193		LOC105369212	-	uncharacterized LOC105369212	ncRNA
19.7667-7	chr3	10388654	10389048	+	0.1	NA	intron (NM_001001331, intron 5 of 22)	Charlie4a|DNA|hAT-Charlie	5711	NR_030614	100126334		NR_030614	ENSG00000216135	MIR885	MIRN885|hsa-mir-885|mir-885	microRNA 885	ncRNA
32.5333-3	chr17	50691605	50691976	+	0.1	NA	3' UTR (NM_003786, exon 31 of 31)	3' UTR (NM_003786, exon 31 of 31)	16124	NM_052855	91369	Hs.463426	NM_052855	ENSG00000154945	ANKRD40	-	ankyrin repeat domain 40	protein-coding
20.9-4	chr11	116561566	116561988	+	0.1	NA	Intergenic	Intergenic	-77645	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LINC02702	-	long intergenic non-protein coding RNA 2702	ncRNA
29.2667-12	chrX	62872452	62873035	+	0.1	NA	Intergenic	LTR16B2|LTR|ERVL	478589	NM_001012968	139886	Hs.612782	NM_001012968	ENSG00000186767	SPIN4	TDRD28	spindlin family member 4	protein-coding
21.8-16	chr8	36207974	36208513	+	0.1	NA	Intergenic	Intergenic	-497923	NR_125819	101929550	Hs.583803	NR_125819		LOC101929550	-	uncharacterized LOC101929550	ncRNA
28.3667-4	chr9	79720393	79720752	+	0.1	NA	intron (NM_001351563, intron 14 of 17)	intron (NM_001351563, intron 14 of 17)	-103958	NR_121213	101927477	Hs.571630	NR_121212		LINC01507	XLOC_000303	long intergenic non-protein coding RNA 1507	ncRNA
10.6-5	chr9	108935756	108935863	+	0.1	NA	intron (NM_017832, intron 2 of 5)	intron (NM_017832, intron 2 of 5)	1409	NM_017832	54942	Hs.29276	NM_017832	ENSG00000119328	ABITRAM	C9orf6|CG-8|FAM206A|Simiate	actin binding transcription modulator	protein-coding
33.5333-5	chr8	134330357	134330692	+	0.1	NA	Intergenic	MIR|SINE|MIR	-267547	NR_002438	594840	Hs.626298	NR_002438	ENSG00000248492	ZFAT-AS1	NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS	ZFAT antisense RNA 1	ncRNA
20.6-2	chr1	235283304	235283698	+	0.1	NA	intron (NR_135074, intron 2 of 24)	L1ME4a|LINE|L1	43986	NM_001206794	51742	Hs.575782	NM_016374	ENSG00000054267	ARID4B	BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180	AT-rich interaction domain 4B	protein-coding
21.3-17	chr5	134174143	134174469	+	0.1	NA	intron (NM_006930, intron 1 of 4)	intron (NM_006930, intron 1 of 4)	2644	NM_170679	6500	Hs.171626	NM_006930	ENSG00000113558	SKP1	EMC19|OCP-II|OCP2|SKP1A|TCEB1L|p19A	S-phase kinase associated protein 1	protein-coding
22.4333-12	chr20	11207013	11207441	+	0.1	NA	Intergenic	Intergenic	66156	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA
34.6667-10	chr2	6172146	6172738	+	0.1	NA	Intergenic	L1M5|LINE|L1	190464	NR_026833	400940	Hs.378814	NM_207479		LOC400940	-	uncharacterized LOC400940	ncRNA
13.8667-6	chr2	217692291	217692637	+	0.1	NA	intron (NR_026597, intron 1 of 12)	intron (NR_026597, intron 1 of 12)	64129	NR_026597	729582	Hs.572788	NR_026597		DIRC3	-	disrupted in renal carcinoma 3	ncRNA
14.4667-2	chr18	7248463	7248672	+	0.1	NA	Intergenic	Intergenic	17463	NM_001105581	339291	Hs.647588	NM_001105581	ENSG00000206422	LRRC30	-	leucine rich repeat containing 30	protein-coding
13.6333-12	chr6	43226735	43226903	+	0.1	NA	intron (NM_199184, intron 1 of 2)	MER5A|DNA|hAT-Charlie	2662	NM_199184	10591	Hs.109752	NM_006443	ENSG00000112667	DNPH1	C6orf108|RCL|dJ330M21.3	2'-deoxynucleoside 5'-phosphate N-hydrolase 1	protein-coding
44.1	chr2	57803842	57804705	+	0.1	NA	Intergenic	Intergenic	-103378	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
27.1667-9	chr8	87613812	87614410	+	0.1	NA	Intergenic	Intergenic	259904	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
16.8333-10	chr4	54993247	54993421	+	0.1	NA	Intergenic	LTR12C|LTR|ERV1	132261	NM_002253	3791	Hs.479756	NM_002253	ENSG00000128052	KDR	CD309|FLK1|VEGFR|VEGFR2	kinase insert domain receptor	protein-coding
33.4667-6	chr3	125028672	125029103	+	0.1	NA	intron (NM_020733, intron 2 of 16)	intron (NM_020733, intron 2 of 16)	27110	NM_020733	57493	Hs.477420	NM_020733	ENSG00000173706	HEG1	HEG|MST112|MSTP112	heart development protein with EGF like domains 1	protein-coding
15.2667-6	chr18	243113	243356	+	0.1	NA	intron (NM_005131, intron 11 of 20)	intron (NM_005131, intron 11 of 20)	24813	NM_005131	9984	Hs.712543	NM_005131	ENSG00000079134	THOC1	HPR1|P84|P84N5	THO complex 1	protein-coding
25.1333	chr1	9911145	9911488	+	0.1	NA	Intergenic	Intergenic	-1047	NM_020248	56998	Hs.463759	NM_020248	ENSG00000178585	CTNNBIP1	ICAT	catenin beta interacting protein 1	protein-coding
15.0667-15	chr7	91613248	91613523	+	0.1	NA	Intergenic	L1MC|LINE|L1	267317	NM_006980	7978	Hs.532216	NM_006980	ENSG00000127989	MTERF1	MTERF	mitochondrial transcription termination factor 1	protein-coding
15.9-5	chr12	40206766	40206925	+	0.1	NA	Intergenic	Intergenic	-18152	NM_198578	120892	Hs.187636	NM_198578	ENSG00000188906	LRRK2	AURA17|DARDARIN|PARK8|RIPK7|ROCO2	leucine rich repeat kinase 2	protein-coding
11.4-8	chr5	177260757	177260966	+	0.1	NA	intron (NM_172349, intron 15 of 23)	HAL1b|LINE|L1	42858	NM_001031677	53917	Hs.16258	NM_130781	ENSG00000169228	RAB24	-	RAB24, member RAS oncogene family	protein-coding
46.8-6	chr5	40176006	40176649	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	124036	NR_104633	102467077	Hs.148993	NR_104633		LINC00603	-	long intergenic non-protein coding RNA 603	ncRNA
27.6667-9	chr2	50609312	50609863	+	0.1	NA	intron (NM_001330093, intron 8 of 22)	MIRb|SINE|MIR	86675	NR_130470	103504737		NR_130470	ENSG00000216191	MIR8485	hsa-mir-8485	microRNA 8485	ncRNA
25.8667-6	chr2	77871990	77872521	+	0.1	NA	intron (NR_110288, intron 2 of 3)	intron (NR_110288, intron 2 of 3)	-43679	NR_110286	101927926	Hs.149042	NR_110286	ENSG00000233605	LINC01851	-	long intergenic non-protein coding RNA 1851	ncRNA
18.3667	chr1	247177250	247177505	+	0.1	NA	Intergenic	Intergenic	-5360	NM_001297567	7678	Hs.421238	NM_003431	ENSG00000196418	ZNF124	HZF-16|HZF16|ZK7	zinc finger protein 124	protein-coding
21.9333-19	chr9	97518449	97518848	+	0.1	NA	intron (NM_003275, intron 1 of 9)	MLT1M|LTR|ERVL-MaLR	16982	NM_003275	7111	Hs.404289	NM_003275	ENSG00000136842	TMOD1	D9S57E|ETMOD|TMOD	tropomodulin 1	protein-coding
37.2-10	chr8	86863003	86863606	+	0.1	NA	Intergenic	Intergenic	-3111	NM_173538	168975	Hs.246284	NM_173538	ENSG00000176571	CNBD1	-	cyclic nucleotide binding domain containing 1	protein-coding
28.5-2	chr13	85903140	85903815	+	0.1	NA	Intergenic	Intergenic	-104058	NM_032229	84189	Hs.525105	NM_032229	ENSG00000184564	SLITRK6	DFNMYP	SLIT and NTRK like family member 6	protein-coding
17.6333-8	chr9	27072100	27072441	+	0.1	NA	Intergenic	AluSz|SINE|Alu	-36871	NM_001290077	7010	Hs.89640	NM_000459	ENSG00000120156	TEK	CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1	TEK receptor tyrosine kinase	protein-coding
10-2	chr5	131152237	131152378	+	0.1	NA	Intergenic	Intergenic	12949	NM_005340	3094	Hs.483305	NM_005340	ENSG00000169567	HINT1	HINT|NMAN|PKCI-1|PRKCNH1	histidine triad nucleotide binding protein 1	protein-coding
18.2333-3	chr12	884251	884560	+	0.1	NA	intron (NM_001184985, intron 18 of 27)	intron (NM_001184985, intron 18 of 27)	48671	NM_001297420	5893	Hs.410355	NM_134422	ENSG00000002016	RAD52	-	RAD52 homolog, DNA repair protein	protein-coding
23.3-11	chr4	55617108	55617466	+	0.1	NA	intron (NR_120489, intron 2 of 8)	intron (NR_120489, intron 2 of 8)	19011	NM_006681	10874	Hs.418367	NM_006681	ENSG00000109255	NMU	-	neuromedin U	protein-coding
32.5333-6	chr3	87506400	87507004	+	0.1	NA	Intergenic	Intergenic	-230118	NM_001122757	5449	Hs.591654	NM_000306	ENSG00000064835	POU1F1	CPHD1|GHF-1|PIT1|POU1F1a|Pit-1	POU class 1 homeobox 1	protein-coding
23.3667-17	chr8	89706790	89707087	+	0.1	NA	Intergenic	L1ME1|LINE|L1	50773	NR_125822	101929709	Hs.651324	NR_125822	ENSG00000251136	LOC101929709	-	uncharacterized LOC101929709	ncRNA
21.5667-7	chr21	30793639	30794012	+	0.1	NA	Intergenic	Intergenic	19449	NM_175857	337879	Hs.407655	NM_175857	ENSG00000183640	KRTAP8-1	KAP8.1	keratin associated protein 8-1	protein-coding
42.2-4	chr16	80531753	80532609	+	0.1	NA	intron (NR_120307, intron 1 of 5)	L1MEf|LINE|L1	-8553	NM_001305017	83657	Hs.98849	NM_130897	ENSG00000168589	DYNLRB2	DNCL2B|DNLC2B|ROBLD2	dynein light chain roadblock-type 2	protein-coding
15.4667-18	chr6	117803472	117803629	+	0.1	NA	Intergenic	L1PA5|LINE|L1	-103714	NM_001029858	222553	Hs.654841	NM_001029858	ENSG00000196376	SLC35F1	C6orf169|dJ230I3.1	solute carrier family 35 member F1	protein-coding
35.9-5	chr2	211268019	211268447	+	0.1	NA	Intergenic	L1PA6|LINE|L1	650662	NR_002763	29034	Hs.658398	NR_002763	ENSG00000280837	CPS1-IT1	CPS1-IT|CPS1IT|CPS1IT1|PRO0132	CPS1 intronic transcript 1	ncRNA
12.0667-5	chr17	703189	703393	+	0.1	NA	intron (NM_001366254, intron 2 of 19).2	intron (NM_001366254, intron 2 of 19).2	11548	NM_018289	55275	Hs.461819	NM_018289	ENSG00000141252	VPS53	HCCS1|PCH2E|hVps53L|pp13624	VPS53 subunit of GARP complex	protein-coding
27.4667-6	chr17	27178857	27179323	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	-89849	NR_135673	105371703	Hs.649918	NR_135673		LOC105371703	-	uncharacterized LOC105371703	ncRNA
16.2667-10	chr5	100577084	100577249	+	0.1	NA	intron (NM_198507, intron 2 of 2)	L1MA4|LINE|L1	41792	NM_198507	345757	Hs.356108	NM_198507	ENSG00000174132	FAM174A	HGS_RE408|NS5ATP6|TMEM157|UNQ1912	family with sequence similarity 174 member A	protein-coding
24.3-11	chr3	122877777	122878170	+	0.1	NA	intron (NM_032839, intron 8 of 8)	intron (NM_032839, intron 8 of 8)	-8540	NR_024618	100129550	Hs.61558	NR_024618	ENSG00000273033	LINC02035	-	long intergenic non-protein coding RNA 2035	ncRNA
28.2333-4	chr13	60378307	60378702	+	0.1	NA	Intergenic	Intergenic	-17953	NM_001146071	81550	Hs.525061	NM_030794	ENSG00000083544	TDRD3	-	tudor domain containing 3	protein-coding
40.0667-2	chr6	37142033	37142912	+	0.1	NA	Intergenic	Intergenic	-27680	NM_002648	5292	Hs.81170	NM_002648	ENSG00000137193	PIM1	PIM	Pim-1 proto-oncogene, serine/threonine kinase	protein-coding
25.0667-4	chr16	3440239	3440804	+	0.1	NA	intron (NM_152457, intron 3 of 3)	AluY|SINE|Alu	2983	NM_152457	146434	Hs.88630	NM_152457	ENSG00000167981	ZNF597	HIT-4	zinc finger protein 597	protein-coding
25.8333-12	chr9	10590662	10591114	+	0.1	NA	intron (NM_002839, intron 2 of 45)	intron (NM_002839, intron 2 of 45)	22114	NM_002839	5789	Hs.446083	NM_002839	ENSG00000153707	PTPRD	HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA	protein tyrosine phosphatase receptor type D	protein-coding
32.1-4	chr2	24231201	24231684	+	0.1	NA	intron (NM_001348182, intron 28 of 38)	intron (NM_001348182, intron 28 of 38)	56389	NM_001040710	653140	Hs.741736	NM_001040710	ENSG00000186453	FAM228A	C2orf84	family with sequence similarity 228 member A	protein-coding
14.2667-8	chr20	33740998	33741162	+	0.1	NA	intron (NM_001282935, intron 2 of 13)	intron (NM_001282935, intron 2 of 13)	9084	NM_001282933	84905	Hs.516989	NM_032819	ENSG00000131061	ZNF341	HIES3	zinc finger protein 341	protein-coding
13.0667-4	chr17	77462799	77462974	+	0.1	NA	intron (NM_001293698, intron 1 of 9)	AluSz|SINE|Alu	8859	NM_001293698	10801	Hs.440932	NM_006640	ENSG00000184640	SEPTIN9	AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1	septin 9	protein-coding
23.2333-5	chr21	28074268	28074562	+	0.1	NA	intron (NR_126010, intron 1 of 4)	intron (NR_126010, intron 1 of 4)	-15988	NR_126011	284825	Hs.651529	NR_126010	ENSG00000232079	LINC01697	-	long intergenic non-protein coding RNA 1697	ncRNA
30.5333-8	chr5	19104515	19105276	+	0.1	NA	Intergenic	Intergenic	781377	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
12.6333-8	chr5	11836884	11837086	+	0.1	NA	intron (NM_001288717, intron 1 of 20)	intron (NM_001288717, intron 1 of 20)	67461	NR_109988	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
21.5667-11	chr8	102483855	102484159	+	0.1	NA	Intergenic	Intergenic	-67582	NM_024410	4956	Hs.159274	NM_024410	ENSG00000155087	ODF1	CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF	outer dense fiber of sperm tails 1	protein-coding
26.2667-4	chr3	33186291	33186634	+	0.1	NA	intron (NM_015551, intron 3 of 4)	AluSc|SINE|Alu	32348	NM_015551	26032	Hs.196647	NM_015551	ENSG00000173705	SUSD5	-	sushi domain containing 5	protein-coding
21.3667-9	chr3	98015224	98015606	+	0.1	NA	intron (NM_001105580, intron 4 of 9)	AluSz|SINE|Alu	19889	NR_047685	200959	Hs.534578	NM_001105580	ENSG00000183185	GABRR3	-	gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene)	protein-coding
20.1667-18	chr8	123115243	123115554	+	0.1	NA	intron (NM_001363156, intron 9 of 19)	intron (NM_001363156, intron 9 of 19)	42149	NM_001363149	93594	Hs.492716	NM_145647	ENSG00000156787	TBC1D31	Gm85|WDR67	TBC1 domain family member 31	protein-coding
13.6-8	chrX	124065292	124065558	+	0.1	NA	intron (NM_006603, intron 19 of 32)	intron (NM_006603, intron 19 of 32)	103719	NM_001042751	10735	Hs.496710	NM_006603	ENSG00000101972	STAG2	NEDXCF|SA-2|SA2|SCC3B|bA517O1.1	stromal antigen 2	protein-coding
24.5667	chr1	235727654	235728152	+	0.1	NA	intron (NM_000081, intron 38 of 52)	intron (NM_000081, intron 38 of 52)	-77149	NM_001098721	2786	Hs.159711	NM_004485	ENSG00000168243	GNG4	-	G protein subunit gamma 4	protein-coding
26.2333-12	chr4	24263599	24264039	+	0.1	NA	intron (NM_001330752, intron 1 of 13)	AluJb|SINE|Alu	209086	NM_001354826	10891	Hs.527078	NM_013261	ENSG00000109819	PPARGC1A	LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1	PPARG coactivator 1 alpha	protein-coding
30.9-5	chr12	78112005	78112511	+	0.1	NA	intron (NM_001024383, intron 12 of 39)	intron (NM_001024383, intron 12 of 39)	247488	NR_135021	105369860	Hs.156898	NR_135021	ENSG00000258220	LINC02424	-	long intergenic non-protein coding RNA 2424	ncRNA
28.5333-6	chr2	50334804	50335174	+	0.1	NA	intron (NM_001330093, intron 17 of 22)	intron (NM_001330093, intron 17 of 22)	12765	NM_001330091	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
30.8-17	chr8	139602196	139602616	+	0.1	NA	intron (NR_104210, intron 3 of 3)	intron (NR_104210, intron 3 of 3)	100717	NM_001282534	51305	Hs.493037	NM_001282534	ENSG00000169427	KCNK9	K2p9.1|KT3.2|TASK-3|TASK3	potassium two pore domain channel subfamily K member 9	protein-coding
30-2	chr10	28879187	28879901	+	0.1	NA	intron (NM_001278522, intron 4 of 4)	intron (NM_001278522, intron 4 of 4)	33136	NM_001278522	283080		NM_001278522		C10orf126	bA492M23.1	chromosome 10 open reading frame 126	protein-coding
23.4333-6	chr14	62682201	62682621	+	0.1	NA	Intergenic	MER73|LTR|ERVL	363047	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
24.7667-11	chr9	123499787	123500133	+	0.1	NA	intron (NM_001352968, intron 12 of 18)	intron (NM_001352968, intron 12 of 18)	-14338	NR_106972	102465688		NR_106972	ENSG00000274932	MIR7150	hsa-mir-7150	microRNA 7150	ncRNA
16.7-13	chr3	161627787	161628129	+	0.1	NA	Intergenic	MER92-int|LTR|ERV1	131150	NM_001080440	131149	Hs.585021	NM_001080440	ENSG00000182447	OTOL1	C1QTNF15|C1QTNF16	otolin 1	protein-coding
11.1333	chr4	108471176	108471310	+	0.1	NA	Intergenic	L1MC1|LINE|L1	-85990	NR_134679	101929621	Hs.679455	NR_134679		LOC101929621	-	uncharacterized LOC101929621	ncRNA
35.8667-6	chr7	118386171	118386672	+	0.1	NA	Intergenic	Intergenic	161717	NM_019644	56311	Hs.729340	NM_019644	ENSG00000106013	ANKRD7	TSA806	ankyrin repeat domain 7	protein-coding
24.5667-15	chr7	38032179	38032641	+	0.1	NA	Intergenic	Intergenic	111091	NM_001242948	54749	Hs.563491	NM_017549	ENSG00000086289	EPDR1	EPDR|MERP-1|MERP1|UCC1	ependymin related 1	protein-coding
10.6333-5	chr3	196112629	196112765	+	0.1	NA	Intergenic	Intergenic	-29939	NR_034088	401109	Hs.280133	NM_001001699	ENSG00000224652	LINC00885	-	long intergenic non-protein coding RNA 885	ncRNA
21.2667-4	chr3	127777362	127777608	+	0.1	NA	intron (NM_001003794, intron 3 of 7)	MLT1J|LTR|ERVL-MaLR	45397	NM_007283	11343	Hs.277035	NM_007283	ENSG00000074416	MGLL	HU-K5|HUK5|MAGL|MGL	monoglyceride lipase	protein-coding
17.1-20	chr7	79901893	79902292	+	0.1	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	-232739	NM_002069	2770	Hs.134587	NM_002069	ENSG00000127955	GNAI1	Gi	G protein subunit alpha i1	protein-coding
16.5-6	chr20	3166986	3167248	+	0.1	NA	exon (NM_001282533, exon 3 of 6)	exon (NM_001282533, exon 3 of 6)	6432	NM_001282533	9762	Hs.90232	NM_014731	ENSG00000088899	LZTS3	PROSAPIP1	leucine zipper tumor suppressor family member 3	protein-coding
34.3333-11	chr6	119620920	119621462	+	0.1	NA	intron (NR_134600, intron 2 of 3)	intron (NR_134600, intron 2 of 3)	71383	NR_134600	105377975	Hs.671597	NR_134600		LOC105377975	-	uncharacterized LOC105377975	ncRNA
27.7-9	chr2	228975348	228975860	+	0.1	NA	Intergenic	L1PA16|LINE|L1	256488	NM_001330156	55022	Hs.745038	NM_017933	ENSG00000153823	PID1	HMFN2073|NYGGF4|P-CLI1|PCLI1	phosphotyrosine interaction domain containing 1	protein-coding
27.9	chr17	31824391	31824959	+	0.1	NA	Intergenic	Intergenic	34287	NM_001330176	55352	Hs.462729	NM_018405	ENSG00000172301	COPRS	C17orf79|COPR5|HSA272196|TTP1	coordinator of PRMT5 and differentiation stimulator	protein-coding
16.1667-14	chr6	133168091	133168252	+	0.1	NA	Intergenic	Intergenic	-73186	NM_001370458	2070	Hs.596680	NM_004100	ENSG00000112319	EYA4	CMD1J|DFNA10	EYA transcriptional coactivator and phosphatase 4	protein-coding
17.5667-10	chr6	98156239	98156475	+	0.1	NA	Intergenic	L1PA8|LINE|L1	131826	NR_031579	100302164		NR_031579	ENSG00000238367	MIR2113	hsa-mir-2113	microRNA 2113	ncRNA
10.4333-3	chr7	14529172	14529296	+	0.1	NA	intron (NM_001350717, intron 19 of 24)	intron (NM_001350717, intron 19 of 24)	312216	NM_145695	1607	Hs.567255	NM_004080	ENSG00000136267	DGKB	DAGK2|DGK|DGK-BETA	diacylglycerol kinase beta	protein-coding
14.3667-9	chr9	89088557	89088780	+	0.1	NA	intron (NM_016848, intron 2 of 11)	intron (NM_016848, intron 2 of 11)	90150	NM_016848	53358	Hs.292737	NM_016848	ENSG00000148082	SHC3	N-Shc|NSHC|RAI|SHCC	SHC adaptor protein 3	protein-coding
25.2667-14	chr7	109478370	109478887	+	0.1	NA	Intergenic	Intergenic	481585	NR_003024	442720	Hs.530096	NR_003024	ENSG00000237064	EIF3IP1	RG208K23	eukaryotic translation initiation factor 3 subunit I pseudogene 1	pseudo
23.8667	chr10	102907404	102907703	+	0.1	NA	intron (NR_160733, intron 1 of 2)	intron (NR_160733, intron 1 of 2)	-10741	NM_199076	54805	Hs.643509	NM_017649	ENSG00000148842	CNNM2	ACDP2|HOMG6|HOMGSMR	cyclin and CBS domain divalent metal cation transport mediator 2	protein-coding
20.8333-6	chr12	102251698	102251985	+	0.1	NA	Intergenic	L1MEf|LINE|L1	-54008	NM_002674	5367	Hs.707990	NM_002674	ENSG00000183395	PMCH	MCH|ppMCH	pro-melanin concentrating hormone	protein-coding
21.1-5	chr3	3476002	3476271	+	0.1	NA	Intergenic	Intergenic	-296419	NM_016302	51185	Hs.18925	NM_016302	ENSG00000113851	CRBN	MRT2|MRT2A	cereblon	protein-coding
22.5333-8	chr14	47169930	47170253	+	0.1	NA	intron (NM_001113498, intron 3 of 16)	intron (NM_001113498, intron 3 of 16)	173155	NM_182830	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
15.4667-12	chr22	45283991	45284145	+	0.1	NA	promoter-TSS (NM_006953)	promoter-TSS (NM_006953)	-881	NM_001167574	7380	Hs.632787	NM_006953	ENSG00000100373	UPK3A	UP3A|UPIII|UPIIIA|UPK3	uroplakin 3A	protein-coding
24.2-6	chr4	58411876	58412288	+	0.1	NA	Intergenic	Intergenic	124246	NR_133943	105377671	Hs.225045	NR_133943	ENSG00000250340	LINC02494	-	long intergenic non-protein coding RNA 2494	ncRNA
24.4-25	chr8	142123016	142123316	+	0.1	NA	Intergenic	Intergenic	-53173	NR_039682	100616268		NR_039682	ENSG00000265247	MIR4472-1	-	microRNA 4472-1	ncRNA
28.0333-9	chr8	117005504	117006048	+	0.1	NA	intron (NM_001172811, intron 2 of 9)	Tigger18a|DNA|TcMar-Tigger	54801	NM_001172813	169026	Hs.532270	NM_173851	ENSG00000164756	SLC30A8	ZNT8|ZnT-8	solute carrier family 30 member 8	protein-coding
37.2333	chr12	1467210	1467789	+	0.1	NA	intron (NR_027948, intron 19 of 19)	intron (NR_027948, intron 19 of 19)	-32992	NR_028415	100292680	Hs.391695	NR_028415	ENSG00000249628	LINC00942	-	long intergenic non-protein coding RNA 942	ncRNA
42.4667-2	chr5	32429222	32429727	+	0.1	NA	intron (NM_016107, intron 2 of 19)	L1ME3A|LINE|L1	15266	NM_016107	51663	Hs.435231	NM_016107	ENSG00000056097	ZFR	SPG71|ZFR1	zinc finger RNA binding protein	protein-coding
27.2667-4	chr13	96648144	96648446	+	0.1	NA	intron (NM_153456, intron 1 of 1)	intron (NM_153456, intron 1 of 1)	221066	NR_039723	100616137		NR_039723	ENSG00000283487	MIR4501	-	microRNA 4501	ncRNA
17.1-19	chr6	150446549	150446861	+	0.1	NA	Intergenic	L2|LINE|L2	77693	NR_134655	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding
26.4333-16	chr5	98229230	98229575	+	0.1	NA	Intergenic	L1PA10|LINE|L1	-68163	NR_146477	105379098	Hs.566306	NR_146477		LINC01846	-	long intergenic non-protein coding RNA 1846	ncRNA
39.0667	chr13	111149102	111149765	+	0.1	NA	promoter-TSS (NR_046516)	promoter-TSS (NR_046516)	-868	NR_046516	100874226	Hs.577834	NR_046516		ARHGEF7-AS1	-	ARHGEF7 antisense RNA 1	ncRNA
9.66667-2	chr6	43609385	43609516	+	0.1	NA	intron (NM_006502, intron 9 of 10)	intron (NM_006502, intron 9 of 10)	17903	NM_001286216	54676	Hs.485449	NM_019096	ENSG00000172432	GTPBP2	JABELS	GTP binding protein 2	protein-coding
27.0667-9	chr4	138749333	138749752	+	0.1	NA	Intergenic	MLT1F2|LTR|ERVL-MaLR	263104	NR_133945	105377448	Hs.200280	NR_133945	ENSG00000250195	LOC105377448	-	uncharacterized LOC105377448	ncRNA
20.9667-9	chr3	22376827	22377289	+	0.1	NA	Intergenic	Intergenic	419919	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
9.03333-3	chr18	13008137	13008343	+	0.1	NA	intron (NM_032142, intron 3 of 44)	intron (NM_032142, intron 3 of 44)	16878	NM_032142	55125	Hs.100914	NM_018069	ENSG00000101639	CEP192	PPP1R62	centrosomal protein 192	protein-coding
24.6667	chr1	37786583	37786956	+	0.1	NA	Intergenic	HAL1|LINE|L1	-7333	NM_001113482	149175	Hs.534562	NM_152496	ENSG00000185090	MANEAL	-	mannosidase endo-alpha like	protein-coding
25.3-10	chr3	112229853	112230346	+	0.1	NA	intron (NM_001320531, intron 12 of 27).2	intron (NM_001320531, intron 12 of 27).2	64117	NR_135297	285335	Hs.680112	NM_183061	ENSG00000172139	SLC9C1	NHE|NHE-10|SLC9A10|sperm-NHE	solute carrier family 9 member C1	protein-coding
17.1667-3	chr10	69486820	69486991	+	0.1	NA	intron (NM_012339, intron 3 of 7)	intron (NM_012339, intron 3 of 7)	35438	NM_001351263	23555	Hs.499941	NM_012339	ENSG00000099282	TSPAN15	2700063A19Rik|NET-7|NET7|TM4SF15	tetraspanin 15	protein-coding
42.9-3	chr2	10053001	10053707	+	0.1	NA	3' UTR (NM_003597, exon 4 of 4)	3' UTR (NM_003597, exon 4 of 4)	9109	NM_001177718	8462	Hs.12229	NM_003597	ENSG00000172059	KLF11	FKLF|FKLF1|MODY7|TIEG2|Tieg3	Kruppel like factor 11	protein-coding
19.8333-10	chr3	80794661	80795111	+	0.1	NA	Intergenic	Intergenic	24182	NR_147145	105377175	Hs.180696	NR_147143	ENSG00000242781	LINC02050	-	long intergenic non-protein coding RNA 2050	ncRNA
22.3-7	chr21	32899528	32899842	+	0.1	NA	Intergenic	L1MC4|LINE|L1	-59203	NR_135522	102724502	Hs.130572	NR_135522	ENSG00000228961	LINC01690	-	long intergenic non-protein coding RNA 1690	ncRNA
15.0667-5	chr12	7701196	7701373	+	0.1	NA	Intergenic	Intergenic	-5509	NM_020634	9573	Hs.86232	NM_020634	ENSG00000184344	GDF3	KFS3|MCOP7|MCOPCB6	growth differentiation factor 3	protein-coding
26.8333-2	chr10	24663180	24663552	+	0.1	NA	intron (NM_001367450, intron 4 of 27)	L4_A_Mam|LINE|RTE-X	-40523	NM_001367455	57584	Hs.524195	NM_020824	ENSG00000107863	ARHGAP21	ARHGAP10	Rho GTPase activating protein 21	protein-coding
26.3-4	chr10	117821469	117821906	+	0.1	NA	Intergenic	L1MC|LINE|L1	-225134	NR_026940	255082	Hs.89387	NM_178816	ENSG00000177640	CASC2	C10orf5	cancer susceptibility 2	ncRNA
29.4667	chr1	53057230	53057737	+	0.1	NA	Intergenic	Intergenic	-4569	NM_001199081	127435	Hs.586141	NM_153703	ENSG00000174348	PODN	PCAN|SLRR5A	podocan	protein-coding
26.6-3	chr1	241613364	241613857	+	0.1	NA	intron (NM_014322, intron 1 of 3)	intron (NM_014322, intron 1 of 3)	22320	NM_001821	1122	Hs.654545	NM_001821	ENSG00000203668	CHML	REP2	CHM like Rab escort protein	protein-coding
33.2-13	chr8	15549763	15550250	+	0.1	NA	intron (NM_001356429, intron 1 of 10)	LTR2|LTR|ERV1	9743	NM_006765	7991	Hs.426324	NM_006765	ENSG00000104723	TUSC3	D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2	tumor suppressor candidate 3	protein-coding
16.1333-6	chr15	99114323	99114546	+	0.1	NA	intron (NM_145728, intron 2 of 3)	THE1D|LTR|ERVL-MaLR	9354	NM_015286	23336	Hs.207106	NM_015286	ENSG00000182253	SYNM	DMN|SYN	synemin	protein-coding
28.2667-3	chr14	68849385	68849714	+	0.1	NA	Intergenic	Intergenic	-53306	NM_001244701	677	Hs.85155	NM_004926	ENSG00000185650	ZFP36L1	BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1	ZFP36 ring finger protein like 1	protein-coding
41.2333	chr10	18977801	18978553	+	0.1	NA	Intergenic	Tigger17a|DNA|TcMar-Tigger	-70624	NM_001142308	340895	Hs.646734	NM_001142308	ENSG00000204740	MALRD1	C10orf112|DIET1|bA265G8.2	MAM and LDL receptor class A domain containing 1	protein-coding
33.8667-9	chr5	41442910	41443351	+	0.1	NA	intron (NM_001005473, intron 1 of 2)	(AT)n|Simple_repeat|Simple_repeat	67471	NM_001005473	345557	Hs.145404	NM_001005473	ENSG00000182836	PLCXD3	-	phosphatidylinositol specific phospholipase C X domain containing 3	protein-coding
16.4-7	chr21	28171892	28172074	+	0.1	NA	intron (NR_126012, intron 3 of 5)	intron (NR_126012, intron 3 of 5)	56684	NR_126012	101927973	Hs.570414	NR_126012	ENSG00000236532	LINC01695	-	long intergenic non-protein coding RNA 1695	ncRNA
19	chr10	106829692	106829935	+	0.1	NA	intron (NM_001206569, intron 2 of 25)	intron (NM_001206569, intron 2 of 25)	334893	NM_001206571	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
42.4333-3	chr18	79501611	79502471	+	0.1	NA	intron (NM_001278673, intron 8 of 8)	L1MB8|LINE|L1	-77241	NR_148949	284240	Hs.448912	NR_148949		LOC284240	-	uncharacterized LOC284240	ncRNA
26.2-19	chr6	417207	417767	+	0.1	NA	Intergenic	Intergenic	25735	NM_001195286	3662	Hs.401013	NM_002460	ENSG00000137265	IRF4	LSIRF|MUM1|NF-EM5|SHEP8	interferon regulatory factor 4	protein-coding
10.2667	chr11	17122435	17122570	+	0.1	NA	intron (NM_001321380, intron 13 of 31)	intron (NM_001321380, intron 13 of 31)	-44835	NM_001017	6207	Hs.446588	NM_001017	ENSG00000110700	RPS13	S13	ribosomal protein S13	protein-coding
24.7-7	chr2	118594888	118595193	+	0.1	NA	Intergenic	MIR|SINE|MIR	7926	NR_110272	101927709	Hs.274529	NR_110272		LOC101927709	-	uncharacterized LOC101927709	ncRNA
20.6667-13	chr3	104576737	104577015	+	0.1	NA	Intergenic	L1PA16|LINE|L1	-789837	NM_001243281	214	Hs.591293	NM_001627	ENSG00000170017	ALCAM	CD166|MEMD	activated leukocyte cell adhesion molecule	protein-coding
23.9667-10	chr6	111277677	111277921	+	0.1	NA	Intergenic	Intergenic	18460	NM_153369	91749	Hs.400572	NM_153369	ENSG00000173214	MFSD4B	KIAA1919|NaGLT1	major facilitator superfamily domain containing 4B	protein-coding
18.3-5	chr3	110018122	110018490	+	0.1	NA	Intergenic	Intergenic	415478	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
21.2333-7	chr18	70574921	70575358	+	0.1	NA	Intergenic	L1PA10|LINE|L1	75815	NR_160904	220158	Hs.448217	NM_178506		GTSCR1	-	Gilles de la Tourette syndrome chromosome region, candidate 1	ncRNA
29.6	chr1	154699657	154700017	+	0.1	NA	3' UTR (NM_001365837, exon 9 of 9)	3' UTR (NM_001365837, exon 9 of 9)	-71840	NM_001365045	103	Hs.12341	NM_001111	ENSG00000160710	ADAR	ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136	adenosine deaminase RNA specific	protein-coding
30.8-14	chr7	39607846	39608216	+	0.1	NA	intron (NM_001282446, intron 2 of 2)	intron (NM_001282446, intron 2 of 2)	-15541	NM_005402	5898	Hs.6906	NM_005402	ENSG00000006451	RALA	RAL	RAS like proto-oncogene A	protein-coding
31.8333-3	chr21	30448547	30448979	+	0.1	NA	Intergenic	Intergenic	8484	NM_181623	254950	Hs.553654	NM_181623	ENSG00000186970	KRTAP15-1	KAP15.1	keratin associated protein 15-1	protein-coding
22.5667-9	chr7	111685179	111685511	+	0.1	NA	Intergenic	Intergenic	-122828	NM_001350959	83943	Hs.655722	NM_032549	ENSG00000184903	IMMP2L	IMMP2L-IT1|IMP2|IMP2-LIKE	inner mitochondrial membrane peptidase subunit 2	protein-coding
41.6-6	chr2	12510428	12511129	+	0.1	NA	intron (NR_110196, intron 4 of 5)	MSTD|LTR|ERVL-MaLR	-206094	NM_021643	28951	Hs.467751	NM_021643	ENSG00000071575	TRIB2	C5FW|GS3955|TRB2	tribbles pseudokinase 2	protein-coding
14.8-2	chr10	33588402	33588586	+	0.1	NA	Intergenic	L1ME1|LINE|L1	184186	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA
28.6-22	chr5	63955541	63955957	+	0.1	NA	Intergenic	Intergenic	6543	NM_000524	3350	Hs.247940	NM_000524	ENSG00000178394	HTR1A	5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD	5-hydroxytryptamine receptor 1A	protein-coding
9.06667-3	chr16	46386357	46386466	+	0.1	NA	Intergenic	Intergenic	182686	NR_026556	124149	Hs.97414	NM_001004299		ANKRD26P1	-	ankyrin repeat domain 26 pseudogene 1	pseudo
35.9333-7	chr4	157312649	157313044	+	0.1	NA	exon (NM_000826, exon 4 of 16)	exon (NM_000826, exon 4 of 16)	92118	NM_000826	2891	Hs.32763	NM_000826	ENSG00000120251	GRIA2	GLUR2|GLURB|GluA2|GluR-K2|HBGR2	glutamate ionotropic receptor AMPA type subunit 2	protein-coding
24.1667-7	chr8	80613420	80613822	+	0.1	NA	Intergenic	7SLRNA|srpRNA|srpRNA	127395	NM_001105539	65986	Hs.591868	NM_023929	ENSG00000205189	ZBTB10	RINZF	zinc finger and BTB domain containing 10	protein-coding
9.26666	chr12	9196213	9196383	+	0.1	NA	intron (NM_002864, intron 10 of 35)	intron (NM_002864, intron 10 of 35)	12097	NM_002864	5858	Hs.707491	NM_002864	ENSG00000126838	PZP	CPAMD6	PZP alpha-2-macroglobulin like	protein-coding
17.0667	chr10	93675504	93675837	+	0.1	NA	intron (NM_145246, intron 12 of 13)	AluSg|SINE|Alu	26902	NM_001347712	118924	Hs.586650	NM_145246	ENSG00000148690	FRA10AC1	C10orf4|F26C11.1-like|FRA10A	FRA10A associated CGG repeat 1	protein-coding
17.5333-2	chr10	60278618	60278891	+	0.1	NA	intron (NM_001204403, intron 5 of 43)	intron (NM_001204403, intron 5 of 43)	111121	NM_001320874	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding
31.9333-10	chr9	98878636	98879056	+	0.1	NA	Intergenic	AluSg|SINE|Alu	-65061	NM_001855	1306	Hs.409034	NM_001855	ENSG00000204291	COL15A1	-	collagen type XV alpha 1 chain	protein-coding
10.9-9	chr7	148788469	148788651	+	0.1	NA	exon (NM_001370663, exon 14 of 22)	exon (NM_001370663, exon 14 of 22)	88850	NM_001370664	8454	Hs.146806	NM_003592	ENSG00000055130	CUL1	-	cullin 1	protein-coding
14.3667-7	chr2	180923212	180923465	+	0.1	NA	Intergenic	Intergenic	-57047	NM_001278555	10477	Hs.470804	NM_006357	ENSG00000170035	UBE2E3	UBCH9|UbcM2	ubiquitin conjugating enzyme E2 E3	protein-coding
16.1667-11	chr2	116530074	116530395	+	0.1	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	1186419	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
11.6667-2	chr10	49094966	49095082	+	0.1	NA	intron (NM_001031746, intron 2 of 7)	intron (NM_001031746, intron 2 of 7)	20498	NM_001031746	196740	Hs.522928	NM_144984	ENSG00000165633	VSTM4	C10orf72	V-set and transmembrane domain containing 4	protein-coding
18.7667-13	chr7	4806505	4806758	+	0.1	NA	intron (NM_018059, intron 9 of 14)	HAL1|LINE|L1	-17992	NR_039800	100616465		NR_039800	ENSG00000264474	MIR4656	-	microRNA 4656	ncRNA
30.6667-7	chr21	22338166	22338494	+	0.1	NA	Intergenic	Intergenic	239713	NR_038400	54143	Hs.352631	NR_038400	ENSG00000184856	LINC00308	C21orf74|NCRNA00308|PRED16	long intergenic non-protein coding RNA 308	ncRNA
12.9-9	chr7	145055347	145055575	+	0.1	NA	Intergenic	LTR16E2|LTR|ERVL	-219408	NM_001350894	27010	Hs.660232	NM_022445	ENSG00000196511	TPK1	HTPK1|PP20|THMD5	thiamin pyrophosphokinase 1	protein-coding
34.1333-6	chr22	43463072	43463413	+	0.1	NA	intron (NM_001362786, intron 3 of 6)	HAL1|LINE|L1	46690	NM_001362786	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding
10.9667-2	chr3	193985666	193985775	+	0.1	NA	intron (NR_033944, intron 1 of 2)	AluY|SINE|Alu	8518	NR_027764	100128023	Hs.730112	NR_027764		DPPA2P3	-	developmental pluripotency associated 2 pseudogene 3	pseudo
23.8333-8	chr5	96883373	96883879	+	0.1	NA	intron (NM_001329229, intron 2 of 17)	intron (NM_001329229, intron 2 of 17)	7687	NM_001329233	64167	Hs.482910	NM_022350	ENSG00000164308	ERAP2	L-RAP|LRAP	endoplasmic reticulum aminopeptidase 2	protein-coding
21.8-11	chr5	76774730	76775071	+	0.1	NA	Intergenic	Intergenic	-44130	NM_005242	2150	Hs.744181	NM_005242	ENSG00000164251	F2RL1	GPR11|PAR2	F2R like trypsin receptor 1	protein-coding
11.6-7	chr3	140535864	140536053	+	0.1	NA	intron (NM_022131, intron 9 of 16)	intron (NM_022131, intron 9 of 16)	-27169	NR_108084	101927808	Hs.581236	NR_108084	ENSG00000250433	CLSTN2-AS1	-	CLSTN2 antisense RNA 1	ncRNA
42.4-5	chr22	40204751	40205366	+	0.1	NA	intron (NM_015088, intron 1 of 20)	intron (NM_015088, intron 1 of 20)	27133	NM_015088	23112	Hs.372082	NM_015088	ENSG00000100354	TNRC6B	-	trinucleotide repeat containing adaptor 6B	protein-coding
29.3667-5	chr3	128082763	128083235	+	0.1	NA	intron (NM_003707, intron 9 of 10)	intron (NM_003707, intron 9 of 10)	7189	NR_046645	100874089	Hs.581603	NR_046645	ENSG00000239608	RUVBL1-AS1	-	RUVBL1 antisense RNA 1	ncRNA
20.6333-11	chr4	107473403	107473737	+	0.1	NA	Intergenic	L1ME3B|LINE|L1	246664	NM_005443	9061	Hs.368610	NM_005443	ENSG00000138801	PAPSS1	ATPSK1|PAPSS|SK1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	protein-coding
33.1333-7	chr3	22189736	22190156	+	0.1	NA	Intergenic	Intergenic	232807	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
21.8667-7	chr2	39034543	39035030	+	0.1	NA	intron (NM_005633, intron 8 of 22)	intron (NM_005633, intron 8 of 22)	-74442	NR_028386	375196	Hs.659035	NR_028386	ENSG00000269210	LOC375196	-	uncharacterized LOC375196	ncRNA
17.9667-9	chr5	45642595	45642899	+	0.1	NA	intron (NM_021072, intron 2 of 7)	intron (NM_021072, intron 2 of 7)	53633	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
15.6333-11	chr2	65305711	65306085	+	0.1	NA	Intergenic	L1MEj|LINE|L1	60880	NM_001128210	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding
27.2667-2	chr10	75098571	75099179	+	0.1	NA	intron (NM_001007272, intron 1 of 3)	MIRb|SINE|MIR	611	NM_001363514	51207	Hs.178170	NM_016364	ENSG00000079393	DUSP13	BEDP|DUSP13A|DUSP13B|MDSP|SKRP4|TMDP	dual specificity phosphatase 13	protein-coding
28.9667-2	chr12	117228525	117228936	+	0.1	NA	intron (NM_001204213, intron 21 of 27)	intron (NM_001204213, intron 21 of 27)	-38260	NM_015002	23014	Hs.740376	NM_015002	ENSG00000135108	FBXO21	FBX21	F-box protein 21	protein-coding
26.5667-2	chr10	90561060	90561649	+	0.1	NA	Intergenic	L1ME3D|LINE|L1	-20549	NR_110657	101926942	Hs.382666	NR_110657	ENSG00000236373	LINC02653	-	long intergenic non-protein coding RNA 2653	ncRNA
27.1667	chr1	23589383	23589724	+	0.1	NA	Intergenic	AluJb|SINE|Alu	-30052	NM_002167	3399	Hs.76884	NM_002167	ENSG00000117318	ID3	HEIR-1|bHLHb25	inhibitor of DNA binding 3, HLH protein	protein-coding
30.0667-2	chr1	208852700	208853159	+	0.1	NA	Intergenic	L3b|LINE|CR1	-119525	NR_146915	105372894	Hs.98665	NR_146915	ENSG00000236950	LINC01774	-	long intergenic non-protein coding RNA 1774	ncRNA
37.1333-8	chr5	39235242	39235658	+	0.1	NA	intron (NM_001243093, intron 1 of 18)	intron (NM_001243093, intron 1 of 18)	-15887	NM_001349333	2533	Hs.370503	NM_001465	ENSG00000082074	FYB1	ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3	FYN binding protein 1	protein-coding
28.4667-4	chr12	50454726	50455078	+	0.1	NA	3' UTR (NM_001352326, exon 9 of 9)	3' UTR (NM_001352326, exon 9 of 9)	-1669	NR_132753	106633800		NR_132753		SNORD133	ZL142|ZL42|ggn68	small nucleolar RNA, C/D box 133	snoRNA
15.7-3	chr12	123105517	123105795	+	0.1	NA	intron (NM_020845, intron 1 of 24)	intron (NM_020845, intron 1 of 24)	4772	NM_020845	57605	Hs.272759	NM_020845	ENSG00000090975	PITPNM2	NIR-3|NIR3|RDGB2|RDGBA2	phosphatidylinositol transfer protein membrane associated 2	protein-coding
33.5667-2	chr1	191188924	191189389	+	0.1	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	39342	NR_146892	105371660	Hs.127094	NR_146892	ENSG00000233882	LINC01680	-	long intergenic non-protein coding RNA 1680	ncRNA
44.9333-6	chrUn_KI270438v1	90757	91336	+	0.1	NA	NA	(GGAATGGAAT)n|Simple_repeat|Simple_repeat	NA	NA								
39.9667-5	chr5	45254863	45255510	+	0.1	NA	3' UTR (NM_021072, exon 8 of 8)	3' UTR (NM_021072, exon 8 of 8)	441194	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
26.4667-2	chr16	80662511	80663044	+	0.1	NA	intron (NM_152342, intron 2 of 6)	MER3|DNA|hAT-Charlie	-89969	NR_104666	101928276	Hs.149769	NR_104665	ENSG00000260737	LINC01227	-	long intergenic non-protein coding RNA 1227	ncRNA
37.3667-5	chr8	138779399	138779912	+	0.1	NA	intron (NM_152888, intron 13 of 64)	intron (NM_152888, intron 13 of 64)	134386	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
20.6333-14	chr8	120533062	120533296	+	0.1	NA	Intergenic	Intergenic	87760	NM_022045	27085	Hs.657656	NM_022045	ENSG00000172167	MTBP	MDM2BP	MDM2 binding protein	protein-coding
26.3333-8	chr5	167884315	167884690	+	0.1	NA	intron (NM_001368145, intron 2 of 26)	L1MB3|LINE|L1	129573	NM_001080428	57451	Hs.631957	NM_001080428	ENSG00000145934	TENM2	ODZ2|TEN-M2|TNM2|ten-2	teneurin transmembrane protein 2	protein-coding
15.7333-8	chr2	9913386	9913573	+	0.1	NA	intron (NM_001318977, intron 11 of 13)	L1MD3|LINE|L1	-38214	NM_198182	29841	Hs.418493	NM_198182	ENSG00000134317	GRHL1	LBP32|MGR|NH32|TFCP2L2	grainyhead like transcription factor 1	protein-coding
34.4333-8	chr2	5323312	5323746	+	0.1	NA	Intergenic	Intergenic	367589	NR_110580	102723818	Hs.128107	NR_110580		LINC01248	-	long intergenic non-protein coding RNA 1248	ncRNA
30.2333-6	chr17	40113222	40113669	+	0.1	NA	Intergenic	Intergenic	-8526	NM_001365920	339287	Hs.532786	NM_001012241	ENSG00000188895	MSL1	MSL-1	MSL complex subunit 1	protein-coding
20.1667	chr1	82661910	82662234	+	0.1	NA	Intergenic	MIR|SINE|MIR	-241111	NR_147074	103283057	Hs.551280	NR_147074	ENSG00000230817	LINC01362	-	long intergenic non-protein coding RNA 1362	ncRNA
17.2667-13	chr2	104951398	104951827	+	0.1	NA	intron (NR_110603, intron 1 of 2)	L1MB2|LINE|L1	-79017	NR_110374	102682016	Hs.638438	NR_110373	ENSG00000229743	LINC01159	linc-Brn1b	long intergenic non-protein coding RNA 1159	ncRNA
20.2333-9	chr7	10555370	10555572	+	0.1	NA	intron (NR_147499, intron 2 of 2)	L1M4c|LINE|L1	-147205	NR_149037	100131472	Hs.170681	NR_149037		LOC100131472	-	uncharacterized LOC100131472	ncRNA
27.3333	chr14	29837924	29838226	+	0.1	NA	intron (NM_001330069, intron 1 of 18)	intron (NM_001330069, intron 1 of 18)	89021	NM_001348390	5587	Hs.508999	NM_002742	ENSG00000184304	PRKD1	CHDED|PKC-MU|PKCM|PKD|PRKCM	protein kinase D1	protein-coding
12.6-5	chr10	51584603	51584754	+	0.1	NA	intron (NM_001098512, intron 3 of 17)	MIRb|SINE|MIR	114917	NM_015235	23283	Hs.591358	NM_015235	ENSG00000177613	CSTF2T	CstF-64T	cleavage stimulation factor subunit 2 tau variant	protein-coding
15.4-22	chr7	23418106	23418474	+	0.1	NA	intron (NM_006547, intron 3 of 14)	intron (NM_006547, intron 3 of 14)	21844	NR_145734	109616981		NR_145734	ENSG00000212264	SNORD65C	-	small nucleolar RNA, C/D box 65C	snoRNA
14.4667-5	chr4	14417114	14417301	+	0.1	NA	Intergenic	Intergenic	305239	NR_033931	152742	Hs.135435	NR_033931	ENSG00000248698	LINC01085	-	long intergenic non-protein coding RNA 1085	ncRNA
36.6667	chr10	35502223	35502617	+	0.1	NA	intron (NM_001282854, intron 3 of 7)	intron (NM_001282854, intron 3 of 7)	-102921	NM_153368	219770	Hs.638922	NM_153368	ENSG00000177291	GJD4	CX40.1	gap junction protein delta 4	protein-coding
25.6333-6	chr18	78262952	78263360	+	0.1	NA	Intergenic	L1MEf|LINE|L1	-269429	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA
26.1667-6	chr4	61309488	61309963	+	0.1	NA	intron (NM_001371342, intron 1 of 20)	intron (NM_001371342, intron 1 of 20)	107553	NM_001371342								
31.7333-3	chr16	58912782	58913395	+	0.1	NA	Intergenic	Intergenic	-178772	NM_001286220	2806	Hs.599470	NM_002080	ENSG00000125166	GOT2	KAT4|KATIV|KYAT4|mitAAT	glutamic-oxaloacetic transaminase 2	protein-coding
23-3	chr12	63865558	63865869	+	0.1	NA	intron (NM_001346201, intron 1 of 21)	HSMAR1|DNA|TcMar-Mariner	21013	NM_001346201	57522	Hs.210751	NM_020762	ENSG00000196935	SRGAP1	ARHGAP13|NMTC2	SLIT-ROBO Rho GTPase activating protein 1	protein-coding
13.2667-9	chr4	41285740	41285921	+	0.1	NA	Intergenic	MER20B|DNA|hAT-Charlie	28902	NM_004181	7345	Hs.518731	NM_004181	ENSG00000154277	UCHL1	HEL-117|HEL-S-53|NDGOA|PARK5|PGP 9.5|PGP9.5|PGP95|SPG79|Uch-L1	ubiquitin C-terminal hydrolase L1	protein-coding
21.6667	chr1	90424650	90425100	+	0.1	NA	Intergenic	L1MA2|LINE|L1	-232875	NR_145742	109616984		NR_145742	ENSG00000199666	SNORD3G	-	small nucleolar RNA, C/D box 3G	snoRNA
16-7	chr6	47082931	47083175	+	0.1	NA	Intergenic	Intergenic	-40721	NM_153840	266977	Hs.733762	NM_025048	ENSG00000153292	ADGRF1	GPR110|KPG_012|PGR19|hGPCR36	adhesion G protein-coupled receptor F1	protein-coding
23.4-6	chr3	179213155	179213497	+	0.1	NA	intron (NM_006218, intron 9 of 20)	Tigger1|DNA|TcMar-Tigger	38289	NM_014407	27094	Hs.591285	NM_014407	ENSG00000171121	KCNMB3	BKBETA3|HBETA3|K(VCA)BETA-3|KCNMB2|KCNMBL|SLO-BETA-3|SLOBETA3	potassium calcium-activated channel subfamily M regulatory beta subunit 3	protein-coding
63.8667	chr13	69649401	69650222	+	0.1	NA	Intergenic	L2|LINE|L2	427465	NR_125752	103689913	Hs.585628	NR_125752	ENSG00000235221	LINC00383	LINC00401	long intergenic non-protein coding RNA 383	ncRNA
20.6-5	chr2	173959964	173960338	+	0.1	NA	intron (NM_003111, intron 3 of 6)	AluJb|SINE|Alu	3729	NM_001017371	6670	Hs.531587	NM_003111	ENSG00000172845	SP3	SPR2	Sp3 transcription factor	protein-coding
10.8-6	chr5	129058924	129059041	+	0.1	NA	Intergenic	L1M1|LINE|L1	-35767	NM_016048	51015	Hs.483296	NM_016048	ENSG00000066583	ISOC1	CGI-111	isochorismatase domain containing 1	protein-coding
24.3667-11	chr5	76112011	76112491	+	0.1	NA	intron (NM_014979, intron 1 of 12)	L2a|LINE|L2	28868	NM_014979	22987	Hs.646953	NM_014979	ENSG00000122012	SV2C	-	synaptic vesicle glycoprotein 2C	protein-coding
19.8-16	chr3	181075769	181076094	+	0.1	NA	intron (NR_075091, intron 1 of 7)	MIR|SINE|MIR	19251	NR_075092	347689	Hs.654932	NR_004053		SOX2-OT	NCRNA00043|SOX2OT	SOX2 overlapping transcript	ncRNA
16.9667-4	chr13	114002331	114002623	+	0.1	NA	intron (NM_001320821, intron 20 of 25).2	intron (NM_001320821, intron 20 of 25).2	-28401	NM_001365455	100507747	Hs.704267	NM_001365455	ENSG00000283199	C13orf46	-	chromosome 13 open reading frame 46	protein-coding
21.9667-11	chr8	77821612	77821953	+	0.1	NA	Intergenic	ERVL-B4-int|LTR|ERVL	371085	NR_125830	102724874	Hs.571511	NR_125830		LOC102724874	-	uncharacterized LOC102724874	ncRNA
15.4667-17	chr6	98462078	98462255	+	0.1	NA	Intergenic	Intergenic	369534	NR_148381	105447646	Hs.211213	NR_148381		PNKY	-	long intergenic non-protein coding RNA PNKY	ncRNA
41.9666-3	chr22_KI270735v1_random	39679	40574	+	0.1	NA	NA	(ATTCC)n|Simple_repeat|Simple_repeat	NA	NA								
30.9667-4	chr4	131366483	131366896	+	0.1	NA	Intergenic	L1MEg|LINE|L1	-398149	NR_125883	101927305	Hs.507924	NR_125883		SNHG27	-	small nucleolar RNA host gene 27	ncRNA
31.2667-6	chr22	47023467	47023948	+	0.1	NA	intron (NM_001284305, intron 10 of 12)	L1MEc|LINE|L1	-107665	NR_122047	642757	Hs.632786	NR_122047	ENSG00000280080	TBC1D22A-AS1	-	TBC1D22A antisense RNA 1	ncRNA
12.8667-2	chr12	129759076	129759313	+	0.1	NA	intron (NM_133448, intron 1 of 8)	AluSq2|SINE|Alu	144831	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding
46.8-7	chr9	129921550	129922295	+	0.1	NA	intron (NM_001363755, intron 10 of 15)	intron (NM_001363755, intron 10 of 15)	52317	NR_106914	102466750		NR_106914	ENSG00000276124	MIR6855	hsa-mir-6855	microRNA 6855	ncRNA
40.5-3	chr12	94011616	94012079	+	0.1	NA	Intergenic	Intergenic	-68241	NR_135017	105369911	Hs.577495	NR_135017	ENSG00000257283	LOC105369911	-	uncharacterized LOC105369911	ncRNA
23.5667-8	chr4	31141804	31142232	+	0.1	NA	intron (NM_001173523, intron 2 of 2)	intron (NM_001173523, intron 2 of 2)	-29126	NR_125935	102723778	Hs.210739	NR_125935	ENSG00000251182	LINC02497	-	long intergenic non-protein coding RNA 2497	ncRNA
36.1667-8	chr5	98649414	98650221	+	0.1	NA	Intergenic	Intergenic	-118815	NM_001366510	285704	Hs.526902	NM_173670	ENSG00000174136	RGMB	DRAGON	repulsive guidance molecule BMP co-receptor b	protein-coding
32.5667-2	chr10	31204402	31204891	+	0.1	NA	intron (NR_134478, intron 1 of 2)	intron (NR_134478, intron 1 of 2)	16763	NR_134478	101929352	Hs.209289	NR_134478		LINC02664	-	long intergenic non-protein coding RNA 2664	ncRNA
20.4667-11	chr7	25816463	25816872	+	0.1	NA	Intergenic	Intergenic	-26548	NR_157808	646588	Hs.72068	NR_157808	ENSG00000223561	LOC646588	-	uncharacterized LOC646588	ncRNA
18.2667-17	chr6	5362323	5362616	+	0.1	NA	intron (NM_006567, intron 1 of 6)	L1MA8|LINE|L1	95606	NR_125846	101927972	Hs.668417	NR_125846	ENSG00000269985	LOC101927972	-	uncharacterized LOC101927972	ncRNA
45.1-2	chr18	55106535	55107120	+	0.1	NA	non-coding (NR_110743, exon 3 of 3)	non-coding (NR_110743, exon 3 of 3)	17479	NR_110743	101927229	Hs.638474	NR_110743	ENSG00000267013	LINC01929	-	long intergenic non-protein coding RNA 1929	ncRNA
20.0667-13	chr4	153051870	153052235	+	0.1	NA	Intergenic	THE1C|LTR|ERVL-MaLR	-100282	NM_001351056	23321	Hs.435711	NM_015271	ENSG00000109654	TRIM2	CMT2R|RNF86	tripartite motif containing 2	protein-coding
26.9666-3	chr5	38372537	38373193	+	0.1	NA	intron (NM_152403, intron 6 of 21)	intron (NM_152403, intron 6 of 21)	30606	NR_102749	100506475	Hs.662304	NR_102749	ENSG00000248572	EGFLAM-AS2	-	EGFLAM antisense RNA 2	ncRNA
20.2-4	chr15	40923189	40923570	+	0.1	NA	Intergenic	Intergenic	-5961	NM_019074	54567	Hs.511076	NM_019074	ENSG00000128917	DLL4	AOS6|delta4|hdelta2	delta like canonical Notch ligand 4	protein-coding
24.0333-2	chr10	12802796	12803282	+	0.1	NA	intron (NM_001351032, intron 8 of 11)	MIRb|SINE|MIR	-77686	NR_031752	100313841		NR_031752	ENSG00000221331	MIR548Q	-	microRNA 548q	ncRNA
20.3667-8	chr4	31971054	31971380	+	0.1	NA	Intergenic	Intergenic	-26162	NR_125936	102723828	Hs.575118	NR_125936	ENSG00000251129	LINC02506	-	long intergenic non-protein coding RNA 2506	ncRNA
32.9667-2	chr16	51990397	51990976	+	0.1	NA	Intergenic	L1PB3|LINE|L1	83249	NM_001242473	388276	Hs.534669	NM_001242473		C16orf97	-	chromosome 16 open reading frame 97	protein-coding
19.8-2	chr12	48876672	48877005	+	0.1	NA	Intergenic	AluSc|SINE|Alu	-10968	NM_014470	27289	Hs.124940	NM_014470	ENSG00000172602	RND1	ARHS|RHO6|RHOS	Rho family GTPase 1	protein-coding
17.9-5	chr15	95734841	95735232	+	0.1	NA	Intergenic	Intergenic	301943	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA
26.5667-5	chr14	51146774	51147282	+	0.1	NA	Intergenic	AluSz|SINE|Alu	-51324	NM_052978	114088	Hs.654750	NM_015163	ENSG00000100505	TRIM9	RNF91|SPRING	tripartite motif containing 9	protein-coding
19.7667-3	chr18	14096125	14096571	+	0.1	NA	intron (NR_033354, intron 1 of 5)	L1M3e|LINE|L1	36087	NM_145287	162655	Hs.352635	NM_145287	ENSG00000175322	ZNF519	HsT2362	zinc finger protein 519	protein-coding
15.4667-2	chr1	217908849	217909118	+	0.1	NA	intron (NR_048550, intron 1 of 3)	intron (NR_048550, intron 1 of 3)	16083	NR_048550	100885798	Hs.434632	NR_048550	ENSG00000231814	LINC00210	NCRNA00210	long intergenic non-protein coding RNA 210	ncRNA
20.8-18	chr7	3441699	3442097	+	0.1	NA	intron (NM_152744, intron 1 of 44)	intron (NM_152744, intron 1 of 44)	140646	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
37.9-3	chr2	146559298	146560007	+	0.1	NA	Intergenic	Intergenic	-27405	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
5.33333	chrX	21251620	21251699	+	0.1	NA	Intergenic	Intergenic	-122759	NM_001330770	22866	Hs.555917	NM_014927	ENSG00000149970	CNKSR2	CNK2|KSR2|MAGUIN|MRXSHG	connector enhancer of kinase suppressor of Ras 2	protein-coding
26.7-7	chr2	101768243	101768761	+	0.1	NA	intron (NM_145686, intron 2 of 30)	intron (NM_145686, intron 2 of 30)	70795	NM_004834	9448	Hs.701013	NM_004834	ENSG00000071054	MAP4K4	FLH21957|HEL-S-31|HGK|MEKKK4|NIK	mitogen-activated protein kinase kinase kinase kinase 4	protein-coding
19.2333-13	chr6	129124372	129124613	+	0.1	NA	intron (NM_000426, intron 4 of 64)	LTR40a|LTR|ERVL	241351	NM_000426	3908	Hs.200841	NM_000426	ENSG00000196569	LAMA2	LAMM|MDC1A	laminin subunit alpha 2	protein-coding
14.7333-11	chr8	133240275	133240601	+	0.1	NA	intron (NM_001135242, intron 15 of 15)	intron (NM_001135242, intron 15 of 15)	49399	NR_037944	8840	Hs.492974	NM_003882	ENSG00000104415	CCN4	WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc	cellular communication network factor 4	protein-coding
21.2667-2	chr15	61684440	61684880	+	0.1	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	-45258	NR_146448	100506530	Hs.42265	NR_146448	ENSG00000259284	LINC02349	-	long intergenic non-protein coding RNA 2349	ncRNA
13-4	chr19	57555116	57555328	+	0.1	NA	intron (NM_001277091, intron 2 of 5)	MER113|DNA|hAT-Charlie	4641	NM_001277092	162972	Hs.180257	NM_153231	ENSG00000251369	ZNF550	-	zinc finger protein 550	protein-coding
10.8667-2	chr12	60698876	60699088	+	0.1	NA	Intergenic	L1MD|LINE|L1	1009612	NR_073056	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
32.6333-4	chr5	150373362	150374052	+	0.1	NA	intron (NM_001008657, intron 7 of 17)	intron (NM_001008657, intron 7 of 17)	16010	NM_001135244	6949	Hs.519672	NM_000356	ENSG00000070814	TCOF1	MFD1|TCS|TCS1|treacle	treacle ribosome biogenesis factor 1	protein-coding
21.3333-10	chr7	98203066	98203359	+	0.1	NA	intron (NM_014916, intron 11 of 13)	L1MEf|LINE|L1	-9042	NM_177455	168620	Hs.511979	NM_177455	ENSG00000180535	BHLHA15	BHLHB8|MIST1	basic helix-loop-helix family member a15	protein-coding
44.3333-3	chr4	16544460	16545041	+	0.1	NA	intron (NM_001304435, intron 5 of 7)	L2a|LINE|L2	318087	NR_027697	202020	Hs.445315	NM_152684	ENSG00000263327	TAPT1-AS1	-	TAPT1 antisense RNA 1 (head to head)	ncRNA
29.4-10	chr6	11569639	11570202	+	0.1	NA	intron (NM_001100829, intron 2 of 2)	L1M5|LINE|L1	32171	NM_001100829	100113407	Hs.146317	NM_001100829	ENSG00000205269	TMEM170B	-	transmembrane protein 170B	protein-coding
26.8667-9	chr6	26275080	26275420	+	0.1	NA	Intergenic	AluJb|SINE|Alu	2274	NM_003525	8346	Hs.553506	NM_003525	ENSG00000278588	HIST1H2BI	H2B/k|H2BFK	histone cluster 1 H2B family member i	protein-coding
38.6333	chr7	27595783	27596255	+	0.1	NA	intron (NM_152740, intron 4 of 7)	L1ME4b|LINE|L1	-19955	NR_122123	790953	Hs.571330	NR_122122		TSL	-	testis-expressed, seven-twelve, leukemia	ncRNA
23.1-3	chr14	43643148	43643681	+	0.1	NA	Intergenic	L1PB2|LINE|L1	863869	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
39.2	chr1	27886466	27886980	+	0.1	NA	TTS (NM_001039477)	TTS (NM_001039477)	14179	NM_001105556	9473	Hs.10649	NM_004848	ENSG00000130775	THEMIS2	C1orf38|ICB-1|ICB1	thymocyte selection associated family member 2	protein-coding
24.0667-6	chr14	55511803	55512106	+	0.1	NA	Intergenic	AluSx|SINE|Alu	68138	NR_027123	100129075	Hs.633724	NR_027123	ENSG00000186615	KTN1-AS1	C14orf33|MYCLo-3	KTN1 antisense RNA 1	ncRNA
24.7-6	chr19	33706136	33706636	+	0.1	NA	intron (NM_001127895, intron 3 of 4)	intron (NM_001127895, intron 3 of 4)	21858	NM_022467	64377	Hs.165724	NM_022467	ENSG00000124302	CHST8	GALNAC4ST1|GalNAc4ST|PSS3	carbohydrate sulfotransferase 8	protein-coding
21.8-7	chr12	96002176	96002529	+	0.1	NA	intron (NR_132659, intron 18 of 18)	MADE1|DNA|TcMar-Mariner	-5987	NM_001258333	3034	Hs.190783	NM_002108	ENSG00000084110	HAL	HIS|HSTD	histidine ammonia-lyase	protein-coding
17.8667-13	chrX	47241632	47241922	+	0.1	NA	intron (NM_001371072, intron 9 of 20)	intron (NM_001371072, intron 9 of 20)	8768	NM_001371072								
44.6667-3	chr8	29276475	29276924	+	0.1	NA	Intergenic	AluSq|SINE|Alu	-13629	NM_015254	23303	Hs.444767	NM_015254	ENSG00000197892	KIF13B	GAKIN	kinesin family member 13B	protein-coding
23.1-10	chr21	30360841	30361172	+	0.1	NA	Intergenic	Intergenic	11265	NM_181621	337959	Hs.58152	NM_181621	ENSG00000182816	KRTAP13-2	KAP13-2	keratin associated protein 13-2	protein-coding
28.0333-7	chr5	163761145	163761738	+	0.1	NA	Intergenic	MER103C|DNA|hAT-Charlie	255822	NM_013283	27430	Hs.54642	NM_013283	ENSG00000038274	MAT2B	MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR	methionine adenosyltransferase 2B	protein-coding
32.5-7	chr2	127967761	127968307	+	0.1	NA	intron (NM_001330303, intron 14 of 19)	MER63D|DNA|hAT-Blackjack	59261	NM_001145928	79595	Hs.32995	NM_024545	ENSG00000136715	SAP130	-	Sin3A associated protein 130	protein-coding
25.9333-4	chr2	192456862	192457299	+	0.1	NA	Intergenic	L1M5|LINE|L1	-262147	NM_001305134	23671	Hs.144513	NM_016192	ENSG00000144339	TMEFF2	CT120.2|HPP1|TENB2|TPEF|TR|TR-2	transmembrane protein with EGF like and two follistatin like domains 2	protein-coding
15.4333-10	chr4	47506738	47507100	+	0.1	NA	intron (NM_020453, intron 1 of 22)	intron (NM_020453, intron 1 of 22)	21644	NM_020453	57205	Hs.437241	NM_020453	ENSG00000145246	ATP10D	ATPVD	ATPase phospholipid transporting 10D (putative)	protein-coding
32.9-12	chr8	131246717	131247182	+	0.1	NA	Intergenic	Intergenic	-206040	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
49.4333	chr2	75609597	75610555	+	0.1	NA	Intergenic	LTR78|LTR|ERV1	-36707	NM_014763	9801	Hs.44024	NM_014763	ENSG00000115364	MRPL19	L19mt|MRP-L15|MRP-L19|MRPL15|RLX1|RPML15	mitochondrial ribosomal protein L19	protein-coding
37.9333-4	chr3	177582562	177583118	+	0.1	NA	intron (NR_047568, intron 2 of 3)	L1MEc|LINE|L1	140919	NR_047568	100505566	Hs.581170	NR_047568		LINC00578	-	long intergenic non-protein coding RNA 578	ncRNA
24.8667-10	chr7	105313105	105313370	+	0.1	NA	intron (NM_001350746, intron 2 of 14)	AluSx|SINE|Alu	-14458	NM_001278273	6733	Hs.285197	NM_182691	ENSG00000135250	SRPK2	SFRSK2	SRSF protein kinase 2	protein-coding
30.1667-2	chr2	70013755	70014158	+	0.1	NA	intron (NR_033872, intron 7 of 10)	Charlie1a|DNA|hAT-Charlie	-51691	NM_152792	151516	Hs.516253	NM_152792	ENSG00000244617	ASPRV1	MUNO|SASP|SASPase|Taps	aspartic peptidase retroviral like 1	protein-coding
28.8-6	chr2	52306333	52306784	+	0.1	NA	intron (NR_135237, intron 7 of 10)	(CTAT)n|Simple_repeat|Simple_repeat	-64090	NR_135239	105374596		NR_135239	ENSG00000225444	LINC01867	-	long intergenic non-protein coding RNA 1867	ncRNA
33.3-2	chr22	34079086	34079516	+	0.1	NA	Intergenic	L1PB4|LINE|L1	-156413	NM_001362949	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding
22.5333-15	chr5	2717064	2717353	+	0.1	NA	Intergenic	Intergenic	4617	NR_145480	101234261		NR_145480	ENSG00000281560	LSINCT5	-	long stress-induced non-coding transcript 5	ncRNA
22.6333-8	chr17	71894807	71895218	+	0.1	NA	Intergenic	Intergenic	130967	NR_110876	102723505	Hs.547482	NR_110876		ROCR	LINC02095	regulator of chondrogenesis RNA	ncRNA
25.4667-11	chr9	119820241	119820607	+	0.1	NA	Intergenic	L2c|LINE|L2	-114636	NR_132393	106146149	Hs.638938	NR_132393	ENSG00000261432	LINC01613	n341773	long intergenic non-protein coding RNA 1613	ncRNA
23.2333-4	chr2	35192330	35192844	+	0.1	NA	Intergenic	Intergenic	-278818	NR_039629	100616475		NR_039629	ENSG00000265301	MIR548AD	-	microRNA 548ad	ncRNA
11.2333	chr10	50362632	50362811	+	0.1	NA	intron (NM_147156, intron 6 of 10)	intron (NM_147156, intron 6 of 10)	-114111	NM_001143974	56624	Hs.512645	NM_019893	ENSG00000188611	ASAH2	BCDase|HNAC1|LCDase|N-CDase|NCDase	N-acylsphingosine amidohydrolase 2	protein-coding
18.6667-10	chr22	32869341	32869528	+	0.1	NA	intron (NM_003490, intron 4 of 13)	intron (NM_003490, intron 4 of 13)	68618	NM_000362	7078	Hs.644633	NM_000362	ENSG00000100234	TIMP3	HSMRK222|K222|K222TA2|SFD	TIMP metallopeptidase inhibitor 3	protein-coding
29.8-6	chr21	28931088	28931627	+	0.1	NA	intron (NM_015565, intron 28 of 29)	intron (NM_015565, intron 28 of 29)	-45984	NM_182749	29104	Hs.163846	NM_013240	ENSG00000156239	N6AMT1	C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P	N-6 adenine-specific DNA methyltransferase 1	protein-coding
31.8667	chr10	82460485	82460888	+	0.1	NA	intron (NR_163253, intron 3 of 10)	intron (NR_163253, intron 3 of 10)	-227766	NR_120666	101929590	Hs.733268	NR_120666	ENSG00000225738	NRG3-AS1	C10orf100|Em:AC010157.1	NRG3 antisense RNA 1	ncRNA
13.5-3	chr14	88439819	88440095	+	0.1	NA	Intergenic	Intergenic	54300	NM_018418	55812	Hs.525518	NM_018418	ENSG00000042317	SPATA7	HEL-S-296|HSD-3.1|HSD3|LCA3	spermatogenesis associated 7	protein-coding
34.2667-8	chr4	89940894	89941430	+	0.1	NA	intron (NM_001371403, intron 7 of 8)	L4_A_Mam|LINE|RTE-X	46308	NM_007351	22915	Hs.268107	NM_007351	ENSG00000138722	MMRN1	ECM|EMILIN4|GPIa*|MMRN	multimerin 1	protein-coding
31.4333-5	chr4	108074825	108075462	+	0.1	NA	intron (NM_001130713, intron 7 of 10)	intron (NM_001130713, intron 7 of 10)	70479	NM_001331027	3033	Hs.438289	NM_005327	ENSG00000138796	HADH	HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD	hydroxyacyl-CoA dehydrogenase	protein-coding
26.3667-3	chr15	73161280	73161605	+	0.1	NA	intron (NM_002499, intron 5 of 28)	intron (NM_002499, intron 5 of 28)	108958	NM_001172623	4756	Hs.388613	NM_002499	ENSG00000067141	NEO1	IGDCC2|NGN|NTN1R2	neogenin 1	protein-coding
19.5-9	chr8	58073996	58074342	+	0.1	NA	intron (NM_147189, intron 3 of 4)	intron (NM_147189, intron 3 of 4)	79646	NM_147189	90362	Hs.154652	NM_147189	ENSG00000169122	FAM110B	C8orf72	family with sequence similarity 110 member B	protein-coding
23.9667-8	chr5	23357291	23357576	+	0.1	NA	Intergenic	Intergenic	-150176	NM_020227	56979	Hs.283096	NM_020227	ENSG00000164256	PRDM9	KMT8B|MEISETZ|MSBP3|PFM6|ZNF899	PR/SET domain 9	protein-coding
19.8333-8	chr2	119773282	119773695	+	0.1	NA	intron (NM_002830, intron 1 of 26)	AluSg|SINE|Alu	13566	NM_002830	5775	Hs.469809	NM_002830	ENSG00000088179	PTPN4	MEG|PTPMEG|PTPMEG1	protein tyrosine phosphatase non-receptor type 4	protein-coding
13.3667-3	chr11	101366170	101366388	+	0.1	NA	Intergenic	L1P3|LINE|L1	153626	NR_037485	100500823		NR_037485	ENSG00000263885	MIR3920	-	microRNA 3920	ncRNA
11.6-8	chr5	17956663	17956849	+	0.1	NA	Intergenic	Intergenic	149482	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
21.4	chr1	113373363	113373721	+	0.1	NA	Intergenic	Intergenic	-16973	NM_001142782	260425	Hs.486189	NM_020965	ENSG00000081026	MAGI3	MAGI-3|dJ730K3.2	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
35.8667-2	chr2	9429274	9429845	+	0.1	NA	intron (NM_016207, intron 2 of 17)	intron (NM_016207, intron 2 of 17)	5905	NM_016207	51692	Hs.515972	NM_016207	ENSG00000119203	CPSF3	CPSF-73|CPSF73	cleavage and polyadenylation specific factor 3	protein-coding
37.7667-2	chr8	19884008	19884458	+	0.1	NA	Intergenic	AluSz|SINE|Alu	-55020	NM_000237	4023	Hs.180878	NM_000237	ENSG00000175445	LPL	HDLCQ11|LIPD	lipoprotein lipase	protein-coding
20.2-2	chr10	125043133	125043494	+	0.1	NA	intron (NM_001321013, intron 1 of 9)	intron (NM_001321013, intron 1 of 9)	-10443	NR_036178	100423041		NR_036178	ENSG00000264572	MIR4296	-	microRNA 4296	ncRNA
23.5667-10	chr7	55662512	55662846	+	0.1	NA	Intergenic	L1M2b|LINE|L1	25353	NR_027340	360132	Hs.446691	NM_182827	ENSG00000176826	FKBP9P1	FKBP9L	FKBP prolyl isomerase 9 pseudogene 1	pseudo
58-3	chr3	143997835	143998943	+	0.1	NA	Intergenic	LTR79|LTR|ERVL	25308	NM_001134470	205428	Hs.288954	NM_173552	ENSG00000181744	DIPK2A	C3orf58|DIA1|GoPro49|HASF	divergent protein kinase domain 2A	protein-coding
14.3-9	chr4	70298340	70298667	+	0.1	NA	Intergenic	Intergenic	-36478	NM_033122	85438	Hs.120316	NM_033122	ENSG00000145309	CABS1	C4orf35|CLPH|NYD-SP26	calcium binding protein, spermatid associated 1	protein-coding
14.6333-6	chr17	14583686	14583856	+	0.1	NA	Intergenic	MamTip1|DNA|hAT-Tip100	280031	NR_026880	84815	Hs.597458	NM_032729	ENSG00000266709	MGC12916	-	uncharacterized protein MGC12916	ncRNA
11.5-5	chr17	72033807	72034043	+	0.1	NA	TTS (NR_110877)	TTS (NR_110877)	3271	NR_110124	102606463	Hs.512309	NR_110124	ENSG00000256124	LINC01152	CMPD|TCONS_00025128	long intergenic non-protein coding RNA 1152	ncRNA
28.1-10	chr6	162156986	162157368	+	0.1	NA	intron (NM_004562, intron 4 of 11)	intron (NM_004562, intron 4 of 11)	-569955	NM_152410	135138	Hs.25791	NM_152410	ENSG00000112530	PACRG	GLUP|HAK005771|PACRG2.1|PARK2CRG	parkin coregulated	protein-coding
22.6-11	chr20	20711275	20711664	+	0.1	NA	intron (NM_020343, intron 1 of 39)	intron (NM_020343, intron 1 of 39)	1175	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding
22.4667-9	chr6	37494768	37495065	+	0.1	NA	intron (NM_138493, intron 1 of 3)	AluSz|SINE|Alu	4977	NM_138493	154467	Hs.284207	NM_138493	ENSG00000198937	CCDC167	C6orf129|HSPC265	coiled-coil domain containing 167	protein-coding
18.6667-11	chr3	159987077	159987399	+	0.1	NA	intron (NR_108088, intron 9 of 9)	intron (NR_108088, intron 9 of 9)	-1597	NM_001354583	3592	Hs.673	NM_000882	ENSG00000168811	IL12A	CLMF|IL-12A|NFSK|NKSF1|P35	interleukin 12A	protein-coding
16.7667-13	chr8	127779418	127779745	+	0.1	NA	Intergenic	AluSz6|SINE|Alu	-14952	NR_003367	5820	Hs.133107	NR_003367	ENSG00000249859	PVT1	LINC00079|MIR1204HG|NCRNA00079|onco-lncRNA-100	Pvt1 oncogene	ncRNA
29.1667-14	chr8	25904844	25905233	+	0.1	NA	intron (NM_022659, intron 7 of 15)	L1MB7|LINE|L1	140375	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	EBF transcription factor 2	protein-coding
33.4667-11	chr9	124430963	124431432	+	0.1	NA	Intergenic	AluSx1|SINE|Alu	-15755	NM_002799	5695	Hs.213470	NM_002799	ENSG00000136930	PSMB7	Z	proteasome subunit beta 7	protein-coding
29.2333-5	chr2	158425627	158426133	+	0.1	NA	intron (NM_138803, intron 1 of 13)	intron (NM_138803, intron 1 of 13)	30873	NM_001301684	130940	Hs.668597	NM_138803	ENSG00000153237	CCDC148	-	coiled-coil domain containing 148	protein-coding
24.3333-12	chr8	137681772	137682169	+	0.1	NA	Intergenic	Intergenic	-268382	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
34.3667-3	chr9	126595178	126595858	+	0.1	NA	Intergenic	L1MC5|LINE|L1	-18925	NM_001174146	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding
22.1333-13	chr5	116578185	116578721	+	0.1	NA	intron (NR_147170, intron 1 of 2)	MER5B|DNA|hAT-Charlie	-3630	NM_020796	57556	Hs.156967	NM_020681	ENSG00000092421	SEMA6A	HT018|SEMA|SEMA6A1|SEMAQ|VIA	semaphorin 6A	protein-coding
23.4333-7	chr2	183688262	183688547	+	0.1	NA	Intergenic	L1MA2|LINE|L1	563961	NM_138285	129401	Hs.180591	NM_138285	ENSG00000163002	NUP35	MP-44|MP44|NP44|NUP53	nucleoporin 35	protein-coding
25.3333-14	chr7	62404785	62405312	+	0.1	NA	Intergenic	Intergenic	899008	NR_003952	643955	Hs.583308	NR_003952	ENSG00000185037	ZNF733P	ZNF733	zinc finger protein 733, pseudogene	pseudo
13.5333-10	chr2	54820741	54820973	+	0.1	NA	intron (NM_001039753, intron 4 of 40)	intron (NM_001039753, intron 4 of 40)	95845	NM_001039753	400954	Hs.656692	NM_001039753	ENSG00000214595	EML6	-	EMAP like 6	protein-coding
21.0667-2	chr13	51706217	51706587	+	0.1	NA	intron (NM_052950, intron 4 of 11)	L1MEc|LINE|L1	97760	NM_024705	79758	Hs.266728	NM_024705	ENSG00000102796	DHRS12	SDR40C1	dehydrogenase/reductase 12	protein-coding
19.7667-2	chr1	174913623	174913975	+	0.1	NA	intron (NM_001366451, intron 5 of 12)	intron (NM_001366451, intron 5 of 12)	38281	NM_001035230	9910	Hs.585378	NM_014857	ENSG00000152061	RABGAP1L	HHL|TBC1D18	RAB GTPase activating protein 1 like	protein-coding
19.1-4	chr10	6411450	6411730	+	0.1	NA	intron (NM_001323267, intron 17 of 17)	intron (NM_001323267, intron 17 of 17)	61274	NR_148966	399716	Hs.737229	NR_148966		LINC02656	-	long intergenic non-protein coding RNA 2656	ncRNA
22.4667	chr1	29599066	29599446	+	0.1	NA	Intergenic	Intergenic	-249142	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA
24.8-10	chr8	57495331	57495766	+	0.1	NA	Intergenic	Intergenic	151761	NR_125818	101929488	Hs.407557	NR_125818	ENSG00000253871	LOC101929488	-	uncharacterized LOC101929488	ncRNA
15.6333-6	chr13	85568561	85568811	+	0.1	NA	Intergenic	Intergenic	205083	NR_046989	100874137	Hs.742643	NR_046989	ENSG00000226317	LINC00351	-	long intergenic non-protein coding RNA 351	ncRNA
17.1-12	chr2	164418104	164418496	+	0.1	NA	Intergenic	L2a|LINE|L2	150195	NM_001303422	2888	Hs.411881	NM_004490	ENSG00000115290	GRB14	-	growth factor receptor bound protein 14	protein-coding
22.4333-4	chr11	114237929	114238343	+	0.1	NA	intron (NM_006006, intron 4 of 6)	intron (NM_006006, intron 4 of 6)	-57677	NM_006169	4837	Hs.503911	NM_006169	ENSG00000166741	NNMT	-	nicotinamide N-methyltransferase	protein-coding
17.4667-2	chr1	97455482	97455737	+	0.1	NA	intron (NM_000110, intron 13 of 22)	intron (NM_000110, intron 13 of 22)	-341312	NR_046591	100873933	Hs.568669	NR_046591	ENSG00000235777	DPYD-AS2	-	DPYD antisense RNA 2	ncRNA
34.4333-7	chr15	85399869	85400302	+	0.1	NA	intron (NM_007200, intron 1 of 36)	AluJr|SINE|Alu	19482	NM_006738	11214	Hs.459211	NM_006738	ENSG00000170776	AKAP13	AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47	A-kinase anchoring protein 13	protein-coding
33.7667-6	chr2	123636955	123637467	+	0.1	NA	Intergenic	Intergenic	387963	NR_147976	107985820	Hs.637705	NR_147976		LOC107985820	-	uncharacterized LOC107985820	ncRNA
32.5667-4	chr21	31003203	31003818	+	0.1	NA	Intergenic	Intergenic	34966	NM_001099219	728299	Hs.580875	NM_001099219	ENSG00000206102	KRTAP19-8	-	keratin associated protein 19-8	protein-coding
15.7-13	chr7	81036757	81037105	+	0.1	NA	Intergenic	Intergenic	-114542	NM_001350120	10512	Hs.269109	NM_006379	ENSG00000075223	SEMA3C	SEMAE|SemE	semaphorin 3C	protein-coding
13.9333-6	chr2	134141608	134141861	+	0.1	NA	intron (NM_001371457, intron 1 of 16)	L2c|LINE|L2	14609	NR_037450	100500878		NR_037450	ENSG00000263813	MIR3679	mir-3679	microRNA 3679	ncRNA
34-2	chr10	51207917	51208505	+	0.1	NA	intron (NM_001098512, intron 2 of 17)	intron (NM_001098512, intron 2 of 17)	-91362	NR_030336	693190		NR_030336	ENSG00000207813	MIR605	MIRN605|hsa-mir-605|mir-605	microRNA 605	ncRNA
21.0667-6	chr22	35322355	35322839	+	0.1	NA	intron (NM_001135732, intron 3 of 14)	intron (NM_001135732, intron 3 of 14)	-13043	NR_037471	100500826		NR_037471	ENSG00000266320	MIR3909	mir-3909	microRNA 3909	ncRNA
25.5667-17	chr8	111791017	111791589	+	0.1	NA	Intergenic	L2a|LINE|L2	414664	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
15.7333-18	chr8	90579991	90580270	+	0.1	NA	Intergenic	Intergenic	25933	NR_104062	101937451	Hs.583685	NR_104062	ENSG00000253799	LINC01030	-	long intergenic non-protein coding RNA 1030	ncRNA
15.3-13	chr9	22342874	22343082	+	0.1	NA	Intergenic	AmnSINE1|SINE|5S-Deu-L2	-103846	NM_022160	63951	Hs.371976	NM_022160	ENSG00000176399	DMRTA1	DMO|DMRT4	DMRT like family A1	protein-coding
13.7333-5	chr21	36109179	36109397	+	0.1	NA	non-coding (NR_147887, exon 2 of 2)	non-coding (NR_147887, exon 2 of 2)	4407	NR_147887	105369306		NR_147887	ENSG00000233393	LOC105369306	-	uncharacterized LOC105369306	ncRNA
18.3667-10	chr5	10511246	10511638	+	0.1	NA	intron (NR_134289, intron 1 of 2)	intron (NR_134289, intron 1 of 2)	-2248	NR_134290	389273	Hs.519206	NR_134289	ENSG00000249160	LINC02213	-	long intergenic non-protein coding RNA 2213	ncRNA
9	chr2	68206918	68207063	+	0.1	NA	intron (NM_000945, intron 2 of 5)	intron (NM_000945, intron 2 of 5)	45542	NM_000945	5534	Hs.280604	NM_000945	ENSG00000221823	PPP3R1	CALNB1|CNB|CNB1	protein phosphatase 3 regulatory subunit B, alpha	protein-coding
27.8333-6	chr3	87505178	87505819	+	0.1	NA	Intergenic	Intergenic	-228914	NM_001122757	5449	Hs.591654	NM_000306	ENSG00000064835	POU1F1	CPHD1|GHF-1|PIT1|POU1F1a|Pit-1	POU class 1 homeobox 1	protein-coding
18.5-9	chr5	129844058	129844274	+	0.1	NA	Intergenic	L2b|LINE|L2	-60299	NM_175856	337876	Hs.213137	NM_175856	ENSG00000198108	CHSY3	CHSY2|CSS3	chondroitin sulfate synthase 3	protein-coding
45.1667-2	chr2	85273455	85274200	+	0.1	NA	intron (NM_031283, intron 3 of 11)	intron (NM_031283, intron 3 of 11)	54162	NM_001206844	10618	Hs.593382	NM_006464	ENSG00000152291	TGOLN2	TGN38|TGN46|TGN48|TGN51|TTGN2	trans-golgi network protein 2	protein-coding
15.6333-9	chr16	81910998	81911299	+	0.1	NA	intron (NM_002661, intron 18 of 32)	intron (NM_002661, intron 18 of 32)	100322	NM_145168	93517	Hs.87779	NM_145168	ENSG00000184860	SDR42E1	HSPC105	short chain dehydrogenase/reductase family 42E, member 1	protein-coding
42.1333-2	chr5	88097314	88097861	+	0.1	NA	Intergenic	LTR33C|LTR|ERVL	171258	NM_001289007	153396	Hs.379972	NM_153354	ENSG00000164180	TMEM161B	FLB3342|PRO1313	transmembrane protein 161B	protein-coding
34.6667-11	chr2	191904365	191905028	+	0.1	NA	Intergenic	L1M5|LINE|L1	-57608	NM_004657	8436	Hs.26530	NM_004657	ENSG00000168497	CAVIN2	PS-p68|SDPR|SDR|cavin-2	caveolae associated protein 2	protein-coding
17.2-11	chr7	73827548	73827862	+	0.1	NA	Intergenic	Intergenic	-3158	NM_001305	1364	Hs.647036	NM_001305	ENSG00000189143	CLDN4	CPE-R|CPER|CPETR|CPETR1|WBSCR8|hCPE-R	claudin 4	protein-coding
19.5-2	chr10	44006915	44007133	+	0.1	NA	Intergenic	Intergenic	94622	NR_136148	283033	Hs.178244	NR_033846		LINC00841	-	long intergenic non-protein coding RNA 841	ncRNA
8.63333-6	chr4	159916813	159916959	+	0.1	NA	Intergenic	Intergenic	-139102	NR_146278	109729132		NR_146278	ENSG00000250488	LINC02233	-	long intergenic non-protein coding RNA 2233	ncRNA
23.2667-2	chr1	48444693	48445137	+	0.1	NA	intron (NM_019073, intron 3 of 12)	intron (NM_019073, intron 3 of 12)	27289	NM_019073	54558	Hs.538103	NM_019073	ENSG00000132122	SPATA6	HASH|SRF-1|SRF1	spermatogenesis associated 6	protein-coding
25.2667-15	chr8	84001060	84001475	+	0.1	NA	Intergenic	L1P4d|LINE|L1	-181520	NM_001354325	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
22.7333-2	chr16	3356630	3356914	+	0.1	NA	exon (NM_012368, exon 1 of 1)	exon (NM_012368, exon 1 of 1)	883	NM_012368	4993	Hs.258574	NM_012368	ENSG00000168158	OR2C1	OLFmf3|OR2C2P	olfactory receptor family 2 subfamily C member 1	protein-coding
36.7	chr11	31858022	31858575	+	0.1	NA	intron (NR_033971, intron 1 of 2)	intron (NR_033971, intron 1 of 2)	31731	NR_117094	103157000		NR_117094	ENSG00000281880	PAUPAR	-	PAX6 upstream antisense RNA	ncRNA
25.8666-5	chr6	23968937	23969542	+	0.1	NA	Intergenic	Intergenic	-156976	NM_080723	140767	Hs.726270	NM_080723	ENSG00000152954	NRSN1	VMP|p24	neurensin 1	protein-coding
29.3	chr1	109579725	109580230	+	0.1	NA	intron (NM_006496, intron 4 of 8)	intron (NM_006496, intron 4 of 8)	-18916	NR_029583	406974		NR_029583	ENSG00000284443	MIR197	MIRN197|miR-197|miRNA197	microRNA 197	ncRNA
37.9-2	chr17	56185646	56186088	+	0.1	NA	intron (NM_001365758, intron 2 of 20)	intron (NM_001365758, intron 2 of 20)	32392	NM_153228	162282	Hs.673040	NM_153228	ENSG00000153930	ANKFN1	-	ankyrin repeat and fibronectin type III domain containing 1	protein-coding
34.7667-6	chr14	47206066	47206604	+	0.1	NA	intron (NM_001113498, intron 3 of 16)	AluJr|SINE|Alu	136911	NM_182830	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
16.1667-6	chr13	36614124	36614502	+	0.1	NA	Intergenic	Intergenic	-59707	NM_203451	400120	Hs.422375	NM_203451	ENSG00000180440	SERTM1	C13orf36	serine rich and transmembrane domain containing 1	protein-coding
23.8667-8	chr4	152946204	152946531	+	0.1	NA	intron (NM_001371116, intron 2 of 11)	intron (NM_001371116, intron 2 of 11)	3384	NM_033393	85462	Hs.132629	NM_033393	ENSG00000137460	FHDC1	-	FH2 domain containing 1	protein-coding
16.0333-3	chr12	113107368	113107620	+	0.1	NA	intron (NM_004658, intron 15 of 21)	AluSz|SINE|Alu	28105	NM_001301202	8437	Hs.528693	NM_004658	ENSG00000111344	RASAL1	RASAL	RAS protein activator like 1	protein-coding
21.5333	chr10	118434503	118434940	+	0.1	NA	Intergenic	L1M5|LINE|L1	77613	NR_108045	100506126	Hs.69494	NR_108045	ENSG00000232139	LINC00867	-	long intergenic non-protein coding RNA 867	ncRNA
12.9333-10	chr8	123617201	123617378	+	0.1	NA	Intergenic	L1MC4|LINE|L1	36512	NM_001081675	340359	Hs.450252	NM_001081675	ENSG00000175946	KLHL38	C8ORFK36	kelch like family member 38	protein-coding
13.1667-3	chr10	63906746	63907067	+	0.1	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-385016	NM_001322258	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding
23.4667-10	chr8	111475950	111476485	+	0.1	NA	Intergenic	LTR43-int|LTR|ERV1	99578	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
25.0333-4	chr12	12788478	12788783	+	0.1	NA	3' UTR (NM_001130415, exon 2 of 2)	3' UTR (NM_001130415, exon 2 of 2)	2971	NM_030817	81575	Hs.23388	NM_030817	ENSG00000178878	APOLD1	VERGE	apolipoprotein L domain containing 1	protein-coding
22.1-4	chr15	41747447	41747935	+	0.1	NA	intron (NM_001164273, intron 15 of 23)	AluJo|SINE|Alu	-26793	NM_001128608	23005	Hs.513661	NM_014994	ENSG00000137802	MAPKBP1	JNKBP-1|JNKBP1|NPHP20	mitogen-activated protein kinase binding protein 1	protein-coding
39.8333-5	chr6	148780933	148781396	+	0.1	NA	intron (NM_005715, intron 1 of 7)	Tigger1|DNA|TcMar-Tigger	34134	NM_005715	10090	Hs.657370	NM_005715	ENSG00000111962	UST	2OST	uronyl 2-sulfotransferase	protein-coding
29.3-5	chr2	25850963	25851384	+	0.1	NA	intron (NM_018263, intron 1 of 11)	AluSq|SINE|Alu	-20272	NM_001369346	55252	Hs.119815	NM_018263	ENSG00000143970	ASXL2	ASXH2|SHAPNS	ASXL transcriptional regulator 2	protein-coding
48.5333-4	chr3	42232413	42233175	+	0.1	NA	Intergenic	Charlie10|DNA|hAT-Charlie	31153	NM_001174138	885	Hs.458426	NM_000729	ENSG00000187094	CCK	-	cholecystokinin	protein-coding
27.2667-10	chr2	95083243	95083712	+	0.1	NA	Intergenic	L1MCa|LINE|L1	38080	NM_001321997	64969	Hs.655259	NM_031902	ENSG00000144029	MRPS5	MRP-S5|S5mt	mitochondrial ribosomal protein S5	protein-coding
23.3-8	chr3	116261280	116261869	+	0.1	NA	intron (NM_001318915, intron 1 of 8)	intron (NM_001318915, intron 1 of 8)	-98450	NR_109998	101926903	Hs.26479	NR_109998	ENSG00000240922	LSAMP-AS1	-	LSAMP antisense RNA 1	ncRNA
28.1-3	chr12	34491767	34492096	+	0.1	NA	Intergenic	ALR/Alpha|Satellite|centr	469435	NM_032834	84920	Hs.102971	NM_032834	ENSG00000139133	ALG10	ALG10A|DIE2|KCR1	ALG10 alpha-1,2-glucosyltransferase	protein-coding
14-12	chr6	40072518	40072730	+	0.1	NA	Intergenic	L1PB1|LINE|L1	-138162	NM_001075098	4337	Hs.357128	NM_005942	ENSG00000124615	MOCS1	MIG11|MOCOD|MOCS1A|MOCS1B	molybdenum cofactor synthesis 1	protein-coding
41.4333-2	chr4	62460243	62460993	+	0.1	NA	Intergenic	MER92B|LTR|ERV1	-298853	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
31.0333-5	chr22	34048730	34049328	+	0.1	NA	Intergenic	Intergenic	-126141	NM_001362949	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding
24.8667	chr11	18234742	18235097	+	0.1	NA	intron (NM_001199744, intron 4 of 5)	MER5A|DNA|hAT-Charlie	1883	NM_006512	6291	Hs.1955	NM_006512	ENSG00000148965	SAA4	C-SAA|CSAA	serum amyloid A4, constitutive	protein-coding
24.9-13	chr7	38751541	38751921	+	0.1	NA	intron (NM_014396, intron 22 of 28)	intron (NM_014396, intron 22 of 28)	-64642	NR_028347	340286	Hs.144075	NM_001105282	ENSG00000164556	FAM183BP	FAM183B|THEG6	acyloxyacyl hydrolase (neutrophil)	pseudo
53.5-4	chrUn_KI270442v1	77009	77705	+	0.1	NA	NA	(AATGG)n|Simple_repeat|Simple_repeat	NA	NA								
30.3333	chr12	107670427	107670943	+	0.1	NA	Intergenic	Intergenic	-15047	NM_001317963	11137	Hs.506652	NM_007062	ENSG00000136045	PWP1	IEF-SSP-9502	PWP1 homolog, endonuclein	protein-coding
34.4667	chr14	54050829	54051336	+	0.1	NA	Intergenic	Intergenic	-94191	NM_001347913	652	Hs.68879	NM_001202	ENSG00000125378	BMP4	BMP2B|BMP2B1|MCOPS6|OFC11|ZYME	bone morphogenetic protein 4	protein-coding
22.0333-6	chr20	40331436	40331770	+	0.1	NA	Intergenic	Intergenic	327142	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA
28.4333-3	chr17	71472333	71472769	+	0.1	NA	Intergenic	MIRb|SINE|MIR	-270372	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility 17	ncRNA
22.6-21	chr8	66086202	66086593	+	0.1	NA	intron (NM_001349432, intron 5 of 5)	MER45A|DNA|hAT-Tip100	-40732	NM_033058	84675	Hs.85524	NM_033058	ENSG00000147573	TRIM55	MURF-2|RNF29|muRF2	tripartite motif containing 55	protein-coding
15-6	chr20	57639747	57640036	+	0.1	NA	Intergenic	L1MC3|LINE|L1	-19465	NM_001160417	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding
24.0333-7	chr14	88875351	88875794	+	0.1	NA	intron (NR_159362, intron 14 of 14)	intron (NR_159362, intron 14 of 14)	50921	NR_159362	123016	Hs.303055	NM_144596	ENSG00000165533	TTC8	BBS8|RP51	tetratricopeptide repeat domain 8	protein-coding
11.6333-5	chr7	104105923	104106149	+	0.1	NA	Intergenic	Intergenic	101977	NM_002553	5001	Hs.432948	NM_002553	ENSG00000164815	ORC5	ORC5L|ORC5P|ORC5T|PPP1R117	origin recognition complex subunit 5	protein-coding
33.6333-5	chr4	101117351	101117907	+	0.1	NA	intron (NM_001130691, intron 2 of 12)	intron (NM_001130691, intron 2 of 12)	123243	NR_107033	102465868		NR_107033	ENSG00000273882	MIR8066	hsa-mir-8066	microRNA 8066	ncRNA
20.7-4	chr5	27106625	27106991	+	0.1	NA	Intergenic	AluSq2|SINE|Alu	-68222	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
15.2667-15	chr9	88720222	88720473	+	0.1	NA	Intergenic	MER21C|LTR|ERVL	25558	NR_036252	100423015		NR_036252	ENSG00000265873	MIR4289	-	microRNA 4289	ncRNA
14.7333-6	chr2	46062095	46062404	+	0.1	NA	intron (NM_005400, intron 10 of 14)	L2b|LINE|L2	-235158	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding
14.9-12	chr5	65460537	65460748	+	0.1	NA	intron (NR_135689, intron 3 of 25)	intron (NR_135689, intron 3 of 25)	21278	NM_197941	11174	Hs.482291	NM_197941	ENSG00000049192	ADAMTS6	ADAM-TS 6|ADAM-TS6|ADAMTS-6	ADAM metallopeptidase with thrombospondin type 1 motif 6	protein-coding
40.0333-2	chr4	86281825	86282350	+	0.1	NA	intron (NM_001363657, intron 2 of 13)	intron (NM_001363657, intron 2 of 13)	72557	NM_001318067	5602	Hs.13438	NM_002753	ENSG00000109339	MAPK10	JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK	mitogen-activated protein kinase 10	protein-coding
10.7-4	chr2	208448923	208449046	+	0.1	NA	intron (NM_005048, intron 7 of 12)	intron (NM_005048, intron 7 of 12)	42154	NM_005048	5746	Hs.570296	NM_005048	ENSG00000144407	PTH2R	PTHR2	parathyroid hormone 2 receptor	protein-coding
34.2333-4	chr8	74322464	74322873	+	0.1	NA	Intergenic	Intergenic	-1128	NM_020647	56704	Hs.657367	NM_020647	ENSG00000104369	JPH1	CMT2K|JP-1|JP1	junctophilin 1	protein-coding
39.5667	chr15	33568720	33569333	+	0.1	NA	intron (NM_001243996, intron 12 of 102)	L1MB7|LINE|L1	258059	NM_001243996	6263	Hs.709373	NM_001036	ENSG00000198838	RYR3	RYR-3	ryanodine receptor 3	protein-coding
10.2333-2	chr7	68442307	68442527	+	0.0666667	NA	Intergenic	Intergenic	422164	NR_120514	102723427	Hs.583491	NR_120514	ENSG00000225209	LOC102723427	-	uncharacterized LOC102723427	ncRNA
9.9-2	chr2	96609484	96609659	+	0.0666667	NA	intron (NR_047656, intron 10 of 19)	intron (NR_047656, intron 10 of 19)	28420	NR_047658	55683	Hs.516341	NM_017991	ENSG00000114982	KANSL3	KIAA1310|NSL3|Rcd1	KAT8 regulatory NSL complex subunit 3	protein-coding
18.8333-11	chr3	101878396	101878738	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	29053	NM_031419	64332	Hs.319171	NM_031419	ENSG00000144802	NFKBIZ	IKBZ|INAP|MAIL	NFKB inhibitor zeta	protein-coding
21.2-17	chr3	122561187	122561643	+	0.0666667	NA	intron (NM_031458, intron 1 of 10)	AluJo|SINE|Alu	2885	NM_001146105	83666	Hs.518200	NM_031458	ENSG00000138496	PARP9	ARTD9|BAL|BAL1|MGC:7868	poly(ADP-ribose) polymerase family member 9	protein-coding
20.9-24	chr9	69237244	69237688	+	0.0666667	NA	intron (NM_001369870, intron 15 of 23)	AluJo|SINE|Alu	32311	NM_001369875	9414	Hs.50382	NM_004817	ENSG00000119139	TJP2	C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2	tight junction protein 2	protein-coding
17.1333-5	chr12	89663832	89664335	+	0.0666667	NA	intron (NM_001001323, intron 1 of 21)	Tigger19b|DNA|TcMar-Tigger	44755	NM_001366532	490	Hs.506276	NM_001682	ENSG00000070961	ATP2B1	PMCA1|PMCA1kb	ATPase plasma membrane Ca2+ transporting 1	protein-coding
11.6333-4	chr7	90273487	90273781	+	0.0666667	NA	intron (NM_001039706, intron 8 of 22)	MLT1A0|LTR|ERVL-MaLR	28460	NM_001160138	79846	Hs.521014	NM_024788	ENSG00000105792	CFAP69	C7orf63|FAP69|SPGF24	cilia and flagella associated protein 69	protein-coding
25.7667-5	chr19	40523572	40524235	+	0.0666667	NA	intron (NM_020971, intron 17 of 35)	AluSg|SINE|Alu	-6588	NM_025213	57731	Hs.32706	NM_020971	ENSG00000160460	SPTBN4	CMND|NEDHND|QV|SPNB4|SPTBN3	spectrin beta, non-erythrocytic 4	protein-coding
2.7	chr1	236606336	236606376	+	0.0666667	NA	Intergenic	Intergenic	-1840	NM_018072	55127	Hs.708114	NM_018072	ENSG00000119285	HEATR1	BAP28|UTP10	HEAT repeat containing 1	protein-coding
11.5667	chr1	222838568	222838850	+	0.0666667	NA	intron (NM_032890, intron 1 of 9)	AluJr4|SINE|Alu	23670	NM_001350630	84976	Hs.528817	NM_032890	ENSG00000154309	DISP1	DISPA	dispatched RND transporter family member 1	protein-coding
18.8333-14	chr5	59560921	59561379	+	0.0666667	NA	intron (NM_001349242, intron 1 of 16)	intron (NM_001349242, intron 1 of 16)	25348	NM_001349242	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
16.9333-9	chr18	8542408	8542729	+	0.0666667	NA	Intergenic	Intergenic	-66877	NM_001025300	201475	Hs.270074	NM_001025300	ENSG00000206418	RAB12	-	RAB12, member RAS oncogene family	protein-coding
9.5-4	chr2	241782194	241782380	+	0.0666667	NA	intron (NM_022134, intron 1 of 3)	MER4-int|LTR|ERV1	5465	NM_022134	64090	Hs.632556	NM_022134	ENSG00000154252	GAL3ST2	GAL3ST-2|GP3ST	galactose-3-O-sulfotransferase 2	protein-coding
20.2-14	chr8	137327723	137328096	+	0.0666667	NA	Intergenic	Intergenic	85679	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
13.6333-8	chr3	121325781	121325985	+	0.0666667	NA	intron (NM_001348343, intron 21 of 27)	MIRc|SINE|MIR	220105	NM_199420	10721	Hs.241517	NM_199420	ENSG00000051341	POLQ	PRO0327	DNA polymerase theta	protein-coding
18.5-4	chr14	69485416	69485795	+	0.0666667	NA	intron (NM_001161498, intron 1 of 12)	intron (NM_001161498, intron 1 of 12)	877	NM_001161498	400224	Hs.509796	NM_001161498	ENSG00000175985	PLEKHD1	UPF0639	pleckstrin homology and coiled-coil domain containing D1	protein-coding
6.93333-3	chr14	46412750	46412914	+	0.0666667	NA	intron (NR_102702, intron 3 of 3)	intron (NR_102702, intron 3 of 3)	-58527	NR_102699	100506412	Hs.207545	NR_102699	ENSG00000258700	LINC00871	-	long intergenic non-protein coding RNA 871	ncRNA
15.1667-8	chr22	22896687	22897052	+	0.0666667	NA	TTS (NM_001178126)	TTS (NM_001178126)	9053	NM_001178126	100423062	Hs.449574	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding
10.2-3	chr2	134937328	134937549	+	0.0666667	NA	intron (NR_135468, intron 3 of 9)	intron (NR_135468, intron 3 of 9)	18616	NM_001320749	905	Hs.744115	NM_001241	ENSG00000082258	CCNT2	CYCT2	cyclin T2	protein-coding
22.6667-8	chr7	27528069	27528563	+	0.0666667	NA	intron (NM_152740, intron 7 of 7)	Tigger1|DNA|TcMar-Tigger	-87658	NR_122123	790953	Hs.571330	NR_122122		TSL	-	testis-expressed, seven-twelve, leukemia	ncRNA
24.7333-3	chr13	87407319	87408031	+	0.0666667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	211065	NR_039722	100616182		NR_039722	ENSG00000266052	MIR4500	-	microRNA 4500	ncRNA
11.5-9	chr22	19598825	19598997	+	0.0666667	NA	Intergenic	Intergenic	-32072	NR_024381	150185	Hs.719752	NR_024381		LINC00895	-	long intergenic non-protein coding RNA 895	ncRNA
21.5333-6	chr5	20263866	20264403	+	0.0666667	NA	intron (NM_001349556, intron 1 of 13)	intron (NM_001349556, intron 1 of 13)	-41417	NR_146519	102725105		NR_146519		CDH18-AS1	-	CDH18 antisense RNA 1	ncRNA
25.4-12	chr21	22045205	22045750	+	0.0666667	NA	intron (NR_109959, intron 2 of 5)	intron (NR_109959, intron 2 of 5)	52982	NR_109959	101927843	Hs.652879	NR_109959	ENSG00000233215	LINC01687	-	long intergenic non-protein coding RNA 1687	ncRNA
23.9667-13	chr9	93298179	93298611	+	0.0666667	NA	intron (NM_006648, intron 23 of 28)	intron (NM_006648, intron 23 of 28)	47908	NM_001368813	445577	Hs.575636	NM_001098808	ENSG00000204352	C9orf129	bA165J3.3	chromosome 9 open reading frame 129	protein-coding
25.3666-2	chr17	57800368	57801116	+	0.0666667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	49302	NM_016070	51649	Hs.5836	NM_016070	ENSG00000181610	MRPS23	CGI-138|HSPC329|MRP-S23	mitochondrial ribosomal protein S23	protein-coding
9.53334	chr17	32039476	32039620	+	0.0666667	NA	promoter-TSS (NR_033412)	promoter-TSS (NR_033412)	-788	NR_033412	6458	Hs.672460	NR_033412		SH3GL1P1	CNSA-P1|SH3GLP1	SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 1	pseudo
11.8667	chr1	11990922	11991127	+	0.0666667	NA	intron (NM_001127660, intron 2 of 17)	intron (NM_001127660, intron 2 of 17)	10843	NM_001127660	9927	Hs.376681	NM_014874	ENSG00000116688	MFN2	CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF	mitofusin 2	protein-coding
22.3-11	chr8	89202543	89203137	+	0.0666667	NA	Intergenic	Intergenic	554871	NR_125822	101929709	Hs.651324	NR_125822	ENSG00000251136	LOC101929709	-	uncharacterized LOC101929709	ncRNA
9.8-2	chr17	74635035	74635243	+	0.0666667	NA	Intergenic	L1MDa|LINE|L1	-11401	NM_181449	342510	Hs.158954	NM_181449	ENSG00000186407	CD300E	CD300LE|CLM-2|CLM2|CMRF35-A5|IREM-2|IREM2|PIgR-2|PIgR2	CD300e molecule	protein-coding
17.1333-7	chr12	128675280	128675689	+	0.0666667	NA	intron (NM_001136103, intron 5 of 8)	intron (NM_001136103, intron 5 of 8)	148474	NM_145648	121260	Hs.507260	NM_145648	ENSG00000139370	SLC15A4	FP12591|PHT1|PTR4	solute carrier family 15 member 4	protein-coding
7.43334	chr18	36688010	36688122	+	0.0666667	NA	intron (NM_001281740, intron 16 of 28)	intron (NM_001281740, intron 16 of 28)	-24648	NR_132982	105372071		NR_132982		LOC105372071	-	uncharacterized LOC105372071	ncRNA
5-2	chr20	33309543	33309653	+	0.0666667	NA	intron (NM_033197, intron 15 of 15)	intron (NM_033197, intron 15 of 15)	26384	NM_033197	92747	Hs.65551	NM_033197	ENSG00000125999	BPIFB1	C20orf114|LPLUNC1	BPI fold containing family B member 1	protein-coding
17.1667-6	chr16	82065851	82066188	+	0.0666667	NA	intron (NM_002153, intron 1 of 4)	MamRep605|LTR?|LTR?	30766	NM_002153	3294	Hs.162795	NM_002153	ENSG00000086696	HSD17B2	EDH17B2|HSD17|SDR9C2	hydroxysteroid 17-beta dehydrogenase 2	protein-coding
9.56667-4	chr3	76542202	76542367	+	0.0666667	NA	Intergenic	Intergenic	-497815	NM_001290040	6092	Hs.13305	NM_002942	ENSG00000185008	ROBO2	SAX3	roundabout guidance receptor 2	protein-coding
12.4	chr11	17133528	17133810	+	0.0666667	NA	intron (NM_001321380, intron 10 of 31)	AluSz|SINE|Alu	-56002	NM_001017	6207	Hs.446588	NM_001017	ENSG00000110700	RPS13	S13	ribosomal protein S13	protein-coding
26.6-11	chr21	24484738	24485353	+	0.0666667	NA	intron (NR_135520, intron 4 of 5)	intron (NR_135520, intron 4 of 5)	56305	NR_135520	105372751	Hs.652040	NR_135519	ENSG00000237484	LINC01684	lnc-JAM2-6	long intergenic non-protein coding RNA 1684	ncRNA
9.73333-2	chr20	10695209	10695429	+	0.0666667	NA	Intergenic	Intergenic	-21320	NM_000214	182	Hs.224012	NM_000214	ENSG00000101384	JAG1	AGS|AGS1|AHD|AWS|CD339|DCHE|HJ1|JAGL1	jagged canonical Notch ligand 1	protein-coding
19.8333-11	chr4	71024928	71025324	+	0.0666667	NA	intron (NM_000788, intron 4 of 6)	intron (NM_000788, intron 4 of 6)	31477	NM_000788	1633	Hs.709	NM_000788	ENSG00000156136	DCK	-	deoxycytidine kinase	protein-coding
11.6667-8	chr6	6993927	6994102	+	0.0666667	NA	Intergenic	Intergenic	-113729	NM_001168344	6239	Hs.298248	NM_002955	ENSG00000124782	RREB1	FINB|HNT|LZ321|RREB-1|Zep-1	ras responsive element binding protein 1	protein-coding
11.5-11	chr6	167221107	167221369	+	0.0666667	NA	Intergenic	AluSx3|SINE|Alu	-7062	NR_157263	112590798		NR_157263		HPAT5	-	human pluripotency-associated transcript 5	ncRNA
26.1-13	chr5	58430778	58431328	+	0.0666667	NA	Intergenic	Intergenic	29033	NM_006622	10769	Hs.398157	NM_006622	ENSG00000145632	PLK2	SNK|hPlk2|hSNK	polo like kinase 2	protein-coding
5.1	chr15	57493200	57493345	+	0.0666667	NA	intron (NM_032866, intron 8 of 18)	intron (NM_032866, intron 8 of 18)	-98632	NR_104370	145781	Hs.437256	NM_001018090	ENSG00000137878	GCOM1	GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom	GRINL1A complex locus 1	protein-coding
15.6333-15	chr8	49611636	49611870	+	0.0666667	NA	Intergenic	L1MEc|LINE|L1	-99573	NR_134294	100507464	Hs.245745	NR_134294	ENSG00000253380	LOC100507464	-	uncharacterized LOC100507464	ncRNA
10.3333-4	chr2	116537042	116537220	+	0.0666667	NA	Intergenic	L1MA7|LINE|L1	1193316	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
12.3333-2	chr11	84194281	84194626	+	0.0666667	NA	intron (NM_001142700, intron 1 of 19)	LTR12D|LTR|ERV1	78827	NM_001142700	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
15.3667-9	chr3	189475167	189475561	+	0.0666667	NA	Intergenic	L1MEf|LINE|L1	-121382	NM_001329964	8626	Hs.137569	NM_003722	ENSG00000073282	TP63	AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L	tumor protein p63	protein-coding
26.6667-2	chr12	23407224	23407843	+	0.0666667	NA	Intergenic	L1MA9|LINE|L1	177053	NM_178010	6660	Hs.434948	NM_006940	ENSG00000134532	SOX5	L-SOX5|L-SOX5B|L-SOX5F|LAMSHF	SRY-box transcription factor 5	protein-coding
21.1667-7	chr13	107096562	107097115	+	0.0666667	NA	Intergenic	Intergenic	224125	NR_145739	109616978		NR_145739	ENSG00000201847	SNORD31B	-	small nucleolar RNA, C/D box 31B	snoRNA
8.26666-2	chr7	120539407	120539597	+	0.0666667	NA	intron (NM_012281, intron 1 of 5)	intron (NM_012281, intron 1 of 5)	266327	NM_012281	3751	Hs.654739	NM_012281	ENSG00000184408	KCND2	KV4.2|RK5	potassium voltage-gated channel subfamily D member 2	protein-coding
16.2-11	chr3	47859328	47859698	+	0.0666667	NA	intron (NM_002375, intron 15 of 18)	intron (NM_002375, intron 15 of 18)	9958	NR_031595	100302232		NR_031595	ENSG00000221585	MIR1226	MIRN1226|hsa-mir-1226|mir-1226	microRNA 1226	ncRNA
17.5333-8	chr2	174034081	174034456	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	8988	NR_136175	100128905	Hs.456944	NR_136175	ENSG00000260868	LINC01960	-	long intergenic non-protein coding RNA 1960	ncRNA
25.8333-5	chr19	23095807	23096289	+	0.0666667	NA	Intergenic	BSR/Beta|Satellite|Satellite	-20977	NM_001277403	100129543	Hs.427120	NM_001277403	ENSG00000183850	ZNF730	-	zinc finger protein 730	protein-coding
7.1-3	chr15	72414338	72414446	+	0.0666667	NA	intron (NR_135678, intron 2 of 3)	intron (NR_135678, intron 2 of 3)	16087	NR_148418	338949	Hs.446069	NM_001080462	ENSG00000187806	TMEM202	-	transmembrane protein 202	protein-coding
25.1333-7	chr14	63581882	63582432	+	0.0666667	NA	Intergenic	L1MB2|LINE|L1	-38762	NM_001354926	5529	Hs.334868	NM_006246	ENSG00000154001	PPP2R5E	B56E|B56epsilon	protein phosphatase 2 regulatory subunit B'epsilon	protein-coding
12.4-3	chr12	31359193	31359529	+	0.0666667	NA	Intergenic	Intergenic	9940	NR_146469	101929027	Hs.266041	NR_146469	ENSG00000256232	LINC02387	-	long intergenic non-protein coding RNA 2387	ncRNA
14-4	chr14	53446171	53446556	+	0.0666667	NA	Intergenic	MLT1I|LTR|ERVL-MaLR	293009	NR_110062	101927620		NR_110062	ENSG00000258731	LOC101927620	-	uncharacterized LOC101927620	ncRNA
33.1-6	chr6	75148141	75149062	+	0.0666667	NA	intron (NM_080645, intron 6 of 50)	intron (NM_080645, intron 6 of 50)	-19819	NR_145788	109623475		NR_145788		SNORD156	-	small nucleolar RNA, C/D box 156	snoRNA
26.4667-7	chr5	123303068	123303620	+	0.0666667	NA	Intergenic	L1ME4b|LINE|L1	120248	NM_153223	153241	Hs.483209	NM_153223	ENSG00000168944	CEP120	CCDC100|JBTS31|SRTD13	centrosomal protein 120	protein-coding
25.2-5	chr14_KI270724v1_random	109	582	+	0.0666667	NA	NA	BSR/Beta|Satellite|Satellite	NA	NA								
23.0666	chr1	80430661	80431311	+	0.0666667	NA	Intergenic	L1M1|LINE|L1	-104769	NR_125941	101927412	Hs.171273	NR_125940	ENSG00000234184	LINC01781	-	long intergenic non-protein coding RNA 1781	ncRNA
15.3667-2	chr10	49459256	49459558	+	0.0666667	NA	intron (NM_001346440, intron 20 of 20)	intron (NM_001346440, intron 20 of 20)	-63318	NM_001276451	644168	Hs.534530	NM_001080520	ENSG00000165606	DRGX	DRG11|PRRXL1	dorsal root ganglia homeobox	protein-coding
14.9667-11	chr6	169231509	169231839	+	0.0666667	NA	intron (NM_003247, intron 14 of 22)	CpG	18462	NR_134621	101929523	Hs.442696	NR_134621	ENSG00000226445	LOC101929523	-	uncharacterized LOC101929523	ncRNA
11.6-12	chr8	118917516	118917830	+	0.0666667	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	34212	NM_002546	4982	Hs.81791	NM_002546	ENSG00000164761	TNFRSF11B	OCIF|OPG|PDB5|TR1	TNF receptor superfamily member 11b	protein-coding
3.53333	chr2	17073238	17073302	+	0.0666667	NA	Intergenic	MLT1A-int|LTR|ERVL-MaLR	-407436	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding
6.89999	chr1	237443660	237443857	+	0.0666667	NA	intron (NM_001035, intron 13 of 104)	MER58B|DNA|hAT-Charlie	-27361	NR_039626	100616141		NR_039626	ENSG00000266262	MIR4428	-	microRNA 4428	ncRNA
10.4-11	chr6	44255190	44255406	+	0.0666667	NA	exon (NM_001286509, exon 4 of 4)	exon (NM_001286509, exon 4 of 4)	-1013	NR_039790	100616124		NR_039790	ENSG00000284427	MIR4647	mir-4647	microRNA 4647	ncRNA
16.3333-6	chr15	38127440	38127881	+	0.0666667	NA	Intergenic	Intergenic	-54670	NR_147200	107984773	Hs.285193	NR_147199	ENSG00000236914	LINC01852	-	long intergenic non-protein coding RNA 1852	ncRNA
13.6333-4	chr2	47002638	47003006	+	0.0666667	NA	intron (NM_001288951, intron 8 of 20)	intron (NM_001288951, intron 8 of 20)	-60967	NM_001171511	90411	Hs.662152	NM_139279	ENSG00000180398	MCFD2	F5F8D|F5F8D2|LMAN1IP|SDNSF	multiple coagulation factor deficiency 2	protein-coding
20.4	chr1	17317806	17318286	+	0.0666667	NA	intron (NM_012387, intron 1 of 15).2	MER5A|DNA|hAT-Charlie	9849	NM_012387	23569	Hs.522969	NM_012387	ENSG00000159339	PADI4	PAD|PAD4|PADI5|PDI4|PDI5	peptidyl arginine deiminase 4	protein-coding
18.7333-22	chr8	98823713	98824125	+	0.0666667	NA	intron (NM_001256312, intron 3 of 12)	intron (NM_001256312, intron 3 of 12)	1752	NM_001256313	6788	Hs.492333	NM_006281	ENSG00000104375	STK3	KRS1|MST2	serine/threonine kinase 3	protein-coding
18.9333-14	chr7	31057317	31057674	+	0.0666667	NA	intron (NM_001199637, intron 1 of 13)	intron (NM_001199637, intron 1 of 13)	5034	NM_001199635	117	Hs.377783	NM_001118	ENSG00000078549	ADCYAP1R1	PAC1|PAC1R|PACAPR|PACAPRI	ADCYAP receptor type I	protein-coding
24.9667-4	chr13	29834172	29834803	+	0.0666667	NA	intron (NM_007106, intron 1 of 4)	intron (NM_007106, intron 1 of 4)	16130	NM_007106	5412	Hs.145575	NM_007106	ENSG00000122042	UBL3	HCG-1|PNSC1	ubiquitin like 3	protein-coding
17.6	chr11	103943452	103943866	+	0.0666667	NA	intron (NM_025208, intron 4 of 6)	intron (NM_025208, intron 4 of 6)	-92981	NM_001001711	414301	Hs.591941	NM_001001711	ENSG00000170967	DDI1	-	DNA damage inducible 1 homolog 1	protein-coding
16.9-9	chr7	35424327	35424685	+	0.0666667	NA	Intergenic	Intergenic	110651	NR_038864	401324	Hs.377034	NR_038864		LOC401324	-	uncharacterized LOC401324	ncRNA
10.6333-4	chr3	49570273	49570459	+	0.0666667	NA	intron (NM_003458, intron 1 of 11)	intron (NM_003458, intron 1 of 11)	15889	NM_003458	8927	Hs.194684	NM_003458	ENSG00000164061	BSN	ZNF231	bassoon presynaptic cytomatrix protein	protein-coding
24.9333-4	chr3	35512387	35513003	+	0.0666667	NA	Intergenic	Intergenic	-118672	NR_110817	101928135	Hs.550715	NR_110817		LOC101928135	-	uncharacterized LOC101928135	ncRNA
8.3-3	chr20	22897074	22897278	+	0.0666667	NA	Intergenic	Intergenic	-138244	NM_001052	6754	Hs.673846	NM_001052	ENSG00000132671	SSTR4	SS-4-R|SS4-R|SS4R	somatostatin receptor 4	protein-coding
14.9333-14	chr3	20487662	20488105	+	0.0666667	NA	Intergenic	Intergenic	145415	NR_110814	101927829	Hs.639381	NR_110814	ENSG00000231304	LOC101927829	-	uncharacterized LOC101927829	ncRNA
18.2667-3	chr1	209236925	209237385	+	0.0666667	NA	Intergenic	Intergenic	-88301	NR_135085	105372897	Hs.116154	NR_135085	ENSG00000227940	LINC01696	-	long intergenic non-protein coding RNA 1696	ncRNA
12.9667	chr1	57705865	57706129	+	0.0666667	NA	intron (NM_001353980, intron 3 of 5)	intron (NM_001353980, intron 3 of 5)	-154584	NR_104362	101926890	Hs.662207	NR_104362	ENSG00000226759	DAB1-AS1	-	DAB1 antisense RNA 1	ncRNA
17.9333-5	chr2	29289931	29290387	+	0.0666667	NA	intron (NM_004304, intron 9 of 28)	intron (NM_004304, intron 9 of 28)	-66259	NM_001353765	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	ALK receptor tyrosine kinase	protein-coding
9.26666-2	chr8	137470292	137470509	+	0.0666667	NA	Intergenic	MSTB|LTR|ERVL-MaLR	-56812	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
24.1	chr1	82638713	82639410	+	0.0666667	NA	Intergenic	Intergenic	-264122	NR_147074	103283057	Hs.551280	NR_147074	ENSG00000230817	LINC01362	-	long intergenic non-protein coding RNA 1362	ncRNA
17.4667-12	chr8	3612374	3612636	+	0.0666667	NA	intron (NM_033225, intron 8 of 69)	L1M4|LINE|L1	-884054	NR_125426	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA
7.53333-3	chr2	35784696	35784839	+	0.0666667	NA	Intergenic	LTR33|LTR|ERVL	313362	NR_039629	100616475		NR_039629	ENSG00000265301	MIR548AD	-	microRNA 548ad	ncRNA
18.1333-17	chr8	57967010	57967474	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-11116	NR_130934	100505477	Hs.434693	NR_130934	ENSG00000205293	LINC01602	T1560	long intergenic non-protein coding RNA 1602	ncRNA
18.8667-8	chr19	40263455	40263807	+	0.0666667	NA	intron (NM_001243028, intron 1 of 12)	intron (NM_001243028, intron 1 of 12)	1720	NM_001330511	208	Hs.631535	NM_001626	ENSG00000105221	AKT2	HIHGHH|PKBB|PKBBETA|PRKBB|RAC-BETA	AKT serine/threonine kinase 2	protein-coding
15.5667-6	chr19	30007132	30007543	+	0.0666667	NA	intron (NM_001252641, intron 6 of 10)	intron (NM_001252641, intron 6 of 10)	65098	NM_003796	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	URI1 prefoldin like chaperone	protein-coding
17.8-9	chr14	82765926	82766453	+	0.0666667	NA	Intergenic	Intergenic	123557	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
13.6333-9	chr3	163785916	163786283	+	0.0666667	NA	Intergenic	L1PB1|LINE|L1	385457	NR_031665	100302148		NR_031665	ENSG00000221251	MIR1263	MIRN1263|hsa-mir-1263	microRNA 1263	ncRNA
10.9-10	chrX	152953351	152953624	+	0.0666667	NA	intron (NM_007150, intron 16 of 22)	AluJo|SINE|Alu	11816	NM_001178115	7739	Hs.16622	NM_007150	ENSG00000147394	ZNF185	SCELL	zinc finger protein 185 with LIM domain	protein-coding
13.2333-4	chr17	61901858	61902203	+	0.0666667	NA	intron (NM_001351695, intron 9 of 24)	HAL1|LINE|L1	25952	NM_020748	57508	Hs.279646	NM_020748	ENSG00000108506	INTS2	INT2|KIAA1287	integrator complex subunit 2	protein-coding
10.4333-4	chr8	140876666	140876877	+	0.0666667	NA	intron (NM_001352737, intron 3 of 32)	L1ME3F|LINE|L1	124233	NM_001352710	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding
18.6-6	chr12	121293721	121294213	+	0.0666667	NA	intron (NM_172215, intron 1 of 15)	AluSq10|SINE|Alu	2742	NM_001270485	10645	Hs.297343	NM_006549	ENSG00000110931	CAMKK2	CAMKK|CAMKKB	calcium/calmodulin dependent protein kinase kinase 2	protein-coding
25.5333-11	chr6	71220983	71221650	+	0.0666667	NA	Intergenic	L1MC5a|LINE|L1	-67495	NM_024576	79627	Hs.648434	NM_024576	ENSG00000119900	OGFRL1	dJ331H24.1	opioid growth factor receptor like 1	protein-coding
10.7	chr1	28432091	28432298	+	0.0666667	NA	intron (NM_001350160, intron 3 of 14)	AluSg|SINE|Alu	-5956	NM_023923	65979	Hs.225641	NM_023923	ENSG00000204138	PHACTR4	PPP1R124	phosphatase and actin regulator 4	protein-coding
23.9333-5	chr14	49581870	49582349	+	0.0666667	NA	intron (NM_001030001, intron 2 of 2)	L2|LINE|L2	4271	NM_001030001	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29|uS14	ribosomal protein S29	protein-coding
20.2666	chr1	22876079	22876679	+	0.0666667	NA	intron (NM_004442, intron 5 of 15)	intron (NM_004442, intron 5 of 15)	-13153	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA
23.4333-9	chr4	107199860	107200478	+	0.0666667	NA	Intergenic	Intergenic	-163856	NM_014421	27123	Hs.211869	NM_014421	ENSG00000155011	DKK2	DKK-2	dickkopf WNT signaling pathway inhibitor 2	protein-coding
31.0333-4	chr2	210037680	210038271	+	0.0666667	NA	intron (NR_110291, intron 4 of 4)	intron (NR_110291, intron 4 of 4)	8053	NR_110291	101928020	Hs.635556	NR_110291		LOC101928020	-	uncharacterized LOC101928020	ncRNA
18.5	chr1	50436841	50437364	+	0.0666667	NA	TTS (NM_007051)	TTS (NM_007051)	-13659	NM_032110	63950	Hs.334481	NM_032110	ENSG00000142700	DMRTA2	-	DMRT like family A2	protein-coding
17.3333-10	chr7	7698738	7699227	+	0.0666667	NA	intron (NM_002947, intron 2 of 7)	AluJr|SINE|Alu	19625	NM_002947	6119	Hs.487540	NM_002947	ENSG00000106399	RPA3	REPA3|RP-A p14	replication protein A3	protein-coding
9.5-2	chr16	73003605	73003803	+	0.0666667	NA	intron (NM_006885, intron 1 of 9)	AluSx1|SINE|Alu	44424	NM_006885	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding
15.9	chr1	4724099	4724337	+	0.0666667	NA	intron (NM_018836, intron 2 of 5)	intron (NM_018836, intron 2 of 5)	69609	NM_001042478	55966	Hs.12473	NM_018836	ENSG00000196581	AJAP1	MOT8|SHREW-1|SHREW1	adherens junctions associated protein 1	protein-coding
24.1333-2	chr1	227873022	227873672	+	0.0666667	NA	Intergenic	L1PA7|LINE|L1	57630	NM_183062	339501	Hs.97604	NM_183062	ENSG00000185888	PRSS38	MPN2	serine protease 38	protein-coding
18.2-6	chr14	63274959	63275454	+	0.0666667	NA	intron (NM_020663, intron 2 of 4)	AluJr|SINE|Alu	43729	NM_145171	122876	Hs.375028	NM_145171	ENSG00000179600	GPHB5	B5|GPB5|ZLUT1	glycoprotein hormone subunit beta 5	protein-coding
7.63334	chr15	50367034	50367148	+	0.0666667	NA	Intergenic	Intergenic	6762	NR_039862	100616396		NR_039862	ENSG00000284284	MIR4712	-	microRNA 4712	ncRNA
14.6-14	chr7	3719471	3719866	+	0.0666667	NA	intron (NM_152744, intron 4 of 44)	L1MD2|LINE|L1	-410017	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
19.3333	chr10	90350703	90351167	+	0.0666667	NA	Intergenic	L2c|LINE|L2	189870	NR_110657	101926942	Hs.382666	NR_110657	ENSG00000236373	LINC02653	-	long intergenic non-protein coding RNA 2653	ncRNA
23-4	chr14	71750972	71751569	+	0.0666667	NA	Intergenic	L3|LINE|CR1	164972	NM_001284246	26037	Hs.654657	NM_015556	ENSG00000197555	SIPA1L1	E6TP1|SPAR1	signal induced proliferation associated 1 like 1	protein-coding
21.3-11	chr2	138606016	138606336	+	0.0666667	NA	Intergenic	Intergenic	104406	NM_001001664	339745	Hs.333297	NM_001001664	ENSG00000144228	SPOPL	BTBD33	speckle type BTB/POZ protein like	protein-coding
16.5333-7	chr3	66176714	66177039	+	0.0666667	NA	intron (NM_173471, intron 1 of 10)	intron (NM_173471, intron 1 of 10)	43266	NM_173471	115286	Hs.379386	NM_173471	ENSG00000144741	SLC25A26	COXPD28|SAMC	solute carrier family 25 member 26	protein-coding
22.9333-5	chr10	113394986	113395381	+	0.0666667	NA	Intergenic	THE1B|LTR|ERVL-MaLR	-155648	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding
21.1333-3	chr1	190163219	190163849	+	0.0666667	NA	intron (NM_199051, intron 6 of 7)	intron (NM_199051, intron 6 of 7)	312476	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
15.5667-7	chr21	14922079	14922420	+	0.0666667	NA	Intergenic	L1ME2|LINE|L1	-3581	NR_146322	107987295		NR_146322		LINC02246	-	long intergenic non-protein coding RNA 2246	ncRNA
14.8-4	chr12	10067347	10067647	+	0.0666667	NA	Intergenic	Intergenic	31488	NM_016511	51267	Hs.29549	NM_016511	ENSG00000150048	CLEC1A	CLEC-1|CLEC1	C-type lectin domain family 1 member A	protein-coding
29.7-2	chr10	8346953	8347580	+	0.0666667	NA	Intergenic	Intergenic	-78961	NR_108058	100507143	Hs.258979	NR_108058	ENSG00000232170	LINC00708	GS1-756B1.2	long intergenic non-protein coding RNA 708	ncRNA
23.7-6	chr2	47368096	47368559	+	0.0666667	NA	promoter-TSS (NM_002354)	promoter-TSS (NM_002354)	-821	NM_002354	4072	Hs.542050	NM_002354	ENSG00000119888	EPCAM	DIAR5|EGP-2|EGP314|EGP40|ESA|HNPCC8|KS1/4|KSA|M4S1|MIC18|MK-1|TACSTD1|TROP1	epithelial cell adhesion molecule	protein-coding
23.5-12	chr2	125363612	125364097	+	0.0666667	NA	Intergenic	Intergenic	754131	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
17.2667-9	chr15	89228935	89229372	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-7574	NM_000326	6017	Hs.1933	NM_000326	ENSG00000140522	RLBP1	CRALBP	retinaldehyde binding protein 1	protein-coding
8.9	chr12	62121791	62121993	+	0.0666667	NA	intron (NM_178539, intron 1 of 4)	intron (NM_178539, intron 1 of 4)	70947	NM_178539	338811	Hs.269745	NM_178539	ENSG00000198673	TAFA2	FAM19A2|TAFA-2	TAFA chemokine like family member 2	protein-coding
20.1667-10	chr3	83024435	83024994	+	0.0666667	NA	Intergenic	Intergenic	1038572	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
18.1-13	chr7	3616705	3617097	+	0.0666667	NA	intron (NM_152744, intron 1 of 44)	intron (NM_152744, intron 1 of 44)	315649	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
12.8667-7	chr4	148135011	148135394	+	0.0666667	NA	intron (NR_148974, intron 4 of 6)	MLT1A1|LTR|ERVL-MaLR	307212	NM_001166104	4306	Hs.163924	NM_000901	ENSG00000151623	NR3C2	MCR|MLR|MR|NR3C2VIT	nuclear receptor subfamily 3 group C member 2	protein-coding
18.3667-7	chr21	28189693	28190061	+	0.0666667	NA	intron (NR_126012, intron 3 of 5)	L1MA1|LINE|L1	38790	NR_126012	101927973	Hs.570414	NR_126012	ENSG00000236532	LINC01695	-	long intergenic non-protein coding RNA 1695	ncRNA
12.2667-4	chr5	99764467	99764651	+	0.0666667	NA	Intergenic	Intergenic	230569	NR_110562	102724855	Hs.519477	NR_110562		LINC02113	CTD-2151A2.1	long intergenic non-protein coding RNA 2113	ncRNA
15.7-4	chr14	86181773	86182008	+	0.0666667	NA	Intergenic	Intergenic	247212	NR_110155	101928767	Hs.536380	NR_110155		LINC02328	-	long intergenic non-protein coding RNA 2328	ncRNA
23.2667-7	chr5	22921120	22921678	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-68055	NM_001364104	1010	Hs.113684	NM_004061	ENSG00000154162	CDH12	CDHB	cadherin 12	protein-coding
21.9-8	chr4	62230756	62231239	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-69232	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
14.9333-13	chr22	19435466	19435846	+	0.0666667	NA	exon (NM_003776, exon 4 of 4)	exon (NM_003776, exon 4 of 4)	2717	NM_001318152	64976	Hs.431307	NM_003776	ENSG00000185608	MRPL40	L40mt|MRP-L22|MRP-L40|MRPL22|NLVCF|URIM	mitochondrial ribosomal protein L40	protein-coding
29.5333-8	chr9	111964337	111964858	+	0.0666667	NA	Intergenic	AluSq2|SINE|Alu	32497	NR_039814	100616114		NR_039814	ENSG00000266315	MIR4668	mir-4668	microRNA 4668	ncRNA
10.7667-8	chr5	111847147	111847346	+	0.0666667	NA	intron (NM_001142474, intron 2 of 3)	MLT1A|LTR|ERVL-MaLR	-65262	NR_046678	100873948	Hs.147716	NR_046678	ENSG00000250095	NREP-AS1	-	NREP antisense RNA 1	ncRNA
16.8667-8	chr20	40899930	40900329	+	0.0666667	NA	Intergenic	Intergenic	-80584	NR_145524	100128988	Hs.636443	NR_145524		LOC100128988	-	uncharacterized LOC100128988	ncRNA
20.8	chr1	63390457	63390867	+	0.0666667	NA	intron (NM_013339, intron 2 of 14)	L1MA3|LINE|L1	23035	NM_013339	29929	Hs.258501	NM_013339	ENSG00000088035	ALG6	CDG1C	ALG6 alpha-1,3-glucosyltransferase	protein-coding
5.03334	chr5	82100569	82100644	+	0.0666667	NA	intron (NM_031482, intron 3 of 7)	L3b|LINE|CR1	128583	NM_031482	83734	Hs.713698	NM_031482	ENSG00000152348	ATG10	APG10|APG10L|pp12616	autophagy related 10	protein-coding
8.56667	chr14	52019113	52019286	+	0.0666667	NA	exon (NM_007361, exon 14 of 22)	exon (NM_007361, exon 14 of 22)	29653	NM_016039	51637	Hs.534457	NM_016039	ENSG00000087302	RTRAF	C14orf166|CGI-99|CGI99|CLE|CLE7|LCRP369|RLLM1|hCLE|hCLE1	RNA transcription, translation and transport factor	protein-coding
25.8666-8	chr9	31149089	31149827	+	0.0666667	NA	Intergenic	Intergenic	232032	NR_135134	101929620	Hs.547175	NR_135134	ENSG00000260720	LINC01243	-	long intergenic non-protein coding RNA 1243	ncRNA
15.7667-4	chr14	68736375	68736741	+	0.0666667	NA	Intergenic	Intergenic	57356	NM_001244698	677	Hs.85155	NM_004926	ENSG00000185650	ZFP36L1	BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1	ZFP36 ring finger protein like 1	protein-coding
13.5333-4	chr11	110982645	110983047	+	0.0666667	NA	Intergenic	Intergenic	114472	NR_149131	105369490		NR_149131	ENSG00000271584	LINC02550	-	long intergenic non-protein coding RNA 2550	ncRNA
26.8667-8	chr3	8497801	8498428	+	0.0666667	NA	intron (NR_033378, intron 2 of 3)	L2a|LINE|L2	3544	NR_033378	100288428	Hs.651576	NR_033378	ENSG00000227110	LMCD1-AS1	-	LMCD1 antisense RNA 1	ncRNA
15.8333-9	chr20	50733511	50733919	+	0.0666667	NA	intron (NM_032521, intron 1 of 2)	intron (NM_032521, intron 1 of 2)	2135	NM_032521	84612	Hs.589848	NM_032521	ENSG00000124171	PARD6B	PAR6B	par-6 family cell polarity regulator beta	protein-coding
20.3667-3	chr15	85702311	85702712	+	0.0666667	NA	intron (NM_007200, intron 17 of 36)	intron (NM_007200, intron 17 of 36)	56214	NR_120366	101929679	Hs.513112	NR_120366		LOC101929679	-	uncharacterized LOC101929679	ncRNA
17.2667-7	chr14	74355827	74356230	+	0.0666667	NA	intron (NM_018228, intron 1 of 1)	AluJo|SINE|Alu	7557	NM_018228	55237	Hs.578167	NM_018228	ENSG00000133980	VRTN	C14orf115|vertnin	vertebrae development associated	protein-coding
12.9667-9	chr5	89609056	89609441	+	0.0666667	NA	Intergenic	Intergenic	407472	NR_037433	100500825		NR_037433	ENSG00000264342	MIR3660	mir-3660	microRNA 3660	ncRNA
21.1-9	chr4	96482073	96482595	+	0.0666667	NA	intron (NR_147149, intron 2 of 3)	L1MA3|LINE|L1	171631	NR_147149	105377338		NR_147149		LINC02267	-	long intergenic non-protein coding RNA 2267	ncRNA
22.4667-8	chr3	184362775	184363238	+	0.0666667	NA	promoter-TSS (NM_001278714)	promoter-TSS (NM_001278714)	23	NM_001278714	5437	Hs.432574	NM_006232	ENSG00000163882	POLR2H	RPABC3|RPB17|RPB8	RNA polymerase II subunit H	protein-coding
10.3-8	chr6	122908928	122909200	+	0.0666667	NA	Intergenic	L1M5|LINE|L1	-87171	NM_001010852	134829	Hs.486361	NM_001010852	ENSG00000146352	CLVS2	C6orf212|C6orf213|RLBP1L2|bA160A10.4	clavesin 2	protein-coding
18.1667-7	chr22	21893613	21894134	+	0.0666667	NA	Intergenic	AluSx3|SINE|Alu	-26193	NM_138957	5594	Hs.431850	NM_002745	ENSG00000100030	MAPK1	ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK	mitogen-activated protein kinase 1	protein-coding
10.0333-4	chr2	190031330	190031482	+	0.0666667	NA	Intergenic	Intergenic	31323	NM_005259	2660	Hs.41565	NM_005259	ENSG00000138379	MSTN	GDF8|MSLHP	myostatin	protein-coding
14.5-4	chr14	63054240	63054589	+	0.0666667	NA	Intergenic	L1MA8|LINE|L1	-8956	NM_139318	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding
9.33333-2	chr9	17496048	17496261	+	0.0666667	NA	intron (NM_001365029, intron 25 of 25)	intron (NM_001365029, intron 25 of 25)	-82912	NM_003026	6456	Hs.75149	NM_003026	ENSG00000107295	SH3GL2	CNSA2|EEN-B1|SH3D2A|SH3P4	SH3 domain containing GRB2 like 2, endophilin A1	protein-coding
11.4667-5	chr3	149596219	149596523	+	0.0666667	NA	intron (NM_001348362, intron 5 of 9)	intron (NM_001348362, intron 5 of 9)	61654	NM_001168280	25937	Hs.477921	NM_015472	ENSG00000018408	WWTR1	TAZ	WW domain containing transcription regulator 1	protein-coding
33.0333-3	chr1	153494923	153495853	+	0.0666667	NA	Intergenic	Intergenic	-34737	NM_002963	6278	Hs.112408	NM_002963	ENSG00000143556	S100A7	PSOR1|S100A7c	S100 calcium binding protein A7	protein-coding
16	chr1	226161378	226161711	+	0.0666667	NA	exon (NM_022735, exon 4 of 8)	exon (NM_022735, exon 4 of 8)	13541	NR_146443	107985353	Hs.735455	NR_146443	ENSG00000234478	ACBD3-AS1	-	ACBD3 antisense RNA 1	ncRNA
19.9-4	chr11	61190161	61190584	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-13143	NM_001079807	643834	Hs.601055	NM_001079807	ENSG00000229859	PGA3	-	pepsinogen 3, group I (pepsinogen A)	protein-coding
31.4-17	chr5	77681709	77682329	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-43322	NM_032109	23440	Hs.202247	NM_032109	ENSG00000171540	OTP	-	orthopedia homeobox	protein-coding
23.2667-8	chr5	135980816	135981379	+	0.0666667	NA	Intergenic	L1M5|LINE|L1	-26114	NM_002302	3950	Hs.512580	NM_002302	ENSG00000145826	LECT2	chm-II|chm2	leukocyte cell derived chemotaxin 2	protein-coding
8.86666-5	chr8	249558	249781	+	0.0666667	NA	Intergenic	MER66-int|LTR|ERV1	17213	NM_001287254	169270	Hs.591388	NM_173539	ENSG00000172748	ZNF596	-	zinc finger protein 596	protein-coding
8.93333	chr12	12931016	12931203	+	0.0666667	NA	intron (NR_149067, intron 1 of 2)	MLT1I|LTR|ERVL-MaLR	3383	NR_149067	100506314	Hs.127718	NR_038920	ENSG00000247498	GPRC5D-AS1	-	GPRC5D and HEBP1 antisense RNA 1	ncRNA
16.7-14	chr4	30930103	30930532	+	0.0666667	NA	intron (NM_001173523, intron 2 of 2)	intron (NM_001173523, intron 2 of 2)	209948	NM_032456	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
25.9-12	chr7	123102286	123102839	+	0.0666667	NA	Intergenic	L1MEc|LINE|L1	97407	NM_022444	6561	Hs.489849	NM_022444	ENSG00000081800	SLC13A1	NAS1|NaSi-1	solute carrier family 13 member 1	protein-coding
41.6667-2	chr17	43215281	43216122	+	0.0666667	NA	intron (NM_145041, intron 4 of 8)	intron (NM_145041, intron 4 of 8)	3826	NM_145041	113277	Hs.536474	NM_145041	ENSG00000184988	TMEM106A	-	transmembrane protein 106A	protein-coding
11.0667-3	chr20	41963391	41963653	+	0.0666667	NA	Intergenic	Intergenic	-345145	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding
19.1667-4	chr12	60585090	60585558	+	0.0666667	NA	Intergenic	MER61D|LTR|ERV1	895954	NR_073056	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
18.8-12	chr8	83914632	83915145	+	0.0666667	NA	Intergenic	LOR1-int|LTR|ERV1	-267899	NM_001354325	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
20.3667-5	chr2	145884162	145884557	+	0.0666667	NA	Intergenic	MER3|DNA|hAT-Charlie	-702698	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
15.8-15	chrX	13382977	13383300	+	0.0666667	NA	Intergenic	LTR49|LTR|ERV1	47897	NR_045260	100133123	Hs.449499	NR_045260	ENSG00000226985	LINC01203	-	long intergenic non-protein coding RNA 1203	ncRNA
18.6333-17	chr5	82874005	82874499	+	0.0666667	NA	Intergenic	Intergenic	-14416	NR_105016	102546175		NR_105016	ENSG00000281327	LINC01338	-	long intergenic non-protein coding RNA 1338	ncRNA
14.2667-6	chr2	158585939	158586280	+	0.0666667	NA	intron (NM_001005476, intron 3 of 20)	L1MB7|LINE|L1	129157	NM_001304970	8502	Hs.407580	NM_003628	ENSG00000144283	PKP4	p0071	plakophilin 4	protein-coding
15.0667-11	chr3	178084659	178085021	+	0.0666667	NA	Intergenic	Intergenic	267975	NR_110826	102724550	Hs.570526	NR_110826	ENSG00000231574	LINC02015	KCCAT211	long intergenic non-protein coding RNA 2015	ncRNA
22.7666-3	chr12	29440748	29441394	+	0.0666667	NA	intron (NM_001353179, intron 25 of 25)	MIRc|SINE|MIR	51777	NR_073171	101055625	Hs.569158	NR_073170	ENSG00000257599	OVCH1-AS1	-	OVCH1 antisense RNA 1	ncRNA
9.46667-2	chr3	194265783	194265959	+	0.0666667	NA	Intergenic	Intergenic	-15718	NR_125403	100505920	Hs.436654	NR_125403	ENSG00000225742	LINC02036	-	long intergenic non-protein coding RNA 2036	ncRNA
30.3667-11	chr8	123737176	123737765	+	0.0666667	NA	promoter-TSS (NM_004306)	promoter-TSS (NM_004306)	-77	NM_004306	312	Hs.181107	NM_004306	ENSG00000104537	ANXA13	ANX13|ISA	annexin A13	protein-coding
11.3667-8	chr7	84484620	84484869	+	0.0666667	NA	Intergenic	Intergenic	-47732	NR_110080	101927378	Hs.539042	NR_110079	ENSG00000235139	LOC101927378	-	uncharacterized LOC101927378	ncRNA
12.8	chr1	48108457	48108760	+	0.0666667	NA	intron (NR_026749, intron 9 of 9)	AluSq2|SINE|Alu	73820	NR_026749	391037	Hs.585393	NR_026749		SKINT1L	BTN12|SKINT1|SKINTL|SKINTP	Skint1 like (pseudogene)	pseudo
15.2667-8	chr19	35041763	35042119	+	0.0666667	NA	5' UTR (NM_182983, exon 2 of 13)	5' UTR (NM_182983, exon 2 of 13)	1435	NM_182983	3249	Hs.182385	NM_002151	ENSG00000105707	HPN	TMPRSS1	hepsin	protein-coding
11.7667-3	chr12	122285987	122286277	+	0.0666667	NA	intron (NM_198240, intron 19 of 23)	intron (NM_198240, intron 19 of 23)	-19638	NM_001351021	65082	Hs.487883	NM_022916	ENSG00000139719	VPS33A	MPSPS	VPS33A core subunit of CORVET and HOPS complexes	protein-coding
17.7667-6	chr19	10546908	10547178	+	0.0666667	NA	non-coding (NR_104024, exon 4 of 10)	non-coding (NR_104024, exon 4 of 10)	3139	NR_104025	84971	Hs.512799	NM_032885	ENSG00000130734	ATG4D	APG4-D|APG4D|AUTL4	autophagy related 4D cysteine peptidase	protein-coding
18.2667-2	chr1	206906046	206906508	+	0.0666667	NA	intron (NM_005449, intron 7 of 7)	intron (NM_005449, intron 7 of 7)	8834	NM_001185158	11009	Hs.58831	NM_006850	ENSG00000162892	IL24	C49A|FISP|IL10B|MDA7|MOB5|ST16	interleukin 24	protein-coding
13.1333-9	chr5	127712106	127712482	+	0.0666667	NA	intron (NM_001317938, intron 2 of 6)	MSTB1|LTR|ERVL-MaLR	8905	NM_001317938	728586	Hs.582532	NM_001317938	ENSG00000230561	CCDC192	LINC01183	coiled-coil domain containing 192	protein-coding
17.8-17	chr6	54077870	54078278	+	0.0666667	NA	intron (NM_001281746, intron 1 of 11)	intron (NM_001281746, intron 1 of 11)	-30480	NR_046710	100873951		NR_046710		MLIP-AS1	-	MLIP antisense RNA 1	ncRNA
9.43333	chr15	64754584	64754827	+	0.0666667	NA	intron (NR_138350, intron 1 of 7)	AluSq|SINE|Alu	6512	NR_138364	348093	Hs.436518	NM_194272	ENSG00000166831	RBPMS2	-	RNA binding protein, mRNA processing factor 2	protein-coding
19.7-8	chr3	89650973	89651517	+	0.0666667	NA	Intergenic	Intergenic	543624	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
21.2-6	chr13	82456490	82457083	+	0.0666667	NA	Intergenic	Tigger2a|DNA|TcMar-Tigger	-1229803	NR_047494	100861546	Hs.539621	NR_047494	ENSG00000260094	LINC00564	-	long intergenic non-protein coding RNA 564	ncRNA
25.1-7	chr2	64507647	64508256	+	0.0666667	NA	Intergenic	L1ME3Cz|LINE|L1	16204	NR_136167	101927402	Hs.187018	NR_136167	ENSG00000260101	LOC101927402	-	uncharacterized LOC101927402	ncRNA
3.16667	chr2	36872950	36872997	+	0.0666667	NA	intron (NM_003162, intron 10 of 17)	L1MEg|LINE|L1	93563	NM_003162	6801	Hs.127486	NM_003162	ENSG00000115808	STRN	PPP2R6A|SG2NA|STRN1	striatin	protein-coding
8.16666-3	chr18	6547199	6547392	+	0.0666667	NA	intron (NR_120518, intron 2 of 5)	L1MC5|LINE|L1	35879	NR_120518	100130480	Hs.646267	NM_001243517	ENSG00000265944	LINC01387	C18orf64	long intergenic non-protein coding RNA 1387	ncRNA
18.5333-5	chr12	111347833	111348367	+	0.0666667	NA	exon (NM_001370598, exon 22 of 22)	exon (NM_001370598, exon 22 of 22)	20995	NM_001177997	144717	Hs.173088	NM_144671	ENSG00000198324	PHETA1	FAM109A|IPIP27A|SES1	PH domain containing endocytic trafficking adaptor 1	protein-coding
14.9-10	chr3	194892447	194892823	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-123926	NR_146990	105374293		NR_146990	ENSG00000230401	LINC01972	-	long intergenic non-protein coding RNA 1972	ncRNA
5.76667-2	chr2	38408500	38408586	+	0.0666667	NA	Intergenic	Intergenic	-22751	NR_146454	100996902	Hs.128280	NR_146454	ENSG00000235009	LINC01883	-	long intergenic non-protein coding RNA 1883	ncRNA
14.8667	chr1	10710836	10711197	+	0.0666667	NA	intron (NM_001079843, intron 2 of 20)	AluSx|SINE|Alu	85630	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding
15.6667-4	chr2	139004667	139004979	+	0.0666667	NA	Intergenic	Intergenic	107499	NR_033658	647012	Hs.639411	NR_033658		YY1P2	-	YY1 transcription factor pseudogene 2	pseudo
18.3333-5	chr12	2796951	2797464	+	0.0666667	NA	exon (NM_002014, exon 2 of 10)	exon (NM_002014, exon 2 of 10)	2237	NM_002014	2288	Hs.524183	NM_002014	ENSG00000004478	FKBP4	FKBP51|FKBP52|FKBP59|HBI|Hsp56|PPIase|p52	FKBP prolyl isomerase 4	protein-coding
17-3	chr20	7950189	7950653	+	0.0666667	NA	Intergenic	Intergenic	-9963	NM_017545	54363	Hs.193640	NM_017545	ENSG00000101323	HAO1	GOX|GOX1|HAOX1	hydroxyacid oxidase 1	protein-coding
30.3667	chr1	67087366	67087991	+	0.0666667	NA	Intergenic	LTR17|LTR|ERV1	-33530	NM_015139	23169	Hs.213642	NM_015139	ENSG00000116704	SLC35D1	SHNKND|UGTREL7	solute carrier family 35 member D1	protein-coding
24.6667-2	chr10	112124742	112125277	+	0.0666667	NA	Intergenic	Intergenic	58756	NM_020918	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
13.0333-2	chr15	95513289	95513575	+	0.0666667	NA	Intergenic	Intergenic	80339	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA
16.7333-4	chr12	74322380	74322826	+	0.0666667	NA	Intergenic	Intergenic	-29972	NR_038300	100507377	Hs.455715	NR_038300	ENSG00000251138	LOC100507377	-	uncharacterized LOC100507377	ncRNA
27.4-17	chr8	79573870	79574496	+	0.0666667	NA	Intergenic	Intergenic	-36934	NM_001199214	11075	Hs.521651	NM_007029	ENSG00000104435	STMN2	SCG10|SCGN10	stathmin 2	protein-coding
4.83334	chr17	2601237	2601310	+	0.0666667	NA	intron (NM_000430, intron 1 of 10)	AluSq4|SINE|Alu	7619	NM_000430	5048	Hs.77318	NM_000430	ENSG00000007168	PAFAH1B1	LIS1|LIS2|MDCR|MDS|NudF|PAFAH	platelet activating factor acetylhydrolase 1b regulatory subunit 1	protein-coding
20.9-17	chr5	37168264	37168766	+	0.0666667	NA	intron (NM_023073, intron 34 of 51)	FLAM_C|SINE|Alu	-80531	NR_134263	105374727	Hs.170993	NR_134263	ENSG00000286193	LOC105374727	-	uncharacterized LOC105374727	ncRNA
8.06666-3	chr8	50665260	50665463	+	0.0666667	NA	intron (NR_135797, intron 17 of 20)	L1MC4|LINE|L1	501230	NM_001321778	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
18-18	chr6	148440639	148441112	+	0.0666667	NA	intron (NM_001346505, intron 4 of 19)	intron (NM_001346505, intron 4 of 19)	-67624	NM_001346508	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	CAPOK|DUH1|SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding
13.7333-4	chr21	19379415	19379676	+	0.0666667	NA	Intergenic	Intergenic	520210	NR_146910	105372746	Hs.580899	NR_146910	ENSG00000233480	LINC01683	C21orf40	long intergenic non-protein coding RNA 1683	ncRNA
16.3333-2	chr12	77563756	77564095	+	0.0666667	NA	Intergenic	Intergenic	-266969	NM_014903	89795	Hs.655301	NM_014903	ENSG00000067798	NAV3	POMFIL1|STEERIN3|unc53H3	neuron navigator 3	protein-coding
17.4-8	chr2	116811017	116811405	+	0.0666667	NA	Intergenic	Intergenic	-1003480	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
15.4-4	chr1	119007984	119008304	+	0.0666667	NA	Intergenic	CpG	-6739	NR_135035	105378933	Hs.599652	NR_135034	ENSG00000226172	LOC105378933	-	uncharacterized LOC105378933	ncRNA
14.6333-9	chr21	30939349	30939713	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-57951	NM_175858	337880	Hs.407654	NM_175858	ENSG00000182591	KRTAP11-1	HACL-1|HACL1|KAP11.1	keratin associated protein 11-1	protein-coding
7.76667-3	chr2	219371043	219371209	+	0.0666667	NA	TTS (NR_134970)	TTS (NR_134970)	16236	NM_001319118	23549	Hs.258551	NM_012100	ENSG00000123992	DNPEP	ASPEP|DAP	aspartyl aminopeptidase	protein-coding
9.53333	chr10	103336006	103336235	+	0.0666667	NA	intron (NM_032154, intron 3 of 6)	AluSx|SINE|Alu	15020	NM_001011663	84108	Hs.335808	NM_032154	ENSG00000156374	PCGF6	MBLR|RNF134	polycomb group ring finger 6	protein-coding
16.8-2	chr19	50245711	50245964	+	0.0666667	NA	intron (NM_024729, intron 10 of 40)	L1ME4a|LINE|L1	42209	NM_024729	79784	Hs.467142	NM_024729	ENSG00000105357	MYH14	DFNA4|DFNA4A|FP17425|MHC16|MYH17|NMHC II-C|NMHC-II-C|PNMHH|myosin	myosin heavy chain 14	protein-coding
15.7333-3	chr10	37731776	37732066	+	0.0666667	NA	Intergenic	HERV35I-int|LTR|ERV1	63254	NR_051997	100419868	Hs.741719	NR_051997		ZNF33BP1	-	zinc finger protein 33B pseudogene 1	pseudo
14.9-3	chr10	127303631	127304009	+	0.0666667	NA	intron (NM_001290223, intron 29 of 51)	AluJb|SINE|Alu	-107229	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	INSYN2A	C10orf141|FAM196A|INSYN2	inhibitory synaptic factor 2A	protein-coding
24.3-19	chr8	137597054	137597658	+	0.0666667	NA	Intergenic	L1MC5|LINE|L1	-183768	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
5.46666	chr7	131884151	131884291	+	0.0666667	NA	Intergenic	Intergenic	-25999	NR_110836	101928782	Hs.571369	NR_110836	ENSG00000224865	LOC101928782	-	uncharacterized LOC101928782	ncRNA
15.8-4	chr14	38071104	38071563	+	0.0666667	NA	Intergenic	Intergenic	-136571	NM_001049	6751	Hs.248160	NM_001049	ENSG00000139874	SSTR1	SRIF-2|SS-1-R|SS1-R|SS1R	somatostatin receptor 1	protein-coding
9.73333-3	chr8	138720724	138720961	+	0.0666667	NA	intron (NM_152888, intron 26 of 64)	intron (NM_152888, intron 26 of 64)	193199	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
21.6333-11	chr9	133293175	133293724	+	0.0666667	NA	Intergenic	HUERS-P1-int|LTR|ERV1	-18248	NM_020469	28	Hs.654423	NM_020469	ENSG00000175164	ABO	A3GALNT|A3GALT1|GTB|NAGAT	ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase	protein-coding
20.3-15	chr5	158852502	158852869	+	0.0666667	NA	intron (NM_182708, intron 5 of 14)	intron (NM_182708, intron 5 of 14)	245271	NM_001364158	1879	Hs.573143	NM_024007	ENSG00000164330	EBF1	COE1|EBF|O/E-1|OLF1	EBF transcription factor 1	protein-coding
7.06666	chr11	83161636	83161810	+	0.0666667	NA	intron (NM_001346413, intron 2 of 15)	intron (NM_001346413, intron 2 of 15)	4592	NM_015885	51585	Hs.128959	NM_015885	ENSG00000165494	PCF11	-	PCF11 cleavage and polyadenylation factor subunit	protein-coding
8.03333-7	chr8	85179486	85179701	+	0.0666667	NA	intron (NM_001083588, intron 1 of 7)	(AT)n|Simple_repeat|Simple_repeat	2439	NM_001083588	1875	Hs.445758	NM_001951	ENSG00000133740	E2F5	E2F-5	E2F transcription factor 5	protein-coding
15.1-7	chr2	25774409	25774635	+	0.0666667	NA	intron (NM_001369346, intron 3 of 10)	L1ME3|LINE|L1	20169	NM_001369347	55252	Hs.119815	NM_018263	ENSG00000143970	ASXL2	ASXH2|SHAPNS	ASXL transcriptional regulator 2	protein-coding
22.5333-4	chr11	81300899	81301387	+	0.0666667	NA	Intergenic	Intergenic	-538340	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
15.8333-13	chr5	146624434	146624715	+	0.0666667	NA	intron (NM_181678, intron 8 of 10)	L2a|LINE|L2	-108461	NM_194251	134391	Hs.483732	NM_194251	ENSG00000173250	GPR151	GALR4|GALRL|GPCR|GPCR-2037|PGR7	G protein-coupled receptor 151	protein-coding
11-7	chr3	120100537	120100757	+	0.0666667	NA	Intergenic	Intergenic	-6200	NM_001354596	2932	Hs.445733	NM_002093	ENSG00000082701	GSK3B	-	glycogen synthase kinase 3 beta	protein-coding
22.9333-8	chr2	16268818	16269355	+	0.0666667	NA	Intergenic	MER21B|LTR|ERVL	218659	NR_126559	104797537	Hs.435748	NR_126559	ENSG00000236289	GACAT3	LINC01458|lncRNA-AC130710	gastric cancer associated transcript 3	ncRNA
6.93333-4	chr5	2724857	2725010	+	0.0666667	NA	Intergenic	Intergenic	12342	NR_145480	101234261		NR_145480	ENSG00000281560	LSINCT5	-	long stress-induced non-coding transcript 5	ncRNA
22.7667-13	chr4	180025520	180025894	+	0.0666667	NA	Intergenic	L1MD2|LINE|L1	1133442	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
14.3333-6	chr2	52804481	52804812	+	0.0666667	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	-102031	NR_039630	100616431		NR_039630	ENSG00000264975	MIR4431	-	microRNA 4431	ncRNA
26.4667-9	chr6	115941888	115942386	+	0.0666667	NA	3' UTR (NM_002031, exon 8 of 8)	3' UTR (NM_002031, exon 8 of 8)	-96594	NR_027338	728402	Hs.729953	NR_027338		TPI1P3	-	triosephosphate isomerase 1 pseudogene 3	pseudo
16.5333-10	chr7	11062888	11063291	+	0.0666667	NA	intron (NR_033436, intron 15 of 16)	intron (NR_033436, intron 15 of 16)	89217	NM_001007157	9678	Hs.655688	NM_014660	ENSG00000106443	PHF14	-	PHD finger protein 14	protein-coding
14.0333-7	chr7	107594428	107594843	+	0.0666667	NA	intron (NR_163932, intron 3 of 5)	AluY|SINE|Alu	14389	NR_163937								
20.2667-8	chr6	117965080	117965385	+	0.0666667	NA	intron (NM_001029858, intron 1 of 7)	LTR78B|LTR|ERV1	57968	NM_001029858	222553	Hs.654841	NM_001029858	ENSG00000196376	SLC35F1	C6orf169|dJ230I3.1	solute carrier family 35 member F1	protein-coding
27.3-5	chr3	82672911	82673449	+	0.0666667	NA	Intergenic	Intergenic	687038	NR_147146	105377180	Hs.531803	NR_147146	ENSG00000239440	LINC02008	-	long intergenic non-protein coding RNA 2008	ncRNA
10.2667-9	chr9	122471715	122471966	+	0.0666667	NA	Intergenic	ERV24B_Prim-int|LTR|ERV1	6086	NM_001004451	347168	Hs.632692	NM_001004451	ENSG00000136834	OR1J1	OR9-18|hg32	olfactory receptor family 1 subfamily J member 1	protein-coding
18.7-7	chr2	98724455	98724964	+	0.0666667	NA	intron (NM_012214, intron 2 of 15)	intron (NM_012214, intron 2 of 15)	6423	NM_012214	11320	Hs.177576	NM_012214	ENSG00000071073	MGAT4A	GNT-IV|GNT-IVA|GnT-4a	alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A	protein-coding
11.1667-2	chr12	4616961	4617189	+	0.0666667	NA	intron (NM_001278309, intron 5 of 5)	L1MB7|LINE|L1	12212	NM_001282285	8798	Hs.439530	NM_003845	ENSG00000010219	DYRK4	-	dual specificity tyrosine phosphorylation regulated kinase 4	protein-coding
18.8333-12	chr4	37173169	37173580	+	0.0666667	NA	Intergenic	HERV16-int|LTR|ERVL	68617	NR_039965	100616435		NR_039965	ENSG00000264319	MIR4801	-	microRNA 4801	ncRNA
13.6333-6	chr2	192309219	192309565	+	0.0666667	NA	Intergenic	Charlie5|DNA|hAT-Charlie	-114459	NM_001305134	23671	Hs.144513	NM_016192	ENSG00000144339	TMEFF2	CT120.2|HPP1|TENB2|TPEF|TR|TR-2	transmembrane protein with EGF like and two follistatin like domains 2	protein-coding
18.9667-10	chr5	146103528	146103992	+	0.0666667	NA	intron (NM_001029869, intron 1 of 3)	intron (NM_001029869, intron 1 of 3)	1817	NM_001029869	153770	Hs.162369	NM_001029869	ENSG00000173261	PLAC8L1	-	PLAC8 like 1	protein-coding
12.6	chr1	43150699	43151036	+	0.0666667	NA	intron (NM_001101376, intron 2 of 3)	intron (NM_001101376, intron 2 of 3)	2963	NM_001101376	440585	Hs.657614	NM_001101376	ENSG00000186973	FAM183A	-	family with sequence similarity 183 member A	protein-coding
27-16	chr2	172364583	172365105	+	0.0666667	NA	Intergenic	MLT1H2|LTR|ERVL-MaLR	-62492	NM_001316306	3655	Hs.133397	NM_000210	ENSG00000091409	ITGA6	CD49f|ITGA6B|VLA-6	integrin subunit alpha 6	protein-coding
24.5-6	chr15	56967006	56967665	+	0.0666667	NA	intron (NM_207038, intron 3 of 19)	intron (NM_207038, intron 3 of 19)	47890	NM_001322165	6938	Hs.511504	NM_003205	ENSG00000140262	TCF12	CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64	transcription factor 12	protein-coding
19.8-14	chr22	33270870	33271334	+	0.0666667	NA	Intergenic	Intergenic	162573	NR_134617	105373006	Hs.637171	NR_134617	ENSG00000231253	LINC01640	-	long intergenic non-protein coding RNA 1640	ncRNA
17.2333-2	chr1	196872195	196872645	+	0.0666667	NA	Intergenic	PABL_B-int|LTR|ERV1	-15632	NM_001201551	10877	Hs.710100	NM_006684	ENSG00000134365	CFHR4	CFHL4|FHR-4|FHR4	complement factor H related 4	protein-coding
10.2667-5	chr2	13005877	13006120	+	0.0666667	NA	intron (NR_038434, intron 1 of 5)	L2a|LINE|L2	1015	NR_038434	100506474	Hs.242196	NR_038434	ENSG00000225649	LOC100506474	-	uncharacterized LOC100506474	ncRNA
10.8667-6	chr4	37728089	37728351	+	0.0666667	NA	Intergenic	Intergenic	-41844	NM_001085400	768211	Hs.283378	NM_001085399	ENSG00000181826	RELL1	-	RELT like 1	protein-coding
12.7333-4	chr11	32874092	32874430	+	0.0666667	NA	Intergenic	MSTD-int|LTR|ERVL-MaLR	-18550	NM_001076786	79832	Hs.369368	NM_024774	ENSG00000060749	QSER1	-	glutamine and serine rich 1	protein-coding
6.63334	chr1	56533887	56533986	+	0.0666667	NA	intron (NM_003713, intron 2 of 5)	intron (NM_003713, intron 2 of 5)	45627	NM_003713	8613	Hs.405156	NM_003713	ENSG00000162407	PLPP3	Dri42|LPP3|PAP2B|PPAP2B|VCIP	phospholipid phosphatase 3	protein-coding
10.7333	chr1	180246827	180247065	+	0.0666667	NA	intron (NM_033343, intron 1 of 5)	intron (NM_033343, intron 1 of 5)	16682	NM_033343	89884	Hs.658487	NM_033343	ENSG00000121454	LHX4	CPHD4	LIM homeobox 4	protein-coding
20.7666-3	chr22	21062737	21063344	+	0.0666667	NA	non-coding (NR_027006, exon 11 of 11)	non-coding (NR_027006, exon 11 of 11)	17094	NR_110991	400891	Hs.291198	NM_001013675	ENSG00000187905	LRRC74B	-	leucine rich repeat containing 74B	protein-coding
23.0333-6	chr17	73568696	73569286	+	0.0666667	NA	intron (NM_001144952, intron 1 of 44)	MIRb|SINE|MIR	55308	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA
8.33333	chr10	62078948	62079104	+	0.0666667	NA	intron (NM_001244638, intron 5 of 6)	intron (NM_001244638, intron 5 of 6)	29669	NM_001244638	84159	Hs.535297	NM_032199	ENSG00000150347	ARID5B	DESRT|MRF-2|MRF2	AT-rich interaction domain 5B	protein-coding
20.2667-3	chr11	47322093	47322610	+	0.0666667	NA	intron (NM_130476, intron 27 of 32)	AluY|SINE|Alu	30351	NM_000256	4607	Hs.524906	NM_000256	ENSG00000134571	MYBPC3	CMD1MM|CMH4|FHC|LVNC10|MYBP-C	myosin binding protein C, cardiac	protein-coding
18.2-2	chr1	88803125	88803665	+	0.0666667	NA	intron (NM_001320707, intron 8 of 20)	intron (NM_001320707, intron 8 of 20)	88172	NM_001514	2959	Hs.481852	NM_001514	ENSG00000137947	GTF2B	TF2B|TFIIB	general transcription factor IIB	protein-coding
28.6333-3	chr11	61975931	61976429	+	0.0666667	NA	Intergenic	Intergenic	-8546	NM_002032	2495	Hs.524910	NM_002032	ENSG00000167996	FTH1	FHC|FTH|FTHL6|HFE5|PIG15|PLIF	ferritin heavy chain 1	protein-coding
10.2667-3	chr12	71718950	71719229	+	0.0666667	NA	Intergenic	MLT1F|LTR|ERVL-MaLR	33007	NM_018279	55266	Hs.644802	NM_018279	ENSG00000139291	TMEM19	-	transmembrane protein 19	protein-coding
35.1667-4	chr11	117495968	117496710	+	0.0666667	NA	intron (NM_020693, intron 11 of 32)	intron (NM_020693, intron 11 of 32)	168485	NM_014956	22897	Hs.504009	NM_014956	ENSG00000110274	CEP164	NPHP15	centrosomal protein 164	protein-coding
9.36667-3	chr2	16908047	16908244	+	0.0666667	NA	Intergenic	Intergenic	-242311	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding
26.3666	chr11	114103727	114104471	+	0.0666667	NA	intron (NM_006006, intron 2 of 6)	intron (NM_006006, intron 2 of 6)	40888	NM_001354752	7704	Hs.591945	NM_006006	ENSG00000109906	ZBTB16	PLZF|ZNF145	zinc finger and BTB domain containing 16	protein-coding
31.4-19	chr9	2806864	2807513	+	0.0666667	NA	intron (NM_014878, intron 17 of 17)	AluY|SINE|Alu	36907	NM_014878	9933	Hs.493309	NM_014878	ENSG00000080608	PUM3	HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5	pumilio RNA binding family member 3	protein-coding
15.0333-3	chr10	14040031	14040396	+	0.0666667	NA	intron (NM_018027, intron 2 of 24)	MIR|SINE|MIR	-31663	NM_001318336	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding
20.4333-2	chr17	71994125	71994673	+	0.0666667	NA	Intergenic	Intergenic	31580	NR_110876	102723505	Hs.547482	NR_110876		ROCR	LINC02095	regulator of chondrogenesis RNA	ncRNA
26.7667-13	chr6	62183793	62184458	+	0.0666667	NA	intron (NR_146874, intron 1 of 13)	intron (NR_146874, intron 1 of 13)	102100	NR_146873	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
30.5333-3	chr10	32749986	32750580	+	0.0666667	NA	intron (NM_001321115, intron 29 of 43)	LTR33|LTR|ERVL	151189	NR_132768	106633814		NR_132768		SNORA86	-	small nucleolar RNA, H/ACA box 86	snoRNA
27.6666	chr1	203339479	203340285	+	0.0666667	NA	TTS (NM_002023)	TTS (NM_002023)	11240	NM_002023	2331	Hs.519168	NM_002023	ENSG00000122176	FMOD	FM|SLRR2E	fibromodulin	protein-coding
20.8333-9	chr20	3236393	3236849	+	0.0666667	NA	intron (NM_032034, intron 1 of 18)	intron (NM_032034, intron 1 of 18)	1106	NM_032034	83959	Hs.105607	NM_032034	ENSG00000088836	SLC4A11	BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2	solute carrier family 4 member 11	protein-coding
7.09999	chr6	16283418	16283611	+	0.0666667	NA	intron (NM_006877, intron 6 of 8)	intron (NM_006877, intron 6 of 8)	44927	NM_006877	2766	Hs.484741	NM_006877	ENSG00000137198	GMPR	GMPR 1|GMPR1	guanosine monophosphate reductase	protein-coding
22.1333-3	chr11	66851626	66852161	+	0.0666667	NA	exon (NM_000920, exon 15 of 22)	exon (NM_000920, exon 15 of 22)	-5171	NM_024036	78999	Hs.209979	NM_024036	ENSG00000173621	LRFN4	FIGLER6|SALM3|SALM3.	leucine rich repeat and fibronectin type III domain containing 4	protein-coding
27-7	chr12	113847166	113847956	+	0.0666667	NA	intron (NM_001146698, intron 22 of 24)	intron (NM_001146698, intron 22 of 24)	-73878	NR_110026	100506465	Hs.211461	NR_110025	ENSG00000249550	LINC01234	LCAL84|onco-lncRNA-32	long intergenic non-protein coding RNA 1234	ncRNA
9.53333-6	chr3	69254534	69254743	+	0.0666667	NA	intron (NM_015123, intron 5 of 22)	L1MC4|LINE|L1	131450	NM_015123	23150	Hs.371681	NM_015123	ENSG00000114541	FRMD4B	6030440G05Rik|GRSP1	FERM domain containing 4B	protein-coding
27	chr1	80520238	80520736	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-15268	NR_125941	101927412	Hs.171273	NR_125940	ENSG00000234184	LINC01781	-	long intergenic non-protein coding RNA 1781	ncRNA
22.5-7	chr6	145399943	145400453	+	0.0666667	NA	Intergenic	LOR1-int|LTR|ERV1	286679	NM_001368132	7957	Hs.486696	NM_005670	ENSG00000112425	EPM2A	EPM2|MELF	EPM2A glucan phosphatase, laforin	protein-coding
19.9-10	chr22	33322899	33323406	+	0.0666667	NA	intron (NM_133642, intron 10 of 14)	AluSc8|SINE|Alu	113517	NR_039921	100616295		NR_039921	ENSG00000266012	MIR4764	-	microRNA 4764	ncRNA
23.4-3	chr3	24212283	24212824	+	0.0666667	NA	intron (NM_001354714, intron 2 of 8)	AluSq2|SINE|Alu	61229	NR_121667	101927854	Hs.570625	NR_121667		LOC101927854	-	uncharacterized LOC101927854	ncRNA
26.7333-13	chr6	153350353	153350844	+	0.0666667	NA	Intergenic	Intergenic	-219316	NM_012419	26575	Hs.166313	NM_012419	ENSG00000091844	RGS17	RGS-17|RGSZ2|hRGS17	regulator of G protein signaling 17	protein-coding
7.03333-2	chr3	62399461	62399604	+	0.0666667	NA	exon (NM_183394, exon 28 of 28)	exon (NM_183394, exon 28 of 28)	-25982	NM_018008	55079	Hs.241523	NM_018008	ENSG00000153266	FEZF2	FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312	FEZ family zinc finger 2	protein-coding
27.1333-10	chr3	39489210	39489993	+	0.0666667	NA	intron (NR_103506, intron 2 of 2)	intron (NR_103506, intron 2 of 2)	-12465	NM_001278323	4336	Hs.121333	NM_182935	ENSG00000168314	MOBP	-	myelin associated oligodendrocyte basic protein	protein-coding
16.7667-7	chr4	89166875	89167346	+	0.0666667	NA	Intergenic	L1M4|LINE|L1	54293	NM_145715	166815	Hs.58924	NM_145715	ENSG00000180346	TIGD2	HEL106	tigger transposable element derived 2	protein-coding
22.8-2	chr10	70357584	70358171	+	0.0666667	NA	intron (NR_103468, intron 1 of 2)	intron (NR_103468, intron 1 of 2)	18902	NM_001278213	55222	Hs.7778	NM_018205	ENSG00000172731	LRRC20	-	leucine rich repeat containing 20	protein-coding
9.99999-2	chr3	50616777	50617049	+	0.0666667	NA	promoter-TSS (NM_001243925)	promoter-TSS (NM_001243925)	-218	NM_004635	7867	Hs.234521	NM_004635	ENSG00000114738	MAPKAPK3	3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MDPT3|MK-3	MAPK activated protein kinase 3	protein-coding
24.5667-5	chr14	28855914	28856557	+	0.0666667	NA	Intergenic	Intergenic	-70448	NR_135255	105370424	Hs.375809	NR_135255	ENSG00000257056	LINC02282	-	long intergenic non-protein coding RNA 2282	ncRNA
17.8333-11	chr8	61418312	61418843	+	0.0666667	NA	intron (NM_173519, intron 3 of 5)	intron (NM_173519, intron 3 of 5)	130607	NM_173519	157807	Hs.591874	NM_173519	ENSG00000177182	CLVS1	C6orf212L|CRALBPL|RLBP1L1	clavesin 1	protein-coding
18.6-7	chr14	27297457	27297894	+	0.0666667	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	-314913	NR_039992	100505967	Hs.668484	NR_039992	ENSG00000258548	LINC00645	-	long intergenic non-protein coding RNA 645	ncRNA
8.36667-4	chr3	104276512	104276637	+	0.0666667	NA	Intergenic	HUERS-P3b-int|LTR|ERV1	-752458	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
10.9333-11	chr4	24480756	24481049	+	0.0666667	NA	Intergenic	Intergenic	-7997	NM_001354827	10891	Hs.527078	NM_013261	ENSG00000109819	PPARGC1A	LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1	PPARG coactivator 1 alpha	protein-coding
26.1666-2	chr10	113821469	113822202	+	0.0666667	NA	Intergenic	Intergenic	32247	NM_014881	9937	Hs.1560	NM_014881	ENSG00000198924	DCLRE1A	PSO2|SNM1|SNM1A	DNA cross-link repair 1A	protein-coding
12-2	chr20	59194586	59194870	+	0.0666667	NA	exon (NM_178457, exon 1 of 5)	exon (NM_178457, exon 1 of 5)	3708	NM_178457	128611	Hs.473204	NM_178457	ENSG00000124203	ZNF831	C20orf174	zinc finger protein 831	protein-coding
20-11	chr6	124186547	124187049	+	0.0666667	NA	intron (NM_001300737, intron 2 of 7)	intron (NM_001300737, intron 2 of 7)	-96207	NM_001300740	154215	Hs.656604	NM_153355	ENSG00000188580	NKAIN2	FAM77B|NKAIP2|TCBA|TCBA1	sodium/potassium transporting ATPase interacting 2	protein-coding
12.7667-4	chr4	41713158	41713442	+	0.0666667	NA	Intergenic	Intergenic	35670	NM_003924	8929	Hs.87202	NM_003924	ENSG00000109132	PHOX2B	CCHS|NBLST2|NBPhox|PMX2B	paired like homeobox 2B	protein-coding
24.0667-9	chr6	134477707	134478289	+	0.0666667	NA	intron (NR_125852, intron 1 of 4)	intron (NR_125852, intron 1 of 4)	899	NR_125852	101928231	Hs.634168	NR_125852		CT69	-	cancer/testis associated transcript 69	ncRNA
7.59999	chr6	35807350	35807567	+	0.0666667	NA	intron (NM_182548, intron 1 of 3)	intron (NM_182548, intron 1 of 3)	2106	NM_182548	222662	Hs.367947	NM_182548	ENSG00000197753	LHFPL5	DFNB67|TMHS|dJ510O8.8	LHFPL tetraspan subfamily member 5	protein-coding
11.6-4	chr16	1451712	1452055	+	0.0666667	NA	intron (NM_001287, intron 15 of 24)	intron (NM_001287, intron 15 of 24)	-7394	NM_001143980	645811	Hs.355232	NM_001143980	ENSG00000197599	CCDC154	C16orf29	coiled-coil domain containing 154	protein-coding
24.5-14	chr6	56407897	56408319	+	0.0666667	NA	Intergenic	Intergenic	-13980	NM_001318752	81578	Hs.47629	NM_030820	ENSG00000124749	COL21A1	COLA1L|FP633	collagen type XXI alpha 1 chain	protein-coding
22.1667-11	chr9	95019695	95020283	+	0.0666667	NA	intron (NM_032823, intron 11 of 14)	intron (NM_032823, intron 11 of 14)	-45361	NR_106729	102466518		NR_106729	ENSG00000274115	MIR6081	hsa-mir-6081	microRNA 6081	ncRNA
9.93334	chr11	79493809	79493979	+	0.0666667	NA	Intergenic	Intergenic	-52864	NM_001098816	26011	Hs.213087	NM_001098816	ENSG00000149256	TENM4	Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4	teneurin transmembrane protein 4	protein-coding
15.2667-7	chr18	72445029	72445404	+	0.0666667	NA	Intergenic	MER67C|LTR|ERV1	99126	NM_182511	147381	Hs.569851	NM_182511	ENSG00000141668	CBLN2	-	cerebellin 2 precursor	protein-coding
20.0667-11	chr4	74515513	74515989	+	0.0666667	NA	Intergenic	L1M5|LINE|L1	70615	NM_001657	374	Hs.270833	NM_001657	ENSG00000109321	AREG	AR|AREGB|CRDGF|SDGF	amphiregulin	protein-coding
14.2667-5	chr2	114575057	114575412	+	0.0666667	NA	intron (NM_001321908, intron 2 of 25)	A-rich|Low_complexity|Low_complexity	113657	NM_001321908	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
15.3333-7	chr2	35183660	35184008	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-287571	NR_039629	100616475		NR_039629	ENSG00000265301	MIR548AD	-	microRNA 548ad	ncRNA
17.4667-14	chr8	111162526	111162952	+	0.0666667	NA	intron (NR_125418, intron 1 of 3)	LTR24C|LTR|ERV1	73464	NR_125418	101927487	Hs.630004	NR_125418	ENSG00000253103	LINC01609	-	long intergenic non-protein coding RNA 1609	ncRNA
27.7-7	chr18	60970675	60971198	+	0.0666667	NA	Intergenic	L1MC4|LINE|L1	-362494	NM_031891	28316	Hs.671510	NM_031891	ENSG00000101542	CDH20	CDH7L3|Cdh7	cadherin 20	protein-coding
8.53334	chr15	45880275	45880411	+	0.0666667	NA	intron (NR_135680, intron 2 of 4)	intron (NR_135680, intron 2 of 4)	175148	NR_135680	105370802	Hs.447522	NR_135680	ENSG00000259200	LOC105370802	-	uncharacterized LOC105370802	ncRNA
27.2667-9	chr19	28065843	28066403	+	0.0666667	NA	Intergenic	MER2|DNA|TcMar-Tigger	-272183	NR_027301	148189	Hs.706547	NR_027301	ENSG00000261824	LINC00662	-	long intergenic non-protein coding RNA 662	ncRNA
8.16667-5	chr6	40331198	40331341	+	0.0666667	NA	Intergenic	Intergenic	24737	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA
14.6-16	chrX	116404018	116404409	+	0.0666667	NA	Intergenic	Intergenic	-32393	NM_007231	11254	Hs.522109	NM_007231	ENSG00000268104	SLC6A14	BMIQ11	solute carrier family 6 member 14	protein-coding
10.8333-5	chr3	4630918	4631162	+	0.0666667	NA	intron (NM_001168272, intron 5 of 60)	Ricksha_0|DNA|MULE-MuDR	120550	NR_004428	100126791	Hs.663059	NR_004428	ENSG00000235947	EGOT	EGO|NCRNA00190	eosinophil granule ontogeny transcript	ncRNA
14-5	chr15	80218128	80218429	+	0.0666667	NA	intron (NM_001352888, intron 1 of 2)	AluJr|SINE|Alu	33935	NM_001352888	100996492	Hs.20034	NM_001352888	ENSG00000259417	CTXND1	LINC01314	cortexin domain containing 1	protein-coding
10.4-8	chr2	179549254	179549410	+	0.0666667	NA	intron (NR_148056, intron 3 of 9)	L1MB7|LINE|L1	13256	NM_001113398	151126	Hs.655005	NM_152520	ENSG00000144331	ZNF385B	ZNF533	zinc finger protein 385B	protein-coding
9.36667-6	chr4	130429355	130429495	+	0.0666667	NA	Intergenic	Intergenic	53064	NR_147186	105377420		NR_147186		LINC02479	-	long intergenic non-protein coding RNA 2479	ncRNA
13-5	chr2	25969715	25969962	+	0.0666667	NA	intron (NM_002254, intron 1 of 7)	AluSz6|SINE|Alu	12659	NM_002254	3797	Hs.21611	NM_002254	ENSG00000084731	KIF3C	-	kinesin family member 3C	protein-coding
11.7667-9	chr8	85590528	85590786	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	65019	NR_003594	100288527	Hs.535056	NR_003594		REXO1L2P	-	REXO1 like 2, pseudogene	pseudo
16.2667-7	chr22	50519165	50519519	+	0.0666667	NA	exon (NM_014551, exon 9 of 9)	exon (NM_014551, exon 9 of 9)	6262	NM_001169111	9997	Hs.180903	NM_005138	ENSG00000130489	SCO2	CEMCOX1|ECGF1|Gliostatin|MYP6|PD-ECGF|SCO1L|TP|TYMP|TdRPase	SCO cytochrome c oxidase assembly protein 2	protein-coding
25.4-2	chr10	44891510	44892102	+	0.0666667	NA	intron (NR_033842, intron 2 of 7)	intron (NR_033842, intron 2 of 7)	-19510	NM_001345926	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding
18.3333-11	chr4	99357298	99357799	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-4802	NM_000669	126	Hs.654537	NM_000669	ENSG00000248144	ADH1C	ADH3	alcohol dehydrogenase 1C (class I), gamma polypeptide	protein-coding
11.4333-7	chr9	5151866	5152195	+	0.0666667	NA	Intergenic	L1MEc|LINE|L1	33609	NM_007179	11172	Hs.632648	NM_007179	ENSG00000120210	INSL6	RIF1	insulin like 6	protein-coding
10.1667-9	chr8	130197313	130197467	+	0.0666667	NA	intron (NM_001362925, intron 5 of 29)	AluJb|SINE|Alu	99143	NR_002765	29065	Hs.639318	NR_002765		ASAP1-IT1	ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050	ASAP1 intronic transcript 1	ncRNA
5.8-2	chr7	28239527	28239680	+	0.0666667	NA	intron (NR_034097, intron 3 of 3)	intron (NR_034097, intron 3 of 3)	-58808	NM_175061	221895	Hs.368944	NM_175061	ENSG00000153814	JAZF1	TIP27|ZNF802	JAZF zinc finger 1	protein-coding
27.7-13	chr7	52272457	52273136	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-762837	NM_182595	285877	Hs.381970	NM_182595	ENSG00000221900	POM121L12	-	POM121 transmembrane nucleoporin like 12	protein-coding
21.0667-15	chrX	114076796	114077238	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-138799	NR_131204	105463123	Hs.550218	NR_131204		XACT	-	X active specific transcript	ncRNA
31.7666-3	chr20	49580899	49581797	+	0.0666667	NA	Intergenic	Intergenic	-13211	NM_000961	5740	Hs.302085	NM_000961	ENSG00000124212	PTGIS	CYP8|CYP8A1|PGIS|PTGI	prostaglandin I2 synthase	protein-coding
16.6667-2	chr10	44831853	44832248	+	0.0666667	NA	intron (NR_033842, intron 3 of 7)	Tigger1|DNA|TcMar-Tigger	-79266	NM_001345926	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding
19.3667-6	chr4	48344884	48345332	+	0.0666667	NA	intron (NM_020846, intron 1 of 7)	MIRb|SINE|MIR	3579	NM_020846	57606	Hs.479677	NM_020846	ENSG00000109171	SLAIN2	KIAA1458	SLAIN motif family member 2	protein-coding
37.1666	chr1	110155934	110156902	+	0.0666667	NA	intron (NM_001010898, intron 1 of 11)	Charlie17b|DNA|hAT-Charlie	5924	NM_001010898	388662	Hs.128382	NM_001010898	ENSG00000197106	SLC6A17	MRT48|NTT4	solute carrier family 6 member 17	protein-coding
14.1-4	chr3	113677843	113678123	+	0.0666667	NA	intron (NM_001009899, intron 1 of 6)	(CTCCC)n|Simple_repeat|Simple_repeat	18659	NM_001009899	205717	Hs.632570	NM_001009899	ENSG00000176542	USF3	KIAA2018	upstream transcription factor family member 3	protein-coding
20.1667-16	chr7	46259843	46260145	+	0.0666667	NA	Intergenic	Intergenic	-338722	NM_001013398	3486	Hs.450230	NM_000598	ENSG00000146674	IGFBP3	BP-53|IBP3	insulin like growth factor binding protein 3	protein-coding
14.7-6	chr8	122116160	122116497	+	0.0666667	NA	Intergenic	L1PB4|LINE|L1	452316	NR_131202	105375734	Hs.628341	NR_131202		SMILR	-	smooth muscle induced lncRNA, enhancer of proliferation	ncRNA
28.3-9	chr8	116435056	116435546	+	0.0666667	NA	Intergenic	Intergenic	-110242	NR_046215	100859921	Hs.552281	NR_046215	ENSG00000249917	LINC00536	-	long intergenic non-protein coding RNA 536	ncRNA
10.9333-13	chr7	66316863	66317029	+	0.0666667	NA	intron (NM_003596, intron 3 of 5)	L1PA13|LINE|L1	83462	NR_026873	285908	Hs.50755	NM_181722	ENSG00000179406	LINC00174	NCRNA00174	long intergenic non-protein coding RNA 174	ncRNA
22.7333-6	chr22	30141478	30142109	+	0.0666667	NA	intron (NM_001329457, intron 11 of 11)	AluSx3|SINE|Alu	61329	NM_152510	150280	Hs.120391	NM_152510	ENSG00000176635	HORMAD2	CT46.2	HORMA domain containing 2	protein-coding
21.3-12	chr21	21767151	21767702	+	0.0666667	NA	intron (NR_109958, intron 2 of 4)	intron (NR_109958, intron 2 of 4)	20441	NR_109958	101927821	Hs.334181	NR_109958	ENSG00000233997	LINC01425	-	long intergenic non-protein coding RNA 1425	ncRNA
13.5333-16	chr4	136882047	136882339	+	0.0666667	NA	intron (NR_149105, intron 3 of 3)	L2a|LINE|L2	-311563	NR_134640	729307	Hs.552764	NR_134640		LINC02510	-	long intergenic non-protein coding RNA 2510	ncRNA
28.2-13	chr3	29947117	29947593	+	0.0666667	NA	intron (NM_001003792, intron 11 of 13)	intron (NM_001003792, intron 11 of 13)	-13199	NR_046556	100873977	Hs.581453	NR_046556	ENSG00000235593	RBMS3-AS1	-	RBMS3 antisense RNA 1	ncRNA
16.0667-11	chr20	35492727	35492988	+	0.0666667	NA	intron (NM_007186, intron 22 of 34)	AluSx1|SINE|Alu	32874	NM_001318219	11190	Hs.443976	NM_007186	ENSG00000126001	CEP250	C-NAP1|CEP2|CNAP1|CRDHL2	centrosomal protein 250	protein-coding
11.4667-10	chrX	151927304	151927560	+	0.0666667	NA	Intergenic	L1PA14|LINE|L1	9144	NM_001011550	4103	Hs.37107	NM_002362	ENSG00000147381	MAGEA4	CT1.4|MAGE-41|MAGE-X2|MAGE4|MAGE4A|MAGE4B	MAGE family member A4	protein-coding
6.2	chr8	115742086	115742214	+	0.0666667	NA	Intergenic	Intergenic	-73175	NM_014112	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
24.8666	chr14	64195003	64195707	+	0.0666667	NA	intron (NM_015180, intron 99 of 114)	intron (NM_015180, intron 99 of 114)	-18789	NM_182913	23224	Hs.745014	NM_015180	ENSG00000054654	SYNE2	EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH	spectrin repeat containing nuclear envelope protein 2	protein-coding
22.0333-2	chr12	43176637	43177156	+	0.0666667	NA	Intergenic	Intergenic	21581	NR_146866	105369740	Hs.577746	NR_146866	ENSG00000258331	LINC02461	-	long intergenic non-protein coding RNA 2461	ncRNA
10.9-7	chr6	8197799	8198049	+	0.0666667	NA	Intergenic	L1PB2|LINE|L1	-95329	NR_037618	100526837	Hs.719272	NR_037618		EEF1E1-BLOC1S5	EEF1E1-MUTED	EEF1E1-BLOC1S5 readthrough (NMD candidate)	ncRNA
17.2333-9	chr5	44945939	44946332	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	137188	NM_016640	10884	Hs.124165	NM_016640	ENSG00000112996	MRPS30	MRP-S30|PAP|PDCD9|S30mt	mitochondrial ribosomal protein S30	protein-coding
31.1333-13	chr7	95606976	95607736	+	0.0666667	NA	Intergenic	Intergenic	-10840	NM_002612	5166	Hs.8364	NM_002612	ENSG00000004799	PDK4	-	pyruvate dehydrogenase kinase 4	protein-coding
16.8333	chr10	44415562	44415857	+	0.0666667	NA	Intergenic	L1PA15|LINE|L1	-30612	NM_001178134	6387	Hs.522891	NM_000609	ENSG00000107562	CXCL12	IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1	C-X-C motif chemokine ligand 12	protein-coding
23.3-5	chr2	129827521	129828189	+	0.0666667	NA	Intergenic	L2|LINE|L2	49636	NR_149127	105373615		NR_149127		LINC02572	-	long intergenic non-protein coding RNA 2572	ncRNA
20.3333-11	chr16	90055228	90055533	+	0.0666667	NA	Intergenic	MSTA-int|LTR|ERVL-MaLR	-7597	NR_027336	100130015	Hs.431792	NR_027335	ENSG00000222019	URAHP	URAH	urate (hydroxyiso-) hydrolase, pseudogene	pseudo
18.7667-11	chr5	40172572	40173012	+	0.0666667	NA	Intergenic	Intergenic	120501	NR_104633	102467077	Hs.148993	NR_104633		LINC00603	-	long intergenic non-protein coding RNA 603	ncRNA
20.5667-11	chr6	94392553	94393053	+	0.0666667	NA	Intergenic	Intergenic	674500	NR_152795	643432	Hs.509936	NR_015362		TSG1	-	tumor suppressor TSG1	ncRNA
18.7-10	chr8	52652904	52653424	+	0.0666667	NA	intron (NM_001083617, intron 15 of 23)	ERVL-E-int|LTR|ERVL	61271	NM_014781	9821	Hs.196102	NM_014781	ENSG00000023287	RB1CC1	ATG17|CC1|FIP200|PPP1R131	RB1 inducible coiled-coil 1	protein-coding
20.8667-3	chr11	79140363	79140871	+	0.0666667	NA	intron (NM_001098816, intron 4 of 33)	intron (NM_001098816, intron 4 of 33)	261492	NR_030598	100126333		NR_030598	ENSG00000211997	MIR708	MIRN708|hsa-mir-708	microRNA 708	ncRNA
6.9-2	chr14	45707450	45707553	+	0.0666667	NA	intron (NR_146547, intron 1 of 1)	intron (NR_146547, intron 1 of 1)	8101	NR_146546	105370479		NR_146546	ENSG00000258616	LINC02303	-	long intergenic non-protein coding RNA 2303	ncRNA
20.2667-2	chr10	8679194	8679498	+	0.0666667	NA	Intergenic	L1PB4|LINE|L1	-84955	NR_134492	105376398	Hs.63158	NR_134492		LOC105376398	-	uncharacterized LOC105376398	ncRNA
13.3667-9	chr2	40502107	40502486	+	0.0666667	NA	intron (NM_001112802, intron 1 of 7)	intron (NM_001112802, intron 1 of 7)	10139	NM_001112802	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding
19.2333-4	chr10	68893263	68893647	+	0.0666667	NA	TTS (NM_001130160)	TTS (NM_001130160)	-7860	NM_024045	79009	Hs.522984	NM_024045	ENSG00000107625	DDX50	GU2|GUB|RH-II/GuB|mcdrh	DExD-box helicase 50	protein-coding
16.5333-2	chr10	117268573	117269028	+	0.0666667	NA	intron (NM_003054, intron 13 of 15)	intron (NM_003054, intron 13 of 15)	27686	NM_003054	6571	Hs.596992	NM_003054	ENSG00000165646	SLC18A2	PKDYS2|SVAT|SVMT|VAT2|VMAT2	solute carrier family 18 member A2	protein-coding
19.3-9	chr3	182965083	182965601	+	0.0666667	NA	intron (NM_020640, intron 2 of 6)	intron (NM_020640, intron 2 of 6)	15196	NM_020640	54165	Hs.592789	NM_020640	ENSG00000043093	DCUN1D1	DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3	defective in cullin neddylation 1 domain containing 1	protein-coding
22.8333-5	chr16	27714850	27715232	+	0.0666667	NA	intron (NM_015202, intron 13 of 27)	L1MB7|LINE|L1	3988	NR_147898	100128079	Hs.610277	NR_147898		LOC100128079	-	uncharacterized LOC100128079	ncRNA
22.9-15	chr7	63997303	63997983	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-1163	NR_145488	100419780	Hs.742917	NR_145488		ZNF722P	ZNF722	zinc finger protein 722, pseudogene	pseudo
14.6333-3	chr11	116533565	116533878	+	0.0666667	NA	Intergenic	Intergenic	-105701	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LINC02702	-	long intergenic non-protein coding RNA 2702	ncRNA
32.2333	chr1	12225217	12225996	+	0.0666667	NA	Intergenic	AluY|SINE|Alu	-4424	NM_015378	55187	Hs.439381	NM_015378	ENSG00000048707	VPS13D	SCAR4	vacuolar protein sorting 13 homolog D	protein-coding
6-2	chr7	1138338	1138439	+	0.0666667	NA	promoter-TSS (NM_001350968)	promoter-TSS (NM_001350968)	-131	NM_001350968	84310	Hs.653258	NM_032350	ENSG00000146540	C7orf50	YCR016W	chromosome 7 open reading frame 50	protein-coding
21.8333-6	chr21	34625912	34626352	+	0.0666667	NA	Intergenic	Intergenic	-11019	NM_004414	1827	Hs.282326	NM_004414	ENSG00000159200	RCAN1	ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1	regulator of calcineurin 1	protein-coding
3.13333	chr9	131688566	131688623	+	0.0666667	NA	intron (NM_001304275, intron 1 of 23)	MER34C_|LTR|ERV1	21248	NM_198679	2889	Hs.127897	NM_005312	ENSG00000107263	RAPGEF1	C3G|GRF2	Rap guanine nucleotide exchange factor 1	protein-coding
27.8333-10	chr8	37033795	37034618	+	0.0666667	NA	Intergenic	HAL1M8|LINE|L1	249832	NR_134267	157855	Hs.13861	NM_001031836	ENSG00000215262	KCNU1	KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3	potassium calcium-activated channel subfamily U member 1	protein-coding
24.3667-3	chr17	48174056	48174532	+	0.0666667	NA	intron (NM_001075099, intron 9 of 12)	intron (NM_001075099, intron 9 of 12)	-17783	NR_031607	100302211		NR_031607	ENSG00000221739	MIR1203	MIRN1203|hsa-mir-1203	microRNA 1203	ncRNA
15.4667-5	chr11	32140832	32141147	+	0.0666667	NA	Intergenic	MER58A|DNA|hAT-Charlie	2923	NR_132770	106635521		NR_132770		SNORA88	-	small nucleolar RNA, H/ACA box 88	snoRNA
17.1667-13	chr9	126761045	126761503	+	0.0666667	NA	Intergenic	Intergenic	-43732	NM_001135776	23099	Hs.355581	NM_014007	ENSG00000169155	ZBTB43	ZBTB22B|ZNF-X|ZNF297B	zinc finger and BTB domain containing 43	protein-coding
13.0667-5	chr2	27744531	27744814	+	0.0666667	NA	Intergenic	HAL1|LINE|L1	-27045	NM_145330	9553	Hs.515879	NM_004891	ENSG00000243147	MRPL33	C2orf1|L33mt|MRP-L33|RPL33L	mitochondrial ribosomal protein L33	protein-coding
21.7667-5	chr2	71962121	71962598	+	0.0666667	NA	Intergenic	Intergenic	185503	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
12.8333	chr10	16051183	16051531	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	-190824	NM_001318330	80013	Hs.158870	NM_024948	ENSG00000148481	MINDY3	C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042	MINDY lysine 48 deubiquitinase 3	protein-coding
14.1333-3	chr12	4892338	4892746	+	0.0666667	NA	Intergenic	Intergenic	-17363	NM_000217	3736	Hs.416139	NM_000217	ENSG00000111262	KCNA1	AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1	potassium voltage-gated channel subfamily A member 1	protein-coding
7.63333	chr13	112518742	112518947	+	0.0666667	NA	intron (NM_006322, intron 16 of 21)	intron (NM_006322, intron 16 of 21)	69309	NM_001286278	10426	Hs.224152	NM_006322	ENSG00000126216	TUBGCP3	104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p	tubulin gamma complex associated protein 3	protein-coding
9.8-6	chr5	110709275	110709504	+	0.0666667	NA	intron (NM_001039763, intron 1 of 13)	L1MA2|LINE|L1	17282	NM_001039763	642987	Hs.729154	NM_001039763	ENSG00000186952	TMEM232	-	transmembrane protein 232	protein-coding
17.6333-5	chr17	80981216	80981642	+	0.0666667	NA	Intergenic	Intergenic	-10216	NR_148968	400627	Hs.591201	NR_148968	ENSG00000261924	LOC400627	-	uncharacterized LOC400627	ncRNA
26.8666-4	chr8	89635436	89636174	+	0.0666667	NA	Intergenic	Intergenic	121906	NR_125822	101929709	Hs.651324	NR_125822	ENSG00000251136	LOC101929709	-	uncharacterized LOC101929709	ncRNA
19.1666-2	chr12	14301905	14302469	+	0.0666667	NA	Intergenic	AluY|SINE|Alu	-63445	NM_018179	55729	Hs.504856	NM_018179	ENSG00000171681	ATF7IP	AM|ATF-IP|MCAF|MCAF1|p621	activating transcription factor 7 interacting protein	protein-coding
13.1-12	chr9	106750607	106750954	+	0.0666667	NA	Intergenic	Intergenic	-112386	NM_021224	58499	Hs.370379	NM_021224	ENSG00000148143	ZNF462	ZFPIP|Zfp462	zinc finger protein 462	protein-coding
30.2666	chr12	123569646	123570475	+	0.0666667	NA	Intergenic	AluSq2|SINE|Alu	14267	NR_110049	101927415	Hs.636524	NR_110049		TMED2-DT	-	TMED2 divergent transcript	ncRNA
30.9333-9	chr8	139050713	139051267	+	0.0666667	NA	Intergenic	LTR5B|LTR|ERVK	-136949	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding
19.9333-4	chr10	107895327	107895741	+	0.0666667	NA	intron (NR_125760, intron 4 of 4)	L1MA9|LINE|L1	173759	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
28.7667-4	chr3	124804198	124804832	+	0.0666667	NA	intron (NM_001354766, intron 8 of 13)	AluJr|SINE|Alu	72076	NR_036088	100422864		NR_036088	ENSG00000265981	MIR544B	-	microRNA 544b	ncRNA
25.7-2	chr10	16155243	16155895	+	0.0666667	NA	Intergenic	Intergenic	-281374	NM_001261838	9317	Hs.444321	NM_030664	ENSG00000165983	PTER	HPHRP|RPR-1	phosphotriesterase related	protein-coding
8.83333	chr10	124559312	124559487	+	0.0666667	NA	intron (NM_022126, intron 6 of 6)	intron (NM_022126, intron 6 of 6)	97576	NM_022126	64077	Hs.527748	NM_022126	ENSG00000107902	LHPP	HDHD2B	phospholysine phosphohistidine inorganic pyrophosphate phosphatase	protein-coding
20.0667-15	chr5	45209902	45210446	+	0.0666667	NA	Intergenic	MER57A-int|LTR|ERV1	401227	NM_016640	10884	Hs.124165	NM_016640	ENSG00000112996	MRPS30	MRP-S30|PAP|PDCD9|S30mt	mitochondrial ribosomal protein S30	protein-coding
24.5333-7	chr2	75109202	75109768	+	0.0666667	NA	intron (NM_015727, intron 2 of 3)	intron (NM_015727, intron 2 of 3)	18673	NR_049796	100846995		NR_049796	ENSG00000263909	MIR5000	-	microRNA 5000	ncRNA
16.6-2	chr10	120047275	120047683	+	0.0666667	NA	Intergenic	L1PA7|LINE|L1	88966	NR_039830	100616322		NR_039830	ENSG00000265370	MIR4682	-	microRNA 4682	ncRNA
23.0667-4	chr11	39433559	39434127	+	0.0666667	NA	Intergenic	Intergenic	784985	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
26.7667-11	chr5	126045764	126046438	+	0.0666667	NA	Intergenic	Intergenic	-133476	NR_105042	102546228	Hs.582529	NR_105042	ENSG00000248107	LINC02039	-	long intergenic non-protein coding RNA 2039	ncRNA
19.6-14	chr4	64038889	64039407	+	0.0666667	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	370302	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
19.3333-9	chr20	44155987	44156392	+	0.0666667	NA	intron (NM_020433, intron 2 of 5)	L1MD3|LINE|L1	30999	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding
15.9667-5	chr15	64318440	64318749	+	0.0666667	NA	intron (NM_001329606, intron 1 of 11)	AluJb|SINE|Alu	37579	NM_001329606	53944	Hs.646508	NM_022048	ENSG00000169118	CSNK1G1	CK1gamma1	casein kinase 1 gamma 1	protein-coding
24-21	chr9	35430122	35430655	+	0.0666667	NA	intron (NR_003582, intron 2 of 10)	L1MB7|LINE|L1	23633	NR_003582	158381	Hs.575661	NR_003581	ENSG00000179766	ATP8B5P	FetA	ATPase phospholipid transporting 8B5, pseudogene	pseudo
22.5-6	chr5	30533828	30534353	+	0.0666667	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	653530	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
18.6667-9	chr17	78293840	78294348	+	0.0666667	NA	Intergenic	Intergenic	-15602	NR_073178	100996291	Hs.744493	NR_073178	ENSG00000204277	LINC01993	-	long intergenic non-protein coding RNA 1993	ncRNA
20.7667-14	chr7	101363478	101363955	+	0.0666667	NA	intron (NM_133457, intron 1 of 12)	CpG	841	NM_001278563	136227	Hs.654854	NM_133457	ENSG00000160963	COL26A1	EMI6|EMID2|EMU2|SH2B	collagen type XXVI alpha 1 chain	protein-coding
11.3333-7	chr5	88196440	88196704	+	0.0666667	NA	intron (NM_001349403, intron 10 of 10)	intron (NM_001349403, intron 10 of 10)	72273	NM_001289007	153396	Hs.379972	NM_153354	ENSG00000164180	TMEM161B	FLB3342|PRO1313	transmembrane protein 161B	protein-coding
13.9333-9	chr6	125941243	125941588	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-15355	NM_138571	135114	Hs.72325	NM_138571	ENSG00000111911	HINT3	HINT4	histidine triad nucleotide binding protein 3	protein-coding
19.5-7	chr2	668682	669163	+	0.0666667	NA	3' UTR (NM_001352681, exon 5 of 5)	3' UTR (NM_001352681, exon 5 of 5)	7782	NM_001352681	129787	Hs.6729	NM_152834	ENSG00000151353	TMEM18	lncND	transmembrane protein 18	protein-coding
19.5667-5	chr15	57324943	57325260	+	0.0666667	NA	TTS (NR_120337)	TTS (NR_120337)	5963	NR_120337	101928611	Hs.569495	NR_120337		LINC01413	-	long intergenic non-protein coding RNA 1413	ncRNA
14.2333-10	chr3	39419739	39420126	+	0.0666667	NA	Intergenic	Intergenic	8878	NR_002324	6044	Hs.449909	NR_002324	ENSG00000202363	SNORA62	E2|E2-1|RNE2|RNU108	small nucleolar RNA, H/ACA box 62	snoRNA
17.0333-4	chr2	119471294	119471604	+	0.0666667	NA	intron (NM_002980, intron 4 of 12)	intron (NM_002980, intron 4 of 12)	-5005	NR_147847	107105282	Hs.670673	NR_147846	ENSG00000231013	LOC107105282	-	uncharacterized LOC107105282	ncRNA
21.5-7	chr22	19350909	19351542	+	0.0666667	NA	intron (NM_003325, intron 24 of 24)	intron (NM_003325, intron 24 of 24)	-59506	NM_001835	8218	Hs.368266	NM_001835	ENSG00000070371	CLTCL1	CHC22|CLH22|CLTCL|CLTD	clathrin heavy chain like 1	protein-coding
10.0333-3	chr19	35514057	35514280	+	0.0666667	NA	promoter-TSS (NM_033317)	promoter-TSS (NM_033317)	-519	NM_033317	93099	Hs.417795	NM_033317	ENSG00000161249	DMKN	UNQ729|ZD52F10	dermokine	protein-coding
23.3667-10	chr20	52544738	52545191	+	0.0666667	NA	Intergenic	AluY|SINE|Alu	-75874	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA
26.9	chr10	108469117	108469524	+	0.0666667	NA	Intergenic	Intergenic	-400027	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
10.9333-7	chr14	77180607	77180906	+	0.0666667	NA	Intergenic	Intergenic	-1042	NM_020431	57156	Hs.22452	NM_020431	ENSG00000165548	TMEM63C	C14orf171|CSC1|hsCSC1	transmembrane protein 63C	protein-coding
27.9666-2	chr2	55083661	55084439	+	0.0666667	NA	intron (NM_001321904, intron 1 of 9)	MER21C|LTR|ERVL	-32778	NM_001321859	57142	Hs.637850	NM_007008	ENSG00000115310	RTN4	ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C	reticulon 4	protein-coding
18.7333-23	chr8	106321316	106321732	+	0.0666667	NA	intron (NM_018002, intron 1 of 15)	intron (NM_018002, intron 1 of 15)	51346	NM_018002	55074	Hs.127286	NM_018002	ENSG00000164830	OXR1	Nbla00307|TLDC3	oxidation resistance 1	protein-coding
25.9	chr10	19531582	19532302	+	0.0666667	NA	intron (NM_001142308, intron 32 of 39)	intron (NM_001142308, intron 32 of 39)	196608	NR_120646	101928834	Hs.676482	NR_120646	ENSG00000233968	LOC101928834	-	uncharacterized LOC101928834	ncRNA
19.1667-6	chr13	95323063	95323504	+	0.0666667	NA	Intergenic	AluY|SINE|Alu	-21832	NM_001301830	10257	Hs.508423	NM_005845	ENSG00000125257	ABCC4	MOAT-B|MOATB|MRP4	ATP binding cassette subfamily C member 4	protein-coding
14.1333-9	chr15	56065784	56066167	+	0.0666667	NA	Intergenic	L1MC1|LINE|L1	-72363	NM_001329212	4734	Hs.1565	NM_006154	ENSG00000069869	NEDD4	NEDD4-1|RPF1	NEDD4 E3 ubiquitin protein ligase	protein-coding
20.9-6	chr16	6985254	6985756	+	0.0666667	NA	intron (NM_001142334, intron 1 of 13)	intron (NM_001142334, intron 1 of 13)	211696	NM_001142334	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
15.8667-8	chr6	38877364	38877762	+	0.0666667	NA	intron (NM_001371, intron 52 of 91)	Kanga1|DNA|TcMar-Tc2	75544	NR_038401	100131047	Hs.670957	NR_038401		LOC100131047	-	uncharacterized LOC100131047	ncRNA
8.43333	chr2	82114826	82115003	+	0.0666667	NA	Intergenic	Intergenic	-647968	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
15.0667-12	chr3	194051766	194052054	+	0.0666667	NA	intron (NR_136181, intron 3 of 3)	UCON59|Unknown|Unknown	17619	NR_136181	285389	Hs.157102	NR_136179	ENSG00000230102	LINC02028	-	long intergenic non-protein coding RNA 2028	ncRNA
8.16667-2	chr1	161332178	161332300	+	0.0666667	NA	intron (NM_003001, intron 3 of 5)	AluJo|SINE|Alu	17858	NR_103459	6391	Hs.444472	NM_003001	ENSG00000143252	SDHC	CYB560|CYBL|PGL3|QPS1|SDH3	succinate dehydrogenase complex subunit C	protein-coding
22.2333-12	chr4	33563106	33563485	+	0.0666667	NA	Intergenic	Intergenic	476598	NR_125902	101928622	Hs.631687	NR_125902	ENSG00000250954	LOC101928622	-	uncharacterized LOC101928622	ncRNA
27.1-7	chr3	181983737	181984238	+	0.0666667	NA	intron (NR_104146, intron 5 of 7)	AluSx|SINE|Alu	31623	NR_104146	100996490	Hs.606987	NR_104146	ENSG00000242512	LINC01206	-	long intergenic non-protein coding RNA 1206	ncRNA
16.6333-7	chr3	26349613	26350051	+	0.0666667	NA	Intergenic	L1MEg1|LINE|L1	-272974	NM_052953	116135	Hs.517868	NM_052953	ENSG00000179796	LRRC3B	LRP15	leucine rich repeat containing 3B	protein-coding
12.7-5	chr21	33022081	33022321	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-3734	NM_005806	10215	Hs.176977	NM_005806	ENSG00000205927	OLIG2	BHLHB1|OLIGO2|PRKCBP2|RACK17|bHLHe19	oligodendrocyte transcription factor 2	protein-coding
21.9333-8	chr16	86591676	86592140	+	0.0666667	NA	Intergenic	Intergenic	13399	NM_005250	2300	Hs.533830	NM_005250	ENSG00000176678	FOXL1	FKH6|FKHL11|FREAC7	forkhead box L1	protein-coding
8.26666	chr12	120181073	120181300	+	0.0666667	NA	intron (NM_006836, intron 5 of 57)	AluJb|SINE|Alu	13529	NM_006836	10985	Hs.298716	NM_006836	ENSG00000089154	GCN1	GCN1L|GCN1L1|PRIC295	GCN1 activator of EIF2AK4	protein-coding
11.4-4	chr18	7323294	7323605	+	0.0666667	NA	Intergenic	Intergenic	92345	NM_001105581	339291	Hs.647588	NM_001105581	ENSG00000206422	LRRC30	-	leucine rich repeat containing 30	protein-coding
22.8333-6	chr6	15403044	15403424	+	0.0666667	NA	intron (NM_004973, intron 2 of 17)	intron (NM_004973, intron 2 of 17)	154379	NM_001267040	3720	Hs.269059	NM_004973	ENSG00000008083	JARID2	JMJ	jumonji and AT-rich interaction domain containing 2	protein-coding
12.0333-5	chr5	173277548	173277754	+	0.0666667	NA	Intergenic	Intergenic	-26079	NR_162132	113219469		NR_162132		MIR12118	-	microRNA 12118	ncRNA
15.9-2	chr1	22590101	22590530	+	0.0666667	NA	TTS (NM_001006943)	TTS (NM_001006943)	26826	NM_001006943	2046	Hs.283613	NM_020526	ENSG00000070886	EPHA8	EEK|EK3|HEK3	EPH receptor A8	protein-coding
22.2667-9	chr8	51921759	51922240	+	0.0666667	NA	Intergenic	Intergenic	-22813	NM_001286782	115294	Hs.671268	NM_052937	ENSG00000168300	PCMTD1	-	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding
8.8-2	chr5	25420919	25421100	+	0.0666667	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	230056	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
26.6-13	chr3	77416644	77417284	+	0.0666667	NA	intron (NM_001290039, intron 2 of 26)	intron (NM_001290039, intron 2 of 26)	318952	NM_001128929	6092	Hs.13305	NM_002942	ENSG00000185008	ROBO2	SAX3	roundabout guidance receptor 2	protein-coding
23.0667-11	chr2	172157515	172157914	+	0.0666667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	54708	NR_126376	104326193	Hs.600690	NR_126376	ENSG00000236651	DLX2-DT	DLX2-AS1|TCONS_00003049	DLX2 divergent transcript	ncRNA
16.9333-17	chr8	113376034	113376465	+	0.0666667	NA	intron (NM_001363185, intron 1 of 66)	intron (NM_001363185, intron 1 of 66)	903	NM_198124	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
20.9-14	chr3	30949643	30950213	+	0.0666667	NA	Intergenic	Intergenic	-55267	NM_207359	339896	Hs.657052	NM_207359	ENSG00000144644	GADL1	ADC|CSADC|HuADC|HuCSADC	glutamate decarboxylase like 1	protein-coding
20.7667-16	chr8	128342987	128343424	+	0.0666667	NA	Intergenic	Intergenic	193089	NR_031613	100302281		NR_031613	ENSG00000221261	MIR1208	MIRN1208|hsa-mir-1208	microRNA 1208	ncRNA
10.2-5	chr6	133060825	133061126	+	0.0666667	NA	Intergenic	L1MA9|LINE|L1	-27105	NR_026969	285735	Hs.407549	NM_001037231		LINC00326	NCRNA00326	long intergenic non-protein coding RNA 326	ncRNA
9.39999	chr2	58340051	58340312	+	0.0666667	NA	Intergenic	Intergenic	64304	NR_147010	105374744	Hs.447687	NR_147010	ENSG00000225226	LINC01795	-	long intergenic non-protein coding RNA 1795	ncRNA
5.8	chr11	96767539	96767684	+	0.0666667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	259186	NR_135097	105369443	Hs.599377	NR_135097	ENSG00000256684	LINC02737	-	long intergenic non-protein coding RNA 2737	ncRNA
20.9667-2	chr1	184241577	184242000	+	0.0666667	NA	Intergenic	Intergenic	-145241	NM_030806	81563	Hs.497159	NM_030806	ENSG00000116667	C1orf21	PIG13	chromosome 1 open reading frame 21	protein-coding
14.5667-7	chr7	139041733	139042098	+	0.0666667	NA	Intergenic	Intergenic	2242	NR_162108	113218503		NR_162108		MIR10399	-	microRNA 10399	ncRNA
14.3-8	chr3	85408571	85408832	+	0.0666667	NA	intron (NM_001167674, intron 1 of 9)	intron (NM_001167674, intron 1 of 9)	22991	NR_049870	100847077		NR_049870	ENSG00000264084	MIR5688	-	microRNA 5688	ncRNA
8.2	chr10	106149739	106149925	+	0.0666667	NA	intron (NR_134330, intron 1 of 4)	intron (NR_134330, intron 1 of 4)	9667	NR_134329	105378470	Hs.142910	NR_134329	ENSG00000229775	LINC02624	-	long intergenic non-protein coding RNA 2624	ncRNA
11.8333-4	chr20	43758871	43759122	+	0.0666667	NA	Intergenic	HAL1b|LINE|L1	-31994	NM_176791	149699	Hs.447626	NM_176791	ENSG00000124196	GTSF1L	C20orf65|FAM112A|dJ1028D15.4	gametocyte specific factor 1 like	protein-coding
16.3-7	chr2	136062826	136063166	+	0.0666667	NA	Intergenic	L2a|LINE|L2	53239	NM_001008540	7852	Hs.593413	NM_003467	ENSG00000121966	CXCR4	CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS	C-X-C motif chemokine receptor 4	protein-coding
16.7667	chr1	238804838	238805310	+	0.0666667	NA	Intergenic	L1ME1|LINE|L1	-319057	NR_015407	339535	Hs.532047	NR_015407	ENSG00000215808	LINC01139	LINK-A|LINKA	long intergenic non-protein coding RNA 1139	ncRNA
12.0333-2	chr17	41510765	41511019	+	0.0666667	NA	Intergenic	Intergenic	-5280	NM_002274	3860	Hs.654550	NM_002274	ENSG00000171401	KRT13	CK13|K13|WSN2	keratin 13	protein-coding
34.1333-4	chr19	13889585	13890151	+	0.0666667	NA	exon (NM_001345846, exon 5 of 8)	exon (NM_001345846, exon 5 of 8)	12619	NM_001098622	342977	Hs.127982	NM_001098622	ENSG00000187556	NANOS3	NANOS1L|NOS3|ZC2HC12C	nanos C2HC-type zinc finger 3	protein-coding
19.9333-15	chr5	9610406	9610926	+	0.0666667	NA	Intergenic	L1M4|LINE|L1	19685	NM_019599	50834	Hs.567492	NM_019599	ENSG00000169777	TAS2R1	T2R1|TRB7	taste 2 receptor member 1	protein-coding
12.7333-5	chr11	67241291	67241620	+	0.0666667	NA	intron (NM_001256405, intron 1 of 9)	intron (NM_001256405, intron 1 of 9)	1441	NM_001256405	22992	Hs.124147	NM_012308	ENSG00000173120	KDM2A	CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA	lysine demethylase 2A	protein-coding
21.3667-8	chr3	71148578	71149125	+	0.0666667	NA	intron (NR_146142, intron 6 of 19)	L2c|LINE|L2	-16654	NM_001349343	27086	Hs.59368	NM_032682	ENSG00000114861	FOXP1	12CC4|HSPC215|MFH|QRF1|hFKH1B	forkhead box P1	protein-coding
19.8-13	chr22	33015612	33016195	+	0.0666667	NA	intron (NM_003490, intron 1 of 13)	AluSq2|SINE|Alu	-9082	NM_133633	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding
18.5666-2	chr2	108479322	108479860	+	0.0666667	NA	intron (NR_028063, intron 8 of 21)	AluSx|SINE|Alu	30385	NM_181453	9648	Hs.436505	NM_181453	ENSG00000135968	GCC2	GCC185|RANBP2L4|REN53	GRIP and coiled-coil domain containing 2	protein-coding
21.4-2	chr10	4771941	4772320	+	0.0666667	NA	Intergenic	Intergenic	-54047	NR_073127	83592	Hs.657944	NM_031436	ENSG00000165568	AKR1E2	AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR	aldo-keto reductase family 1 member E2	protein-coding
11.8333-10	chr8	62837251	62837497	+	0.0666667	NA	intron (NM_001304533, intron 4 of 6)	intron (NM_001304533, intron 4 of 6)	-140487	NR_027378	643763	Hs.491856	NM_001039769	ENSG00000274956	NKAIN3-IT1	UG0898H09	NKAIN3 intronic transcript	ncRNA
20.0667-7	chr2	39970086	39970635	+	0.0666667	NA	intron (NR_038441, intron 2 of 4)	MER5A|DNA|hAT-Charlie	52726	NR_038441	100128590	Hs.744988	NR_038441	ENSG00000227028	SLC8A1-AS1	-	SLC8A1 antisense RNA 1	ncRNA
8.86667-2	chr8	14695573	14695706	+	0.0666667	NA	intron (NM_139167, intron 1 of 7)	L1ME5|LINE|L1	157871	NR_029875	494332		NR_029875	ENSG00000199127	MIR383	MIRN383|hsa-mir-383|mir-383	microRNA 383	ncRNA
22.1-11	chr6	51766078	51766706	+	0.0666667	NA	intron (NM_138694, intron 55 of 66)	intron (NM_138694, intron 55 of 66)	144522	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
10.4-10	chr3	183675620	183675829	+	0.0666667	NA	intron (NM_001349426, intron 6 of 6)	AluJr4|SINE|Alu	-22073	NM_018023	55689	Hs.632575	NM_018023	ENSG00000163872	YEATS2	-	YEATS domain containing 2	protein-coding
18.8667-5	chr14	74238638	74239077	+	0.0666667	NA	promoter-TSS (NM_182894)	promoter-TSS (NM_182894)	-592	NM_182894	338917	Hs.449771	NM_182894	ENSG00000119614	VSX2	CHX10|HOX10|MCOP2|MCOPCB3|RET1	visual system homeobox 2	protein-coding
11.0333-4	chr5	115352219	115352385	+	0.0666667	NA	Intergenic	Intergenic	-55648	NM_001040440	153733	Hs.436121	NM_152549	ENSG00000164221	CCDC112	MBC1	coiled-coil domain containing 112	protein-coding
10.7333-7	chr3	56807339	56807605	+	0.0666667	NA	intron (NM_001128615, intron 4 of 12)	intron (NM_001128615, intron 4 of 12)	-5523	NM_019555	50650	Hs.476402	NM_019555	ENSG00000163947	ARHGEF3	GEF3|STA3|XPLN	Rho guanine nucleotide exchange factor 3	protein-coding
33.4667-3	chr2	62674784	62675553	+	0.0666667	NA	intron (NM_001142615, intron 1 of 22)	intron (NM_001142615, intron 1 of 22)	1290	NM_001142615	23301	Hs.271667	NM_015252	ENSG00000115504	EHBP1	HPC12|NACSIN	EH domain binding protein 1	protein-coding
15.4667	chr1	176269329	176269768	+	0.0666667	NA	Intergenic	Tigger4a|DNA|TcMar-Tigger	-62262	NM_022457	64326	Hs.523744	NM_022457	ENSG00000143207	COP1	RFWD2|RNF200	COP1 E3 ubiquitin ligase	protein-coding
24.1333-12	chr7	28792582	28793073	+	0.0666667	NA	intron (NM_001011666, intron 3 of 6)	intron (NM_001011666, intron 3 of 6)	106694	NM_001011666	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5|CREBPA	cAMP responsive element binding protein 5	protein-coding
26.4333-13	chr4	85396627	85397024	+	0.0666667	NA	Intergenic	Intergenic	-78325	NM_001025616	83478	Hs.444229	NM_031305	ENSG00000138639	ARHGAP24	FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP	Rho GTPase activating protein 24	protein-coding
32.1333-7	chr6	44730873	44731493	+	0.0666667	NA	Intergenic	Intergenic	-179302	NR_134609	105375075	Hs.123393	NR_134609		LOC105375075	-	uncharacterized LOC105375075	ncRNA
32.1-3	chr16	11546488	11547382	+	0.0666667	NA	TTS (NR_024320)	TTS (NR_024320)	-19688	NM_001370704	400499	Hs.459937	NM_001370704	ENSG00000188897	LOC400499	-	putative uncharacterized protein LOC400499	protein-coding
12.4333-4	chr18	50658519	50658777	+	0.0666667	NA	intron (NM_001292039, intron 1 of 4)	intron (NM_001292039, intron 1 of 4)	98561	NM_002747	5596	Hs.433728	NM_002747	ENSG00000141639	MAPK4	ERK-4|ERK4|PRKM4|p63-MAPK|p63MAPK	mitogen-activated protein kinase 4	protein-coding
20.8-7	chr14	103052096	103052442	+	0.0666667	NA	intron (NM_006035, intron 1 of 36)	intron (NM_006035, intron 1 of 36)	5280	NM_006035	9578	Hs.654634	NM_006035	ENSG00000198752	CDC42BPB	MRCKB	CDC42 binding protein kinase beta	protein-coding
25.6667-2	chr14	45382236	45382660	+	0.0666667	NA	Intergenic	Intergenic	-129246	NM_018353	55320	Hs.732769	NM_018353	ENSG00000129534	MIS18BP1	C14orf106|HSA242977|KNL2|M18BP1	MIS18 binding protein 1	protein-coding
12.9667-7	chr2	141701316	141701651	+	0.0666667	NA	intron (NM_018557, intron 2 of 90)	intron (NM_018557, intron 2 of 90)	430218	NM_018557	53353	Hs.656461	NM_018557	ENSG00000168702	LRP1B	LRP-1B|LRP-DIT|LRPDIT	LDL receptor related protein 1B	protein-coding
5.93334-2	chr14	94715971	94716061	+	0.0666667	NA	Intergenic	MLT2D|LTR|ERVL	54146	NM_173849	145258	Hs.440438	NM_173849	ENSG00000133937	GSC	SAMS	goosecoid homeobox	protein-coding
19.5333	chr10	61625553	61626112	+	0.0666667	NA	Intergenic	L2a|LINE|L2	-37097	NM_001366907	219621	Hs.673160	NM_173554	ENSG00000183346	CABCOCO1	C10orf107	ciliary associated calcium binding coiled-coil 1	protein-coding
22.8-3	chr11	43508610	43509128	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-50787	NR_031577	100313777		NR_031577	ENSG00000211568	MIR670	hsa-mir-670	microRNA 670	ncRNA
4.63334-2	chr6	36462531	36462601	+	0.0666667	NA	intron (NR_104481, intron 1 of 3)	MER5A|DNA|hAT-Charlie	19566	NR_104480	222658	Hs.188757	NM_173562	ENSG00000112078	KCTD20	C6orf69|dJ108K11.3	potassium channel tetramerization domain containing 20	protein-coding
15.0667-7	chr19	39393125	39393501	+	0.0666667	NA	intron (NM_001317770, intron 2 of 3)	AluSx|SINE|Alu	1935	NM_017592	55588	Hs.611541	NM_017592	ENSG00000063322	MED29	IXL|MED2	mediator complex subunit 29	protein-coding
16.7667-10	chr7	90212189	90212640	+	0.0666667	NA	promoter-TSS (NR_110029)	promoter-TSS (NR_110029)	674	NM_001244945	261729	Hs.489051	NM_152999	ENSG00000157214	STEAP2	IPCA1|PCANAP1|PUMPCn|STAMP1|STMP	STEAP2 metalloreductase	protein-coding
20.5333-14	chr7	90690410	90690897	+	0.0666667	NA	intron (NM_001287135, intron 2 of 14)	intron (NM_001287135, intron 2 of 14)	-18745	NM_012395	5218	Hs.258576	NM_012395	ENSG00000058091	CDK14	PFTAIRE1|PFTK1	cyclin dependent kinase 14	protein-coding
10.0333-6	chr4	58469902	58470135	+	0.0666667	NA	Intergenic	Intergenic	66310	NR_133943	105377671	Hs.225045	NR_133943	ENSG00000250340	LINC02494	-	long intergenic non-protein coding RNA 2494	ncRNA
25.8333-10	chr7	15500268	15500771	+	0.0666667	NA	intron (NM_001004320, intron 3 of 12)	intron (NM_001004320, intron 3 of 12)	61496	NM_001004320	392636	Hs.670634	NM_001004320	ENSG00000187546	AGMO	TMEM195	alkylglycerol monooxygenase	protein-coding
21.4333-2	chr1	115923653	115924091	+	0.0666667	NA	intron (NR_125970, intron 4 of 4)	intron (NR_125970, intron 4 of 4)	4496	NR_125969	101928995	Hs.559119	NR_125969	ENSG00000228127	LINC01649	-	long intergenic non-protein coding RNA 1649	ncRNA
28.6666-4	chr15	81398555	81399361	+	0.0666667	NA	intron (NR_120365, intron 6 of 6)	intron (NR_120365, intron 6 of 6)	-24745	NM_001080532	342125	Hs.253489	NM_181841	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding
12.3-4	chr18	38885352	38885581	+	0.0666667	NA	Intergenic	Intergenic	736709	NR_030628	100126323		NR_030628	ENSG00000283615	MIR924	MIRN924|hsa-mir-924	microRNA 924	ncRNA
20.0667-12	chr4	151388863	151389303	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-20093	NM_001109977	729830	Hs.633810	NM_001109977	ENSG00000164142	FAM160A1	-	family with sequence similarity 160 member A1	protein-coding
20.0333-16	chr8	138105330	138105921	+	0.0666667	NA	Intergenic	Intergenic	-22080	NR_161374	401478	Hs.654931	NM_001354876		LOC401478	-	uncharacterized LOC401478	ncRNA
7.53333-2	chr14	76577111	76577286	+	0.0666667	NA	Intergenic	L1MB5|LINE|L1	-184270	NM_014909	22846	Hs.525479	NM_014909	ENSG00000071246	VASH1	KIAA1036|TTCP 1	vasohibin 1	protein-coding
29.1667-6	chr2	103532767	103533327	+	0.0666667	NA	Intergenic	L1PB3|LINE|L1	-548618	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
20.6-8	chr3	53438265	53438840	+	0.0666667	NA	Intergenic	Arthur1B|DNA|hAT-Tip100	-56059	NM_000720	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding
21.5667-3	chr12	88930276	88930822	+	0.0666667	NA	Intergenic	Intergenic	89143	NR_038385	728084	Hs.132563	NR_038385	ENSG00000246363	LINC02458	-	long intergenic non-protein coding RNA 2458	ncRNA
20.8333	chr1	162388596	162389060	+	0.0666667	NA	Intergenic	Intergenic	7100	NM_001085375	400793	Hs.447011	NM_001085375	ENSG00000239887	C1orf226	-	chromosome 1 open reading frame 226	protein-coding
20.9667	chr1	40569129	40569642	+	0.0666667	NA	Intergenic	L1ME4b|LINE|L1	37748	NM_152373	127396	Hs.524767	NM_152373	ENSG00000117010	ZNF684	-	zinc finger protein 684	protein-coding
19.4333-10	chr6	91643161	91643547	+	0.0666667	NA	intron (NR_104154, intron 2 of 3)	L1MB3|LINE|L1	47074	NR_104154	101929083	Hs.586238	NR_104154		CASC6	-	cancer susceptibility 6	ncRNA
11.5667-2	chr11	443031	443362	+	0.0666667	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	-1185	NM_001012302	338440	Hs.501622	NM_001012302	ENSG00000185101	ANO9	PIG5|TMEM16J|TP53I5	anoctamin 9	protein-coding
11.2667-3	chr17	60842416	60842692	+	0.0666667	NA	intron (NM_001330413, intron 7 of 25)	intron (NM_001330413, intron 7 of 25)	164703	NM_001353144	54828	Hs.655028	NM_017679	ENSG00000141376	BCAS3	GAOB1|MAAB	BCAS3 microtubule associated cell migration factor	protein-coding
16.5-4	chr2	97942827	97943292	+	0.0666667	NA	intron (NM_015348, intron 1 of 40)	(GAAA)n|Simple_repeat|Simple_repeat	52889	NM_015348	23505	Hs.469376	NM_015348	ENSG00000075568	TMEM131	CC28|PRO1048|RW1|YR-23	transmembrane protein 131	protein-coding
23.9-5	chr19	31337714	31338334	+	0.0666667	NA	intron (NR_138034, intron 1 of 1)	intron (NR_138034, intron 1 of 1)	11412	NR_138036	57616	Hs.278436	NM_020856	ENSG00000121297	TSHZ3	TSH3|ZNF537	teashirt zinc finger homeobox 3	protein-coding
32.2	chr12	48664942	48665512	+	0.0666667	NA	intron (NM_017822, intron 7 of 9)	intron (NM_017822, intron 7 of 9)	2366	NR_002951	677794	Hs.683444	NR_002951	ENSG00000207313	SNORA2B	ACA2b	small nucleolar RNA, H/ACA box 2B	snoRNA
16.3-3	chr14	99961159	99961622	+	0.0666667	NA	Intergenic	AluYm1|SINE|Alu	-10032	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding
22.4-17	chr5	45857342	45857823	+	0.0666667	NA	Intergenic	L1ME3Cz|LINE|L1	-161202	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
15.6-5	chr19	29165918	29166345	+	0.0666667	NA	Intergenic	Intergenic	47020	NM_006003	7386	Hs.743307	NM_006003	ENSG00000169021	UQCRFS1	RIP1|RIS1|RISP|UQCR5	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	protein-coding
27.9667-10	chr6	66030606	66031025	+	0.0666667	NA	Intergenic	Intergenic	242936	NR_026540	442229	Hs.390414	NR_026540		SLC25A51P1	MCART3P|bA707M13.1	SLC25A51 pseudogene 1	pseudo
12.8-5	chr7	92686913	92687247	+	0.0666667	NA	intron (NM_001259, intron 4 of 7)	intron (NM_001259, intron 4 of 7)	-96690	NR_109929	257415	Hs.18564	NM_152789	ENSG00000234545	FAM133B	-	family with sequence similarity 133 member B	protein-coding
25.9666-3	chr8	116126836	116127540	+	0.0666667	NA	intron (NR_046215, intron 5 of 13)	MIR|SINE|MIR	197871	NR_046215	100859921	Hs.552281	NR_046215	ENSG00000249917	LINC00536	-	long intergenic non-protein coding RNA 536	ncRNA
25.8667-9	chr5	18785824	18786423	+	0.0666667	NA	Intergenic	Intergenic	978849	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
18.7333-2	chr1	174352529	174352945	+	0.0666667	NA	intron (NM_001366445, intron 11 of 13)	L1M1|LINE|L1	77637	NM_001366449	9910	Hs.585378	NM_014857	ENSG00000152061	RABGAP1L	HHL|TBC1D18	RAB GTPase activating protein 1 like	protein-coding
8.5	chr10	48703769	48703980	+	0.0666667	NA	intron (NM_020945, intron 1 of 61)	intron (NM_020945, intron 1 of 61)	18411	NM_020945	57705	Hs.287379	NM_020945	ENSG00000128815	WDFY4	C10orf64	WDFY family member 4	protein-coding
18.8333-17	chr6	61894410	61894952	+	0.0666667	NA	exon (NM_001350622, exon 6 of 10)	exon (NM_001350622, exon 6 of 10)	320551	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
8.66667-2	chr21	28633638	28633822	+	0.0666667	NA	Intergenic	Intergenic	94412	NR_026553	118421	Hs.438549	NR_026552	ENSG00000226935	LINC00161	C21orf100|Linc-USP16|NCRNA00161	long intergenic non-protein coding RNA 161	ncRNA
29.4-7	chr3	79018177	79018934	+	0.0666667	NA	5' UTR (NM_133631, exon 1 of 29)	5' UTR (NM_133631, exon 1 of 29)	904	NM_001145845	6091	Hs.744218	NM_002941	ENSG00000169855	ROBO1	DUTT1|SAX3	roundabout guidance receptor 1	protein-coding
24.7-2	chr10	21003914	21004490	+	0.0666667	NA	intron (NM_001173484, intron 3 of 6)	intron (NM_001173484, intron 3 of 6)	-106600	NM_006393	10529	Hs.5025	NM_006393	ENSG00000078114	NEBL	LASP2|LNEBL	nebulette	protein-coding
25.8-14	chr2	103547442	103548017	+	0.0666667	NA	Intergenic	Intergenic	-563300	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
11.3-2	chr14	58114921	58115188	+	0.0666667	NA	intron (NM_001001872, intron 4 of 7)	L1PA15|LINE|L1	37159	NM_001001872	145407	Hs.26766	NM_001001872	ENSG00000139971	ARMH4	C14orf37|UT2|c14_5376	armadillo like helical domain containing 4	protein-coding
15.9667-8	chr2	164441104	164441443	+	0.0666667	NA	Intergenic	Intergenic	127222	NM_001303422	2888	Hs.411881	NM_004490	ENSG00000115290	GRB14	-	growth factor receptor bound protein 14	protein-coding
19.6667-2	chr18	61647529	61647979	+	0.0666667	NA	Intergenic	Intergenic	-100422	NR_103449	100996669	Hs.586981	NR_103449		LINC01544	-	long intergenic non-protein coding RNA 1544	ncRNA
23.2-9	chr2	77604355	77604779	+	0.0666667	NA	Intergenic	Intergenic	-82134	NM_001282924	80059	Hs.285782	NM_024993	ENSG00000176204	LRRTM4	-	leucine rich repeat transmembrane neuronal 4	protein-coding
15.5-10	chr4	100354557	100354981	+	0.0666667	NA	Intergenic	L1MEc|LINE|L1	40478	NR_135619	107399301		NR_135619		SNORA101A	-	small nucleolar RNA, H/ACA box 101A	snoRNA
18.6-5	chr12	108227188	108227637	+	0.0666667	NA	intron (NM_001304447, intron 7 of 9)	MIR3|SINE|MIR	93250	NM_001142345	1240	Hs.197143	NM_004072	ENSG00000174600	CMKLR1	CHEMERINR|ChemR23|DEZ|RVER1	chemerin chemokine-like receptor 1	protein-coding
18.5667-5	chr18	74991009	74991474	+	0.0666667	NA	intron (NM_017757, intron 7 of 7)	intron (NM_017757, intron 7 of 7)	214272	NM_001306093	284273	Hs.465433	NM_175907	ENSG00000180011	ZADH2	PRG-3	zinc binding alcohol dehydrogenase domain containing 2	protein-coding
13.5	chr1	188626089	188626430	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	1182631	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
8.73333	chr1	42118221	42118379	+	0.0666667	NA	Intergenic	Intergenic	-35110	NM_007102	2981	Hs.32966	NM_007102	ENSG00000044012	GUCA2B	GCAP-II|UGN	guanylate cyclase activator 2B	protein-coding
7.1-2	chr12	41350880	41350987	+	0.0666667	NA	intron (NM_001164595, intron 3 of 9)	intron (NM_001164595, intron 3 of 9)	-86806	NM_013377	29951	Hs.380044	NM_013377	ENSG00000165966	PDZRN4	LNX4|SAMCAP3L	PDZ domain containing ring finger 4	protein-coding
21.8667-4	chr16	3114143	3114592	+	0.0666667	NA	intron (NM_003456, intron 2 of 6)	MIRc|SINE|MIR	1231	NR_024166	81854	Hs.669490	NR_024166		ZNF205-AS1	-	ZNF205 antisense RNA 1	ncRNA
7.5-3	chr3	187720549	187720747	+	0.0666667	NA	TTS (NM_001134738)	TTS (NM_001134738)	14259	NM_001134738	604	Hs.478588	NM_001706	ENSG00000113916	BCL6	BCL5|BCL6A|LAZ3|ZBTB27|ZNF51	BCL6 transcription repressor	protein-coding
15.7333-10	chr20	50726647	50726991	+	0.0666667	NA	Intergenic	Intergenic	-4761	NM_032521	84612	Hs.589848	NM_032521	ENSG00000124171	PARD6B	PAR6B	par-6 family cell polarity regulator beta	protein-coding
12.9-7	chr2	205580226	205580596	+	0.0666667	NA	intron (NM_205863, intron 21 of 21)	intron (NM_205863, intron 21 of 21)	-102089	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding
10.9333-8	chr16	72117606	72117881	+	0.0666667	NA	Intergenic	Intergenic	-23365	NM_001142318	54957	Hs.134406	NM_017853	ENSG00000140830	TXNL4B	DLP|Dim2	thioredoxin like 4B	protein-coding
16.6667-14	chr7	28687131	28687462	+	0.0666667	NA	intron (NM_001011666, intron 1 of 6)	intron (NM_001011666, intron 1 of 6)	1163	NM_001011666	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5|CREBPA	cAMP responsive element binding protein 5	protein-coding
36.3	chr10	85984829	85985432	+	0.0666667	NA	intron (NM_017551, intron 4 of 15)	MER20|DNA|hAT-Charlie	279658	NR_029907	442911		NR_029907	ENSG00000199104	MIR346	MIRN346|hsa-mir-346|miR-346|miRNA346	microRNA 346	ncRNA
18.2333-13	chr7	47327325	47327789	+	0.0666667	NA	intron (NM_022748, intron 20 of 30)	intron (NM_022748, intron 20 of 30)	137246	NR_145813	109623468		NR_145813		SNORD151	-	small nucleolar RNA, C/D box 151	snoRNA
12.5	chr11	40962080	40962346	+	0.0666667	NA	intron (NM_001258419, intron 1 of 6)	MLT1D|LTR|ERVL-MaLR	497423	NM_020929	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
10.3333	chr13	38195106	38195314	+	0.0666667	NA	Intergenic	Intergenic	-51978	NR_047500	100874188	Hs.569249	NR_047500	ENSG00000223685	LINC00571	-	long intergenic non-protein coding RNA 571	ncRNA
34.8333-3	chr13	51791073	51791990	+	0.0666667	NA	intron (NM_001031719, intron 2 of 7)	L1ME4b|LINE|L1	12631	NM_024705	79758	Hs.266728	NM_024705	ENSG00000102796	DHRS12	SDR40C1	dehydrogenase/reductase 12	protein-coding
18.6667-7	chr15	68735454	68735808	+	0.0666667	NA	Intergenic	LTR85a|LTR|Gypsy?	66294	NR_036197	100422971		NR_036197	ENSG00000265195	MIR4312	-	microRNA 4312	ncRNA
14.7667-5	chrX	97877530	97877832	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	-313146	NR_125391	10824	Hs.654372	NR_125391	ENSG00000236256	DIAPH2-AS1	EPAG	DIAPH2 antisense RNA 1	ncRNA
18.2333-2	chr1	216536859	216537258	+	0.0666667	NA	intron (NM_001243518, intron 6 of 7)	L2a|LINE|L2	-113610	NM_206933	7399	Hs.655974	NM_007123	ENSG00000042781	USH2A	RP39|US2|USH2|dJ1111A8.1	usherin	protein-coding
13.7667-3	chr3	62963040	62963401	+	0.0666667	NA	Intergenic	L2b|LINE|L2	-87804	NM_183393	8618	Hs.654933	NM_003716	ENSG00000163618	CADPS	CADPS1|CAPS|CAPS1|UNC-31	calcium dependent secretion activator	protein-coding
12.4-5	chr2	211710099	211710401	+	0.0666667	NA	intron (NM_001042599, intron 9 of 26)	intron (NM_001042599, intron 9 of 26)	716110	NR_031643	100313771		NR_031643	ENSG00000221782	MIR548F2	MIR548F-2|MIRN548F2|hsa-mir-548f-2	microRNA 548f-2	ncRNA
23.1-17	chr7	39890604	39890962	+	0.0666667	NA	Intergenic	Intergenic	58636	NR_158201	112267983	Hs.587424	NR_158201		LOC112267983	-	uncharacterized LOC112267983	ncRNA
15.3667-11	chr8	120155874	120156268	+	0.0666667	NA	intron (NM_021110, intron 2 of 47)	intron (NM_021110, intron 2 of 47)	30969	NM_021110	7373	Hs.409662	NM_021110	ENSG00000187955	COL14A1	UND	collagen type XIV alpha 1 chain	protein-coding
15.6333-2	chr10	58562700	58563130	+	0.0666667	NA	intron (NM_001080512, intron 1 of 20)	L1M2|LINE|L1	50043	NM_001080512	80114	Hs.100261	NM_001080512	ENSG00000122870	BICC1	BICC|CYSRD	BicC family RNA binding protein 1	protein-coding
16.0333-12	chr3	183204224	183204664	+	0.0666667	NA	intron (NM_015078, intron 25 of 29)	L1MB7|LINE|L1	-41710	NM_014398	27074	Hs.518448	NM_014398	ENSG00000078081	LAMP3	CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403	lysosomal associated membrane protein 3	protein-coding
16.1-7	chr2	150671347	150671667	+	0.0666667	NA	Intergenic	L1M2|LINE|L1	42610	NR_110247	101929282	Hs.126866	NR_110244	ENSG00000224048	LINC02612	-	long intergenic non-protein coding RNA 2612	ncRNA
24.3-9	chr3	77175173	77175764	+	0.0666667	NA	intron (NM_001290039, intron 2 of 26)	L2|LINE|L2	77456	NM_001128929	6092	Hs.13305	NM_002942	ENSG00000185008	ROBO2	SAX3	roundabout guidance receptor 2	protein-coding
14.8333-10	chr2	165477609	165477951	+	0.0666667	NA	intron (NM_001172173, intron 1 of 6)	AluSz|SINE|Alu	8082	NM_001172173	80034	Hs.470479	NM_024969	ENSG00000178662	CSRNP3	FAM130A2|PPP1R73|TAIP-2|TAIP2	cysteine and serine rich nuclear protein 3	protein-coding
13.0667-7	chr4	65214191	65214387	+	0.0666667	NA	Intergenic	Intergenic	-209789	NR_033976	401134	Hs.165899	NR_033976	ENSG00000250125	LINC02232	-	long intergenic non-protein coding RNA 2232	ncRNA
20.3333-6	chr11	18959168	18959680	+	0.0666667	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	-24422	NM_147199	259249	Hs.711459	NM_147199	ENSG00000170255	MRGPRX1	GPCR|MGRG2|MRGX1|SNSR4	MAS related GPR family member X1	protein-coding
23.3667-11	chr3	50205731	50206269	+	0.0666667	NA	intron (NM_006841, intron 1 of 15)	CpG	729	NM_006841	10991	Hs.76460	NM_006841	ENSG00000188338	SLC38A3	G17|NAT1|SN1|SNAT3	solute carrier family 38 member 3	protein-coding
22.3667-6	chr3	58182770	58183286	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-12393	NR_135534	105377105	Hs.613914	NR_135534	ENSG00000244161	FLNB-AS1	-	FLNB antisense RNA 1	ncRNA
14.4-9	chr16	79973127	79973377	+	0.0666667	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	178003	NR_104661	101928248	Hs.659802	NR_104660	ENSG00000260876	LINC01229	-	long intergenic non-protein coding RNA 1229	ncRNA
23.9-2	chr11	29359647	29360199	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-234490	NR_149107	105376606	Hs.577275	NR_149106	ENSG00000255117	LINC02546	-	long intergenic non-protein coding RNA 2546	ncRNA
23.8-8	chr20	44782467	44782946	+	0.0666667	NA	intron (NM_001205317, intron 1 of 5)	intron (NM_001205317, intron 1 of 5)	27840	NM_182970	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding
18.8-6	chr2	26322106	26322436	+	0.0666667	NA	intron (NR_135916, intron 1 of 12)	AluSg|SINE|Alu	-3169	NM_001145169	165082	Hs.631878	NM_153835	ENSG00000173567	ADGRF3	GPR113|PGR23	adhesion G protein-coupled receptor F3	protein-coding
21.6333-4	chr12	23133967	23134472	+	0.0666667	NA	Intergenic	Intergenic	-41417	NR_120471	101928441	Hs.129111	NR_120471	ENSG00000256321	LOC101928441	-	uncharacterized LOC101928441	ncRNA
36.8333-7	chr7	30452175	30453195	+	0.0666667	NA	non-coding (NR_149002, exon 6 of 15)	non-coding (NR_149002, exon 6 of 15)	26099	NM_006092	10392	Hs.405153	NM_006092	ENSG00000106100	NOD1	CARD4|CLR7.1|NLRC1	nucleotide binding oligomerization domain containing 1	protein-coding
22.5-5	chr3	43134848	43135431	+	0.0666667	NA	Intergenic	Intergenic	-29060	NM_032806	84892	Hs.745002	NM_032806	ENSG00000144647	POMGNT2	AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8	protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)	protein-coding
17.0667-6	chr17	50932325	50932717	+	0.0666667	NA	Intergenic	Intergenic	-64543	NM_001243877	10140	Hs.703321	NM_005749	ENSG00000141232	TOB1	APRO5|APRO6|PIG49|TOB|TROB|TROB1	transducer of ERBB2, 1	protein-coding
21.3667-11	chr8	25151082	25151587	+	0.0666667	NA	Intergenic	Intergenic	-33355	NM_024940	80005	Hs.195403	NM_024940	ENSG00000147459	DOCK5	-	dedicator of cytokinesis 5	protein-coding
6.43333-2	chr8	13040301	13040424	+	0.0666667	NA	Intergenic	Intergenic	28098	NM_001099677	57604	Hs.202521	NM_020844	ENSG00000250305	TRMT9B	C8orf79|KIAA1456|TRM9L|hTRM9L	tRNA methyltransferase 9B (putative)	protein-coding
5.23333	chr2	175052069	175052198	+	0.0666667	NA	Intergenic	MER115|DNA|hAT-Tip100	-46754	NM_001025201	1123	Hs.380138	NM_001822	ENSG00000128656	CHN1	ARHGAP2|CHN|DURS2|NC|RHOGAP2	chimerin 1	protein-coding
19.0333-15	chr7	112910485	112910995	+	0.0666667	NA	intron (NM_152556, intron 2 of 4)	L1MC5a|LINE|L1	29135	NM_152556	154743	Hs.489734	NM_152556	ENSG00000164603	BMT2	C7orf60|SAMTOR	base methyltransferase of 25S rRNA 2 homolog	protein-coding
19-20	chr6	130990918	130991459	+	0.0666667	NA	intron (NM_001135554, intron 1 of 14)	intron (NM_001135554, intron 1 of 14)	9579	NM_001252660	2037	Hs.486470	NM_001431	ENSG00000079819	EPB41L2	4.1-G|4.1G	erythrocyte membrane protein band 4.1 like 2	protein-coding
21-2	chr14	73785139	73785583	+	0.0666667	NA	intron (NM_001043318, intron 1 of 11)	intron (NM_001043318, intron 1 of 11)	1847	NM_001043318	91748	Hs.594157	NM_194278	ENSG00000156030	ELMSAN1	C14orf117|C14orf43|LSR68|MIDEAS|c14_5541	ELM2 and Myb/SANT domain containing 1	protein-coding
17-11	chr8	78970962	78971412	+	0.0666667	NA	Intergenic	L2|LINE|L2	133658	NR_157588	112935892		NR_157588		LINC02605	-	long intergenic non-protein coding RNA 2605	ncRNA
22.1333-17	chr8	85544631	85545009	+	0.0666667	NA	Intergenic	Intergenic	-79905	NR_121630	100996348	Hs.606624	NR_121630	ENSG00000253549	CA3-AS1	-	CA3 antisense RNA 1	ncRNA
21.9667-3	chr12	120944495	120944825	+	0.0666667	NA	Intergenic	Intergenic	27632	NR_024345	283460	Hs.612351	NR_024345	ENSG00000241388	HNF1A-AS1	C12orf27|HAS1|NCRNA00262	HNF1A antisense RNA 1	ncRNA
11.5-6	chr19	28307954	28308254	+	0.0666667	NA	Intergenic	Intergenic	-298584	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA
7	chr7	130434265	130434371	+	0.0666667	NA	intron (NR_046443, intron 1 of 10)	intron (NR_046443, intron 1 of 10)	6698	NR_046443	95681	Hs.368315	NM_018718	ENSG00000106477	CEP41	JBTS15|TSGA14	centrosomal protein 41	protein-coding
13.8333-5	chr21	22747002	22747348	+	0.0666667	NA	Intergenic	L1MA4|LINE|L1	-332109	NR_106746	102466967		NR_106746	ENSG00000275469	MIR6130	hsa-mir-6130	microRNA 6130	ncRNA
8.1-3	chr5	3278139	3278324	+	0.0666667	NA	Intergenic	Intergenic	100396	NR_104617	102467074	Hs.575250	NR_104617	ENSG00000249808	LINC01377	-	long intergenic non-protein coding RNA 1377	ncRNA
15.5333-8	chr21	15387284	15387682	+	0.0666667	NA	Intergenic	L1MA7|LINE|L1	-322483	NM_003489	8204	Hs.155017	NM_003489	ENSG00000180530	NRIP1	CAKUT3|RIP140	nuclear receptor interacting protein 1	protein-coding
2.96667	chr2	117494844	117494888	+	0.0666667	NA	Intergenic	L2b|LINE|L2	-319825	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
16.1667-7	chr14	46977613	46977985	+	0.0666667	NA	intron (NM_001113498, intron 8 of 16)	intron (NM_001113498, intron 8 of 16)	-326018	NM_080746	140801	Hs.308332	NM_080746	ENSG00000165496	RPL10L	RPL10_5_1358	ribosomal protein L10 like	protein-coding
20.1333-13	chr3	45678197	45678719	+	0.0666667	NA	non-coding (NR_033947, exon 3 of 3)	non-coding (NR_033947, exon 3 of 3)	10424	NR_033947	644714	Hs.712889	NR_033947		LIMD1-AS1	-	LIMD1 antisense RNA 1	ncRNA
15.9-3	chr1	67741582	67741840	+	0.0666667	NA	intron (NM_018841, intron 2 of 3)	intron (NM_018841, intron 2 of 3)	56510	NM_001199741	1647	Hs.80409	NM_001924	ENSG00000116717	GADD45A	DDIT1|GADD45	growth arrest and DNA damage inducible alpha	protein-coding
16.2667-2	chr17	14167932	14168302	+	0.0666667	NA	intron (NM_001303, intron 5 of 6)	THE1D-int|LTR|ERVL-MaLR	68745	NM_001007530	146822	Hs.447556	NM_001007530	ENSG00000223510	CDRT15	-	CMT1A duplicated region transcript 15	protein-coding
19.8333-6	chr14	77490191	77490639	+	0.0666667	NA	intron (NM_199296, intron 1 of 6)	MIR|SINE|MIR	8401	NM_182509	145501	Hs.29742	NM_182509	ENSG00000100593	ISM2	TAIL1|THSD3	isthmin 2	protein-coding
16.3333-10	chr2	201710367	201710737	+	0.0666667	NA	intron (NM_020919, intron 26 of 33)	intron (NM_020919, intron 26 of 33)	-11908	NM_033066	58538	Hs.63085	NM_033066	ENSG00000082126	MPP4	ALS2CR5|DLG6	membrane palmitoylated protein 4	protein-coding
24.3-15	chr5	111614749	111615167	+	0.0666667	NA	intron (NR_040093, intron 1 of 6)	L1PA16|LINE|L1	-102361	NM_001308061	134429	Hs.93842	NM_139164	ENSG00000164211	STARD4	-	StAR related lipid transfer domain containing 4	protein-coding
13.1333-5	chr17	19468877	19469241	+	0.0666667	NA	Intergenic	MIR3|SINE|MIR	57827	NM_007148	7732	Hs.189482	NM_007148	ENSG00000128482	RNF112	BFP|ZNF179	ring finger protein 112	protein-coding
12.4333-13	chr5	52362132	52362386	+	0.0666667	NA	Intergenic	Intergenic	354228	NR_147166	105378960	Hs.639310	NR_147166	ENSG00000248789	LINC02118	-	long intergenic non-protein coding RNA 2118	ncRNA
15.4333-4	chr12	92398652	92398914	+	0.0666667	NA	Intergenic	Intergenic	-22748	NR_027932	574028	Hs.730377	NM_001025233	ENSG00000257127	CLLU1	-	chronic lymphocytic leukemia up-regulated 1	ncRNA
22.0667-9	chr5	155353524	155353979	+	0.0666667	NA	Intergenic	AluSc8|SINE|Alu	339996	NM_001099293	285643	Hs.567824	NM_001099293	ENSG00000226650	KIF4B	-	kinesin family member 4B	protein-coding
28.5-6	chr2	198916585	198917083	+	0.0666667	NA	Intergenic	Intergenic	541105	NM_001172509	23314	Hs.516617	NM_015265	ENSG00000119042	SATB2	GLSS	SATB homeobox 2	protein-coding
21.3333-7	chr5	81825123	81825632	+	0.0666667	NA	Intergenic	Intergenic	-74124	NM_001256734	23635	Hs.102735	NM_012446	ENSG00000145687	SSBP2	HSPC116|SOSS-B2	single stranded DNA binding protein 2	protein-coding
9.86666-2	chr8	43735382	43735610	+	0.0666667	NA	Intergenic	ALR/Alpha|Satellite|centr	443054	NM_001005365	340441	Hs.531579	NM_001002920	ENSG00000188877	POTEA	A26A1|CT104.3|POTE-8|POTE8	POTE ankyrin domain family member A	protein-coding
25.2667-9	chr2	103058108	103058518	+	0.0666667	NA	Intergenic	Intergenic	-73884	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
8.56667-3	chr4	49633908	49634038	+	0.0666667	NA	Intergenic	(GAATG)n|Satellite|Satellite	647331	NM_001286791	80157	Hs.479703	NM_025087	ENSG00000109182	CWH43	CWH43-C|PGAP2IP	cell wall biogenesis 43 C-terminal homolog	protein-coding
16.0333-11	chr3	79921503	79921860	+	0.0666667	NA	Intergenic	Intergenic	-153683	NM_002941	6091	Hs.744218	NM_002941	ENSG00000169855	ROBO1	DUTT1|SAX3	roundabout guidance receptor 1	protein-coding
18.2333-7	chr3	113469411	113469804	+	0.0666667	NA	intron (NM_001331078, intron 7 of 17)	intron (NM_001331078, intron 7 of 17)	-28093	NM_018338	55779	Hs.584936	NM_018338	ENSG00000206530	CFAP44	SPGF20|WDR52	cilia and flagella associated protein 44	protein-coding
16.6-11	chr5	29331892	29332152	+	0.0666667	NA	Intergenic	(ATTAG)n|Simple_repeat|Simple_repeat	63954	NR_104628	101929681	Hs.549659	NR_104628		LINC02064	-	long intergenic non-protein coding RNA 2064	ncRNA
15.9-4	chr10	41858947	41859370	+	0.0666667	NA	Intergenic	(ATGGA)n|Simple_repeat|Simple_repeat	508887	NR_024380	441666	Hs.255729	NR_024380	ENSG00000215146	LOC441666	-	zinc finger protein 91 pseudogene	pseudo
21.3-18	chr6	64775723	64776281	+	0.0666667	NA	intron (NM_001292009, intron 22 of 43)	intron (NM_001292009, intron 22 of 43)	-525416	NM_001271675	441155	Hs.546686	NM_001271675		LOC441155	-	zinc finger CCCH-type domain-containing-like	protein-coding
14.4-2	chr1	44661080	44661393	+	0.0666667	NA	intron (NM_001300748, intron 1 of 2)	intron (NM_001300748, intron 1 of 2)	9820	NR_145816	109623472		NR_145816		SNORD145	-	small nucleolar RNA, C/D box 145	snoRNA
10.3667-2	chr10	28347676	28347936	+	0.0666667	NA	Intergenic	MER63C|DNA|hAT-Blackjack	-44742	NR_134517	143098	Hs.499159	NM_173496	ENSG00000150054	MPP7	-	membrane palmitoylated protein 7	protein-coding
17.5667-5	chr18	63773021	63773515	+	0.0666667	NA	intron (NM_001040147, intron 1 of 7)	intron (NM_001040147, intron 1 of 7)	-2107	NM_001261831	8710	Hs.138202	NM_003784	ENSG00000166396	SERPINB7	MEGSIN|PPKN|TP55	serpin family B member 7	protein-coding
16.3667-8	chr5	105448769	105449055	+	0.0666667	NA	Intergenic	MER74C|LTR|ERVL	349438	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
24.4667-4	chr14	67530769	67531361	+	0.0666667	NA	intron (NM_001348546, intron 1 of 2)	intron (NM_001348546, intron 1 of 2)	-2225	NM_020715	57475	Hs.594236	NM_020715	ENSG00000054690	PLEKHH1	-	pleckstrin homology, MyTH4 and FERM domain containing H1	protein-coding
6.76667	chr1	241480994	241481131	+	0.0666667	NA	Intergenic	L2c|LINE|L2	38723	NM_000143	2271	Hs.592490	NM_000143	ENSG00000091483	FH	FMRD|HLRCC|HsFH|LRCC|MCL|MCUL1	fumarate hydratase	protein-coding
24.4-16	chr2	86639987	86640424	+	0.0666667	NA	intron (NM_001198954, intron 2 of 7)	L1ME1|LINE|L1	-16328	NM_001198951	7844	Hs.469199	NM_005667	ENSG00000239305	RNF103	HKF-1|KF-1|KF1|ZFP-103|ZFP103	ring finger protein 103	protein-coding
8.03333-4	chr5	136981689	136981860	+	0.0666667	NA	intron (NM_004598, intron 9 of 10)	intron (NM_004598, intron 9 of 10)	-146423	NR_134246	105379192	Hs.124611	NR_134246		LOC105379192	-	uncharacterized LOC105379192	ncRNA
14.4-6	chr14	46590748	46591084	+	0.0666667	NA	Intergenic	L1M5|LINE|L1	60865	NM_080746	140801	Hs.308332	NM_080746	ENSG00000165496	RPL10L	RPL10_5_1358	ribosomal protein L10 like	protein-coding
18.8333-5	chr14	64694213	64694714	+	0.0666667	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-9961	NM_001308147	26030	Hs.509637	NM_015549	ENSG00000126822	PLEKHG3	ARHGEF43|KIAA0599	pleckstrin homology and RhoGEF domain containing G3	protein-coding
17.7667-9	chr7	89498232	89498683	+	0.0666667	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-620943	NR_003551	442523	Hs.406964	NR_003551	ENSG00000235436	DPY19L2P4	-	DPY19L2 pseudogene 4	pseudo
13.9333-12	chr9	79558294	79558630	+	0.0666667	NA	Intergenic	Intergenic	-13311	NM_001351562	7091	Hs.444213	NM_007005	ENSG00000106829	TLE4	BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4	TLE family member 4, transcriptional corepressor	protein-coding
29.6-9	chr18	60701423	60702082	+	0.0666667	NA	Intergenic	Intergenic	-328977	NM_005912	4160	Hs.532833	NM_005912	ENSG00000166603	MC4R	BMIQ20	melanocortin 4 receptor	protein-coding
19.0667-9	chr7	22872004	22872316	+	0.0666667	NA	Intergenic	MER91C|DNA|hAT-Tip100	15547	NR_003075	692210		NR_003075	ENSG00000221740	SNORD93	HBII-336	small nucleolar RNA, C/D box 93	snoRNA
19-23	chr8	140341565	140342013	+	0.0666667	NA	intron (NM_001160372, intron 9 of 22)	intron (NM_001160372, intron 9 of 22)	115955	NM_001160372	83696	Hs.654911	NM_031466	ENSG00000167632	TRAPPC9	IBP|IKBKBBP|MRT13|NIBP|T1|TRS120	trafficking protein particle complex 9	protein-coding
16.2-5	chr10	83211753	83212156	+	0.0666667	NA	Intergenic	MLT2B2|LTR|ERVL	465135	NR_134317	105378397	Hs.147725	NR_134317		LINC02650	-	long intergenic non-protein coding RNA 2650	ncRNA
10.9667-4	chr4	77682874	77683195	+	0.0666667	NA	Intergenic	Intergenic	136030	NM_001365007	246175	Hs.592519	NM_144571	ENSG00000138767	CNOT6L	CCR4b	CCR4-NOT transcription complex subunit 6 like	protein-coding
26.2667-7	chr8	126763983	126764417	+	0.0666667	NA	Intergenic	L2a|LINE|L2	-205722	NM_174911	157638	Hs.124951	NM_174911	ENSG00000168672	LRATD2	BCMP101|FAM84B|NSE2	LRAT domain containing 2	protein-coding
21.3-7	chr16	14255135	14255687	+	0.0666667	NA	intron (NM_001308142, intron 15 of 16)	L1MEf|LINE|L1	-46877	NR_132983	100129781	Hs.190748	NR_132983		MIR193BHG	-	MIR193B host gene	ncRNA
9.7	chr11	114180346	114180518	+	0.0666667	NA	intron (NM_001354752, intron 2 of 4)	intron (NM_001354752, intron 2 of 4)	-115381	NM_006169	4837	Hs.503911	NM_006169	ENSG00000166741	NNMT	-	nicotinamide N-methyltransferase	protein-coding
19.9-13	chr3	157410723	157411176	+	0.0666667	NA	intron (NM_024621, intron 6 of 13)	MLT1J|LTR|ERVL-MaLR	-25901	NM_002852	5806	Hs.591286	NM_002852	ENSG00000163661	PTX3	TNFAIP5|TSG-14	pentraxin 3	protein-coding
7.26667-4	chr8	100691024	100691175	+	0.0666667	NA	Intergenic	L1ME3|LINE|L1	11925	NR_106992	102466854		NR_106992	ENSG00000284570	MIR7705	hsa-mir-7705	microRNA 7705	ncRNA
6.86666-2	chr5	30457242	30457407	+	0.0666667	NA	Intergenic	HERV16-int|LTR|ERVL	576764	NR_134264	105374704	Hs.151157	NR_134264		LOC105374704	-	uncharacterized LOC105374704	ncRNA
15.9-7	chr2	44210150	44210493	+	0.0666667	NA	intron (NM_177969, intron 2 of 4)	AluJb|SINE|Alu	41446	NM_001033557	5495	Hs.416769	NM_002706	ENSG00000138032	PPM1B	PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX	protein phosphatase, Mg2+/Mn2+ dependent 1B	protein-coding
21.9	chr1	44950460	44950993	+	0.0666667	NA	intron (NM_001166588, intron 3 of 9)	AluSz6|SINE|Alu	35869	NM_020365	8891	Hs.533549	NM_020365	ENSG00000070785	EIF2B3	EIF-2B|EIF2Bgamma	eukaryotic translation initiation factor 2B subunit gamma	protein-coding
16.2667-14	chr9	80275897	80276380	+	0.0666667	NA	Intergenic	Intergenic	301115	NR_121212	101927477	Hs.571630	NR_121212		LINC01507	XLOC_000303	long intergenic non-protein coding RNA 1507	ncRNA
15.1333-4	chr12	42183034	42183337	+	0.0666667	NA	intron (NR_135139, intron 4 of 6)	Tigger1|DNA|TcMar-Tigger	-38311	NM_173601	283464	Hs.259347	NM_173601	ENSG00000151233	GXYLT1	GLT8D3	glucoside xylosyltransferase 1	protein-coding
18.6333-11	chr20	42348542	42349071	+	0.0666667	NA	intron (NM_133170, intron 11 of 31)	intron (NM_133170, intron 11 of 31)	-336677	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA
16.9333	chr1	173568649	173569008	+	0.0666667	NA	intron (NM_178527, intron 9 of 27)	L1MA2|LINE|L1	34244	NM_178527	284525	Hs.494981	NM_178527	ENSG00000162753	SLC9C2	SLC9A11	solute carrier family 9 member C2 (putative)	protein-coding
22.3-12	chrX	99906047	99906509	+	0.0666667	NA	Intergenic	Intergenic	503995	NM_020766	57526	Hs.4993	NM_020766	ENSG00000165194	PCDH19	EFMR|EIEE9	protocadherin 19	protein-coding
35.7-2	chr12	24258107	24258824	+	0.0666667	NA	intron (NM_001261414, intron 4 of 16)	intron (NM_001261414, intron 4 of 16)	35194	NR_120473	101928471	Hs.569156	NR_120472	ENSG00000256120	SOX5-AS1	-	SOX5 antisense RNA 1	ncRNA
11.8-6	chr2	154059289	154059466	+	0.0666667	NA	intron (NM_052917, intron 3 of 12)	intron (NM_052917, intron 3 of 12)	114983	NM_001301627	114805	Hs.470277	NM_052917	ENSG00000144278	GALNT13	GalNAc-T13	polypeptide N-acetylgalactosaminyltransferase 13	protein-coding
19.1-9	chr2	181925681	181926240	+	0.0666667	NA	intron (NM_006751, intron 16 of 16)	intron (NM_006751, intron 16 of 16)	-28281	NR_048567	151242	Hs.10941	NM_001080545	ENSG00000150722	PPP1R1C	IPP5	protein phosphatase 1 regulatory inhibitor subunit 1C	protein-coding
7.9	chr2	32134629	32134775	+	0.0666667	NA	intron (NM_001363875, intron 8 of 15)	AluSx|SINE|Alu	-31139	NM_001193515	55676	Hs.23248	NM_017964	ENSG00000152683	SLC30A6	MST103|MSTP103|ZNT6	solute carrier family 30 member 6	protein-coding
10.4-6	chr18	65443876	65444061	+	0.0666667	NA	Intergenic	Intergenic	-306284	NM_033646	1005	Hs.541003	NM_004361	ENSG00000081138	CDH7	CDH7L1	cadherin 7	protein-coding
27.9667-2	chr1	233614252	233614776	+	0.0666667	NA	exon (NM_002245, exon 1 of 3)	exon (NM_002245, exon 1 of 3)	408	NM_002245	3775	Hs.208544	NM_002245	ENSG00000135750	KCNK1	DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1	potassium two pore domain channel subfamily K member 1	protein-coding
7.8-3	chr8	104855480	104855619	+	0.0666667	NA	Intergenic	L2|LINE|L2	-266525	NM_001135703	29967	Hs.600630	NM_013437	ENSG00000147650	LRP12	MIG13A|ST7	LDL receptor related protein 12	protein-coding
20.9333-11	chr2	191209835	191210307	+	0.0666667	NA	Intergenic	L1MEf|LINE|L1	-35333	NM_012223	4430	Hs.439620	NM_012223	ENSG00000128641	MYO1B	MMI-alpha|MMIa|MYH-1c|myr1	myosin IB	protein-coding
18.8667-4	chr12	121867605	121868147	+	0.0666667	NA	intron (NM_001171993, intron 1 of 15)	AluJb|SINE|Alu	-9017	NM_002150	3242	Hs.2899	NM_002150	ENSG00000158104	HPD	4-HPPD|4HPPD|GLOD3|HPPDASE|PPD	4-hydroxyphenylpyruvate dioxygenase	protein-coding
15.1333-11	chr4	187136344	187136771	+	0.0666667	NA	Intergenic	MLT1F|LTR|ERVL-MaLR	-65429	NR_147159	105377600	Hs.641158	NR_147159		LINC02374	-	long intergenic non-protein coding RNA 2374	ncRNA
14.9667-9	chr5	164884479	164884825	+	0.0666667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	414373	NR_105065	102546299	Hs.437730	NR_105065	ENSG00000241956	LOC102546299	-	uncharacterized LOC102546299	ncRNA
28.1333-11	chr7	43747111	43747650	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-11293	NM_001253823	644	Hs.488143	NM_000712	ENSG00000106605	BLVRA	BLVR|BVR|BVRA	biliverdin reductase A	protein-coding
7.93333-3	chr12	102479539	102479681	+	0.0666667	NA	intron (NM_000618, intron 1 of 3)	intron (NM_000618, intron 1 of 3)	953	NM_001111285	3479	Hs.160562	NM_000618	ENSG00000017427	IGF1	IGF|IGF-I|IGFI|MGF	insulin like growth factor 1	protein-coding
20.5-8	chr21	28917780	28918276	+	0.0666667	NA	Intergenic	Intergenic	-32655	NM_182749	29104	Hs.163846	NM_013240	ENSG00000156239	N6AMT1	C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P	N-6 adenine-specific DNA methyltransferase 1	protein-coding
15.4667-6	chr12	91989042	91989424	+	0.0666667	NA	intron (NR_132341, intron 2 of 4)	MER58A|DNA|hAT-Charlie	152480	NR_046159	256021	Hs.651357	NM_001256373	ENSG00000257242	LINC01619	C12orf79	long intergenic non-protein coding RNA 1619	ncRNA
20.0667-9	chr3	11619713	11620202	+	0.0666667	NA	intron (NM_014667, intron 2 of 5)	intron (NM_014667, intron 2 of 5)	-15376	NM_001284391	9686	Hs.740389	NM_014667	ENSG00000144560	VGLL4	VGL-4	vestigial like family member 4	protein-coding
8.49999-2	chr5	46169598	46169822	+	0.0666667	NA	Intergenic	ALR/Alpha|Satellite|centr	-473330	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
7.8-2	chr5	30887678	30887849	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-305923	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
11.2667-2	chr14	84930483	84930711	+	0.0666667	NA	Intergenic	Intergenic	-341335	NR_145983	26843		NR_145983		SNORD3P3	RNU3P3|U3|U3.5|u3.7	small nucleolar RNA, C/D box 3 pseudogene 3	snoRNA
14.4-11	chr5	20649841	20650191	+	0.0666667	NA	intron (NR_149120, intron 1 of 11)	L1PA8A|LINE|L1	-34481	NR_147185	105374677		NR_147185		LINC02146	-	long intergenic non-protein coding RNA 2146	ncRNA
13.7333-8	chr8	84734829	84735036	+	0.0666667	NA	intron (NM_001287244, intron 1 of 7)	intron (NM_001287244, intron 1 of 7)	29005	NM_001287244	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
14.1333-4	chr12	53689409	53689644	+	0.0666667	NA	Intergenic	Intergenic	-13196	NM_001002031	517	Hs.524464	NM_005176	ENSG00000135390	ATP5MC2	ATP5A|ATP5G2	ATP synthase membrane subunit c locus 2	protein-coding
13.4333	chr12	121632865	121633227	+	0.0666667	NA	intron (NM_032790, intron 2 of 2)	intron (NM_032790, intron 2 of 2)	6496	NM_032790	84876	Hs.55148	NM_032790		ORAI1	CRACM1|IMD9|ORAT1|TAM2|TMEM142A	ORAI calcium release-activated calcium modulator 1	protein-coding
13.8333-7	chr7	25383780	25384173	+	0.0666667	NA	Intergenic	Intergenic	-155490	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding
35.3667-2	chr14	60160978	60161572	+	0.0666667	NA	intron (NM_001322280, intron 1 of 6)	intron (NM_001322280, intron 1 of 6)	4123	NM_016029	51635	Hs.59719	NM_016029	ENSG00000100612	DHRS7	CGI-86|SDR34C1|retDSR4|retSDR4	dehydrogenase/reductase 7	protein-coding
10.7333-6	chr3	31156835	31157079	+	0.0666667	NA	Intergenic	L2b|LINE|L2	4830	NR_130459	100423038		NR_130459	ENSG00000265376	MIR466	hsa-mir-466	microRNA 466	ncRNA
35.4667-7	chr17	54006037	54006662	+	0.0666667	NA	Intergenic	Intergenic	183422	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
20.7666-5	chr6	37964309	37964916	+	0.0666667	NA	intron (NM_021943, intron 2 of 5)	intron (NM_021943, intron 2 of 5)	144885	NM_021943	60685	Hs.36959	NM_021943	ENSG00000156639	ZFAND3	TEX27	zinc finger AN1-type containing 3	protein-coding
12.5-3	chr19	47643407	47643650	+	0.0666667	NA	intron (NM_015711, intron 1 of 14)	intron (NM_015711, intron 1 of 14)	35332	NM_015711	29998	Hs.97244	NM_015711	ENSG00000063169	BICRA	GLTSCR1	BRD4 interacting chromatin remodeling complex associated protein	protein-coding
19.3333-15	chr5	129417666	129418061	+	0.0666667	NA	Intergenic	L1MA7|LINE|L1	-20716	NR_039665	100616325		NR_039665	ENSG00000265691	MIR4460	-	microRNA 4460	ncRNA
8.36666-2	chr2	88307167	88307402	+	0.0666667	NA	Intergenic	MIR3|SINE|MIR	134145	NM_018271	55258	Hs.739080	NM_018271	ENSG00000144115	THNSL2	SOFAT|THS2|TSH2	threonine synthase like 2	protein-coding
23.3667-2	chr1	208824220	208824668	+	0.0666667	NA	Intergenic	Intergenic	95756	NR_146914	105372893	Hs.568720	NR_146914	ENSG00000232812	LINC01717	-	long intergenic non-protein coding RNA 1717	ncRNA
22.8666-10	chr6	167005743	167006395	+	0.0666667	NA	intron (NM_001278690, intron 5 of 10)	MIR|SINE|MIR	6672	NM_007045	11116	Hs.487175	NM_007045	ENSG00000213066	FGFR1OP	FOP	FGFR1 oncogene partner	protein-coding
22.9667	chr1	178967357	178967790	+	0.0666667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-58231	NM_001324310	9917	Hs.5737	NM_014864	ENSG00000116199	FAM20B	gxk1	FAM20B glycosaminoglycan xylosylkinase	protein-coding
3.43333	chr8	3675756	3675808	+	0.0666667	NA	intron (NM_033225, intron 7 of 69)	MLT1A|LTR|ERVL-MaLR	-947331	NR_125426	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA
19.8-3	chr15	80153803	80154327	+	0.0666667	NA	intron (NM_000137, intron 1 of 13)	intron (NM_000137, intron 1 of 13)	1066	NM_000137	2184	Hs.73875	NM_000137	ENSG00000103876	FAH	-	fumarylacetoacetate hydrolase	protein-coding
21.6-7	chr2	188310178	188310739	+	0.0666667	NA	intron (NR_045563, intron 2 of 12)	L2|LINE|L2	12966	NR_030287	693146		NR_030287	ENSG00000207951	MIR561	MIRN561|hsa-mir-561|mir-561	microRNA 561	ncRNA
18.9-10	chr22	46231971	46232418	+	0.0666667	NA	exon (NM_005036, exon 8 of 9)	exon (NM_005036, exon 8 of 9)	18099	NM_207327	150383	Hs.103110	NM_207327	ENSG00000205643	CDPF1	C22orf40	cysteine rich DPF motif domain containing 1	protein-coding
22.6333-5	chr12	57072275	57072808	+	0.0666667	NA	intron (NM_001130963, intron 2 of 8)	intron (NM_001130963, intron 2 of 8)	6250	NM_015257	23306	Hs.591040	NM_015257	ENSG00000166881	NEMP1	TMEM194|TMEM194A	nuclear envelope integral membrane protein 1	protein-coding
30.8-16	chr8	125731583	125732242	+	0.0666667	NA	Intergenic	Intergenic	219285	NR_038447	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA
12.7333-6	chr2	146624171	146624455	+	0.0666667	NA	Intergenic	Intergenic	37256	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
14.9667-10	chr6	161094545	161094792	+	0.0666667	NA	intron (NM_005922, intron 15 of 26)	intron (NM_005922, intron 15 of 26)	67314	NR_024277	79992	Hs.664873	NM_024929	ENSG00000279355	AGPAT4-IT1	C6orf59|NCRNA00241	AGPAT4 intronic transcript 1	ncRNA
21.7667-8	chr6	46153087	46153532	+	0.0666667	NA	Intergenic	L1MD1|LINE|L1	17671	NM_001290072	59084	Hs.35198	NM_021572	ENSG00000112796	ENPP5	NPP-5|NPP5	ectonucleotide pyrophosphatase/phosphodiesterase family member 5	protein-coding
10.5333-2	chr17	11942277	11942480	+	0.0666667	NA	exon (NM_004662, exon 13 of 15)	exon (NM_004662, exon 13 of 15)	54994	NM_144680	7566	Hs.370473	NM_144680	ENSG00000154957	ZNF18	HDSG1|KOX11|ZKSCAN6|ZNF535|ZSCAN38|Zfp535	zinc finger protein 18	protein-coding
17.1-14	chr21	34296746	34297226	+	0.0666667	NA	Intergenic	MER20B|DNA|hAT-Charlie	-67038	NM_172201	9992	Hs.551521	NM_172201	ENSG00000159197	KCNE2	ATFB4|LQT5|LQT6|MIRP1	potassium voltage-gated channel subfamily E regulatory subunit 2	protein-coding
18.1667-12	chr7	128856637	128857124	+	0.0666667	NA	exon (NM_001458, exon 45 of 48)	exon (NM_001458, exon 45 of 48)	5746	NR_149055	110806300	Hs.735929	NR_149055	ENSG00000242902	FLNC-AS1	-	FLNC antisense RNA 1	ncRNA
18.9333-6	chr18	35368514	35368929	+	0.0666667	NA	3' UTR (NM_001322286, exon 4 of 4)	3' UTR (NM_001322286, exon 4 of 4)	8616	NM_145756	252884	Hs.351005	NM_145756	ENSG00000186496	ZNF396	ZSCAN14	zinc finger protein 396	protein-coding
5.99999	chr20	9301054	9301227	+	0.0666667	NA	intron (NM_182797, intron 1 of 35)	MLT1D|LTR|ERVL-MaLR	-6660	NM_000933	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding
20.2-6	chr2	211177571	211178074	+	0.0666667	NA	Intergenic	Intergenic	560251	NR_002763	29034	Hs.658398	NR_002763	ENSG00000280837	CPS1-IT1	CPS1-IT|CPS1IT|CPS1IT1|PRO0132	CPS1 intronic transcript 1	ncRNA
15.8667-3	chr14	69610059	69610386	+	0.0666667	NA	Intergenic	Intergenic	-1374	NM_014734	9766	Hs.440025	NM_014734	ENSG00000100647	SUSD6	DRAGO|KIAA0247	sushi domain containing 6	protein-coding
14.9667-7	chr3	182425116	182425515	+	0.0666667	NA	Intergenic	Intergenic	61047	NR_040105	401103	Hs.591304	NR_040105	ENSG00000241098	LINC01994	-	long intergenic non-protein coding RNA 1994	ncRNA
10.4-9	chr3	54457894	54458164	+	0.0666667	NA	intron (NM_018398, intron 4 of 37)	L1MA5|LINE|L1	181828	NR_027122	790952	Hs.720658	NR_027122	ENSG00000265992	ESRG	HESRG	embryonic stem cell related	ncRNA
10.7333-5	chr15	58641953	58642163	+	0.0666667	NA	intron (NM_001320570, intron 6 of 14)	intron (NM_001320570, intron 6 of 14)	51549	NR_073415	664618	Hs.670224	NR_002927		HSP90AB4P	HSP90Bd	heat shock protein 90 alpha family class B member 4, pseudogene	pseudo
20.1667-7	chr20	12565412	12565838	+	0.0666667	NA	Intergenic	MIRc|SINE|MIR	371338	NR_109872	102606466	Hs.602196	NR_109872		LOC102606466	-	uncharacterized LOC102606466	ncRNA
23.6-13	chr22	41515710	41516356	+	0.0666667	NA	intron (NM_001098, intron 6 of 17)	intron (NM_001098, intron 6 of 17)	28437	NM_001018050	171568	Hs.712617	NM_138338	ENSG00000100413	POLR3H	RPC22.9|RPC8	RNA polymerase III subunit H	protein-coding
21.6	chr10	108592405	108592790	+	0.0666667	NA	Intergenic	AluSc|SINE|Alu	-523304	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
19.3333-3	chr12	59594399	59594831	+	0.0666667	NA	Intergenic	Intergenic	-1414	NM_001270623	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
24.1-3	chr18	67283931	67284520	+	0.0666667	NA	Intergenic	L1MC4|LINE|L1	202641	NR_049809	100847002		NR_049809	ENSG00000263354	MIR5011	-	microRNA 5011	ncRNA
29.1666	chr10	112753193	112753955	+	0.0666667	NA	TTS (NM_001365714)	TTS (NM_001365714)	-69922	NR_120684	103344931	Hs.458447	NR_120684	ENSG00000260917	LOC103344931	-	uncharacterized LOC103344931	ncRNA
9.1-2	chr2	206916097	206916300	+	0.0666667	NA	Intergenic	L1ME2|LINE|L1	-23320	NM_173077	130749	Hs.684103	NM_173077	ENSG00000144410	CPO	-	carboxypeptidase O	protein-coding
24.4333-8	chr8	118963004	118963684	+	0.0666667	NA	intron (NM_001324095, intron 1 of 7)	intron (NM_001324095, intron 1 of 7)	11081	NM_001324095	10584	Hs.176615	NM_006438	ENSG00000184374	COLEC10	3MC3|CL-34|CLL1	collectin subfamily member 10	protein-coding
21.4333-5	chr12	56639975	56640424	+	0.0666667	NA	intron (NM_001686, intron 7 of 9)	intron (NM_001686, intron 7 of 9)	3555	NR_003046	692090		NR_003046		SNORD59B	U59B	small nucleolar RNA, C/D box 59B	snoRNA
12.7-10	chr8	132236659	132236975	+	0.0666667	NA	intron (NM_004519, intron 1 of 14)	MLT1E3|LTR|ERVL-MaLR	-131552	NM_001145095	10086	Hs.285026	NM_005712	ENSG00000132297	HHLA1	PLA2L	HERV-H LTR-associating 1	protein-coding
7.5	chr1	219686413	219686571	+	0.0666667	NA	Intergenic	Intergenic	-73347	NM_001355457	643136	Hs.647764	NM_001085394	ENSG00000215817	ZC3H11B	ZC3HDC11B	zinc finger CCCH-type containing 11B	protein-coding
12-7	chr7	20892189	20892482	+	0.0666667	NA	intron (NR_126381, intron 2 of 5)	MER3|DNA|hAT-Charlie	56904	NR_126381	104355138	Hs.650722	NR_126381	ENSG00000232790	LINC01162	-	long intergenic non-protein coding RNA 1162	ncRNA
3.63334-2	chr8	142644111	142644165	+	0.0666667	NA	Intergenic	MER4-int|LTR|ERV1	5542	NR_134305	101928087	Hs.126101	NR_134305	ENSG00000277332	LOC101928087	-	uncharacterized LOC101928087	ncRNA
23.4333-5	chr14	42729279	42729888	+	0.0666667	NA	Intergenic	Intergenic	1122727	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
24.9333-6	chr8	138551965	138552521	+	0.0666667	NA	Intergenic	THE1D|LTR|ERVL-MaLR	-54513	NM_001362965	51059	Hs.126024	NM_015912	ENSG00000147724	FAM135B	C8ORFK32	family with sequence similarity 135 member B	protein-coding
17.2-13	chr8	81695604	81696008	+	0.0666667	NA	promoter-TSS (NM_001010893)	promoter-TSS (NM_001010893)	-748	NM_001010893	347051	Hs.683849	NM_001010893	ENSG00000253598	SLC10A5	P5	solute carrier family 10 member 5	protein-coding
32.5333-2	chr11	133558268	133558824	+	0.0666667	NA	Intergenic	Intergenic	-26045	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding
6.96667	chr19	42217179	42217286	+	0.0666667	NA	intron (NM_001270614, intron 1 of 4)	CpG-14593	445	NR_073051	162989	Hs.515432	NM_133328	ENSG00000160570	DEDD2	FLAME-3|FLAME3	death effector domain containing 2	protein-coding
12.7333-3	chr10	53014229	53014603	+	0.0666667	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-242716	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
5.56667-2	chr4	52370915	52371012	+	0.0666667	NA	Intergenic	Intergenic	285576	NM_001134223	64854	Hs.7966	NM_022832	ENSG00000109189	USP46	-	ubiquitin specific peptidase 46	protein-coding
23.3333-12	chr7	20079339	20080004	+	0.0666667	NA	intron (NR_110114, intron 1 of 5)	intron (NR_110114, intron 1 of 5)	60755	NR_110114	101927668	Hs.715900	NR_110114		LOC101927668	-	uncharacterized LOC101927668	ncRNA
14.9333-4	chr10	84809419	84809845	+	0.0666667	NA	Intergenic	HUERS-P1-int|LTR|ERV1	384463	NM_001284242	54462	Hs.461988	NM_018999	ENSG00000107771	CCSER2	FAM190B|Gcap14|KIAA1128|bA486O22.1	coiled-coil serine rich protein 2	protein-coding
15.8-8	chr2	223323710	223323953	+	0.0666667	NA	Intergenic	Intergenic	271901	NM_080671	23704	Hs.348522	NM_080671	ENSG00000152049	KCNE4	MIRP3	potassium voltage-gated channel subfamily E regulatory subunit 4	protein-coding
20.8-11	chr4	40342591	40342999	+	0.0666667	NA	intron (NM_017581, intron 3 of 4)	intron (NM_017581, intron 3 of 4)	7462	NM_017581	55584	Hs.272278	NM_017581	ENSG00000174343	CHRNA9	HSA243342|NACHRA9	cholinergic receptor nicotinic alpha 9 subunit	protein-coding
17.1-7	chr14	54365034	54365472	+	0.0666667	NA	Intergenic	Intergenic	-31615	NM_001330173	1033	Hs.84113	NM_005192	ENSG00000100526	CDKN3	CDI1|CIP2|KAP|KAP1	cyclin dependent kinase inhibitor 3	protein-coding
18.1667-5	chr14	54526749	54527037	+	0.0666667	NA	intron (NM_006568, intron 2 of 5)	intron (NM_006568, intron 2 of 5)	16987	NM_006568	10668	Hs.59106	NM_006568	ENSG00000100532	CGRRF1	CGR19|RNF197	cell growth regulator with ring finger domain 1	protein-coding
28.4-15	chr8	99858326	99859172	+	0.0666667	NA	intron (NM_017890, intron 56 of 61)	intron (NM_017890, intron 56 of 61)	34958	NM_004374	1345	Hs.351875	NM_004374	ENSG00000164919	COX6C	-	cytochrome c oxidase subunit 6C	protein-coding
18.7667-5	chr11	96975822	96976296	+	0.0666667	NA	Intergenic	Intergenic	467634	NR_135097	105369443	Hs.599377	NR_135097	ENSG00000256684	LINC02737	-	long intergenic non-protein coding RNA 2737	ncRNA
28.1-7	chr5	25949000	25949548	+	0.0666667	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	758321	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
16.0333-17	chr9	121699750	121700194	+	0.0666667	NA	intron (NM_032552, intron 3 of 16)	intron (NM_032552, intron 3 of 16)	-42813	NM_138709	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding
12.0333-4	chr4	104663446	104663750	+	0.0666667	NA	intron (NR_125926, intron 6 of 9)	MLT1A|LTR|ERVL-MaLR	-168704	NR_132741	80319	Hs.12248	NM_025212	ENSG00000168772	CXXC4	IDAX	CXXC finger protein 4	protein-coding
15.4667-16	chr5	73467491	73467788	+	0.0666667	NA	intron (NR_126410, intron 2 of 4)	AluJb|SINE|Alu	5327	NR_126410	104355294	Hs.127927	NR_126410	ENSG00000251324	LINC01386	-	long intergenic non-protein coding RNA 1386	ncRNA
18-20	chr9	102309368	102309795	+	0.0666667	NA	Intergenic	L1PA16|LINE|L1	-210056	NR_103830	414319	Hs.385790	NR_103830	ENSG00000204250	LINC00587	C9orf107|bA785H23.1	long intergenic non-protein coding RNA 587	ncRNA
13.9333	chr1	53777836	53778160	+	0.0666667	NA	intron (NR_033142, intron 15 of 16)	intron (NR_033142, intron 15 of 16)	-38834	NM_001367484	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding
17.2333-5	chr20	12056606	12057104	+	0.0666667	NA	Intergenic	Intergenic	138962	NM_014962	22903	Hs.709366	NM_014962	ENSG00000132640	BTBD3	dJ742J24.1	BTB domain containing 3	protein-coding
20.9667-11	chr3	72160551	72161084	+	0.0666667	NA	intron (NR_038221, intron 2 of 2)	MIRb|SINE|MIR	9560	NR_038221	201617	Hs.382623	NR_038221	ENSG00000243083	LINC00870	-	long intergenic non-protein coding RNA 870	ncRNA
17.9667-10	chr7	117810474	117810946	+	0.0666667	NA	intron (NM_001363351, intron 3 of 22)	intron (NM_001363351, intron 3 of 22)	61510	NM_001363350	83992	Hs.592285	NM_033427	ENSG00000077063	CTTNBP2	C7orf8|CORTBP2|Orf4	cortactin binding protein 2	protein-coding
18.8333-3	chr1	225960429	225960818	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-19131	NM_001172425	7044	Hs.520187	NM_003240	ENSG00000143768	LEFTY2	EBAF|LEFTA|LEFTYA|TGFB4	left-right determination factor 2	protein-coding
17-12	chr9	122187367	122187795	+	0.0666667	NA	intron (NM_001286828, intron 3 of 3)	intron (NM_001286828, intron 3 of 3)	27673	NM_198469	254956	Hs.71428	NM_198469	ENSG00000185681	MORN5	C9orf113|C9orf18	MORN repeat containing 5	protein-coding
11.3-7	chr6	86711976	86712200	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-225440	NM_000865	3354	Hs.1611	NM_000865	ENSG00000168830	HTR1E	5-HT1E	5-hydroxytryptamine receptor 1E	protein-coding
5.3-2	chr9	26759312	26759442	+	0.0666667	NA	Intergenic	Intergenic	133425	NM_024828	79886	Hs.178357	NM_024828	ENSG00000120159	CAAP1	C9orf82|CAAP	caspase activity and apoptosis inhibitor 1	protein-coding
5.2-3	chr4	129380427	129380535	+	0.0666667	NA	Intergenic	LTR78B|LTR|ERV1	284329	NM_001099783	132321	Hs.567679	NM_173487	ENSG00000151470	C4orf33	-	chromosome 4 open reading frame 33	protein-coding
31.1-2	chr1	49488870	49489336	+	0.0666667	NA	intron (NR_136623, intron 2 of 12)	L1MA3|LINE|L1	-17018	NR_046839	100874313	Hs.551277	NR_046839	ENSG00000225623	AGBL4-IT1	-	AGBL4 intronic transcript 1	ncRNA
21.0667-3	chr13	102515717	102516285	+	0.0666667	NA	Intergenic	Intergenic	-80985	NR_160411	7174	Hs.432424	NM_003291	ENSG00000134900	TPP2	TPP-2|TPP-II|TPPII	tripeptidyl peptidase 2	protein-coding
22.2333-10	chr2	51802816	51803201	+	0.0666667	NA	intron (NR_135237, intron 6 of 10)	intron (NR_135237, intron 6 of 10)	-567640	NR_135239	105374596		NR_135239	ENSG00000225444	LINC01867	-	long intergenic non-protein coding RNA 1867	ncRNA
15.3667-4	chr11	74395995	74396347	+	0.0666667	NA	intron (NM_173582, intron 1 of 13)	AluJr|SINE|Alu	2262	NM_173582	283209	Hs.26612	NM_173582	ENSG00000165434	PGM2L1	BM32A|PMMLP	phosphoglucomutase 2 like 1	protein-coding
7.63333-2	chr2	170097911	170098108	+	0.0666667	NA	Intergenic	Intergenic	-80138	NM_001083615	140469	Hs.671900	NM_138995	ENSG00000071909	MYO3B	-	myosin IIIB	protein-coding
10.8-2	chr11	102171116	102171355	+	0.0666667	NA	intron (NM_001282097, intron 3 of 7)	intron (NM_001282097, intron 3 of 7)	58787	NM_001195045	10413	Hs.503692	NM_006106	ENSG00000137693	YAP1	COB1|YAP|YAP2|YAP65|YKI	Yes associated protein 1	protein-coding
16.6667-15	chr7	101256957	101257352	+	0.0666667	NA	Intergenic	Intergenic	-12073	NM_016068	51024	Hs.423968	NM_016068	ENSG00000214253	FIS1	CGI-135|TTC11	fission, mitochondrial 1	protein-coding
25.6333-2	chr11	111395376	111395931	+	0.0666667	NA	Intergenic	Charlie15b|DNA|hAT-Charlie	-16378	NM_006235	5450	Hs.654525	NM_006235	ENSG00000110777	POU2AF1	BOB1|OBF-1|OBF1|OCAB	POU class 2 homeobox associating factor 1	protein-coding
28.5333-4	chr14	83788391	83788890	+	0.0666667	NA	Intergenic	Intergenic	1146008	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
31.3-13	chr8	133031319	133031873	+	0.0666667	NA	intron (NM_003235, intron 41 of 47)	intron (NM_003235, intron 41 of 47)	14985	NR_107002	102466865		NR_107002	ENSG00000276961	MIR7848	hsa-mir-7848	microRNA 7848	ncRNA
14.3-2	chr1	98615156	98615569	+	0.0666667	NA	Intergenic	Intergenic	-46359	NM_015976	51375	Hs.197015	NM_015976	ENSG00000162627	SNX7	-	sorting nexin 7	protein-coding
22.9333-2	chr1	230158527	230159195	+	0.0666667	NA	intron (NM_004481, intron 1 of 15)	intron (NM_004481, intron 1 of 15)	91623	NM_004481	2590	Hs.743964	NM_004481	ENSG00000143641	GALNT2	GalNAc-T2	polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
23.0333-13	chr8	107677605	107678207	+	0.0666667	NA	Intergenic	AluSg|SINE|Alu	-179988	NM_001146	284	Hs.369675	NM_001146	ENSG00000154188	ANGPT1	AGP1|AGPT|ANG1	angiopoietin 1	protein-coding
22.5667-7	chr5	174637526	174638031	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-86804	NM_002449	4488	Hs.89404	NM_002449	ENSG00000120149	MSX2	CRS2|FPP|HOX8|MSH|PFM|PFM1	msh homeobox 2	protein-coding
17.7667-3	chr11	56883215	56883730	+	0.0666667	NA	Intergenic	Intergenic	34994	NR_110137	101927120	Hs.472675	NR_110136	ENSG00000255433	LINC02735	-	long intergenic non-protein coding RNA 2735	ncRNA
20.3333-2	chr10	7341849	7342339	+	0.0666667	NA	intron (NM_001029880, intron 4 of 20)	(A)n|Simple_repeat|Simple_repeat	67247	NM_001018039	57713	Hs.407983	NM_001018039	ENSG00000198879	SFMBT2	-	Scm like with four mbt domains 2	protein-coding
15.7667-6	chr20	38886739	38887159	+	0.0666667	NA	intron (NM_015568, intron 2 of 10)	L2c|LINE|L2	-39468	NM_030919	81610	Hs.726442	NM_030919	ENSG00000101447	FAM83D	C20orf129|CHICA|dJ616B8.3	family with sequence similarity 83 member D	protein-coding
26.2333-3	chr1	224200552	224201160	+	0.0666667	NA	Intergenic	AluSq2|SINE|Alu	12423	NR_110669	101927143	Hs.638720	NR_110669	ENSG00000232628	LOC101927143	-	uncharacterized LOC101927143	ncRNA
9.36667-4	chr2	37328482	37328664	+	0.0666667	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-11489	NM_005813	23683	Hs.660757	NM_005813	ENSG00000115825	PRKD3	EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU	protein kinase D3	protein-coding
19.9667-7	chr21	17414238	17414581	+	0.0666667	NA	Intergenic	Intergenic	-24481	NR_037586	100505929	Hs.46707	NM_001005521	ENSG00000232560	LINC01549	C21orf37	long intergenic non-protein coding RNA 1549	ncRNA
12.8333-10	chr4	45193482	45193777	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-466995	NR_073095	132789	Hs.21398	NM_138335	ENSG00000163281	GNPDA2	GNP2|SB52	glucosamine-6-phosphate deaminase 2	protein-coding
18.6333	chr1	33521765	33522269	+	0.0666667	NA	intron (NM_052896, intron 66 of 69)	intron (NM_052896, intron 66 of 69)	49372	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding
20.2-5	chr16	83890476	83890913	+	0.0666667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-8421	NM_012213	23417	Hs.644610	NM_012213	ENSG00000103150	MLYCD	MCD	malonyl-CoA decarboxylase	protein-coding
9.3-4	chr11	40872626	40872827	+	0.0666667	NA	intron (NM_020929, intron 1 of 4)	intron (NM_020929, intron 1 of 4)	-579596	NR_047673	57689	Hs.745123	NM_020929	ENSG00000148948	LRRC4C	NGL-1|NGL1	leucine rich repeat containing 4C	protein-coding
9.3-2	chr11	21354315	21354454	+	0.0666667	NA	intron (NM_201551, intron 14 of 18)	intron (NM_201551, intron 14 of 18)	684798	NM_006157	4745	Hs.657172	NM_006157	ENSG00000165973	NELL1	IDH3GL|NRP1	neural EGFL like 1	protein-coding
9.13333-4	chr7	149229259	149229479	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-10282	NM_012256	7988	Hs.490510	NM_012256	ENSG00000170260	ZNF212	C2H2-150|ZNF182|ZNFC150	zinc finger protein 212	protein-coding
18.1333-19	chr9	36999638	37000176	+	0.0666667	NA	intron (NM_001280554, intron 4 of 8)	intron (NM_001280554, intron 4 of 8)	34361	NM_001280556	5079	Hs.654464	NM_016734	ENSG00000196092	PAX5	ALL3|BSAP	paired box 5	protein-coding
24.9333	chr17	61466108	61466562	+	0.0666667	NA	intron (NM_001321120, intron 4 of 8)	intron (NM_001321120, intron 4 of 8)	9847	NM_018488	9496	Hs.143907	NM_018488	ENSG00000121075	TBX4	ICPPS|SPS	T-box transcription factor 4	protein-coding
13.5-5	chr17	57995240	57995499	+	0.0666667	NA	Intergenic	Intergenic	-7115	NM_007146	7716	Hs.463569	NM_007146	ENSG00000136451	VEZF1	DB1|ZNF161	vascular endothelial zinc finger 1	protein-coding
28.5667-12	chr5	126578305	126578986	+	0.0666667	NA	intron (NM_001202404, intron 5 of 15)	AluJo|SINE|Alu	16574	NM_001182	501	Hs.483239	NM_001182	ENSG00000164904	ALDH7A1	ATQ1|EPD|PDE	aldehyde dehydrogenase 7 family member A1	protein-coding
26.5667-8	chr5	157470098	157470670	+	0.0666667	NA	intron (NM_001099287, intron 4 of 5)	L3|LINE|CR1	-10284	NR_136204	102724404	Hs.570889	NR_136204		LOC102724404	-	uncharacterized LOC102724404	ncRNA
28.0667-5	chr2	17556871	17557436	+	0.0666667	NA	intron (NM_001366806, intron 1 of 3)	MIRb|SINE|MIR	16457	NM_003385	7447	Hs.444212	NM_003385	ENSG00000163032	VSNL1	HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1	visinin like 1	protein-coding
27.6333-7	chr4	99345989	99346580	+	0.0666667	NA	intron (NR_133005, intron 3 of 8)	(TAA)n|Simple_repeat|Simple_repeat	6462	NR_133005	126	Hs.654537	NM_000669	ENSG00000248144	ADH1C	ADH3	alcohol dehydrogenase 1C (class I), gamma polypeptide	protein-coding
21.1667-3	chr10	114108751	114109272	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	65145	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding
21.2333	chr1	102865102	102865420	+	0.0666667	NA	Intergenic	LTR8A|LTR|ERV1	243235	NM_080629	1301	Hs.523446	NM_001854	ENSG00000060718	COL11A1	CO11A1|COLL6|STL2	collagen type XI alpha 1 chain	protein-coding
17.2333-11	chr7	52324079	52324467	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	-711360	NM_182595	285877	Hs.381970	NM_182595	ENSG00000221900	POM121L12	-	POM121 transmembrane nucleoporin like 12	protein-coding
20.4-12	chr5	120790876	120791292	+	0.0666667	NA	Intergenic	Intergenic	259620	NM_001308088	51334	Hs.157461	NM_016644	ENSG00000184838	PRR16	DSC54|LARGEN	proline rich 16	protein-coding
16.2-10	chr3	519521	519786	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-72452	NR_110118	101927215	Hs.650700	NR_110118	ENSG00000224957	LINC01266	-	long intergenic non-protein coding RNA 1266	ncRNA
17.9-13	chr7	6532597	6532966	+	0.0666667	NA	intron (NM_001145118, intron 2 of 21)	intron (NM_001145118, intron 2 of 21)	18655	NM_001145118	392862	Hs.512174	NM_001145118	ENSG00000215045	GRID2IP	DELPHILIN	Grid2 interacting protein	protein-coding
31.6333-7	chr3	45713019	45713683	+	0.0666667	NA	intron (NM_001319071, intron 6 of 19)	intron (NM_001319071, intron 6 of 19)	23955	NM_001319072	22908	Hs.156509	NM_014016	ENSG00000211456	SACM1L	SAC1	SAC1 like phosphatidylinositide phosphatase	protein-coding
27.8333-3	chr2	198679979	198680437	+	0.0666667	NA	Intergenic	L1MB1|LINE|L1	-305111	NR_110267	101927619	Hs.632942	NR_110267		LINC01923	-	long intergenic non-protein coding RNA 1923	ncRNA
12.4-4	chr12	48316264	48316450	+	0.0666667	NA	Intergenic	MER58D|DNA|hAT-Charlie	-12623	NM_181788	341567	Hs.155833	NM_181788	ENSG00000187166	H1FNT	H1.7|H1T2	H1 histone family member N, testis specific	protein-coding
10.6333-6	chr5	72708987	72709218	+	0.0666667	NA	Intergenic	MER52A|LTR|ERV1	-48433	NR_105007	102477328	Hs.254516	NR_105007	ENSG00000248371	LINC02056	-	long intergenic non-protein coding RNA 2056	ncRNA
19.8333-3	chr10	66148408	66148854	+	0.0666667	NA	intron (NM_001127384, intron 13 of 17)	MLT1A1|LTR|ERVL-MaLR	577206	NR_120647	101928913	Hs.568857	NR_120647		LINC01515	-	long intergenic non-protein coding RNA 1515	ncRNA
20.4667-5	chr2	3929423	3929927	+	0.0666667	NA	Intergenic	Intergenic	44357	NR_037881	100505964	Hs.190267	NR_037881	ENSG00000237401	LINC01304	-	long intergenic non-protein coding RNA 1304	ncRNA
15.4-20	chr6	62612413	62612795	+	0.0666667	NA	Intergenic	MER50-int|LTR|ERV1	-326377	NR_146870	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
18.6-8	chr15	33574506	33574951	+	0.0666667	NA	intron (NM_001243996, intron 12 of 102)	intron (NM_001243996, intron 12 of 102)	263761	NM_001243996	6263	Hs.709373	NM_001036	ENSG00000198838	RYR3	RYR-3	ryanodine receptor 3	protein-coding
12.1-12	chr8	30019354	30019535	+	0.0666667	NA	Intergenic	Intergenic	-62096	NR_036104	100422876		NR_036104	ENSG00000264788	MIR3148	mir-3148	microRNA 3148	ncRNA
15.0667-3	chr10	54650511	54650852	+	0.0666667	NA	intron (NR_134503, intron 4 of 5)	THE1B|LTR|ERVL-MaLR	-42724	NR_031642	100302192		NR_031642	ENSG00000221594	MIR548F1	MIR548F-1|MIRN548F1|hsa-mir-548f-1	microRNA 548f-1	ncRNA
17.2-7	chr4	100533164	100533663	+	0.0666667	NA	Intergenic	Arthur1B|DNA|hAT-Tip100	-15391	NM_001159694	51705	Hs.152913	NM_016242	ENSG00000164035	EMCN	EMCN2|MUC14	endomucin	protein-coding
26.2333-5	chr12	32661613	32662271	+	0.0666667	NA	Intergenic	Intergenic	-17258	NM_001278463	10059	Hs.556296	NM_005690	ENSG00000087470	DNM1L	DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5	dynamin 1 like	protein-coding
16.6-9	chr4	56263596	56263845	+	0.0666667	NA	intron (NM_020722, intron 2 of 10)	intron (NM_020722, intron 2 of 10)	93525	NM_020722	57482	Hs.596667	NM_020722	ENSG00000109265	KIAA1211	CRAD	KIAA1211	protein-coding
22.4667-6	chr20	33495727	33496211	+	0.0666667	NA	intron (NM_001032999, intron 1 of 10)	intron (NM_001032999, intron 1 of 10)	5873	NM_001032999	9139	Hs.153934	NM_005093	ENSG00000078699	CBFA2T2	EHT|MTGR1|ZMYND3|p85	CBFA2/RUNX1 partner transcriptional co-repressor 2	protein-coding
12.9333	chr1	153436414	153436750	+	0.0666667	NA	Intergenic	Intergenic	-13999	NM_001319198	6279	Hs.416073	NM_002964	ENSG00000143546	S100A8	60B8AG|CAGA|CFAG|CGLA|CP-10|L1Ag|MA387|MIF|MRP8|NIF|P8	S100 calcium binding protein A8	protein-coding
17-5	chr3	88658746	88659171	+	0.0666667	NA	Intergenic	L1ME3G|LINE|L1	320502	NM_001368165	111064647		NM_001368165		CSNKA2IP	-	casein kinase 2 subunit alpha' interacting protein	protein-coding
11.8-5	chr2	107744278	107744491	+	0.0666667	NA	Intergenic	Intergenic	-9728	NR_126370	104326057	Hs.585967	NR_126369	ENSG00000232991	GACAT1	LINC00876	gastric cancer associated transcript 1	ncRNA
17.0333-2	chr13	109358778	109359167	+	0.0666667	NA	Intergenic	Intergenic	-41724	NR_126361	104326054	Hs.569298	NR_126361	ENSG00000229792	LINC00399	TCONS_00021596	long intergenic non-protein coding RNA 399	ncRNA
26.8-5	chr17	4905161	4905750	+	0.0666667	NA	Intergenic	AluJo|SINE|Alu	-2357	NM_000080	1145	Hs.654535	NM_000080	ENSG00000108556	CHRNE	ACHRE|CMS1D|CMS1E|CMS2A|CMS4A|CMS4B|CMS4C|FCCMS|SCCMS	cholinergic receptor nicotinic epsilon subunit	protein-coding
8.56666	chr8	122000114	122000311	+	0.0666667	NA	Intergenic	Intergenic	-358772	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
12.6667-11	chr9	125857535	125857849	+	0.0666667	NA	intron (NR_024122, intron 2 of 7)	intron (NR_024122, intron 2 of 7)	109509	NM_001134778	5090	Hs.428027	NM_006195	ENSG00000167081	PBX3	-	PBX homeobox 3	protein-coding
13.5333-17	chr5	42845754	42846090	+	0.0666667	NA	Intergenic	L1PA4|LINE|L1	-33846	NM_001093726	6414	Hs.275775	NM_005410	ENSG00000250722	SELENOP	SELP|SEPP|SEPP1|SeP	selenoprotein P	protein-coding
31.7666-5	chrX	115940941	115941745	+	0.0666667	NA	intron (NR_130730, intron 2 of 2)	intron (NR_130730, intron 2 of 2)	27768	NR_132337	642776	Hs.634316	NR_130730	ENSG00000235244	DANT2	-	DXZ4 associated non-coding transcript 2, distal	ncRNA
20.5333-11	chr4	6256280	6256787	+	0.0666667	NA	Intergenic	Intergenic	-13317	NM_001145853	7466	Hs.518602	NM_006005	ENSG00000109501	WFS1	CTRCT41|WFRS|WFS|WFSL	wolframin ER transmembrane glycoprotein	protein-coding
20.6667-16	chr8	125211850	125212376	+	0.0666667	NA	intron (NM_001349486, intron 5 of 7)	intron (NM_001349486, intron 5 of 7)	120253	NM_173685	286053	Hs.388297	NM_173685	ENSG00000156831	NSMCE2	C8orf36|MMS21|NSE2|ZMIZ7	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase	protein-coding
21.6-5	chr16	10925830	10926271	+	0.0666667	NA	non-coding (NR_104444, exon 18 of 18)	non-coding (NR_104444, exon 18 of 18)	16418	NM_014015	28955	Hs.592051	NM_014015	ENSG00000182108	DEXI	MYLE	Dexi homolog	protein-coding
16.3667-3	chr2	107984831	107985308	+	0.0666667	NA	Intergenic	Intergenic	-1455	NM_001305007	60482	Hs.287758	NM_021815	ENSG00000115665	SLC5A7	CHT|CHT1|CMS20|HMN7A	solute carrier family 5 member 7	protein-coding
11.4-7	chr3	94362755	94362974	+	0.0666667	NA	Intergenic	Intergenic	299803	NM_022072	63899	Hs.436594	NM_022072	ENSG00000178694	NSUN3	MST077|MSTP077	NOP2/Sun RNA methyltransferase 3	protein-coding
24.1666	chr14	26333695	26334387	+	0.0666667	NA	Intergenic	Intergenic	219389	NM_001366398	4857	Hs.31588	NM_002515	ENSG00000139910	NOVA1	Nova-1	NOVA alternative splicing regulator 1	protein-coding
34.6333-4	chr5	44870666	44871380	+	0.0666667	NA	Intergenic	Intergenic	62076	NM_016640	10884	Hs.124165	NM_016640	ENSG00000112996	MRPS30	MRP-S30|PAP|PDCD9|S30mt	mitochondrial ribosomal protein S30	protein-coding
22.6333-12	chr2	176126921	176127563	+	0.0666667	NA	Intergenic	Intergenic	-2463	NM_001199747	3234	Hs.301963	NM_019558	ENSG00000175879	HOXD8	HOX4|HOX4E|HOX5.4	homeobox D8	protein-coding
23.7333-2	chr10	70585640	70586169	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	16837	NM_001083116	5551	Hs.2200	NM_005041	ENSG00000180644	PRF1	HPLH2|P1|PFP	perforin 1	protein-coding
18.5333-11	chr18	71577857	71578380	+	0.0666667	NA	intron (NR_038326, intron 1 of 4)	L1MC3|LINE|L1	838	NR_038325	100505776	Hs.202072	NR_038325	ENSG00000260676	LINC01541	UTAT39	long intergenic non-protein coding RNA 1541	ncRNA
19.6333-8	chr22	29040942	29041427	+	0.0666667	NA	intron (NM_001206998, intron 2 of 8)	AluJo|SINE|Alu	-9708	NR_046851	100874123	Hs.674708	NR_046851	ENSG00000177993	ZNRF3-AS1	-	ZNRF3 antisense RNA 1	ncRNA
13.9333-7	chr2	162484455	162484829	+	0.0666667	NA	intron (NM_033272, intron 6 of 15)	MSTB1|LTR|ERVL-MaLR	140274	NM_001330270	25801	Hs.377894	NM_012198	ENSG00000115271	GCA	GCL	grancalcin	protein-coding
21.8667-10	chr9	135603235	135603564	+	0.0666667	NA	Intergenic	Intergenic	28474	NR_034017	100130954	Hs.550769	NR_034016	ENSG00000237339	LINC01502	-	long intergenic non-protein coding RNA 1502	ncRNA
15.2333	chr10	41860274	41860709	+	0.0666667	NA	Intergenic	(ATGGA)n|Simple_repeat|Simple_repeat	507554	NR_024380	441666	Hs.255729	NR_024380	ENSG00000215146	LOC441666	-	zinc finger protein 91 pseudogene	pseudo
6.46667-3	chr2	48174566	48174663	+	0.0666667	NA	Intergenic	Intergenic	-140068	NM_002158	3344	Hs.468478	NM_002158	ENSG00000170802	FOXN2	HTLF	forkhead box N2	protein-coding
22.1-7	chr3	9484024	9484548	+	0.0666667	NA	Intergenic	L1MC2|LINE|L1	69536	NM_198560	375323	Hs.56782	NM_198560	ENSG00000156959	LHFPL4	GARLH4	LHFPL tetraspan subfamily member 4	protein-coding
7.2-3	chr3	169863905	169864013	+	0.0666667	NA	intron (NM_024727, intron 1 of 8)	MIRb|SINE|MIR	5976	NM_001277128	79782	Hs.411295	NM_024727	ENSG00000114248	LRRC31	HEL-S-293	leucine rich repeat containing 31	protein-coding
10.7333-3	chr11	104268071	104268232	+	0.0666667	NA	Intergenic	L1PA7|LINE|L1	-104004	NM_033135	80310	Hs.352298	NM_025208	ENSG00000170962	PDGFD	IEGF|MSTP036|SCDGF-B|SCDGFB	platelet derived growth factor D	protein-coding
17.8667-2	chr11	27885115	27885548	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-163301	NM_170731	627	Hs.502182	NM_001709	ENSG00000176697	BDNF	ANON2|BULN2	brain derived neurotrophic factor	protein-coding
13.8	chr11	114245761	114246004	+	0.0666667	NA	intron (NM_006006, intron 5 of 6)	intron (NM_006006, intron 5 of 6)	-49931	NM_006169	4837	Hs.503911	NM_006169	ENSG00000166741	NNMT	-	nicotinamide N-methyltransferase	protein-coding
7.26667	chr10	109319861	109320010	+	0.0666667	NA	Intergenic	L1MD1|LINE|L1	603311	NM_001324136	7511	Hs.390623	NM_020383	ENSG00000108039	XPNPEP1	APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1	X-prolyl aminopeptidase 1	protein-coding
27.2333-5	chr21	34609942	34610454	+	0.0666667	NA	intron (NM_004414, intron 1 of 3)	intron (NM_004414, intron 1 of 3)	3645	NM_001285389	1827	Hs.282326	NM_004414	ENSG00000159200	RCAN1	ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1	regulator of calcineurin 1	protein-coding
14.2333-15	chr7	132931416	132931747	+	0.0666667	NA	intron (NM_001317177, intron 4 of 8)	intron (NM_001317177, intron 4 of 8)	103334	NR_037427	100500804		NR_037427	ENSG00000284135	MIR3654	-	microRNA 3654	ncRNA
19.6667-3	chr22	31956110	31956589	+	0.0666667	NA	exon (NM_003405, exon 2 of 2)	exon (NM_003405, exon 2 of 2)	-10987	NM_015372	25775	Hs.627602	NM_015372	ENSG00000128254	C22orf24	HSN44A4A	chromosome 22 open reading frame 24	protein-coding
14.9333-17	chr5	38999272	38999665	+	0.0666667	NA	intron (NM_001285439, intron 5 of 38)	L1MEg|LINE|L1	74931	NM_001285439	253260	Hs.407926	NM_152756	ENSG00000164327	RICTOR	AVO3|PIA|hAVO3	RPTOR independent companion of MTOR complex 2	protein-coding
16.2667	chr12	109461971	109462353	+	0.0666667	NA	intron (NR_133898, intron 1 of 5)	intron (NR_133898, intron 1 of 5)	15138	NM_001317395	83892	Hs.524731	NM_031954	ENSG00000110906	KCTD10	BTBD28|MSTP028|ULRO61|hBACURD3	potassium channel tetramerization domain containing 10	protein-coding
15-5	chr2	55292003	55292385	+	0.0666667	NA	intron (NM_001254943, intron 32 of 33)	intron (NM_001254943, intron 32 of 33)	9875	NR_027258	344405	Hs.445292	NM_001080459	ENSG00000162997	PRORSD1P	NCRNA00117|PRDXDD1P|Prdxdd1|Ybakd1	prolyl-tRNA synthetase associated domain containing 1, pseudogene	pseudo
14.9333-12	chr20	50025017	50025395	+	0.0666667	NA	Intergenic	L1MB5|LINE|L1	16423	NR_051976	100887755	Hs.195705	NR_051976		TRERNA1	LINC00651|treRNA	translation regulatory long non-coding RNA 1	ncRNA
16.9667-3	chr12	52988463	52988789	+	0.0666667	NA	Intergenic	MLT1A|LTR|ERVL-MaLR	-17830	NM_001417	1975	Hs.648394	NM_001417	ENSG00000063046	EIF4B	EIF-4B|PRO1843	eukaryotic translation initiation factor 4B	protein-coding
25.3667-3	chr3	4875044	4875471	+	0.0666667	NA	Intergenic	X6A_LINE|LINE|CR1	31244	NR_125914	100507582	Hs.434505	NR_037903	ENSG00000235831	BHLHE40-AS1	-	BHLHE40 antisense RNA 1	ncRNA
26.0333-13	chr9	134937550	134938285	+	0.0666667	NA	Intergenic	Intergenic	-20005	NM_002003	2219	Hs.440898	NM_002003	ENSG00000085265	FCN1	FCNM	ficolin 1	protein-coding
14.2-2	chr14	55396417	55396763	+	0.0666667	NA	intron (NM_014924, intron 2 of 9)	intron (NM_014924, intron 2 of 9)	15268	NM_014924	22863	Hs.414809	NM_014924	ENSG00000126775	ATG14	ATG14L|BARKOR|KIAA0831	autophagy related 14	protein-coding
16.1-2	chr1	245111274	245111678	+	0.0666667	NA	intron (NM_001143943, intron 6 of 6)	intron (NM_001143943, intron 6 of 6)	-43509	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding
26.7667-3	chr10	104436947	104437612	+	0.0666667	NA	intron (NM_001008723, intron 15 of 17)	intron (NM_001008723, intron 15 of 17)	42996	NR_120624	101927523	Hs.407539	NR_120624	ENSG00000225768	LINC02620	-	long intergenic non-protein coding RNA 2620	ncRNA
12.7667-5	chr5	98749443	98749672	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-19075	NM_001366510	285704	Hs.526902	NM_173670	ENSG00000174136	RGMB	DRAGON	repulsive guidance molecule BMP co-receptor b	protein-coding
12.6-8	chr6	43846803	43847158	+	0.0666667	NA	intron (NR_149142, intron 3 of 3)	L5|LINE|RTE-X	5353	NR_149142	285857	Hs.582798	NR_149142	ENSG00000283215	LINC02537	-	long intergenic non-protein coding RNA 2537	ncRNA
19.2667	chr1	60705828	60706277	+	0.0666667	NA	intron (NR_110628, intron 4 of 5)	L1M3|LINE|L1	-83367	NR_146508	105378763	Hs.551175	NR_146508	ENSG00000226476	LINC01748	-	long intergenic non-protein coding RNA 1748	ncRNA
20.0667-16	chr6	74230677	74231223	+	0.0666667	NA	intron (NR_110856, intron 1 of 3)	intron (NR_110856, intron 1 of 3)	161499	NR_110856	101928516	Hs.384600	NR_110856	ENSG00000223786	LOC101928516	-	uncharacterized LOC101928516	ncRNA
19.9667-3	chr11	45393879	45394292	+	0.0666667	NA	Intergenic	Intergenic	22688	NR_122071	399886	Hs.559970	NR_122071	ENSG00000255267	LINC02687	-	long intergenic non-protein coding RNA 2687	ncRNA
20.2-7	chr20	31900003	31900486	+	0.0666667	NA	intron (NM_001367620, intron 4 of 11)	MIR|SINE|MIR	20427	NM_001367620	164395	Hs.712915	NM_001008409	ENSG00000131044	TTLL9	C20orf125	tubulin tyrosine ligase like 9	protein-coding
15.1333-2	chr10	67024975	67025202	+	0.0666667	NA	intron (NR_111909, intron 2 of 2)	AluSp|SINE|Alu	12822	NR_111909	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding
18.1333-11	chr2	55112233	55112629	+	0.0666667	NA	intron (NM_001321904, intron 1 of 9)	MIRb|SINE|MIR	25400	NM_001321904	57142	Hs.637850	NM_007008	ENSG00000115310	RTN4	ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C	reticulon 4	protein-coding
13.8667-8	chr4	21026860	21027068	+	0.0666667	NA	intron (NM_147182, intron 2 of 8)	intron (NM_147182, intron 2 of 8)	-42955	NM_001363504	80333	Hs.655705	NM_025221	ENSG00000185774	KCNIP4	CALP|KCHIP4	potassium voltage-gated channel interacting protein 4	protein-coding
35.8	chr12	73235360	73236074	+	0.0666667	NA	Intergenic	MER52A|LTR|ERV1	76527	NR_110130	101928137	Hs.694666	NR_110130	ENSG00000258123	LINC02444	-	long intergenic non-protein coding RNA 2444	ncRNA
9.63333-3	chr8	138190628	138190845	+	0.0666667	NA	intron (NM_015912, intron 9 of 19)	MER4D1|LTR|ERV1	-107191	NR_161374	401478	Hs.654931	NM_001354876		LOC401478	-	uncharacterized LOC401478	ncRNA
20.0333-18	chr9	91033473	91033818	+	0.0666667	NA	Intergenic	MER58C|DNA|hAT-Charlie	41487	NR_033912	100129316	Hs.458154	NR_033912		LOC100129316	-	uncharacterized LOC100129316	ncRNA
14.1-2	chr11	127302023	127302331	+	0.0666667	NA	intron (NR_120580, intron 1 of 2)	intron (NR_120580, intron 1 of 2)	31107	NR_120580	101929497	Hs.737442	NR_120580	ENSG00000273409	LINC02712	-	long intergenic non-protein coding RNA 2712	ncRNA
7.2	chr12	31760830	31760939	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	31414	NM_001013699	440093	Hs.448697	NM_001013699	ENSG00000188375	H3F3C	H3.5	H3 histone family member 3C	protein-coding
24.8-2	chr1	173987251	173987711	+	0.0666667	NA	intron (NM_001300852, intron 1 of 18)	L1MC3|LINE|L1	5591	NM_172071	149041	Hs.30258	NM_172071	ENSG00000135870	RC3H1	RNF198|ROQUIN	ring finger and CCCH-type domains 1	protein-coding
9.03333-6	chrX	98139257	98139494	+	0.0666667	NA	Intergenic	MLT1F|LTR|ERVL-MaLR	-574840	NR_125391	10824	Hs.654372	NR_125391	ENSG00000236256	DIAPH2-AS1	EPAG	DIAPH2 antisense RNA 1	ncRNA
7.93334-3	chrX	76209339	76209466	+	0.0666667	NA	Intergenic	Intergenic	36340	NM_016500	51260	Hs.370100	NM_016500	ENSG00000102390	PBDC1	CXorf26	polysaccharide biosynthesis domain containing 1	protein-coding
18.9-5	chr12	78289045	78289536	+	0.0666667	NA	Intergenic	Intergenic	70456	NR_135021	105369860	Hs.156898	NR_135021	ENSG00000258220	LINC02424	-	long intergenic non-protein coding RNA 2424	ncRNA
10.4333-2	chr5	130911769	130912063	+	0.0666667	NA	Intergenic	L1MA4|LINE|L1	253340	NM_005340	3094	Hs.483305	NM_005340	ENSG00000169567	HINT1	HINT|NMAN|PKCI-1|PRKCNH1	histidine triad nucleotide binding protein 1	protein-coding
19.1333-5	chr2	46168157	46168524	+	0.0666667	NA	intron (NM_005400, intron 14 of 14)	intron (NM_005400, intron 14 of 14)	-129067	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding
17.4333-2	chr14	64676045	64676363	+	0.0666667	NA	Intergenic	Intergenic	-28220	NM_001308147	26030	Hs.509637	NM_015549	ENSG00000126822	PLEKHG3	ARHGEF43|KIAA0599	pleckstrin homology and RhoGEF domain containing G3	protein-coding
21.2-22	chr7	3864401	3864836	+	0.0666667	NA	intron (NM_152744, intron 5 of 44)	LTR79|LTR|ERVL	-265067	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
12.7-2	chr16	62780724	62781051	+	0.0666667	NA	Intergenic	L1MA9|LINE|L1	-744449	NM_001796	1006	Hs.368322	NM_001796	ENSG00000150394	CDH8	Nbla04261	cadherin 8	protein-coding
9.59999-2	chr3	104059395	104059657	+	0.0666667	NA	Intergenic	Intergenic	-535410	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
24.4667	chr10	39021017	39021644	+	0.0666667	NA	Intergenic	ALR/Alpha|Satellite|centr	324734	NR_045000	399746	Hs.742607	NR_045000		ACTR3BP5	FKSG74	ACTR3B pseudogene 5	pseudo
13.9-5	chr19	29660849	29661168	+	0.0666667	NA	Intergenic	Intergenic	-4453	NM_024310	79156	Hs.466383	NM_024310	ENSG00000166289	PLEKHF1	APPD|LAPF|PHAFIN1|ZFYVE15	pleckstrin homology and FYVE domain containing 1	protein-coding
8.46667	chr10	62541164	62541292	+	0.0666667	NA	intron (NM_199452, intron 1 of 6)	intron (NM_199452, intron 1 of 6)	20780	NM_199452	22891	Hs.22653	NM_014951	ENSG00000138311	ZNF365	Su48|UAN|ZNF365D	zinc finger protein 365	protein-coding
20.4667-3	chr10	19515803	19516110	+	0.0666667	NA	intron (NM_001142308, intron 31 of 39)	MER34B-int|LTR|ERV1	212594	NR_120646	101928834	Hs.676482	NR_120646	ENSG00000233968	LOC101928834	-	uncharacterized LOC101928834	ncRNA
20.8-12	chr4	41953791	41954348	+	0.0666667	NA	intron (NM_018126, intron 6 of 6)	intron (NM_018126, intron 6 of 6)	18640	NM_018126	55161	Hs.31082	NM_018126	ENSG00000109133	TMEM33	1600019D15Rik|Pom33|SHINC-3|SHINC3	transmembrane protein 33	protein-coding
18.3667-3	chr11	115529880	115530320	+	0.0666667	NA	Intergenic	L1MB4|LINE|L1	-25685	NM_014333	23705	Hs.370510	NM_014333	ENSG00000182985	CADM1	BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1	cell adhesion molecule 1	protein-coding
27.4-21	chr8	105047956	105048668	+	0.0666667	NA	Intergenic	Intergenic	-270126	NM_012082	23414	Hs.431009	NM_012082	ENSG00000169946	ZFPM2	DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2	zinc finger protein, FOG family member 2	protein-coding
21.2-8	chr14	82794299	82794911	+	0.0666667	NA	Intergenic	Intergenic	151973	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
18.7-9	chr5	14688784	14689311	+	0.0666667	NA	intron (NM_138348, intron 5 of 6)	MIR|SINE|MIR	-23647	NR_046285	100130744	Hs.660550	NR_046285		LOC100130744	-	uncharacterized LOC100130744	ncRNA
8-3	chr8	133900862	133901038	+	0.0666667	NA	intron (NR_125424, intron 3 of 3)	intron (NR_125424, intron 3 of 3)	14454	NR_125424	101927822	Hs.129114	NR_125424	ENSG00000253593	LOC101927822	-	uncharacterized LOC101927822	ncRNA
17.7333-18	chr7	156094895	156095269	+	0.0666667	NA	Intergenic	Intergenic	132450	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding
18.5667-7	chr2	139137446	139137860	+	0.0666667	NA	Intergenic	Intergenic	240329	NR_033658	647012	Hs.639411	NR_033658		YY1P2	-	YY1 transcription factor pseudogene 2	pseudo
21.3-19	chr6	161515885	161516284	+	0.0666667	NA	intron (NM_004562, intron 9 of 11)	intron (NM_004562, intron 9 of 11)	45107	NR_134594	105378098	Hs.691066	NR_134593		LOC105378098	-	uncharacterized LOC105378098	ncRNA
5.7-2	chr17	71045706	71045798	+	0.0666667	NA	Intergenic	Intergenic	156427	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility 17	ncRNA
19.8667-8	chr22	27688009	27688531	+	0.0666667	NA	Intergenic	MLT1J2|LTR|ERVL-MaLR	113486	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	MN1 proto-oncogene, transcriptional regulator	protein-coding
18.9-9	chr20	45538097	45538513	+	0.0666667	NA	intron (NM_001198986, intron 3 of 4)	intron (NM_001198986, intron 3 of 4)	1177	NM_080827	140870	Hs.673237	NM_080827	ENSG00000243543	WFDC6	C20orf171|HEL-S-295|WAP6|dJ461P17.11	WAP four-disulfide core domain 6	protein-coding
19.3333-12	chr4	106817860	106818404	+	0.0666667	NA	Intergenic	Intergenic	218181	NM_014421	27123	Hs.211869	NM_014421	ENSG00000155011	DKK2	DKK-2	dickkopf WNT signaling pathway inhibitor 2	protein-coding
7.23333	chr1	174850683	174850891	+	0.0666667	NA	intron (NM_001366446, intron 19 of 25)	MLT1E2|LTR|ERVL-MaLR	-23599	NM_001243763	9910	Hs.585378	NM_014857	ENSG00000152061	RABGAP1L	HHL|TBC1D18	RAB GTPase activating protein 1 like	protein-coding
21.8333-4	chr2	54510329	54510902	+	0.0666667	NA	intron (NM_003128, intron 1 of 35)	intron (NM_003128, intron 1 of 35)	-18607	NR_002229	56969	Hs.657366	NM_020217		RPL23AP32	RPL23A_9_220	ribosomal protein L23a pseudogene 32	pseudo
24.6-9	chr5	59407283	59407973	+	0.0666667	NA	intron (NM_001165899, intron 3 of 16)	MSTB-int|LTR|ERVL-MaLR	-50658	NM_001197219	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
11.8667-4	chrX	68593395	68593581	+	0.0666667	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	-54181	NM_001142503	9754	Hs.95140	NM_014725	ENSG00000130052	STARD8	ARHGAP38|DLC3|STARTGAP3	StAR related lipid transfer domain containing 8	protein-coding
11.3667	chr1	60862046	60862369	+	0.0666667	NA	Intergenic	Intergenic	-36623	NR_110628	101926964	Hs.650459	NR_110628	ENSG00000231252	LOC101926964	-	uncharacterized LOC101926964	ncRNA
18.4333-10	chr8	58112893	58113378	+	0.0666667	NA	intron (NM_147189, intron 4 of 4)	MLT1A0|LTR|ERVL-MaLR	118612	NM_147189	90362	Hs.154652	NM_147189	ENSG00000169122	FAM110B	C8orf72	family with sequence similarity 110 member B	protein-coding
28.1-6	chr18	13126436	13126964	+	0.0666667	NA	Intergenic	Intergenic	-92060	NM_181482	753	Hs.697787	NM_004338	ENSG00000168675	LDLRAD4	C18orf1	low density lipoprotein receptor class A domain containing 4	protein-coding
5.63333-2	chr5	166631732	166631878	+	0.0666667	NA	Intergenic	Intergenic	294565	NR_108020	102557615		NR_108020	ENSG00000254130	LINC01947	CTB-7E3.1	long intergenic non-protein coding RNA 1947	ncRNA
23.4333	chr1	47595178	47595649	+	0.0666667	NA	Intergenic	MSTB|LTR|ERVL-MaLR	-158096	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA
7.4-6	chr6	145295633	145295744	+	0.0666667	NA	Intergenic	MLT2D|LTR|ERVL	391189	NM_001368132	7957	Hs.486696	NM_005670	ENSG00000112425	EPM2A	EPM2|MELF	EPM2A glucan phosphatase, laforin	protein-coding
7.83334	chr15	70511094	70511217	+	0.0666667	NA	Intergenic	L1PA16|LINE|L1	-5227	NR_146562	105370880		NR_146562	ENSG00000259473	LINC02205	-	long intergenic non-protein coding RNA 2205	ncRNA
23.4-9	chr5	7349953	7350622	+	0.0666667	NA	Intergenic	L1MD2|LINE|L1	-2310	NR_134277	101929261	Hs.308202	NR_134277	ENSG00000250668	LINC02123	-	long intergenic non-protein coding RNA 2123	ncRNA
21.7333-12	chrX	154696786	154697412	+	0.0666667	NA	intron (NR_104114, intron 6 of 8)	intron (NR_104114, intron 6 of 8)	-43520	NM_020994	30848	Hs.87225	NM_020994	ENSG00000126890	CTAG2	CAMEL|CT2|CT6.2|CT6.2a|CT6.2b|ESO2|LAGE-1|LAGE2B	cancer/testis antigen 2	protein-coding
23.1-4	chr14	49789424	49789917	+	0.0666667	NA	intron (NM_001301732, intron 25 of 31)	intron (NM_001301732, intron 25 of 31)	21517	NM_014315	23588	Hs.509264	NM_014315	ENSG00000165516	KLHDC2	HCLP-1|HCLP1|LCP	kelch domain containing 2	protein-coding
26.5-10	chr7	43848340	43849061	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	20817	NM_032014	64951	Hs.284286	NM_032014	ENSG00000062582	MRPS24	HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47	mitochondrial ribosomal protein S24	protein-coding
21.2333-6	chr15	77840021	77840640	+	0.0666667	NA	Intergenic	LTR16A1|LTR|ERVL	-19430	NM_001301186	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|MRT64|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
21.4-13	chr7	32429643	32430061	+	0.0666667	NA	Intergenic	MLT2B4|LTR|ERVL	-1628	NM_001322059	5137	Hs.143821	NM_005020	ENSG00000154678	PDE1C	DFNA74|Hcam3|cam-PDE 1C|hCam-3	phosphodiesterase 1C	protein-coding
15	chr1	114758175	114758447	+	0.0666667	NA	promoter-TSS (NM_001242892)	promoter-TSS (NM_001242892)	-261	NM_001242891	7812	Hs.69855	NM_007158	ENSG00000009307	CSDE1	D1S155E|UNR	cold shock domain containing E1	protein-coding
23.9667-11	chr7	86741336	86741821	+	0.0666667	NA	intron (NM_001363522, intron 1 of 4)	MIR1_Amn|SINE|MIR	97664	NM_000840	2913	Hs.590575	NM_000840	ENSG00000198822	GRM3	GLUR3|GPRC1C|MGLUR3|mGlu3	glutamate metabotropic receptor 3	protein-coding
10.7333-2	chr10	23497550	23497712	+	0.0666667	NA	Intergenic	Intergenic	58362	NM_001145373	220213	Hs.499042	NM_001145373	ENSG00000165312	OTUD1	DUBA7|OTDC1	OTU deubiquitinase 1	protein-coding
21.0333-9	chr19	45532879	45533501	+	0.0666667	NA	intron (NM_001017989, intron 1 of 1)	AluSq2|SINE|Alu	25711	NM_003370	7408	Hs.515469	NM_003370	ENSG00000125753	VASP	-	vasodilator stimulated phosphoprotein	protein-coding
19.4-7	chr15	97915903	97916194	+	0.0666667	NA	Intergenic	Intergenic	-41619	NR_024173	91948	Hs.130423	NR_024172	ENSG00000251209	LINC00923	-	long intergenic non-protein coding RNA 923	ncRNA
26.6-4	chr1	242452891	242453483	+	0.0666667	NA	intron (NM_001320272, intron 2 of 10)	MLT1A0|LTR|ERVL-MaLR	-3705	NM_001195811	200150	Hs.672452	NM_152666	ENSG00000180287	PLD5	PLDC	phospholipase D family member 5	protein-coding
19.9333-14	chr22	27466762	27467080	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	156270	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LINC02554	-	long intergenic non-protein coding RNA 2554	ncRNA
12.3333-9	chr21	19490262	19490572	+	0.0666667	NA	Intergenic	MER58D|DNA|hAT-Charlie	409338	NR_146910	105372746	Hs.580899	NR_146910	ENSG00000233480	LINC01683	C21orf40	long intergenic non-protein coding RNA 1683	ncRNA
15.8333-4	chr10	78109911	78110215	+	0.0666667	NA	Intergenic	AluJo|SINE|Alu	76200	NM_001142285	6229	Hs.280130	NM_001026	ENSG00000138326	RPS24	DBA3|S24|eS24	ribosomal protein S24	protein-coding
6.69999	chr13	25083184	25083376	+	0.0666667	NA	Intergenic	MSTD|LTR|ERVL-MaLR	-12858	NM_030979	5042	Hs.458280	NM_030979	ENSG00000151846	PABPC3	PABP3|PABPL3|tPABP	poly(A) binding protein cytoplasmic 3	protein-coding
14.8333-11	chr20	387239	387588	+	0.0666667	NA	intron (NM_001301201, intron 2 of 4)	L1ME4b|LINE|L1	6070	NM_001301190	57761	Hs.516826	NM_021158	ENSG00000101255	TRIB3	C20orf97|NIPK|SINK|SKIP3|TRB3	tribbles pseudokinase 3	protein-coding
10.7-7	chr5	26996891	26997150	+	0.0666667	NA	intron (NM_016279, intron 1 of 11)	intron (NM_016279, intron 1 of 11)	41566	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
21.3-9	chr17	73200805	73201318	+	0.0666667	NA	intron (NM_018714, intron 6 of 13)	intron (NM_018714, intron 6 of 13)	8006	NM_018714	9382	Hs.103555	NM_018714	ENSG00000166685	COG1	CDG2G|LDLB	component of oligomeric golgi complex 1	protein-coding
16.4667-4	chr12	100668275	100668594	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	74816	NM_001303131	283431	Hs.20575	NM_174942	ENSG00000139354	GAS2L3	G2L3	growth arrest specific 2 like 3	protein-coding
26.8-6	chr18	2649724	2650272	+	0.0666667	NA	Intergenic	Intergenic	5397	NR_033754	645158	Hs.712861	NR_033754	ENSG00000266405	CBX3P2	-	chromobox 3 pseudogene 2	pseudo
16.7667-11	chr8	61955574	61955976	+	0.0666667	NA	Intergenic	HAL1ME|LINE|L1	65936	NR_149085	111082988	Hs.521600	NR_149085	ENSG00000254120	LINC02155	-	long intergenic non-protein coding RNA 2155	ncRNA
21.7667	chr10	86548840	86549363	+	0.0666667	NA	Intergenic	AluSq|SINE|Alu	-27309	NM_015045	23063	Hs.203099	NM_015045	ENSG00000062650	WAPL	FOE|KIAA0261|WAPAL	WAPL cohesin release factor	protein-coding
19.8-22	chr7	21470146	21470589	+	0.0666667	NA	promoter-TSS (NR_031594)	promoter-TSS (NR_031594)	-691	NR_031594	100302122		NR_031594	ENSG00000221783	MIR1183	MIRN1183|hsa-mir-1183	microRNA 1183	ncRNA
14.0333-2	chr11	18243504	18243847	+	0.0666667	NA	intron (NM_001127380, intron 3 of 3)	intron (NM_001127380, intron 3 of 3)	4993	NM_030754	6289	Hs.731376	NM_030754	ENSG00000134339	SAA2	SAA|SAA1	serum amyloid A2	protein-coding
16.7333-15	chr6	144203339	144203732	+	0.0666667	NA	Intergenic	MLT1L|LTR|ERVL-MaLR	53018	NM_003764	8676	Hs.118958	NM_003764	ENSG00000135604	STX11	FHL4|HLH4|HPLH4	syntaxin 11	protein-coding
27.4333-2	chr10	49776912	49777672	+	0.0666667	NA	Intergenic	Intergenic	-14913	NM_001347822	55753	Hs.17860	NM_018245	ENSG00000197444	OGDHL	-	oxoglutarate dehydrogenase like	protein-coding
23.2667-13	chr7	118543453	118544029	+	0.0666667	NA	Intergenic	L1MA3|LINE|L1	319037	NM_019644	56311	Hs.729340	NM_019644	ENSG00000106013	ANKRD7	TSA806	ankyrin repeat domain 7	protein-coding
26.1667	chr12	56463659	56464211	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	-4643	NM_207344	283377	Hs.128676	NM_207344	ENSG00000176422	SPRYD4	-	SPRY domain containing 4	protein-coding
14.2-4	chr2	239848854	239849123	+	0.0666667	NA	Intergenic	L1PB1|LINE|L1	86128	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA
22.7333-5	chr2	146211862	146212361	+	0.0666667	NA	Intergenic	Intergenic	-374946	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
10.5-3	chr2	216470487	216470796	+	0.0666667	NA	intron (NM_001127207, intron 14 of 17)	AluJo|SINE|Alu	-28203	NM_000998	6168	Hs.433701	NM_000998	ENSG00000197756	RPL37A	L37A	ribosomal protein L37a	protein-coding
25.4333-11	chr4	142576190	142576697	+	0.0666667	NA	intron (NM_003866, intron 2 of 26)	intron (NM_003866, intron 2 of 26)	270092	NM_001331040	8821	Hs.176376	NM_003866	ENSG00000109452	INPP4B	-	inositol polyphosphate-4-phosphatase type II B	protein-coding
19.7667	chr1	19109757	19110264	+	0.0666667	NA	intron (NM_020765, intron 81 of 105)	intron (NM_020765, intron 81 of 105)	100256	NM_020765	23352	Hs.148078	NM_020765	ENSG00000127481	UBR4	RBAF600|ZUBR1|p600	ubiquitin protein ligase E3 component n-recognin 4	protein-coding
15.5667-8	chr3	39096663	39097043	+	0.0666667	NA	TTS (NM_001303403)	TTS (NM_001303403)	10774	NM_001278789	64689	Hs.721946	NM_031899	ENSG00000114745	GORASP1	GOLPH5|GRASP65|P65	golgi reassembly stacking protein 1	protein-coding
8.86666	chr1	157336944	157337149	+	0.0666667	NA	Intergenic	L1MD|LINE|L1	-198455	NM_005240	2117	Hs.105636	NM_005240	ENSG00000117036	ETV3	METS|PE-1|PE1	ETS variant 3	protein-coding
20.3333-9	chr13	44762000	44762567	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	47347	NR_038433	144817	Hs.585616	NR_038433	ENSG00000235097	LINC00330	NCRNA00330	long intergenic non-protein coding RNA 330	ncRNA
7.7-2	chr9	14399587	14399763	+	0.0666667	NA	promoter-TSS (NM_001190738)	promoter-TSS (NM_001190738)	-692	NM_001190738	4781	Hs.644095	NM_005596	ENSG00000147862	NFIB	CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3	nuclear factor I B	protein-coding
34-11	chrX	95930591	95931215	+	0.0666667	NA	Intergenic	Intergenic	406999	NR_003539	643486	Hs.590806	NR_003539	ENSG00000271209	BRDTP1	-	bromodomain testis associated pseudogene 1	pseudo
19.0667-6	chr19	28160230	28160716	+	0.0666667	NA	Intergenic	(AC)n|Simple_repeat|Simple_repeat	-366533	NR_027301	148189	Hs.706547	NR_027301	ENSG00000261824	LINC00662	-	long intergenic non-protein coding RNA 662	ncRNA
19.2667-2	chr11	82593488	82594001	+	0.0666667	NA	Intergenic	Intergenic	140120	NM_175885	220382	Hs.448218	NM_175885	ENSG00000182103	FAM181B	-	family with sequence similarity 181 member B	protein-coding
20.4333-7	chr4	94831059	94831403	+	0.0666667	NA	intron (NM_001203, intron 1 of 12)	Tigger3b|DNA|TcMar-Tigger	73276	NM_001203	658	Hs.598475	NM_001203	ENSG00000138696	BMPR1B	ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293	bone morphogenetic protein receptor type 1B	protein-coding
16.2-9	chr2	115483429	115483673	+	0.0666667	NA	intron (NM_001321912, intron 4 of 25)	intron (NM_001321912, intron 4 of 25)	139736	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
14.2667	chr1	102301235	102301518	+	0.0666667	NA	Intergenic	Intergenic	-304142	NM_001288823	118427	Hs.484475	NM_058170	ENSG00000118733	OLFM3	NOE3|NOELIN3|OPTIMEDIN	olfactomedin 3	protein-coding
22.6667-7	chr7	20789719	20790114	+	0.0666667	NA	Intergenic	Intergenic	-3030	NM_198956	221833	Hs.195922	NM_182700	ENSG00000164651	SP8	BTD	Sp8 transcription factor	protein-coding
20.9666-3	chr4	130074644	130075240	+	0.0666667	NA	Intergenic	Intergenic	-301419	NR_147186	105377420		NR_147186		LINC02479	-	long intergenic non-protein coding RNA 2479	ncRNA
6.43334	chr3	113242037	113242133	+	0.0666667	NA	intron (NM_001301861, intron 2 of 19)	intron (NM_001301861, intron 2 of 19)	29969	NM_001301861	91653	Hs.591318	NM_033254	ENSG00000144857	BOC	CDON2	BOC cell adhesion associated, oncogene regulated	protein-coding
19.4333-6	chr2	191955255	191955692	+	0.0666667	NA	intron (NM_001305134, intron 8 of 9)	AluJr|SINE|Alu	-108385	NM_004657	8436	Hs.26530	NM_004657	ENSG00000168497	CAVIN2	PS-p68|SDPR|SDR|cavin-2	caveolae associated protein 2	protein-coding
20.6	chr1	208222885	208223232	+	0.0666667	NA	intron (NM_025179, intron 1 of 31)	intron (NM_025179, intron 1 of 31)	21326	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding
19-10	chr2	68368390	68368828	+	0.0666667	NA	intron (NM_002664, intron 1 of 8)	intron (NM_002664, intron 1 of 8)	3327	NM_002664	5341	Hs.468840	NM_002664	ENSG00000115956	PLEK	P47	pleckstrin	protein-coding
23.9-8	chr5	79544377	79544955	+	0.0666667	NA	Intergenic	Intergenic	-30532	NM_004272	9456	Hs.591761	NM_004272	ENSG00000152413	HOMER1	HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1	homer scaffold protein 1	protein-coding
26.5333-14	chr8	116311598	116312100	+	0.0666667	NA	intron (NR_046215, intron 1 of 13)	intron (NR_046215, intron 1 of 13)	13210	NR_046215	100859921	Hs.552281	NR_046215	ENSG00000249917	LINC00536	-	long intergenic non-protein coding RNA 536	ncRNA
11.4-9	chr6	14942172	14942458	+	0.0666667	NA	Intergenic	MIR3|SINE|MIR	-303754	NM_004973	3720	Hs.269059	NM_004973	ENSG00000008083	JARID2	JMJ	jumonji and AT-rich interaction domain containing 2	protein-coding
21.6333-7	chr3	40707376	40707915	+	0.0666667	NA	Intergenic	L1MC1|LINE|L1	182685	NM_001098414	285268	Hs.19977	NM_198484	ENSG00000172888	ZNF621	-	zinc finger protein 621	protein-coding
33.6333-3	chr2	22250895	22251656	+	0.0666667	NA	Intergenic	Intergenic	-285204	NR_110577	102723362	Hs.502887	NR_110577	ENSG00000233587	LINC01884	-	long intergenic non-protein coding RNA 1884	ncRNA
12-5	chr5	147894449	147894737	+	0.0666667	NA	intron (NM_206966, intron 3 of 3)	intron (NM_206966, intron 3 of 3)	11945	NM_206966	389336	Hs.660038	NM_206966	ENSG00000178776	C5orf46	SSSP1	chromosome 5 open reading frame 46	protein-coding
12.7-9	chr8	91648823	91649079	+	0.0666667	NA	Intergenic	Intergenic	368729	NM_175636	862	Hs.368431	NM_004349	ENSG00000079102	RUNX1T1	AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2	RUNX1 partner transcriptional co-repressor 1	protein-coding
14.3-14	chr7	12454209	12454507	+	0.0666667	NA	Intergenic	Intergenic	-42071	NR_136261	102725191	Hs.602382	NR_136261	ENSG00000226690	LOC102725191	-	uncharacterized LOC102725191	ncRNA
17.8-22	chr8	83426948	83427361	+	0.0666667	NA	Intergenic	Intergenic	23396	NR_122034	103352670	Hs.399852	NR_122034	ENSG00000253898	LINC01419	LVCAT7|TCONS_00014497	long intergenic non-protein coding RNA 1419	ncRNA
22.7667-5	chr13	103866798	103867173	+	0.0666667	NA	Intergenic	Intergenic	441785	NR_126374	104326190	Hs.334381	NR_126374	ENSG00000234551	LINC01309	TCONS_l2_00007459	long intergenic non-protein coding RNA 1309	ncRNA
16.0333-5	chr18	1951130	1951461	+	0.0666667	NA	Intergenic	Intergenic	-591666	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
12.6333-3	chr15	96291847	96292081	+	0.0666667	NA	intron (NR_102744, intron 1 of 1)	intron (NR_102744, intron 1 of 1)	-34082	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding
25.6667-12	chr9	34787331	34787866	+	0.0666667	NA	Intergenic	Intergenic	50988	NR_024481	389715	Hs.713965	NM_001126494		FAM205BP	C9orf144|C9orf144A|FAM205B	transmembrane protein C9orf144B pseudogene	pseudo
23.2-13	chr3	33411615	33412121	+	0.0666667	NA	intron (NM_001128160, intron 4 of 14)	intron (NM_001128160, intron 4 of 14)	28510	NM_001128160	7342	Hs.729120	NM_014517	ENSG00000153560	UBP1	LBP-1B|LBP-1a|LBP1A|LBP1B	upstream binding protein 1	protein-coding
16.7333-7	chr2	34524588	34525046	+	0.0666667	NA	Intergenic	LTR33|LTR|ERVL	-152740	NR_126404	104355288	Hs.624529	NR_126404	ENSG00000228262	LINC01320	-	long intergenic non-protein coding RNA 1320	ncRNA
29.3333-7	chr3	193954898	193955726	+	0.0666667	NA	Intergenic	(TTAT)n|Simple_repeat|Simple_repeat	38926	NR_027764	100128023	Hs.730112	NR_027764		DPPA2P3	-	developmental pluripotency associated 2 pseudogene 3	pseudo
20.7333-17	chr5	150753380	150753749	+	0.0666667	NA	exon (NM_016221, exon 3 of 13)	exon (NM_016221, exon 3 of 13)	4956	NM_001135644	51164	Hs.675564	NM_016221	ENSG00000132912	DCTN4	DYN4|P62	dynactin subunit 4	protein-coding
16.9-10	chr7	55962729	55963129	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-1656	NM_001483	2631	Hs.591069	NM_001483	ENSG00000146729	NIPSNAP2	GBAS	nipsnap homolog 2	protein-coding
20.7-3	chr4	87470405	87470816	+	0.0666667	NA	Intergenic	Intergenic	48013	NM_198038	53343	Hs.149500	NM_024047	ENSG00000170502	NUDT9	NUDT10	nudix hydrolase 9	protein-coding
30.2667-5	chr3	129851811	129852366	+	0.0666667	NA	intron (NM_001349263, intron 2 of 7)	AluJb|SINE|Alu	41488	NM_001128224	23023	Hs.477547	NM_015008	ENSG00000172765	TMCC1	-	transmembrane and coiled-coil domain family 1	protein-coding
21.9-13	chr7	79692449	79692958	+	0.0666667	NA	Intergenic	MER54B|LTR|ERVL	238743	NR_038343	100505881	Hs.31474	NR_038343	ENSG00000234456	MAGI2-AS3	-	MAGI2 antisense RNA 3	ncRNA
13.9667-7	chr5	171809314	171809671	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	23620	NM_001289970	644994	Hs.591740	NM_001289970	ENSG00000185662	SMIM23	C5orf50	small integral membrane protein 23	protein-coding
4.63334	chr4	6268713	6268782	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-1103	NM_001145853	7466	Hs.518602	NM_006005	ENSG00000109501	WFS1	CTRCT41|WFRS|WFS|WFSL	wolframin ER transmembrane glycoprotein	protein-coding
7.26667-2	chr11	7758676	7758791	+	0.0666667	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	38209	NM_153444	120065	Hs.351824	NM_153444	ENSG00000183303	OR5P2	JCG3|JCG4	olfactory receptor family 5 subfamily P member 2	protein-coding
16.6667-7	chr22	20748975	20749438	+	0.0666667	NA	intron (NM_058004, intron 28 of 54)	intron (NM_058004, intron 28 of 54)	-24907	NM_000185	3053	Hs.474270	NM_000185	ENSG00000099937	SERPIND1	D22S673|HC2|HCF2|HCII|HLS2|LS2|THPH10	serpin family D member 1	protein-coding
10.1333	chr1	23644127	23644374	+	0.0666667	NA	Intergenic	Intergenic	16916	NM_001348075	259283	Hs.523369	NM_001348075		MDS2	-	myelodysplastic syndrome 2 translocation associated	protein-coding
35.1667-7	chr2	204807938	204808672	+	0.0666667	NA	intron (NM_205863, intron 2 of 21)	intron (NM_205863, intron 2 of 21)	262830	NM_205863	117583	Hs.657382	NM_057177	ENSG00000116117	PARD3B	ALS2CR19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding
16.7-2	chr10	60281542	60281989	+	0.0666667	NA	intron (NM_001204403, intron 2 of 43)	intron (NM_001204403, intron 2 of 43)	108110	NM_001320874	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding
24-20	chr8	132108992	132109512	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	-3987	NM_001145095	10086	Hs.285026	NM_005712	ENSG00000132297	HHLA1	PLA2L	HERV-H LTR-associating 1	protein-coding
19.3667-2	chr11	107276502	107277025	+	0.0666667	NA	Intergenic	Intergenic	181083	NM_152434	143884	Hs.212140	NM_152434	ENSG00000152404	CWF19L2	-	CWF19 like cell cycle control factor 2	protein-coding
7.33333-2	chr8	102475842	102476021	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	-63231	NM_015902	51366	Hs.492445	NM_015902	ENSG00000104517	UBR5	DD5|EDD|EDD1|HYD	ubiquitin protein ligase E3 component n-recognin 5	protein-coding
11.6667-3	chr10	104146427	104146673	+	0.0666667	NA	intron (NM_025145, intron 29 of 37)	intron (NM_025145, intron 29 of 37)	24379	NM_001002759	119392	Hs.93667	NM_145247	ENSG00000156384	SFR1	C10orf78|MEI5|MEIR5|bA373N18.1	SWI5 dependent homologous recombination repair protein 1	protein-coding
19-17	chr6	44169552	44169968	+	0.0666667	NA	intron (NM_007058, intron 3 of 22)	intron (NM_007058, intron 3 of 22)	10940	NM_007058	11131	Hs.225953	NM_007058	ENSG00000137225	CAPN11	calpain11	calpain 11	protein-coding
25.6333-10	chr5	18629281	18629723	+	0.0666667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	822228	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
24.3333-7	chr18	42020166	42020818	+	0.0666667	NA	intron (NM_001308020, intron 11 of 23)	intron (NM_001308020, intron 11 of 23)	65258	NM_001308020	5289	Hs.464971	NM_002647	ENSG00000078142	PIK3C3	VPS34|Vps34|hVps34	phosphatidylinositol 3-kinase catalytic subunit type 3	protein-coding
12.0667-13	chr8	123566152	123566397	+	0.0666667	NA	Intergenic	Intergenic	-25068	NM_058229	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding
13.6667-7	chr2	172917691	172918024	+	0.0666667	NA	exon (NM_001100397, exon 2 of 28)	exon (NM_001100397, exon 2 of 28)	-10348	NM_001282901	11069	Hs.470646	NM_007023	ENSG00000091428	RAPGEF4	CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496	Rap guanine nucleotide exchange factor 4	protein-coding
28-7	chr6	164873239	164874058	+	0.0666667	NA	Intergenic	MLT1J-int|LTR|ERVL-MaLR	-51585	NR_131926	105378111		NR_131926		MEAT6	-	melanoma-associated transcript 6	ncRNA
30.3667-7	chr3	72703959	72704509	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-39985	NR_135531	105377162	Hs.123457	NR_135531		LOC105377162	-	uncharacterized LOC105377162	ncRNA
11.5667-8	chr7	38787990	38788240	+	0.0666667	NA	intron (NM_014396, intron 10 of 28)	MIRb|SINE|MIR	-101026	NR_028347	340286	Hs.144075	NM_001105282	ENSG00000164556	FAM183BP	FAM183B|THEG6	acyloxyacyl hydrolase (neutrophil)	pseudo
22.4333-3	chr1	216434984	216435537	+	0.0666667	NA	Intergenic	Intergenic	-11812	NM_206933	7399	Hs.655974	NM_007123	ENSG00000042781	USH2A	RP39|US2|USH2|dJ1111A8.1	usherin	protein-coding
14.6-10	chr4	108411341	108411564	+	0.0666667	NA	Intergenic	L1MC3|LINE|L1	-145781	NR_134679	101929621	Hs.679455	NR_134679		LOC101929621	-	uncharacterized LOC101929621	ncRNA
8.7-4	chr9	86648859	86649061	+	0.0666667	NA	Intergenic	Intergenic	-294550	NM_001185074	79670	Hs.597057	NM_024617	ENSG00000083223	TUT7	PAPD6|TENT3B|ZCCHC6	terminal uridylyl transferase 7	protein-coding
10.4-13	chr9	72392594	72392881	+	0.0666667	NA	Intergenic	Intergenic	-27529	NM_001102420	7763	Hs.406096	NM_006007	ENSG00000107372	ZFAND5	ZA20D2|ZFAND5A|ZNF216	zinc finger AN1-type containing 5	protein-coding
16.6667-8	chr3	108876347	108876712	+	0.0666667	NA	Intergenic	Intergenic	53743	NM_016388	50852	Hs.138701	NM_016388	ENSG00000163519	TRAT1	HSPC062|TCRIM|TRIM|pp29/30	T cell receptor associated transmembrane adaptor 1	protein-coding
12.9-6	chr2	205576352	205576657	+	0.0666667	NA	intron (NM_205863, intron 21 of 21)	L1MC1|LINE|L1	-105996	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding
11.3333-9	chr6	131785130	131785374	+	0.0666667	NA	Intergenic	L2|LINE|L2	-6920	NR_039610	100616455		NR_039610	ENSG00000266807	MIR548H5	-	microRNA 548h-5	ncRNA
17.8-15	chr4	96193238	96193693	+	0.0666667	NA	Intergenic	Intergenic	-117238	NR_147149	105377338		NR_147149		LINC02267	-	long intergenic non-protein coding RNA 2267	ncRNA
7.23333-2	chr20	239188	239341	+	0.0666667	NA	Intergenic	Intergenic	12006	NM_080831	140881	Hs.112087	NM_080831	ENSG00000125903	DEFB129	C20orf87|DEFB-29|DEFB29|bA530N10.3|hBD-29	defensin beta 129	protein-coding
28.4333-4	chr21	30223502	30224232	+	0.0666667	NA	Intergenic	Intergenic	-7770	NM_199328	9073	Hs.162209	NM_012132	ENSG00000156284	CLDN8	HEL-S-79	claudin 8	protein-coding
5.43334	chr7	26562093	26562174	+	0.0666667	NA	Intergenic	Intergenic	-23308	NR_022006	9808	Hs.69749	NM_014769	ENSG00000122548	KIAA0087	-	KIAA0087 lncRNA	ncRNA
18.6	chr1	193755947	193756412	+	0.0666667	NA	Intergenic	L1ME2|LINE|L1	451434	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
8.26667-3	chr20	16256195	16256365	+	0.0666667	NA	Intergenic	MLT2B3|LTR|ERVL	-270398	NR_130924	613266	Hs.309149	NR_130924		LOC613266	-	uncharacterized LOC613266	ncRNA
19.2666	chr4	52852438	52853014	+	0.0666667	NA	Intergenic	Intergenic	-9591	NM_023940	65997	Hs.8035	NM_023940	ENSG00000128045	RASL11B	-	RAS like family 11 member B	protein-coding
31.1-3	chr1	244702228	244702762	+	0.0666667	NA	intron (NM_016076, intron 4 of 4)	AluSx|SINE|Alu	49369	NM_016076	51029	Hs.498317	NM_016076	ENSG00000121644	DESI2	C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1	desumoylating isopeptidase 2	protein-coding
7.2-2	chr2	83126248	83126356	+	0.0666667	NA	Intergenic	MLT1F1|LTR|ERVL-MaLR	269499	NR_033423	1720	Hs.169235	NR_033423		DHFRP3	-	dihydrofolate reductase pseudogene 3	pseudo
30.3667-9	chr5	118303659	118304307	+	0.0666667	NA	Intergenic	THE1C|LTR|ERVL-MaLR	21409	NR_104609	100505811	Hs.369776	NR_104609	ENSG00000250427	LINC02148	HNCAT21	long intergenic non-protein coding RNA 2148	ncRNA
16.9333-3	chr11	35878946	35879325	+	0.0666667	NA	Intergenic	L1ME2|LINE|L1	-64846	NM_001304264	143458	Hs.745134	NM_174902	ENSG00000179241	LDLRAD3	LRAD3	low density lipoprotein receptor class A domain containing 3	protein-coding
16.7-11	chr2	204508731	204509220	+	0.0666667	NA	Intergenic	Intergenic	-36500	NM_152526	117583	Hs.657382	NM_057177	ENSG00000116117	PARD3B	ALS2CR19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding
21.4-7	chr17	9960066	9960387	+	0.0666667	NA	promoter-TSS (NM_003644)	promoter-TSS (NM_003644)	-731	NM_003644	8522	Hs.462214	NM_003644	ENSG00000007237	GAS7	-	growth arrest specific 7	protein-coding
17.1333-13	chr2	47391302	47391734	+	0.0666667	NA	Intergenic	Intergenic	-11549	NM_000251	4436	Hs.597656	NM_000251	ENSG00000095002	MSH2	COCA1|FCC1|HNPCC|HNPCC1|LCFS2|hMSH2	mutS homolog 2	protein-coding
6.33334	chr10	72381883	72381978	+	0.0666667	NA	intron (NM_001195519, intron 5 of 6)	intron (NM_001195519, intron 5 of 6)	-27011	NM_001365080	54788	Hs.500013	NM_017626	ENSG00000148719	DNAJB12	DJ10	DnaJ heat shock protein family (Hsp40) member B12	protein-coding
14.6333-5	chr12	126473796	126474015	+	0.0666667	NA	Intergenic	L1PA16|LINE|L1	-24578	NR_147498	283435	Hs.667334	NR_147498		LINC02825	-	long intergenic non-protein coding RNA 2825	ncRNA
22.6333-11	chr2	39430800	39431213	+	0.0666667	NA	intron (NM_003618, intron 1 of 33)	L2a|LINE|L2	6279	NM_003618	8491	Hs.655750	NM_003618	ENSG00000011566	MAP4K3	GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1	mitogen-activated protein kinase kinase kinase kinase 3	protein-coding
15.6333-13	chr3	117242775	117243039	+	0.0666667	NA	Intergenic	Intergenic	321476	NR_121607	100506724	Hs.125983	NR_121607	ENSG00000242385	LINC00901	LSAMP-AS4|TCONS_00005428	long intergenic non-protein coding RNA 901	ncRNA
26.7333-19	chr8	80739396	80740109	+	0.0666667	NA	intron (NM_001033723, intron 2 of 8)	HERV17-int|LTR|ERV1	134716	NM_001367783	619279	Hs.434957	NM_032651	ENSG00000164684	ZNF704	Gig1	zinc finger protein 704	protein-coding
16.3667-9	chr6	6719206	6719693	+	0.0666667	NA	Intergenic	MamGypLTR1b|LTR|Gypsy	-96623	NR_026970	285780	Hs.655737	NM_173675	ENSG00000216863	LY86-AS1	LY86-AS|LY86AS	LY86 antisense RNA 1	ncRNA
14.1667-5	chr2	23653244	23653611	+	0.0666667	NA	intron (NM_052920, intron 5 of 13)	intron (NM_052920, intron 5 of 13)	268248	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding
11-8	chr3	124296684	124296995	+	0.0666667	NA	intron (NM_001024660, intron 5 of 59)	L2c|LINE|L2	-77493	NR_106731	102464832		NR_106731	ENSG00000276656	MIR6083	hsa-mir-6083	microRNA 6083	ncRNA
13.4-2	chr10	126259090	126259395	+	0.0666667	NA	intron (NM_001288974, intron 3 of 18)	MIRb|SINE|MIR	129235	NM_021641	8038	Hs.594351	NM_003474	ENSG00000148848	ADAM12	ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA	ADAM metallopeptidase domain 12	protein-coding
6.96667-3	chr7	81427686	81427813	+	0.0666667	NA	Intergenic	Intergenic	134070	NR_136264	105369146	Hs.730390	NR_136264		LOC105369146	-	uncharacterized LOC105369146	ncRNA
25.3333-7	chr2	70489503	70490190	+	0.0666667	NA	intron (NM_003236, intron 2 of 5)	MER5A1|DNA|hAT-Charlie	-8206	NR_046798	100874273	Hs.682157	NR_046798	ENSG00000224606	TGFA-IT1	-	TGFA intronic transcript 1	ncRNA
32.9667	chr1	231721877	231722547	+	0.0666667	NA	intron (NM_001164550, intron 4 of 4)	intron (NM_001164550, intron 4 of 4)	95397	NM_001164556	27185	Hs.13318	NM_018662	ENSG00000162946	DISC1	C1orf136|SCZD9	DISC1 scaffold protein	protein-coding
11.4333-5	chr8	30804261	30804479	+	0.0666667	NA	intron (NM_001009552, intron 1 of 6)	MER77B|LTR|ERVL	8448	NM_001009552	5516	Hs.491440	NM_004156	ENSG00000104695	PPP2CB	PP2Abeta|PP2CB	protein phosphatase 2 catalytic subunit beta	protein-coding
10.9-4	chr2	241162852	241163015	+	0.0666667	NA	intron (NM_001282413, intron 5 of 8)	AluY|SINE|Alu	12466	NM_002712	5510	Hs.36587	NM_002712	ENSG00000115685	PPP1R7	SDS22	protein phosphatase 1 regulatory subunit 7	protein-coding
20.9-10	chr2	69817693	69818098	+	0.0666667	NA	intron (NM_001320700, intron 9 of 12)	intron (NM_001320700, intron 9 of 12)	-11765	NM_178439	64395	Hs.293971	NM_178439	ENSG00000087338	GMCL1	BTBD13|GCL|GCL1|SPATA29	germ cell-less 1, spermatogenesis associated	protein-coding
15-4	chr17	56590895	56591226	+	0.0666667	NA	Intergenic	Intergenic	-2639	NM_005450	9241	Hs.248201	NM_005450	ENSG00000183691	NOG	SYM1|SYNS1|SYNS1A	noggin	protein-coding
24.3-12	chr4	5209615	5210278	+	0.0666667	NA	intron (NM_001306082, intron 4 of 12)	intron (NM_001306082, intron 4 of 12)	158466	NM_001345969	55351	Hs.133062	NM_018401	ENSG00000152953	STK32B	HSA250839|STK32|STKG6|YANK2	serine/threonine kinase 32B	protein-coding
5.06666	chr20	39405622	39405755	+	0.0666667	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-180940	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA
18.9333-3	chr11	126509096	126509662	+	0.0666667	NA	intron (NM_001301097, intron 4 of 15)	intron (NM_001301097, intron 4 of 15)	103292	NM_001254759	6484	Hs.591947	NM_006278	ENSG00000110080	ST3GAL4	CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S	ST3 beta-galactoside alpha-2,3-sialyltransferase 4	protein-coding
18.6333-5	chr1	244307819	244308280	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-44586	NM_001276348	200159	Hs.442703	NM_001012970	ENSG00000173728	C1orf100	-	chromosome 1 open reading frame 100	protein-coding
16.0333-14	chr5	35877652	35878019	+	0.0666667	NA	non-coding (NR_120485, exon 6 of 6)	non-coding (NR_120485, exon 6 of 6)	20944	NR_120485	3575	Hs.591742	NM_002185	ENSG00000168685	IL7R	CD127|CDW127|IL-7R-alpha|IL7RA|ILRA	interleukin 7 receptor	protein-coding
16.3333-8	chr2	107766043	107766409	+	0.0666667	NA	intron (NR_126370, intron 2 of 4)	intron (NR_126370, intron 2 of 4)	12114	NR_126369	104326057	Hs.585967	NR_126369	ENSG00000232991	GACAT1	LINC00876	gastric cancer associated transcript 1	ncRNA
23.4333-13	chr8	117707559	117708109	+	0.0666667	NA	Intergenic	Intergenic	187121	NM_080651	90390	Hs.492612	NM_080651	ENSG00000164758	MED30	MED30S|THRAP6|TRAP25	mediator complex subunit 30	protein-coding
31.6666-3	chr16	88878745	88879650	+	0.0666667	NA	intron (NM_175931, intron 10 of 10)	intron (NM_175931, intron 10 of 10)	-4318	NR_135194	101927793	Hs.690953	NR_135194	ENSG00000259881	LOC101927793	-	uncharacterized LOC101927793	ncRNA
14.4-5	chr10	86084381	86084759	+	0.0666667	NA	intron (NM_017551, intron 4 of 15)	L1MB3|LINE|L1	180218	NR_029907	442911		NR_029907	ENSG00000199104	MIR346	MIRN346|hsa-mir-346|miR-346|miRNA346	microRNA 346	ncRNA
13.1-8	chr6	10760044	10760322	+	0.0666667	NA	TTS (NM_001286488)	TTS (NM_001286488)	12378	NM_030969	81853	Hs.95600	NM_030969	ENSG00000137210	TMEM14B	-	transmembrane protein 14B	protein-coding
17-10	chr7	10177452	10177827	+	0.0666667	NA	Intergenic	Intergenic	-525037	NR_149037	100131472	Hs.170681	NR_149037		LOC100131472	-	uncharacterized LOC100131472	ncRNA
16.6-3	chr11	38142927	38143394	+	0.0666667	NA	Intergenic	L1MCa|LINE|L1	204559	NR_135110	105376633	Hs.135690	NR_135110	ENSG00000254516	LINC02760	-	long intergenic non-protein coding RNA 2760	ncRNA
26.4333-18	chr9	134650788	134651302	+	0.0666667	NA	intron (NR_138049, intron 1 of 1)	intron (NR_138049, intron 1 of 1)	1798	NR_138049	414316	Hs.571561	NR_138049	ENSG00000204011	COL5A1-AS1	C9orf104|bA54A22.4	COL5A1 antisense RNA 1	ncRNA
24.3-2	chr11	81517910	81518346	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	372708	NR_036186	100422823		NR_036186	ENSG00000264110	MIR4300	-	microRNA 4300	ncRNA
22.4333	chr1	115213835	115214434	+	0.0666667	NA	Intergenic	Intergenic	-68900	NR_157569	112840934		NR_157569		NGF-AS1	-	NGF antisense RNA 1	ncRNA
8.63333-4	chr2	137241501	137241744	+	0.0666667	NA	intron (NM_001316349, intron 9 of 27)	intron (NM_001316349, intron 9 of 27)	476077	NM_001316349	80731	Hs.68533	NM_001080427	ENSG00000144229	THSD7B	-	thrombospondin type 1 domain containing 7B	protein-coding
12.6667-3	chr2	30255709	30256015	+	0.0666667	NA	intron (NM_030915, intron 2 of 2)	intron (NM_030915, intron 2 of 2)	24328	NM_030915	81606	Hs.567598	NM_030915	ENSG00000213626	LBH	-	LBH regulator of WNT signaling pathway	protein-coding
14.6333-8	chr20	18640353	18640673	+	0.0666667	NA	intron (NM_080820, intron 4 of 5)	intron (NM_080820, intron 4 of 5)	52459	NM_080820	92675	Hs.659442	NM_080820	ENSG00000125821	DTD1	C20orf88|DTD|DUE-B|DUEB|HARS2|pqn-68	D-aminoacyl-tRNA deacylase 1	protein-coding
10.3-4	chr14	72352418	72352698	+	0.0666667	NA	intron (NM_001370288, intron 3 of 16)	intron (NM_001370288, intron 3 of 16)	-164262	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA
33.2-12	chr8	5734259	5735105	+	0.0666667	NA	Intergenic	Intergenic	671866	NR_040040	100287015	Hs.156928	NR_040040	ENSG00000246089	LOC100287015	-	uncharacterized LOC100287015	ncRNA
13.2333-7	chr3	4822982	4823276	+	0.0666667	NA	intron (NM_001168272, intron 59 of 60)	intron (NM_001168272, intron 59 of 60)	-71539	NR_004428	100126791	Hs.663059	NR_004428	ENSG00000235947	EGOT	EGO|NCRNA00190	eosinophil granule ontogeny transcript	ncRNA
9.56667-5	chrX	125952923	125953066	+	0.0666667	NA	Intergenic	L1MA7|LINE|L1	-156768	NR_110409	101928495	Hs.545998	NR_110409	ENSG00000237208	LOC101928495	-	uncharacterized LOC101928495	ncRNA
30.7666-2	chr8	110995476	110996276	+	0.0666667	NA	intron (NR_125416, intron 4 of 4)	L1M3|LINE|L1	31557	NR_125417	101927459	Hs.575543	NR_125416	ENSG00000253877	LINC01608	-	long intergenic non-protein coding RNA 1608	ncRNA
4.73334	chr4	40733846	40733918	+	0.0666667	NA	Intergenic	Intergenic	-16073	NM_024677	79730	Hs.479602	NM_024677	ENSG00000179299	NSUN7	-	NOP2/Sun RNA methyltransferase family member 7	protein-coding
25.2-14	chr3	12185652	12186122	+	0.0666667	NA	TTS (NM_003178)	TTS (NM_003178)	-26975	NM_003256	7079	Hs.591665	NM_003256	ENSG00000157150	TIMP4	TIMP-4	TIMP metallopeptidase inhibitor 4	protein-coding
11.4333-3	chr4	60214211	60214509	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-708259	NR_039652	100616450		NR_039652	ENSG00000265829	MIR548AG1	-	microRNA 548ag-1	ncRNA
14.3333-7	chr20	34878131	34878505	+	0.0666667	NA	intron (NM_001076552, intron 1 of 18)	MIRb|SINE|MIR	1706	NM_018677	55902	Hs.517034	NM_018677	ENSG00000131069	ACSS2	ACAS2|ACECS|ACS|ACSA|dJ1161H23.1	acyl-CoA synthetase short chain family member 2	protein-coding
13.5333-12	chr2	107643686	107643971	+	0.0666667	NA	Intergenic	L1MB1|LINE|L1	-110284	NR_126370	104326057	Hs.585967	NR_126369	ENSG00000232991	GACAT1	LINC00876	gastric cancer associated transcript 1	ncRNA
9.6-2	chr10	5675844	5676076	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-8878	NM_001321784	54906	Hs.610717	NM_017782	ENSG00000108021	TASOR2	C10orf18|FAM208B|bA318E3.2	transcription activation suppressor family member 2	protein-coding
33.2333-10	chr8	141643015	141643706	+	0.0666667	NA	Intergenic	Intergenic	-136130	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5 (gene/pseudogene)	protein-coding
25.8333-8	chr2	134162695	134163307	+	0.0666667	NA	intron (NM_001371457, intron 1 of 16)	intron (NM_001371457, intron 1 of 16)	35876	NR_037450	100500878		NR_037450	ENSG00000263813	MIR3679	mir-3679	microRNA 3679	ncRNA
31.3-2	chr1	232625620	232626330	+	0.0666667	NA	Intergenic	Intergenic	-92096	NR_146922	105373199	Hs.254475	NR_146922	ENSG00000225919	LINC01745	-	long intergenic non-protein coding RNA 1745	ncRNA
25.5-4	chr4	40997374	40997957	+	0.0666667	NA	intron (NM_004307, intron 6 of 17)	Charlie1a|DNA|hAT-Charlie	-140473	NM_001166053	323	Hs.479602	NM_004307	ENSG00000163697	APBB2	FE65L|FE65L1	amyloid beta precursor protein binding family B member 2	protein-coding
13.0667-3	chr11	72650231	72650549	+	0.0666667	NA	intron (NM_002599, intron 1 of 30)	intron (NM_002599, intron 1 of 30)	-7930	NM_001243784	5138	Hs.503163	NM_002599	ENSG00000186642	PDE2A	CGS-PDE|PDE2A1|PED2A4|cGSPDE	phosphodiesterase 2A	protein-coding
13.6333-10	chr4	180994475	180994679	+	0.0666667	NA	Intergenic	Intergenic	164572	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
23.5667-2	chr13	114274902	114275398	+	0.0666667	NA	Intergenic	Tigger1|DNA|TcMar-Tigger	1322	NR_039724	100616227		NR_039724	ENSG00000265450	MIR4502	-	microRNA 4502	ncRNA
28.4-11	chr4	115160217	115160902	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-46939	NM_022569	64579	Hs.591700	NM_022569	ENSG00000138653	NDST4	N-HSST|N-HSST 4|NDST-4|NHSST4	N-deacetylase and N-sulfotransferase 4	protein-coding
15.1667-7	chr2	180062174	180062456	+	0.0666667	NA	Intergenic	Intergenic	-55018	NM_020943	57703	Hs.311363	NM_020943	ENSG00000163510	CWC22	EIF4GL|NCM|fSAPb	CWC22 spliceosome associated protein homolog	protein-coding
15.4667-21	chr9	90649410	90649776	+	0.0666667	NA	Intergenic	MLT1A|LTR|ERVL-MaLR	-6769	NM_017594	54769	Hs.165636	NM_017594	ENSG00000165023	DIRAS2	Di-Ras2	DIRAS family GTPase 2	protein-coding
11.4667-4	chr18	71578643	71578922	+	0.0666667	NA	intron (NR_038326, intron 1 of 4)	LTR66|LTR|ERVL	174	NR_038325	100505776	Hs.202072	NR_038325	ENSG00000260676	LINC01541	UTAT39	long intergenic non-protein coding RNA 1541	ncRNA
12.6-6	chr10	109474752	109475112	+	0.0666667	NA	Intergenic	Intergenic	448314	NM_001324136	7511	Hs.390623	NM_020383	ENSG00000108039	XPNPEP1	APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1	X-prolyl aminopeptidase 1	protein-coding
8.03333-6	chr8	31323007	31323213	+	0.0666667	NA	Intergenic	Intergenic	-289754	NM_001015508	29942	Hs.373778	NM_013357	ENSG00000172733	PURG	PURG-A|PURG-B|PURGA|PURGB	purine rich element binding protein G	protein-coding
21.9-12	chr6	126155259	126155718	+	0.0666667	NA	Intergenic	MSTB-int|LTR|ERVL-MaLR	168948	NM_001031712	60487	Hs.404186	NM_021820	ENSG00000066651	TRMT11	C6orf75|MDS024|TRM11|TRMT11-1	tRNA methyltransferase 11 homolog	protein-coding
6.73333-2	chr2	189986926	189987052	+	0.0666667	NA	Intergenic	MLT1J-int|LTR|ERVL-MaLR	75740	NM_005259	2660	Hs.41565	NM_005259	ENSG00000138379	MSTN	GDF8|MSLHP	myostatin	protein-coding
18.3667-11	chr6	56258788	56259238	+	0.0666667	NA	intron (NM_001318752, intron 1 of 28)	MER103C|DNA|hAT-Charlie	-11433	NR_134849	81578	Hs.47629	NM_030820	ENSG00000124749	COL21A1	COLA1L|FP633	collagen type XXI alpha 1 chain	protein-coding
13.4333-5	chr3	5835590	5835885	+	0.0666667	NA	Intergenic	L1MA3|LINE|L1	-585482	NR_039953	100616334		NR_039953	ENSG00000265180	MIR4790	-	microRNA 4790	ncRNA
27.1-4	chr17	62817266	62817828	+	0.0666667	NA	intron (NR_135634, intron 1 of 1)	AluSz6|SINE|Alu	9045	NR_135634	101927877	Hs.434615	NR_135634	ENSG00000265000	MARCH10-DT	-	MARCH10 divergent transcript	ncRNA
7.53333-5	chrX	16547923	16548128	+	0.0666667	NA	Intergenic	Intergenic	79060	NR_039762	100616428		NR_039762	ENSG00000265144	MIR548AM	-	microRNA 548am	ncRNA
13.9333-3	chr10	30073856	30074214	+	0.0666667	NA	intron (NM_001350022, intron 1 of 4)	intron (NM_001350022, intron 1 of 4)	-14449	NM_001350001	57608	Hs.533953	NM_020848	ENSG00000165757	JCAD	KIAA1462	junctional cadherin 5 associated	protein-coding
7.46667-2	chr2	233720257	233720369	+	0.0666667	NA	intron (NM_007120, intron 1 of 4)	intron (NM_007120, intron 1 of 4)	1577	NM_007120	54657	Hs.554822	NM_007120	ENSG00000244474	UGT1A4	GNT1|HUG-BR2|UDPGT|UDPGT 1-4|UGT-1A|UGT-1D|UGT1|UGT1-01|UGT1-04|UGT1.1|UGT1.4|UGT1A|UGT1A1|UGT1A4S|UGT1D|hUG-BR1	UDP glucuronosyltransferase family 1 member A4	protein-coding
16.4-11	chr6	144776652	144777142	+	0.0666667	NA	intron (NM_007124, intron 59 of 73)	intron (NM_007124, intron 59 of 73)	371242	NR_132778	106635530		NR_132778		SNORA98	-	small nucleolar RNA, H/ACA box 98	snoRNA
10.8667-4	chr18	3272161	3272325	+	0.0666667	NA	intron (NM_001144945, intron 1 of 3)	MIRb|SINE|MIR	9524	NM_001144945	103910	Hs.190086	NM_033546	ENSG00000118680	MYL12B	MLC-B|MRLC2	myosin light chain 12B	protein-coding
15.9-6	chr17	67427584	67427946	+	0.0666667	NA	intron (NM_181671, intron 1 of 9)	intron (NM_181671, intron 1 of 9)	-43724	NR_037517	100500895		NR_037517	ENSG00000207688	MIR548AA2	-	microRNA 548aa-2	ncRNA
21.3333-2	chr12	129645157	129645598	+	0.0666667	NA	intron (NM_133448, intron 2 of 8)	LTR49|LTR|ERV1	258648	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding
14.7667-3	chr5	25756608	25757040	+	0.0666667	NA	Intergenic	L1PA5|LINE|L1	565871	NR_136209	105374693	Hs.628714	NR_136209		LINC02211	-	long intergenic non-protein coding RNA 2211	ncRNA
17.7333-20	chr9	8371291	8371713	+	0.0666667	NA	intron (NM_130392, intron 24 of 30)	intron (NM_130392, intron 24 of 30)	362444	NM_130391	5789	Hs.446083	NM_002839	ENSG00000153707	PTPRD	HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA	protein tyrosine phosphatase receptor type D	protein-coding
23.6667-8	chr3	170285509	170286025	+	0.0666667	NA	intron (NM_002740, intron 12 of 17)	AluSx|SINE|Alu	63343	NM_002740	5584	Hs.478199	NM_002740	ENSG00000163558	PRKCI	DXS1179E|PKCI|nPKC-iota	protein kinase C iota	protein-coding
29.8-4	chr19	19935749	19936295	+	0.0666667	NA	TTS (NM_031218)	TTS (NM_031218)	35076	NM_031218	81931	Hs.301059	NM_031218	ENSG00000184635	ZNF93	HPF34|HTF34|TF34|ZNF505	zinc finger protein 93	protein-coding
10.7-3	chr18	3462696	3462856	+	0.0666667	NA	Intergenic	Intergenic	-3474	NR_110428	100505592	Hs.635114	NR_110428	ENSG00000266835	GAPLINC	LINC01540	gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA	ncRNA
5.7	chr1	167959961	167960047	+	0.0666667	NA	intron (NM_001198957, intron 2 of 20)	L1MC1|LINE|L1	-22932	NM_001143674	25874	Hs.517768	NM_015415	ENSG00000143158	MPC2	BRP44|SLC54A2	mitochondrial pyruvate carrier 2	protein-coding
15.5333-10	chr9	76931905	76932329	+	0.0666667	NA	Intergenic	Intergenic	-26003	NM_015225	158471	Hs.262857	NM_015225	ENSG00000106772	PRUNE2	BMCC1|BNIPXL|C9orf65|KIAA0367	prune homolog 2 with BCH domain	protein-coding
17.4333-8	chr3	186271329	186271710	+	0.0666667	NA	intron (NM_001346, intron 11 of 24)	intron (NM_001346, intron 11 of 24)	90715	NM_001080744	1608	Hs.683449	NM_001346	ENSG00000058866	DGKG	DAGK3|DGK-GAMMA	diacylglycerol kinase gamma	protein-coding
25.8333-4	chr16	87845561	87846044	+	0.0666667	NA	intron (NM_003486, intron 2 of 9)	intron (NM_003486, intron 2 of 9)	-8094	NR_162122	113218509		NR_162122		MIR11401	-	microRNA 11401	ncRNA
26.1667-8	chr5	150844143	150844651	+	0.0666667	NA	Intergenic	Intergenic	-2124	NM_001346557	345611	Hs.519680	NM_001145805	ENSG00000237693	IRGM	IFI1|IRGM1|LRG-47|LRG47	immunity related GTPase M	protein-coding
17.0333-7	chr5	141565310	141565779	+	0.0666667	NA	TTS (NR_038333)	TTS (NR_038333)	7233	NR_038333	100505658	Hs.655458	NR_038333	ENSG00000246422	LOC100505658	-	uncharacterized LOC100505658	ncRNA
15.6333-3	chr10	104077401	104077720	+	0.0666667	NA	intron (NM_000494, intron 3 of 55)	intron (NM_000494, intron 3 of 55)	8320	NM_000494	1308	Hs.117938	NM_000494	ENSG00000065618	COL17A1	BA16H23.2|BP180|BPA-2|BPAG2|ERED|LAD-1	collagen type XVII alpha 1 chain	protein-coding
15.2667-14	chr9	81305980	81306301	+	0.0666667	NA	Intergenic	L4_A_Mam|LINE|RTE-X	383395	NM_001303103	7088	Hs.197320	NM_005077	ENSG00000196781	TLE1	ESG|ESG1|GRG1	TLE family member 1, transcriptional corepressor	protein-coding
15.1-14	chr8	21269718	21270030	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	-28365	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA
12.4-6	chr21	31290732	31291079	+	0.0666667	NA	intron (NM_001353686, intron 2 of 27)	intron (NM_001353686, intron 2 of 27)	53449	NM_001353687	7074	Hs.517228	NM_003253	ENSG00000156299	TIAM1	TIAM-1	T cell lymphoma invasion and metastasis 1	protein-coding
19.8666-3	chr19	52362020	52362614	+	0.0666667	NA	intron (NM_001161425, intron 5 of 5)	AluSx|SINE|Alu	-7606	NM_001145434	400713	Hs.502314	NM_001145434	ENSG00000221923	ZNF880	-	zinc finger protein 880	protein-coding
15.2-4	chr21	42026131	42026466	+	0.0666667	NA	Intergenic	MER54A|LTR|ERVL	4029	NR_027273	150142	Hs.143833	NM_198078	ENSG00000237232	ZNF295-AS1	C21orf121|NCRNA00318|PRED87	ZNF295 antisense RNA 1	ncRNA
18.8-10	chr3	117244898	117245220	+	0.0666667	NA	Intergenic	L1PA8|LINE|L1	323628	NR_121607	100506724	Hs.125983	NR_121607	ENSG00000242385	LINC00901	LSAMP-AS4|TCONS_00005428	long intergenic non-protein coding RNA 901	ncRNA
7.49999	chrX	80666322	80666545	+	0.0666667	NA	Intergenic	Intergenic	143444	NM_153252	254065	Hs.147027	NM_153252	ENSG00000165288	BRWD3	BRODL|MRX93	bromodomain and WD repeat domain containing 3	protein-coding
8.16667-4	chr22	19928113	19928235	+	0.0666667	NA	intron (NM_001352302, intron 2 of 17)	L1MD|LINE|L1	4379	NM_001352301	10587	Hs.443430	NM_006440	ENSG00000184470	TXNRD2	GCCD5|SELZ|TR|TR-BETA|TR3|TRXR2	thioredoxin reductase 2	protein-coding
18.2333	chr1	214044509	214044991	+	0.0666667	NA	Intergenic	Intergenic	56217	NM_002763	5629	Hs.741808	NM_002763	ENSG00000117707	PROX1	-	prospero homeobox 1	protein-coding
14.5333-12	chrUn_KI270519v1	92928	93237	+	0.0666667	NA	NA	ALR/Alpha|Satellite|centr	NA	NA								
22.4-8	chr17	40392032	40392582	+	0.0666667	NA	exon (NM_001067, exon 31 of 35)	exon (NM_001067, exon 31 of 35)	25589	NM_001067	7153	Hs.156346	NM_001067	ENSG00000131747	TOP2A	TOP2|TP2A	DNA topoisomerase II alpha	protein-coding
19-5	chr13	27274073	27274438	+	0.0666667	NA	TTS (NM_001331126)	TTS (NM_001331126)	3078	NM_001331126	387496	Hs.192131	NM_206827	ENSG00000122035	RASL11A	-	RAS like family 11 member A	protein-coding
19.8667-11	chr5	9526054	9526537	+	0.0666667	NA	intron (NM_003966, intron 1 of 22)	intron (NM_003966, intron 1 of 22)	14962	NR_109935	101929338	Hs.675861	NR_109935	ENSG00000251370	SEMA5A-AS1	CTD-2201E9.1	SEMA5A antisense RNA 1	ncRNA
9.36666	chr12	15762297	15762525	+	0.0666667	NA	intron (NM_004447, intron 1 of 20)	L1MA2|LINE|L1	26977	NM_004447	2059	Hs.591160	NM_004447	ENSG00000151491	EPS8	DFNB102	epidermal growth factor receptor pathway substrate 8	protein-coding
22.5333-19	chr8	23937303	23937797	+	0.0666667	NA	Intergenic	Intergenic	-82744	NM_003155	6781	Hs.25590	NM_003155	ENSG00000159167	STC1	STC	stanniocalcin 1	protein-coding
19.4-13	chr4	77676970	77677424	+	0.0666667	NA	Intergenic	LTR33|LTR|ERVL	141867	NM_001365007	246175	Hs.592519	NM_144571	ENSG00000138767	CNOT6L	CCR4b	CCR4-NOT transcription complex subunit 6 like	protein-coding
13.2333	chr12	10236246	10236526	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	-2575	NM_001351060	3824	Hs.562457	NM_002262	ENSG00000134539	KLRD1	CD94	killer cell lectin like receptor D1	protein-coding
25.8667-8	chr21	14107728	14108305	+	0.0666667	NA	TTS (NM_001302998)	TTS (NM_001302998)	98933	NM_198996	149998	Hs.139907	NM_145317	ENSG00000188992	LIPI	CT17|LPDL|PLA1C|PRED5|mPA-PLA1 beta	lipase I	protein-coding
12.7-4	chr20	48340829	48341138	+	0.0666667	NA	Intergenic	MER2|DNA|TcMar-Tigger	-18928	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA
4.73333	chr1	237668042	237668136	+	0.0666667	NA	intron (NM_001035, intron 58 of 104)	intron (NM_001035, intron 58 of 104)	-194086	NR_027247	100130331	Hs.661736	NR_027247	ENSG00000237250	LOC100130331	-	POTE ankyrin domain family, member F pseudogene	pseudo
13.8-5	chr5	141940430	141940733	+	0.0666667	NA	3' UTR (NM_001142603, exon 13 of 13)	3' UTR (NM_001142603, exon 13 of 13)	16710	NM_014773	9812	Hs.210532	NM_014773	ENSG00000081791	DELE1	DELE|KIAA0141	DAP3 binding cell death enhancer 1	protein-coding
10.7333-4	chr14	65943934	65944198	+	0.0666667	NA	Intergenic	L2c|LINE|L2	472964	NR_030355	693210		NR_030355	ENSG00000207781	MIR625	MIRN625|hsa-mir-625	microRNA 625	ncRNA
10.3667-5	chr2	94998990	94999288	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-26516	NM_022439	4118	Hs.80395	NM_002371	ENSG00000172005	MAL	MVP17|VIP17	mal, T cell differentiation protein	protein-coding
20.2667-11	chr8	120679265	120679614	+	0.0666667	NA	intron (NM_021021, intron 2 of 6)	intron (NM_021021, intron 2 of 6)	-81814	NR_125419	101927543	Hs.371902	NR_125419	ENSG00000248318	LOC101927543	-	uncharacterized LOC101927543	ncRNA
3.63333	chr13	76436188	76436243	+	0.0666667	NA	Intergenic	Intergenic	450190	NM_138444	115207	Hs.644125	NM_138444	ENSG00000178695	KCTD12	C13orf2|PFET1|PFETIN	potassium channel tetramerization domain containing 12	protein-coding
20.1333-6	chr16	87463057	87463409	+	0.0666667	NA	intron (NM_015144, intron 1 of 12)	AluJr|SINE|Alu	28621	NM_015144	23174	Hs.156231	NM_015144	ENSG00000140948	ZCCHC14	BDG-29|BDG29	zinc finger CCHC-type containing 14	protein-coding
19.3333-17	chr8	84248441	84248989	+	0.0666667	NA	intron (NM_001354320, intron 2 of 9)	intron (NM_001354320, intron 2 of 9)	64049	NM_001354321	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
31.8-3	chr11	79812900	79813675	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-372257	NM_001098816	26011	Hs.213087	NM_001098816	ENSG00000149256	TENM4	Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4	teneurin transmembrane protein 4	protein-coding
18.9-8	chr20	12887709	12888012	+	0.0666667	NA	intron (NR_109868, intron 10 of 11)	L2b|LINE|L2	49103	NR_109872	102606466	Hs.602196	NR_109872		LOC102606466	-	uncharacterized LOC102606466	ncRNA
21.7-14	chr5	55020241	55020796	+	0.0666667	NA	TTS (NR_104662)	TTS (NR_104662)	3651	NR_104662	102467081		NR_104662		LOC102467081	-	uncharacterized LOC102467081	ncRNA
15.1-10	chr5	31012220	31012625	+	0.0666667	NA	Intergenic	Intergenic	-181264	NM_004932	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
17.2-6	chr4	1581393	1581802	+	0.0666667	NA	Intergenic	AluSq2|SINE|Alu	102394	NM_001013622	152877	Hs.143314	NM_001013622	ENSG00000174137	FAM53A	DNTNP	family with sequence similarity 53 member A	protein-coding
17.0333-5	chr3	140922695	140923050	+	0.0666667	NA	Intergenic	Intergenic	-18964	NM_018155	55186	Hs.144130	NM_018155	ENSG00000114120	SLC25A36	PNC2	solute carrier family 25 member 36	protein-coding
23.7667-2	chr1	195272079	195272655	+	0.0666667	NA	Intergenic	Intergenic	816348	NR_146895	105371673		NR_146895		LINC01724	-	long intergenic non-protein coding RNA 1724	ncRNA
21.9-11	chr5	65856170	65856721	+	0.0666667	NA	Intergenic	Intergenic	-70109	NM_001006600	55914	Hs.591774	NM_018695	ENSG00000112851	ERBIN	ERBB2IP|HEL-S-78|LAP2	erbb2 interacting protein	protein-coding
33.6667-8	chr4	42727876	42728454	+	0.0666667	NA	Intergenic	L1MA7|LINE|L1	-71060	NM_006095	10396	Hs.435052	NM_006095	ENSG00000124406	ATP8A1	ATPASEII|ATPIA|ATPP2	ATPase phospholipid transporting 8A1	protein-coding
18.6333-14	chr5	28887614	28888013	+	0.0666667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-39057	NR_033961	729862	Hs.646006	NR_033961		LSP1P3	-	LSP1 pseudogene 3	pseudo
20.4667	chr1	44075909	44076378	+	0.0666667	NA	Intergenic	LTR16D2|LTR|ERVL	-42678	NM_173484	128209	Hs.567674	NM_173484	ENSG00000171872	KLF17	ZNF393|Zfp393	Kruppel like factor 17	protein-coding
18.1667-3	chr11	75108613	75109059	+	0.0666667	NA	Intergenic	Intergenic	-11946	NM_001005285	341152	Hs.554515	NM_001005285	ENSG00000171561	OR2AT4	OR11-265	olfactory receptor family 2 subfamily AT member 4	protein-coding
21.3-8	chr16	67257379	67257880	+	0.0666667	NA	intron (NM_001323973, intron 9 of 15)	intron (NM_001323973, intron 9 of 15)	8650	NR_136666	6553	Hs.439650	NM_004594	ENSG00000135740	SLC9A5	NHE5	solute carrier family 9 member A5	protein-coding
8.3	chr1	232579292	232579416	+	0.0666667	NA	Intergenic	Intergenic	-63746	NM_020808	57568	Hs.745009	NM_020808	ENSG00000116991	SIPA1L2	SPAL2|SPAR2	signal induced proliferation associated 1 like 2	protein-coding
23.9666-4	chr2	237478883	237479568	+	0.0666667	NA	Intergenic	Intergenic	-7185	NM_001281474	79083	Hs.102406	NM_024101	ENSG00000115648	MLPH	SLAC2-A	melanophilin	protein-coding
25.4333-13	chr7	103415022	103415518	+	0.0666667	NA	intron (NR_135802, intron 4 of 17)	L1MEd|LINE|L1	27941	NR_120443	375611	Hs.585146	NM_198999	ENSG00000170615	SLC26A5	DFNB61|PRES	solute carrier family 26 member 5	protein-coding
23.6667	chr1	105366581	105367036	+	0.0666667	NA	Intergenic	Intergenic	252127	NR_125954	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
21.8333-8	chr4	39490339	39490913	+	0.0666667	NA	Intergenic	Intergenic	10371	NR_026854	401127	Hs.383197	NR_026854	ENSG00000224097	LOC401127	-	WD repeat domain 5 pseudogene	pseudo
11.2667-5	chr8	134853677	134853996	+	0.0666667	NA	intron (NR_125427, intron 1 of 2)	intron (NR_125427, intron 1 of 2)	3901	NR_125427	101927845	Hs.559609	NR_125427	ENSG00000251218	LOC101927845	-	uncharacterized LOC101927845	ncRNA
11-2	chr12	120297750	120297995	+	0.0666667	NA	Intergenic	Intergenic	-4449	NM_012240	23409	Hs.50861	NM_012240	ENSG00000089163	SIRT4	SIR2L4	sirtuin 4	protein-coding
12.9333-3	chr12	88730509	88730824	+	0.0666667	NA	Intergenic	L1M5|LINE|L1	-150193	NM_003994	4254	Hs.1048	NM_000899	ENSG00000049130	KITLG	DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF	KIT ligand	protein-coding
9.13333-3	chr3	147786028	147786231	+	0.0666667	NA	Intergenic	L1MA5|LINE|L1	-292030	NR_134937	100507461	Hs.112623	NR_134937	ENSG00000241131	LINC02032	-	long intergenic non-protein coding RNA 2032	ncRNA
11.5-2	chr11	3831705	3831902	+	0.0666667	NA	intron (NM_001665, intron 1 of 1)	intron (NM_001665, intron 1 of 1)	9156	NM_001665	391	Hs.501728	NM_001665	ENSG00000177105	RHOG	ARHG	ras homolog family member G	protein-coding
11.3667-2	chr1	180164165	180164413	+	0.0666667	NA	intron (NM_002826, intron 1 of 11)	intron (NM_002826, intron 1 of 11)	9420	NM_002826	5768	Hs.719176	NM_002826	ENSG00000116260	QSOX1	Q6|QSCN6	quiescin sulfhydryl oxidase 1	protein-coding
8.93333-5	chr6	92562916	92563085	+	0.0666667	NA	Intergenic	L1MA4|LINE|L1	856559	NM_001288629	2045	Hs.73962	NM_004440	ENSG00000135333	EPHA7	EHK-3|EHK3|EK11|HEK11	EPH receptor A7	protein-coding
24.3-5	chr2	108985842	108986248	+	0.0666667	NA	intron (NM_022336, intron 1 of 11)	intron (NM_022336, intron 1 of 11)	3175	NM_022336	10913	Hs.171971	NM_022336	ENSG00000135960	EDAR	DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1	ectodysplasin A receptor	protein-coding
12.2333-3	chr10	111915894	111916242	+	0.0666667	NA	Intergenic	Intergenic	267697	NM_020918	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
27.2333-2	chr11	102267533	102268314	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-49561	NM_182962	330	Hs.127799	NM_001165	ENSG00000023445	BIRC3	AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2	baculoviral IAP repeat containing 3	protein-coding
19.9667-14	chr8	37522347	37522868	+	0.0666667	NA	Intergenic	L2b|LINE|L2	-1221	NR_121621	100507420	Hs.105962	NR_121620		LINC01605	LincDUSP	long intergenic non-protein coding RNA 1605	ncRNA
16.8333-6	chr20	8942286	8942680	+	0.0666667	NA	Intergenic	Intergenic	111298	NR_004386	26767		NR_004386	ENSG00000201348	RNU105B	105B|E1-2	RNA, U105B small nucleolar	snoRNA
4.16667	chr14	54995833	54995896	+	0.0666667	NA	intron (NM_007086, intron 10 of 25)	intron (NM_007086, intron 10 of 25)	31235	NM_001008396	11169	Hs.385998	NM_007086	ENSG00000198554	WDHD1	AND-1|AND1|CHTF4|CTF4	WD repeat and HMG-box DNA binding protein 1	protein-coding
23.0667-15	chr7	110639661	110640023	+	0.0666667	NA	Intergenic	Intergenic	-451164	NM_001099660	54674	Hs.3781	NM_018334	ENSG00000173114	LRRN3	FIGLER5|NLRR-3|NLRR3	leucine rich repeat neuronal 3	protein-coding
19.3-3	chr11	111598476	111599044	+	0.0666667	NA	Intergenic	Intergenic	-3689	NM_015191	23235	Hs.269128	NM_015191	ENSG00000170145	SIK2	LOH11CR1I|QIK|SIK-2|SNF1LK2	salt inducible kinase 2	protein-coding
15.3-5	chr22	35338657	35339110	+	0.0666667	NA	intron (NR_156428, intron 11 of 13)	MIRb|SINE|MIR	-2084	NR_106717	102464824		NR_106717	ENSG00000274280	MIR6069	hsa-mir-6069	microRNA 6069	ncRNA
7.4-7	chr9	20169919	20170030	+	0.0666667	NA	Intergenic	L1PB1|LINE|L1	241264	NR_039684	100616229		NR_039684	ENSG00000263790	MIR4473	-	microRNA 4473	ncRNA
12.1-5	chr14	37479656	37479902	+	0.0666667	NA	intron (NM_138731, intron 12 of 13)	L1MA7|LINE|L1	115470	NM_004496	3169	Hs.163484	NM_004496	ENSG00000129514	FOXA1	HNF3A|TCF3A	forkhead box A1	protein-coding
17.4333	chr11	87264220	87264740	+	0.0666667	NA	intron (NR_033149, intron 5 of 13)	intron (NR_033149, intron 5 of 13)	226546	NM_001168724	65084	Hs.188591	NM_022918	ENSG00000166575	TMEM135	PMP52	transmembrane protein 135	protein-coding
18.3667-13	chr7	38926061	38926516	+	0.0666667	NA	Intergenic	Intergenic	-17088	NM_080631	27072	Hs.592184	NM_014396	ENSG00000006715	VPS41	HVPS41|HVSP41|hVps41p	VPS41 subunit of HOPS complex	protein-coding
22.1666-2	chr8	25233392	25234009	+	0.0666667	NA	intron (NM_024940, intron 1 of 51)	intron (NM_024940, intron 1 of 51)	49011	NM_001322810	80005	Hs.195403	NM_024940	ENSG00000147459	DOCK5	-	dedicator of cytokinesis 5	protein-coding
23.4333-15	chr9	131182446	131183003	+	0.0666667	NA	intron (NM_001318324, intron 24 of 35)	L1MEc|LINE|L1	-7415	NM_001318325	8021	Hs.654530	NM_005085	ENSG00000126883	NUP214	CAIN|CAN	nucleoporin 214	protein-coding
13.1333-12	chr8	144506313	144506647	+	0.0666667	NA	intron (NM_005309, intron 8 of 10)	CpG-27821	2340	NM_005309	2875	Hs.103502	NM_005309	ENSG00000167701	GPT	AAT1|ALT1|GPT1	glutamic--pyruvic transaminase	protein-coding
15.3333-10	chr7	50925394	50925702	+	0.0666667	NA	Intergenic	MER58A|DNA|hAT-Charlie	-132095	NM_001371008								
26.9333-4	chr12	51752926	51753691	+	0.0666667	NA	intron (NM_001369788, intron 14 of 25)	intron (NM_001369788, intron 14 of 25)	78609	NM_001013690	401720	Hs.648218	NM_001013690	ENSG00000261308	FIGNL2	-	fidgetin like 2	protein-coding
8.06666-2	chr13	95157512	95157741	+	0.0666667	NA	intron (NM_001105515, intron 19 of 20)	intron (NM_001105515, intron 19 of 20)	-52718	NR_145733	109616987		NR_145733		SNORD13G	-	small nucleolar RNA, C/D box 13G	snoRNA
25.4-13	chr3	27553792	27554226	+	0.0666667	NA	Intergenic	L2|LINE|L2	-69625	NR_135543	9497	Hs.250072	NM_003615	ENSG00000033867	SLC4A7	NBC2|NBC3|NBCN1|SBC2|SLC4A6	solute carrier family 4 member 7	protein-coding
26.0666	chr10	30576054	30576815	+	0.0666667	NA	Intergenic	Intergenic	53319	NM_183058	119180	Hs.522610	NM_183058	ENSG00000151033	LYZL2	LYZD2	lysozyme like 2	protein-coding
9.53333-3	chr12	64817885	64818091	+	0.0666667	NA	intron (NM_001330188, intron 3 of 13)	AluSz|SINE|Alu	-6659	NM_015279	23329	Hs.192492	NM_015279	ENSG00000111490	TBC1D30	-	TBC1 domain family member 30	protein-coding
12.8333-6	chr16	9926178	9926529	+	0.0666667	NA	intron (NM_001134408, intron 3 of 13)	intron (NM_001134408, intron 3 of 13)	255714	NM_001134408	2903	Hs.411472	NM_000833	ENSG00000183454	GRIN2A	EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A	glutamate ionotropic receptor NMDA type subunit 2A	protein-coding
15.7333-12	chr5	76270280	76270662	+	0.0666667	NA	intron (NM_014979, intron 4 of 12)	intron (NM_014979, intron 4 of 12)	-132814	NM_006633	10788	Hs.291030	NM_006633	ENSG00000145703	IQGAP2	-	IQ motif containing GTPase activating protein 2	protein-coding
15-7	chr21	31737624	31737987	+	0.0666667	NA	Intergenic	Intergenic	-5687	NM_001145445	57466	Hs.17255	NM_020706	ENSG00000156304	SCAF4	SFRS15|SRA4	SR-related CTD associated factor 4	protein-coding
12.1-4	chr13	31183672	31184013	+	0.0666667	NA	Intergenic	Intergenic	-16133	NM_194318	145173	Hs.13205	NM_194318	ENSG00000187676	B3GLCT	B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T	beta 3-glucosyltransferase	protein-coding
18.8667-3	chr11	102290342	102290723	+	0.0666667	NA	Intergenic	MLT1A0|LTR|ERVL-MaLR	-26952	NM_182962	330	Hs.127799	NM_001165	ENSG00000023445	BIRC3	AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2	baculoviral IAP repeat containing 3	protein-coding
33.6666-2	chr11	99678537	99679384	+	0.0666667	NA	intron (NM_175566, intron 1 of 21)	intron (NM_175566, intron 1 of 21)	122815	NM_175566	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
32.6666-2	chr11	81358564	81359499	+	0.0666667	NA	Intergenic	Intergenic	531805	NR_036186	100422823		NR_036186	ENSG00000264110	MIR4300	-	microRNA 4300	ncRNA
32.8333-2	chr12	79896484	79897004	+	0.0666667	NA	intron (NM_001244990, intron 2 of 24)	intron (NM_001244990, intron 2 of 24)	17167	NM_001143886	4659	Hs.49582	NM_002480	ENSG00000058272	PPP1R12A	M130|MBS|MYPT1	protein phosphatase 1 regulatory subunit 12A	protein-coding
11-6	chr22	27431406	27431637	+	0.0666667	NA	Intergenic	Intergenic	120870	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LINC02554	-	long intergenic non-protein coding RNA 2554	ncRNA
19.6333-7	chr2	201944106	201944477	+	0.0666667	NA	Intergenic	MER39|LTR|ERV1	-90296	NM_003507	8324	Hs.173859	NM_003507	ENSG00000155760	FZD7	FzE3	frizzled class receptor 7	protein-coding
19.9333-3	chr1	189133917	189134436	+	0.0666667	NA	Intergenic	Intergenic	1341834	NM_001317188	339479	Hs.65765	NM_199051	ENSG00000162670	BRINP3	DBCCR1L|DBCCR1L1|FAM5C	BMP/retinoic acid inducible neural specific 3	protein-coding
24.6667-5	chr16	12393840	12394323	+	0.0666667	NA	intron (NM_032167, intron 16 of 20)	intron (NM_032167, intron 16 of 20)	-326240	NR_039869	100616195		NR_039869	ENSG00000264733	MIR4718	-	microRNA 4718	ncRNA
11.9-4	chr22	26889810	26890157	+	0.0666667	NA	Intergenic	Intergenic	-13309	NR_110540	101929539	Hs.517505	NR_110540	ENSG00000235271	LINC01422	-	long intergenic non-protein coding RNA 1422	ncRNA
6.33334-3	chr2	173008566	173008673	+	0.0666667	NA	intron (NM_001282901, intron 11 of 24)	intron (NM_001282901, intron 11 of 24)	-67227	NM_016653	51776	Hs.444451	NM_016653	ENSG00000091436	MAP3K20	AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk	mitogen-activated protein kinase kinase kinase 20	protein-coding
14.6333-14	chr7	109943955	109944288	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	16092	NR_003024	442720	Hs.530096	NR_003024	ENSG00000237064	EIF3IP1	RG208K23	eukaryotic translation initiation factor 3 subunit I pseudogene 1	pseudo
13.8667-5	chr18	4519689	4520041	+	0.0666667	NA	Intergenic	Intergenic	-64558	NM_004746	9229	Hs.594640	NM_004746	ENSG00000170579	DLGAP1	DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1	DLG associated protein 1	protein-coding
23.3-10	chr3	189358695	189359367	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-118437	NR_046722	100874027	Hs.616080	NR_046722	ENSG00000230115	TPRG1-AS2	-	TPRG1 antisense RNA 2	ncRNA
8.63333-3	chr2	9938406	9938637	+	0.0666667	NA	Intergenic	Intergenic	-13172	NM_198182	29841	Hs.418493	NM_198182	ENSG00000134317	GRHL1	LBP32|MGR|NH32|TFCP2L2	grainyhead like transcription factor 1	protein-coding
20.4667-10	chr5	164428712	164429208	+	0.0666667	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	38442	NR_105064	101927835	Hs.735171	NR_105064	ENSG00000253236	LINC02143	-	long intergenic non-protein coding RNA 2143	ncRNA
26.6667-10	chr9	72601125	72601802	+	0.0666667	NA	intron (NM_138691, intron 2 of 23)	AluSx1|SINE|Alu	79662	NM_138691	117531	Hs.670211	NM_138691	ENSG00000165091	TMC1	DFNA36|DFNB11|DFNB7	transmembrane channel like 1	protein-coding
16.0333-13	chr5	12333514	12333904	+	0.0666667	NA	Intergenic	L1PB1|LINE|L1	-241148	NR_033383	404663	Hs.552273	NR_033383		LINC01194	CT49|TAG	long intergenic non-protein coding RNA 1194	ncRNA
15.8333-6	chr12	23383266	23383598	+	0.0666667	NA	Intergenic	G-rich|Low_complexity|Low_complexity	201154	NM_178010	6660	Hs.434948	NM_006940	ENSG00000134532	SOX5	L-SOX5|L-SOX5B|L-SOX5F|LAMSHF	SRY-box transcription factor 5	protein-coding
13.3333-3	chr11	103282769	103283134	+	0.0666667	NA	intron (NM_001377, intron 72 of 88)	intron (NM_001377, intron 72 of 88)	173525	NM_001080463	79659	Hs.503721	NM_001377	ENSG00000187240	DYNC2H1	ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11	dynein cytoplasmic 2 heavy chain 1	protein-coding
34.4333-12	chr3	5234492	5235081	+	0.0666667	NA	Intergenic	Intergenic	15469	NR_039953	100616334		NR_039953	ENSG00000265180	MIR4790	-	microRNA 4790	ncRNA
12.7333-2	chr1	163187336	163187624	+	0.0666667	NA	intron (NM_001254748, intron 2 of 5)	MER21C|LTR|ERVL	15436	NM_001254749	8490	Hs.24950	NM_003617	ENSG00000143248	RGS5	MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129	regulator of G protein signaling 5	protein-coding
5.96666-2	chr7	7037344	7037519	+	0.0666667	NA	Intergenic	Intergenic	29614	NR_037454	100500886		NR_037454	ENSG00000266287	MIR3683	-	microRNA 3683	ncRNA
14.2333-3	chr1	235933942	235934298	+	0.0666667	NA	Intergenic	Intergenic	-50407	NR_102436	1130	Hs.532411	NM_000081	ENSG00000143669	LYST	CHS|CHS1	lysosomal trafficking regulator	protein-coding
16.8-10	chr8	102767340	102767754	+	0.0666667	NA	Intergenic	Intergenic	-39275	NR_149020	401472		NR_149020		GASAL1	GASL1	growth arrest associated lncRNA 1	ncRNA
3.4	chr12	2847863	2847914	+	0.0666667	NA	intron (NR_147202, intron 14 of 15)	L1MB4|LINE|L1	9151	NR_157835	101929469	Hs.634625	NM_001365174	ENSG00000283297	TEX52	-	testis expressed 52	protein-coding
17-4	chr3	64499592	64499870	+	0.0666667	NA	Intergenic	Intergenic	-61615	NR_110150	101929335	Hs.476604	NR_110150	ENSG00000241158	ADAMTS9-AS1	-	ADAMTS9 antisense RNA 1	ncRNA
11.9-3	chr20	4494944	4495188	+	0.0666667	NA	Intergenic	LTR33C|LTR|ERVL	-191390	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding
16.1	chr1	182700609	182701056	+	0.0666667	NA	Intergenic	Intergenic	-12030	NR_146548	105371644	Hs.496952	NR_146548	ENSG00000227181	LINC01688	-	long intergenic non-protein coding RNA 1688	ncRNA
27-24	chrX	131221090	131221698	+	0.0666667	NA	Intergenic	Intergenic	67667	NM_001170963	3547	Hs.22111	NM_001555	ENSG00000147255	IGSF1	CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120	immunoglobulin superfamily member 1	protein-coding
16.2667-6	chr20	49351876	49352347	+	0.0666667	NA	Intergenic	L2a|LINE|L2	71428	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	small nucleolar RNA, C/D box 12	snoRNA
15.8667-11	chr9	95978740	95979128	+	0.0666667	NA	intron (NM_020207, intron 17 of 18)	intron (NM_020207, intron 17 of 18)	42877	NR_024129	100188953	Hs.434310	NR_024129	ENSG00000225194	LINC00092	NCRNA00092	long intergenic non-protein coding RNA 92	ncRNA
22.4-21	chrX	138708387	138709038	+	0.0666667	NA	intron (NM_033642, intron 2 of 4)	intron (NM_033642, intron 2 of 4)	3005	NM_004114	2258	Hs.6540	NM_004114	ENSG00000129682	FGF13	FGF-13|FGF2|FHF-2|FHF2|LINC00889	fibroblast growth factor 13	protein-coding
10.4-14	chrX	4647144	4647367	+	0.0666667	NA	Intergenic	MER20|DNA|hAT-Charlie	-13683	NR_110390	101928201	Hs.586488	NR_110390	ENSG00000236513	LOC101928201	-	uncharacterized LOC101928201	ncRNA
35.3667	chr12	86850487	86851017	+	0.0666667	NA	Intergenic	Intergenic	-11752	NM_013244	25834	Hs.589093	NM_013244	ENSG00000182050	MGAT4C	GNTIVH|HGNT-IV-H	MGAT4 family member C	protein-coding
13.1333-7	chr2	223738072	223738437	+	0.0666667	NA	Intergenic	Intergenic	99328	NM_001039569	130340	Hs.632555	NM_178814	ENSG00000152056	AP1S3	PSORS15	adaptor related protein complex 1 subunit sigma 3	protein-coding
8.4-2	chr11	114153243	114153457	+	0.0666667	NA	intron (NM_006006, intron 2 of 6)	intron (NM_006006, intron 2 of 6)	90139	NM_001354752	7704	Hs.591945	NM_006006	ENSG00000109906	ZBTB16	PLZF|ZNF145	zinc finger and BTB domain containing 16	protein-coding
23.1333-3	chr2	72052415	72053029	+	0.0666667	NA	Intergenic	L1M5|LINE|L1	95140	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
16.0333-10	chr3	15646033	15646441	+	0.0666667	NA	3' UTR (NM_001281724, exon 6 of 6)	3' UTR (NM_001281724, exon 6 of 6)	44268	NM_001281725	686	Hs.444197	NM_001281723	ENSG00000169814	BTD	-	biotinidase	protein-coding
16.4333-6	chr6	130594301	130594642	+	0.0666667	NA	Intergenic	Intergenic	157354	NM_052913	114801	Hs.591341	NM_052913	ENSG00000164484	TMEM200A	KIAA1913|TTMA|TTMC	transmembrane protein 200A	protein-coding
23.2667-6	chr20	63835145	63835670	+	0.0666667	NA	Intergenic	Intergenic	-4143	NM_001369741	140685	Hs.585028	NM_025224	ENSG00000130584	ZBTB46	BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8	zinc finger and BTB domain containing 46	protein-coding
10.3667-7	chr20	22759683	22759935	+	0.0666667	NA	Intergenic	L1PA17|LINE|L1	-74465	NR_146527	105372566	Hs.555065	NR_146527		LINC01747	-	long intergenic non-protein coding RNA 1747	ncRNA
16.6333-2	chr16	19334034	19334377	+	0.0666667	NA	Intergenic	Intergenic	48474	NM_001256720	728276	Hs.632180	NM_001256720	ENSG00000261210	CLEC19A	-	C-type lectin domain containing 19A	protein-coding
25-5	chr18	52770173	52770691	+	0.0666667	NA	intron (NM_005215, intron 2 of 28)	L2c|LINE|L2	430235	NM_005215	1630	Hs.162025	NM_005215	ENSG00000187323	DCC	CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1	DCC netrin 1 receptor	protein-coding
17.5-10	chr3	101345819	101346334	+	0.0666667	NA	intron (NM_020654, intron 13 of 23)	L1PB1|LINE|L1	-25501	NM_016247	50939	Hs.209249	NM_016247	ENSG00000081148	IMPG2	IPM200|RP56|SPACRCAN|VMD5	interphotoreceptor matrix proteoglycan 2	protein-coding
10.9-2	chr13	50994945	50995256	+	0.0666667	NA	intron (NR_003923, intron 16 of 16)	intron (NR_003923, intron 16 of 16)	71057	NR_003923	2974	Hs.411573	NM_004129	ENSG00000123201	GUCY1B2	GC-SB2	guanylate cyclase 1 soluble subunit beta 2 (pseudogene)	pseudo
19.9333-20	chr8	131197303	131197623	+	0.0666667	NA	Intergenic	L1MEf|LINE|L1	-156554	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
24.6-4	chr16	78098532	78098933	+	0.0666667	NA	promoter-TSS (NM_016373)	promoter-TSS (NM_016373)	-922	NM_130791	51741	Hs.461453	NM_016373	ENSG00000186153	WWOX	D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1	WW domain containing oxidoreductase	protein-coding
15.7667-2	chr13	43642336	43642722	+	0.0666667	NA	intron (NM_001347964, intron 2 of 17)	intron (NM_001347964, intron 2 of 17)	-13052	NM_001127615	55068	Hs.128258	NM_017993	ENSG00000120658	ENOX1	CNOX|PIG38|bA64J21.1|cCNOX	ecto-NOX disulfide-thiol exchanger 1	protein-coding
27.1333-2	chr1	188848418	188849179	+	0.0666667	NA	Intergenic	Intergenic	1405170	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
21.1667-9	chr3	76347144	76347579	+	0.0666667	NA	Intergenic	Intergenic	-561812	NM_001324026	100131827	Hs.556877	NM_001128223	ENSG00000227124	ZNF717	OB1|X17|ZNF838	zinc finger protein 717	protein-coding
20.1667-11	chr3	83814846	83815334	+	0.0666667	NA	Intergenic	Intergenic	1054485	NR_033860	440970	Hs.411049	NR_033860	ENSG00000242641	LINC00971	-	long intergenic non-protein coding RNA 971	ncRNA
7.09999-2	chrX	85918346	85918552	+	0.0666667	NA	intron (NM_001320959, intron 8 of 14)	L1PA14|LINE|L1	-14742	NR_029848	494323		NR_029848	ENSG00000199051	MIR361	MIRN361|hsa-mir-361|mir-361	microRNA 361	ncRNA
10.1667-2	chr12	33704620	33704772	+	0.0666667	NA	Intergenic	Intergenic	-264877	NM_198992	341359	Hs.118703	NM_198992	ENSG00000110975	SYT10	-	synaptotagmin 10	protein-coding
27-18	chr3	80620592	80621166	+	0.0666667	NA	Intergenic	Intergenic	-144018	NR_147143	105377175	Hs.180696	NR_147143	ENSG00000242781	LINC02050	-	long intergenic non-protein coding RNA 2050	ncRNA
22.1333	chr1	4596661	4597233	+	0.0666667	NA	Intergenic	Intergenic	25460	NR_147025	105376679		NR_147025	ENSG00000232596	LINC01646	-	long intergenic non-protein coding RNA 1646	ncRNA
15.5667-12	chr7	88304516	88304889	+	0.0666667	NA	intron (NM_001205315, intron 1 of 5)	intron (NM_001205315, intron 1 of 5)	2192	NM_024636	79689	Hs.521008	NM_024636	ENSG00000127954	STEAP4	STAMP2|SchLAH|TIARP|TNFAIP9	STEAP4 metalloreductase	protein-coding
9.29999	chr10	126124386	126124640	+	0.0666667	NA	intron (NM_001288974, intron 5 of 18)	intron (NM_001288974, intron 5 of 18)	-151240	NR_102707	101410540	Hs.557889	NR_102707	ENSG00000233409	FANK1-AS1	-	FANK1 antisense RNA 1	ncRNA
17.6-8	chr18	6433492	6433933	+	0.0666667	NA	Intergenic	Intergenic	-18453	NM_001365765	91133	Hs.128279	NM_173464	ENSG00000154655	L3MBTL4	HsT1031	L3MBTL histone methyl-lysine binding protein 4	protein-coding
17.7667-7	chr2	163967086	163967606	+	0.0666667	NA	Intergenic	Intergenic	-231338	NM_018086	55137	Hs.593650	NM_018086	ENSG00000182263	FIGN	-	fidgetin, microtubule severing factor	protein-coding
15.8-5	chr14	57984735	57985027	+	0.0666667	NA	Intergenic	Intergenic	-118789	NM_001352011	341880	Hs.28280	NM_001080455	ENSG00000151812	SLC35F4	C14orf36|c14_5373	solute carrier family 35 member F4	protein-coding
12.4333	chr10	107262447	107262724	+	0.0666667	NA	Intergenic	AluY|SINE|Alu	-97879	NM_001206570	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
7.4	chr10	130895706	130895834	+	0.0666667	NA	Intergenic	Intergenic	66898	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA
23.1-14	chr4	2933353	2933811	+	0.0666667	NA	exon (NM_001120, exon 2 of 12)	exon (NM_001120, exon 2 of 12)	655	NM_001120	10227	Hs.632581	NM_001120	ENSG00000109736	MFSD10	TETRAN|TETTRAN	major facilitator superfamily domain containing 10	protein-coding
13.6-7	chr8	143289200	143289485	+	0.0666667	NA	Intergenic	CpG	-2075	NM_030895	79943	Hs.512740	NM_030895	ENSG00000185730	ZNF696	-	zinc finger protein 696	protein-coding
20.7333-2	chr1	239011652	239012113	+	0.0666667	NA	Intergenic	Intergenic	-374686	NM_001347716	1131	Hs.7138	NM_000740	ENSG00000133019	CHRM3	EGBRS|HM3|PBS	cholinergic receptor muscarinic 3	protein-coding
13.5333-3	chr1	211083266	211083656	+	0.0666667	NA	intron (NM_002238, intron 4 of 10)	intron (NM_002238, intron 4 of 10)	49913	NR_046784	100874296	Hs.737764	NR_046784		KCNH1-IT1	-	KCNH1 intronic transcript 1	ncRNA
23.6333-5	chr16	54432615	54433292	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-62254	NR_134923	100996345	Hs.112680	NR_134922	ENSG00000261803	LINC02140	-	long intergenic non-protein coding RNA 2140	ncRNA
22.3667-3	chr10	106586233	106586665	+	0.0666667	NA	intron (NM_001206569, intron 24 of 25)	intron (NM_001206569, intron 24 of 25)	446284	NR_134329	105378470	Hs.142910	NR_134329	ENSG00000229775	LINC02624	-	long intergenic non-protein coding RNA 2624	ncRNA
9.4-2	chr11	35566403	35566612	+	0.0666667	NA	Intergenic	Intergenic	-36207	NM_001282675	25891	Hs.55044	NM_015430	ENSG00000149090	PAMR1	DKFZP586H2123|FP938|RAMP	peptidase domain containing associated with muscle regeneration 1	protein-coding
11.0333-2	chr21	30734823	30735041	+	0.0666667	NA	Intergenic	L1ME3G|LINE|L1	12327	NM_181617	337978	Hs.553699	NM_181617	ENSG00000187026	KRTAP21-2	KAP21.2	keratin associated protein 21-2	protein-coding
24.3667-9	chr4	141797103	141797560	+	0.0666667	NA	Intergenic	L1MC1|LINE|L1	160748	NM_172175	3600	Hs.168132	NM_000585	ENSG00000164136	IL15	IL-15	interleukin 15	protein-coding
20.0667-3	chr10	31132714	31133269	+	0.0666667	NA	Intergenic	Intergenic	-54892	NR_134478	101929352	Hs.209289	NR_134478		LINC02664	-	long intergenic non-protein coding RNA 2664	ncRNA
18.1667-9	chr3	88965472	88965860	+	0.0666667	NA	Intergenic	MamSINE1|SINE|tRNA-RTE	-141955	NM_005233	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
26.9-7	chr16	77723897	77724424	+	0.0666667	NA	intron (NM_001243660, intron 1 of 3)	MLT1C|LTR|ERVL-MaLR	1646	NM_001105663	283927	Hs.282665	NM_001105663	ENSG00000140876	NUDT7	-	nudix hydrolase 7	protein-coding
27.1-9	chr4	107694064	107694486	+	0.0666667	NA	intron (NM_005443, intron 2 of 11)	AluJo|SINE|Alu	25959	NM_005443	9061	Hs.368610	NM_005443	ENSG00000138801	PAPSS1	ATPSK1|PAPSS|SK1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	protein-coding
18.5333-21	chr8	76559398	76559819	+	0.0666667	NA	Intergenic	Intergenic	-121639	NM_024721	79776	Hs.458973	NM_024721	ENSG00000091656	ZFHX4	ZFH4|ZHF4	zinc finger homeobox 4	protein-coding
21.5333-3	chr16	69055701	69056203	+	0.0666667	NA	intron (NM_024562, intron 17 of 17)	AluSq2|SINE|Alu	-49701	NM_001199280	3038	Hs.592069	NM_005329	ENSG00000103044	HAS3	-	hyaluronan synthase 3	protein-coding
21.7333-6	chr2	121425564	121426036	+	0.0666667	NA	intron (NM_001207051, intron 21 of 37)	L1MEi|LINE|L1	-105080	NR_023343	100151683	Hs.689638	NR_023343	ENSG00000264229	RNU4ATAC	MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC	RNA, U4atac small nuclear (U12-dependent splicing)	snRNA
19-22	chr8	65038733	65039152	+	0.0666667	NA	Intergenic	Intergenic	141398	NR_038901	552859	Hs.156997	NR_038901	ENSG00000280725	LINC00251	C8orf25|NCRNA00251	long intergenic non-protein coding RNA 251	ncRNA
10.8-7	chr8	132582291	132582453	+	0.0666667	NA	intron (NR_073525, intron 11 of 12)	intron (NR_073525, intron 11 of 12)	-20893	NR_026684	93668	Hs.545218	NR_026684	ENSG00000253521	HPYR1	HPRG1|LINC00027|NCRNA00027	Helicobacter pylori responsive 1	ncRNA
9.6-5	chr20	63212529	63212730	+	0.0666667	NA	intron (NM_017798, intron 3 of 4)	intron (NM_017798, intron 3 of 4)	3502	NM_017798	54915	Hs.744852	NM_017798	ENSG00000149658	YTHDF1	C20orf21	YTH N6-methyladenosine RNA binding protein 1	protein-coding
22.5333-11	chr21	31555393	31555829	+	0.0666667	NA	intron (NM_003253, intron 1 of 28)	intron (NM_003253, intron 1 of 28)	3476	NM_001353688	7074	Hs.517228	NM_003253	ENSG00000156299	TIAM1	TIAM-1	T cell lymphoma invasion and metastasis 1	protein-coding
15.1333-5	chr12	52599269	52599654	+	0.0666667	NA	intron (NM_080747, intron 1 of 8)	intron (NM_080747, intron 1 of 8)	2002	NM_080747	140807	Hs.662013	NM_080747	ENSG00000170486	KRT72	K6IRS2|K6irs|KRT6|KRT6IRS2	keratin 72	protein-coding
13.7333-3	chr19	37621547	37621895	+	0.0666667	NA	Intergenic	L1M2|LINE|L1	26845	NM_001172226	163255	Hs.728927	NM_152606	ENSG00000171817	ZNF540	Nbla10512	zinc finger protein 540	protein-coding
16.3667-4	chr20	5622082	5622391	+	0.0666667	NA	Intergenic	Intergenic	-11230	NM_019593	56261	Hs.636359	NM_019593	ENSG00000125772	GPCPD1	EDI3|GDE5|GDPD6|PREI4	glycerophosphocholine phosphodiesterase 1	protein-coding
16.6333-12	chr8	119623085	119623360	+	0.0666667	NA	intron (NM_001330600, intron 3 of 25)	AluSx3|SINE|Alu	15617	NM_006209	5168	Hs.190977	NM_006209	ENSG00000136960	ENPP2	ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2	ectonucleotide pyrophosphatase/phosphodiesterase 2	protein-coding
12.3667-3	chr2	99589855	99590085	+	0.0666667	NA	intron (NM_001025108, intron 14 of 23)	MER45C|DNA|hAT-Tip100	-99953	NR_135650	51455	Hs.443077	NM_016316	ENSG00000135945	REV1	AIBP80|REV1L	REV1 DNA directed polymerase	protein-coding
20.1333-5	chr15	27385029	27385592	+	0.0666667	NA	intron (NM_001270873, intron 5 of 5)	L1M4a1|LINE|L1	-223991	NR_120343	101928869	Hs.585699	NR_120343	ENSG00000228740	GABRG3-AS1	-	GABRG3 antisense RNA 1	ncRNA
17.5-4	chr12	100275783	100276227	+	0.0666667	NA	intron (NM_017988, intron 1 of 17)	L1MEc|LINE|L1	8621	NM_001330253	55681	Hs.506481	NM_017988	ENSG00000136021	SCYL2	CVAK104	SCY1 like pseudokinase 2	protein-coding
11.2	chr1	42688918	42689135	+	0.0666667	NA	intron (NM_004559, intron 2 of 7)	Tigger2b_Pri|DNA|TcMar-Tigger	5890	NR_132737	4904	Hs.473583	NM_004559	ENSG00000065978	YBX1	BP-8|CBF-A|CSDA2|CSDB|DBPB|EFI-A|MDR-NF1|NSEP-1|NSEP1|YB-1|YB1	Y-box binding protein 1	protein-coding
22.7667-10	chr21	35265469	35266050	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	-216461	NM_001754	861	Hs.149261	NM_001754	ENSG00000159216	RUNX1	AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha	RUNX family transcription factor 1	protein-coding
13.5333-8	chr19	17805324	17805543	+	0.0666667	NA	intron (NM_014256, intron 1 of 2)	L2b|LINE|L2	10295	NM_014256	10331	Hs.69009	NM_014256	ENSG00000179913	B3GNT3	B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3	protein-coding
7.66667-2	chr6	27179648	27179810	+	0.0666667	NA	Intergenic	HERVIP10B3-int|LTR|ERV1	32103	NR_036096	100422934		NR_036096	ENSG00000265565	MIR3143	mir-3143	microRNA 3143	ncRNA
18.8333-6	chr15	57284553	57285017	+	0.0666667	NA	intron (NM_001322157, intron 19 of 19)	intron (NM_001322157, intron 19 of 19)	-6128	NR_145748	109616990		NR_145748	ENSG00000239035	SNORD13D	-	small nucleolar RNA, C/D box 13D	snoRNA
13.5667-2	chr2	58309284	58309681	+	0.0666667	NA	Intergenic	Intergenic	33605	NR_147010	105374744	Hs.447687	NR_147010	ENSG00000225226	LINC01795	-	long intergenic non-protein coding RNA 1795	ncRNA
19.8667-2	chr1	155186374	155186810	+	0.0666667	NA	intron (NM_001018017, intron 7 of 7)	intron (NM_001018017, intron 7 of 7)	6317	NM_001204285	4582	Hs.89603	NM_002456	ENSG00000185499	MUC1	ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM	mucin 1, cell surface associated	protein-coding
19.1-2	chr1	113122769	113123230	+	0.0666667	NA	intron (NM_014813, intron 17 of 17)	intron (NM_014813, intron 17 of 17)	49801	NM_001312686	9860	Hs.448972	NM_014813	ENSG00000198799	LRIG2	LIG-2|LIG2|UFS2	leucine rich repeats and immunoglobulin like domains 2	protein-coding
16.1667-2	chr1	214430307	214430626	+	0.0666667	NA	intron (NM_005401, intron 3 of 18)	MLT2D|LTR|ERVL	121136	NM_005401	5784	Hs.193557	NM_005401	ENSG00000152104	PTPN14	CATLPH|PEZ|PTP36	protein tyrosine phosphatase non-receptor type 14	protein-coding
16.5667-5	chr2	184162788	184163184	+	0.0666667	NA	Intergenic	Intergenic	-215989	NR_039638	100616305		NR_039638	ENSG00000266808	MIR548AE1	-	microRNA 548ae-1	ncRNA
20.6333-13	chr8	30141232	30141815	+	0.0666667	NA	intron (NM_001100916, intron 1 of 2)	AluSx1|SINE|Alu	3142	NM_001100916	619373	Hs.627194	NM_001100916	ENSG00000177669	MBOAT4	FKSG89|GOAT|OACT4	membrane bound O-acyltransferase domain containing 4	protein-coding
21.3-2	chr1	246754123	246754652	+	0.0666667	NA	intron (NM_016002, intron 5 of 11)	HERVIP10B3-int|LTR|ERV1	29978	NM_016002	51097	Hs.498397	NM_016002	ENSG00000143653	SCCPDH	CGI-49|NET11	saccharopine dehydrogenase (putative)	protein-coding
18.1667-11	chr7	97185806	97186138	+	0.0666667	NA	Intergenic	AluSz6|SINE|Alu	69379	NM_020186	57001	Hs.592269	NM_020186	ENSG00000196636	SDHAF3	ACN9|DC11|LYRM10|Sdh7	succinate dehydrogenase complex assembly factor 3	protein-coding
24.0667-10	chr7	138772889	138773332	+	0.0666667	NA	intron (NM_130840, intron 1 of 20)	intron (NM_130840, intron 1 of 20)	927	NM_130841	50617	Hs.98967	NM_020632	ENSG00000105929	ATP6V0A4	A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2	ATPase H+ transporting V0 subunit a4	protein-coding
24.3667-7	chr3	35727743	35728144	+	0.0666667	NA	intron (NM_016300, intron 14 of 19)	intron (NM_016300, intron 14 of 19)	-16533	NR_029824	406916		NR_029824	ENSG00000207625	MIR128-2	MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b	microRNA 128-2	ncRNA
27.5-3	chr15	27701537	27702235	+	0.0666667	NA	Intergenic	L1MA4A|LINE|L1	397429	NM_000275	4948	Hs.654411	NM_000275	ENSG00000104044	OCA2	BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1	OCA2 melanosomal transmembrane protein	protein-coding
20.9333-5	chr14	40253461	40254003	+	0.0666667	NA	Intergenic	L1M1|LINE|L1	-700979	NR_109757	644919	Hs.434414	NR_109757		LINC02315	-	long intergenic non-protein coding RNA 2315	ncRNA
10.6333	chr1	98510308	98510603	+	0.0666667	NA	Intergenic	L1MA4|LINE|L1	-151266	NM_015976	51375	Hs.197015	NM_015976	ENSG00000162627	SNX7	-	sorting nexin 7	protein-coding
17.1-21	chr9	4139456	4139747	+	0.0666667	NA	intron (NM_001042413, intron 2 of 10)	MER1B|DNA|hAT-Charlie	12582	NM_152629	169792	Hs.162125	NM_152629	ENSG00000107249	GLIS3	NDH|ZNF515	GLIS family zinc finger 3	protein-coding
12.5667-3	chr12	97486754	97487024	+	0.0666667	NA	intron (NR_024037, intron 2 of 8)	intron (NR_024037, intron 2 of 8)	-5020	NR_031653	100302289		NR_031653	ENSG00000221479	MIR1251	MIRN1251|hsa-mir-1251	microRNA 1251	ncRNA
10.8667-7	chr7	67875600	67875913	+	0.0666667	NA	Intergenic	Intergenic	-144497	NR_120514	102723427	Hs.583491	NR_120514	ENSG00000225209	LOC102723427	-	uncharacterized LOC102723427	ncRNA
13.2333-5	chr2	36153883	36154154	+	0.0666667	NA	Intergenic	Intergenic	201552	NR_037631	100288911	Hs.432924	NR_037631		CRIM1-DT	-	CRIM1 divergent transcript	ncRNA
16.7667-6	chr22	34775857	34776241	+	0.0666667	NA	intron (NR_138042, intron 3 of 4)	intron (NR_138042, intron 3 of 4)	221867	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
17.4667-4	chr11	126605872	126606293	+	0.0666667	NA	intron (NM_001301097, intron 1 of 15)	MIR|SINE|MIR	-46696	NR_120532	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA
5.7-3	chr5	141121118	141121263	+	0.0666667	NA	promoter-TSS (NM_018938)	promoter-TSS (NM_018938)	-628	NM_018938	56131	Hs.591250	NM_018938	ENSG00000081818	PCDHB4	PCDH-BETA4	protocadherin beta 4	protein-coding
23.3667-3	chr12	28828702	28829092	+	0.0666667	NA	Intergenic	L1MEc|LINE|L1	-320381	NM_001271783	55711	Hs.684482	NM_018099	ENSG00000064763	FAR2	HEL-S-81|MLSTD1|SDR10E2	fatty acyl-CoA reductase 2	protein-coding
10.7-10	chr9	29300139	29300301	+	0.0666667	NA	Intergenic	L1ME4a|LINE|L1	-86619	NM_001258282	158038	Hs.444665	NM_152570	ENSG00000174482	LINGO2	LERN3|LRRN6C	leucine rich repeat and Ig domain containing 2	protein-coding
13.3667-5	chr14	71407110	71407414	+	0.0666667	NA	intron (NM_001354285, intron 2 of 24)	intron (NM_001354285, intron 2 of 24)	8925	NR_001276	319139		NR_001276	ENSG00000207444	SNORD56B	RNU56B	small nucleolar RNA, C/D box 56B	snoRNA
20.4333-11	chr8	27712801	27713164	+	0.0666667	NA	Intergenic	L1MC4|LINE|L1	-11215	NR_037418	100500871		NR_037418	ENSG00000265075	MIR3622B	-	microRNA 3622b	ncRNA
16.1-11	chr8	125445049	125445469	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	13050	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding
20.1-10	chrX	86297739	86298181	+	0.0666667	NA	intron (NM_001139515, intron 1 of 11)	intron (NM_001139515, intron 1 of 11)	34992	NM_001139515	117154	Hs.86603	NM_053281	ENSG00000126733	DACH2	-	dachshund family transcription factor 2	protein-coding
4.96667	chr10	118142263	118142337	+	0.0666667	NA	intron (NR_026940, intron 3 of 3)	intron (NR_026940, intron 3 of 3)	-95359	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding
14.2333-4	chr10	81419919	81420299	+	0.0666667	NA	Intergenic	Intergenic	-455085	NM_001370083	10718	Hs.125119	NM_001010848	ENSG00000185737	NRG3	HRG3|pro-NRG3	neuregulin 3	protein-coding
12.3667-6	chr5	38634262	38634480	+	0.0666667	NA	intron (NR_103554, intron 2 of 8)	MER21-int|LTR|ERVL	-38966	NM_002310	3977	Hs.133421	NM_002310	ENSG00000113594	LIFR	CD118|LIF-R|SJS2|STWS|SWS	LIF receptor subunit alpha	protein-coding
16.6333-15	chrX	154294714	154295054	+	0.0666667	NA	promoter-TSS (NM_012253)	promoter-TSS (NM_012253)	217	NM_001586	1527	Hs.672606	NM_001586	ENSG00000278057	TEX28	CXorf2|MRX99|TEX28P1|TEX28P2|fTEX	testis expressed 28	protein-coding
24.6333-9	chr5	64559333	64559898	+	0.0666667	NA	intron (NM_001029875, intron 2 of 5)	MamTip2|DNA|hAT-Tip100	-16035	NR_073511	401190	Hs.657133	NM_001029875	ENSG00000186479	RGS7BP	R7BP	regulator of G protein signaling 7 binding protein	protein-coding
18.6333-4	chr1	107137750	107138242	+	0.0666667	NA	Intergenic	Intergenic	-2092	NM_014917	22854	Hs.133046	NM_014917	ENSG00000162631	NTNG1	Lmnt1	netrin G1	protein-coding
23.6333-9	chr5	119156149	119156693	+	0.0666667	NA	intron (NM_001290321, intron 19 of 43)	Tigger1|DNA|TcMar-Tigger	1784	NR_049892	100847085		NR_049892	ENSG00000264536	MIR5706	-	microRNA 5706	ncRNA
13.5333-13	chr21	21257489	21257760	+	0.0666667	NA	intron (NM_001352592, intron 2 of 18)	AluSg|SINE|Alu	110462	NM_001352597	4685	Hs.473450	NM_004540	ENSG00000154654	NCAM2	NCAM21	neural cell adhesion molecule 2	protein-coding
17.1-11	chr17	64278629	64278983	+	0.0666667	NA	Intergenic	Intergenic	-15546	NM_018469	55852	Hs.175414	NM_018469	ENSG00000136478	TEX2	HT008|TMEM96	testis expressed 2	protein-coding
29.3-7	chr5	151244746	151245408	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-8108	NM_000405	2760	Hs.483873	NM_000405	ENSG00000196743	GM2A	GM2-AP|SAP-3	GM2 ganglioside activator	protein-coding
20.7333	chr1	176525712	176526310	+	0.0666667	NA	intron (NM_021936, intron 1 of 4)	intron (NM_021936, intron 1 of 4)	62836	NM_020318	60676	Hs.187284	NM_020318	ENSG00000116183	PAPPA2	PAPP-A2|PAPP-E|PAPPE|PLAC3	pappalysin 2	protein-coding
10.1667-8	chr8	116908771	116908971	+	0.0666667	NA	Intergenic	Intergenic	-29336	NM_001025357	441376	Hs.437551	NM_001025357	ENSG00000205002	AARD	C8orf85	alanine and arginine rich domain containing protein	protein-coding
8.16667-6	chr6	84425891	84426013	+	0.0666667	NA	intron (NR_132100, intron 4 of 4)	intron (NR_132100, intron 4 of 4)	48977	NR_132100	105377880	Hs.171384	NR_132100	ENSG00000231776	LINC01611	TCONS_l2_00025430	long intergenic non-protein coding RNA 1611	ncRNA
5.6	chr16	48636614	48636699	+	0.0666667	NA	Intergenic	Intergenic	-26476	NM_153029	9683	Hs.511839	NM_153029	ENSG00000102921	N4BP1	-	NEDD4 binding protein 1	protein-coding
16.1667-8	chr14	52390676	52390998	+	0.0666667	NA	Intergenic	Intergenic	76525	NM_000956	5732	Hs.2090	NM_000956	ENSG00000125384	PTGER2	EP2	prostaglandin E receptor 2	protein-coding
19.2333-9	chr3	16805230	16805726	+	0.0666667	NA	Intergenic	LTR16B1|LTR|ERVL	-79477	NM_001144382	23228	Hs.202010	NM_015184	ENSG00000154822	PLCL2	PLCE2	phospholipase C like 2	protein-coding
14.6-11	chr4	185275570	185275949	+	0.0666667	NA	intron (NM_001317781, intron 5 of 18)	intron (NM_001317781, intron 5 of 18)	71522	NM_001317781	83891	Hs.369091	NM_031953	ENSG00000109762	SNX25	MSTP043|SBBI31	sorting nexin 25	protein-coding
8.33333-4	chr7	4410932	4411128	+	0.0666667	NA	Intergenic	MLT1G3|LTR|ERVL-MaLR	-271265	NM_001037165	221937	Hs.487393	NM_001037165	ENSG00000164916	FOXK1	FOXK1L	forkhead box K1	protein-coding
16.5667-8	chrX	153020860	153021319	+	0.0666667	NA	Intergenic	Intergenic	-26973	NM_001184924	114824	Hs.573567	NM_052926	ENSG00000198883	PNMA5	-	PNMA family member 5	protein-coding
21.1-3	chr2	5134947	5135342	+	0.0666667	NA	Intergenic	LTR78|LTR|ERV1	-478922	NR_034134	727982	Hs.444391	NR_034134	ENSG00000231532	LINC01249	-	long intergenic non-protein coding RNA 1249	ncRNA
14.9333-19	chr9	111719518	111719896	+	0.0666667	NA	intron (NM_173521, intron 13 of 25)	intron (NM_173521, intron 13 of 25)	39829	NM_001080551	158401	Hs.428209	NM_173521	ENSG00000165181	SHOC1	C9orf84|ZIP2|ZIP2H	shortage in chiasmata 1	protein-coding
8.49999	chr2	15226845	15227088	+	0.0666667	NA	intron (NM_015909, intron 47 of 51)	L1MA6|LINE|L1	334368	NM_015909	51594	Hs.467759	NM_015909	ENSG00000151779	NBAS	ILFS2|NAG|SOPH	neuroblastoma amplified sequence	protein-coding
10.8-5	chr3	99406361	99406594	+	0.0666667	NA	Intergenic	L1MA3|LINE|L1	-232117	NM_020351	1295	Hs.654548	NM_001850	ENSG00000144810	COL8A1	C3orf7	collagen type VIII alpha 1 chain	protein-coding
15.7333-14	chr6	18621550	18621948	+	0.0666667	NA	intron (NR_149116, intron 4 of 7)	intron (NR_149116, intron 4 of 7)	49965	NR_030312	693125		NR_030312	ENSG00000207775	MIR548A1	MIRN548A1	microRNA 548a-1	ncRNA
12.6333-4	chr2	229435451	229435688	+	0.0666667	NA	intron (NM_139072, intron 8 of 12)	intron (NM_139072, intron 8 of 12)	-164282	NM_001330157	55022	Hs.745038	NM_017933	ENSG00000153823	PID1	HMFN2073|NYGGF4|P-CLI1|PCLI1	phosphotyrosine interaction domain containing 1	protein-coding
17.8667-10	chr20	24267485	24267880	+	0.0666667	NA	Intergenic	L1MCa|LINE|L1	67915	NR_040102	400839	Hs.651965	NR_040102	ENSG00000230133	LINC01721	-	long intergenic non-protein coding RNA 1721	ncRNA
34.6667-6	chr17	82658726	82659369	+	0.0666667	NA	intron (NM_006822, intron 4 of 5)	MLT1C|LTR|ERVL-MaLR	9260	NR_039751	100616196		NR_039751	ENSG00000266107	MIR4525	-	microRNA 4525	ncRNA
15.4333-3	chr12	47226395	47226682	+	0.0666667	NA	intron (NM_138371, intron 3 of 3)	AluSz|SINE|Alu	-10095	NR_026544	100233209	Hs.657722	NR_026544	ENSG00000247774	PCED1B-AS1	-	PCED1B antisense RNA 1	ncRNA
15.4667-19	chr6	125356268	125356606	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-54470	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding
23.9-3	chr17	43045609	43046190	+	0.0666667	NA	intron (NR_027676, intron 22 of 22)	intron (NR_027676, intron 22 of 22)	20668	NM_005440	8153	Hs.603111	NM_005440	ENSG00000108830	RND2	ARHN|RHO7|RhoN	Rho family GTPase 2	protein-coding
19.0667-4	chr17	68823182	68823626	+	0.0666667	NA	Intergenic	HERV16-int|LTR|ERVL	131988	NM_007168	10351	Hs.58351	NM_007168	ENSG00000141338	ABCA8	-	ATP binding cassette subfamily A member 8	protein-coding
6.5	chr6	43570328	43570444	+	0.0666667	NA	intron (NR_144392, intron 5 of 32)	intron (NR_144392, intron 5 of 32)	5652	NM_020750	57510	Hs.203206	NM_020750	ENSG00000124571	XPO5	exp5	exportin 5	protein-coding
8.4-3	chr17	28778572	28778698	+	0.0666667	NA	intron (NM_001288636, intron 3 of 5)	AluSz6|SINE|Alu	33836	NM_001288634	55731	Hs.564533	NM_018182	ENSG00000173065	FAM222B	C17orf63	family with sequence similarity 222 member B	protein-coding
21.3-13	chr3	24153169	24153698	+	0.0666667	NA	intron (NM_001354708, intron 4 of 9)	intron (NM_001354708, intron 4 of 9)	2109	NR_121667	101927854	Hs.570625	NR_121667		LOC101927854	-	uncharacterized LOC101927854	ncRNA
36.6-4	chr18	41799204	41800141	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-155562	NM_002647	5289	Hs.464971	NM_002647	ENSG00000078142	PIK3C3	VPS34|Vps34|hVps34	phosphatidylinositol 3-kinase catalytic subunit type 3	protein-coding
11.7-3	chr5	23329215	23329420	+	0.0666667	NA	Intergenic	L1PA16|LINE|L1	-178292	NM_020227	56979	Hs.283096	NM_020227	ENSG00000164256	PRDM9	KMT8B|MEISETZ|MSBP3|PFM6|ZNF899	PR/SET domain 9	protein-coding
20.6333-8	chr2	106030003	106030450	+	0.0666667	NA	Intergenic	L1ME3|LINE|L1	-35462	NM_032411	84417	Hs.43125	NM_032411	ENSG00000119147	ECRG4	C2orf40	ECRG4 augurin precursor	protein-coding
7.96667-3	chr8	118791078	118791225	+	0.0666667	NA	Intergenic	MIRc|SINE|MIR	160734	NM_002546	4982	Hs.81791	NM_002546	ENSG00000164761	TNFRSF11B	OCIF|OPG|PDB5|TR1	TNF receptor superfamily member 11b	protein-coding
11.9333-6	chr9	95565812	95566032	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-48865	NM_001354919	5727	Hs.494538	NM_000264	ENSG00000185920	PTCH1	BCNS|NBCCS|PTC|PTC1|PTCH	patched 1	protein-coding
18.5-10	chr7	61102029	61102463	+	0.0666667	NA	Intergenic	ALR/Alpha|Satellite|centr	2201810	NR_003952	643955	Hs.583308	NR_003952	ENSG00000185037	ZNF733P	ZNF733	zinc finger protein 733, pseudogene	pseudo
7.26666	chr13	23631514	23631695	+	0.0666667	NA	intron (NM_001354985, intron 5 of 8)	intron (NM_001354985, intron 5 of 8)	52244	NM_001354985	55504	Hs.149168	NM_018647	ENSG00000127863	TNFRSF19	TAJ|TAJ-alpha|TRADE|TROY	TNF receptor superfamily member 19	protein-coding
18-14	chr5	7005461	7005897	+	0.0666667	NA	Intergenic	Intergenic	-177758	NR_036242	100422999		NR_036242	ENSG00000283420	MIR4278	-	microRNA 4278	ncRNA
18.4667-4	chr14	56314836	56315211	+	0.0666667	NA	Intergenic	LTR8B|LTR|ERV1	196612	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding
17.3333-11	chr8	126255290	126255656	+	0.0666667	NA	Intergenic	L1ME3D|LINE|L1	-70022	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA
15.9333-5	chr2	24938163	24938625	+	0.0666667	NA	Intergenic	AluJo|SINE|Alu	-18157	NM_001320613	109	Hs.467898	NM_004036	ENSG00000138031	ADCY3	AC-III|AC3|BMIQ19	adenylate cyclase 3	protein-coding
22.9-13	chr5	160394561	160395143	+	0.0666667	NA	exon (NM_022090, exon 2 of 2)	exon (NM_022090, exon 2 of 2)	5202	NM_022090	63920	Hs.529464	NM_022090	ENSG00000221886	ZBED8	Buster3|C5orf54	zinc finger BED-type containing 8	protein-coding
11.9333-4	chr3	84235174	84235462	+	0.0666667	NA	Intergenic	Intergenic	634257	NR_033860	440970	Hs.411049	NR_033860	ENSG00000242641	LINC00971	-	long intergenic non-protein coding RNA 971	ncRNA
16.4333-4	chr3	130859061	130859528	+	0.0666667	NA	intron (NM_001199181, intron 1 of 26)	intron (NM_001199181, intron 1 of 26)	8699	NM_001199180	27032	Hs.584884	NM_014382	ENSG00000017260	ATP2C1	ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1	ATPase secretory pathway Ca2+ transporting 1	protein-coding
17.5-12	chr7	96360932	96361276	+	0.0666667	NA	Intergenic	LTR8A|LTR|ERV1	-38957	NM_001160210	10165	Hs.489190	NM_014251	ENSG00000004864	SLC25A13	ARALAR2|CITRIN|CTLN2	solute carrier family 25 member 13	protein-coding
13.6333	chr10	20864226	20864430	+	0.0666667	NA	intron (NM_006393, intron 7 of 27)	intron (NM_006393, intron 7 of 27)	33274	NM_006393	10529	Hs.5025	NM_006393	ENSG00000078114	NEBL	LASP2|LNEBL	nebulette	protein-coding
18.3333-2	chr1	69618858	69619286	+	0.0666667	NA	intron (NM_001366842, intron 1 of 7)	MLT1J2|LTR|ERVL-MaLR	49731	NM_001366842	57554	Hs.479658	NM_020794	ENSG00000033122	LRRC7	DENSIN	leucine rich repeat containing 7	protein-coding
8.36667-7	chr5	56919531	56919694	+	0.0666667	NA	TTS (NM_001297599)	TTS (NM_001297599)	9550	NR_136557	133383	Hs.85950	NM_153706	ENSG00000155542	SETD9	C5orf35	SET domain containing 9	protein-coding
16.3333-5	chr14	62527343	62527783	+	0.0666667	NA	Intergenic	L1MC1|LINE|L1	-387590	NR_104063	101954204	Hs.607093	NR_104063	ENSG00000259142	LINC00644	-	long intergenic non-protein coding RNA 644	ncRNA
24.8666-3	chr3	175179920	175180650	+	0.0666667	NA	intron (NM_207015, intron 2 of 13)	intron (NM_207015, intron 2 of 13)	-65043	NR_046390	100862679	Hs.148810	NR_046390	ENSG00000230292	NAALADL2-AS3	-	NAALADL2 antisense RNA 3	ncRNA
19.5-10	chr9	27816392	27816889	+	0.0666667	NA	Intergenic	L1MA4A|LINE|L1	-242774	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
22.8-18	chr8	53177796	53178312	+	0.0666667	NA	Intergenic	L2a|LINE|L2	73583	NM_001318497	4986	Hs.106795	NM_000912	ENSG00000082556	OPRK1	K-OR-1|KOR|KOR-1|OPRK	opioid receptor kappa 1	protein-coding
15.8667-2	chr13	49385468	49385804	+	0.0666667	NA	intron (NM_001079670, intron 3 of 10)	Tigger1|DNA|TcMar-Tigger	15906	NM_030925	81617	Hs.87159	NM_030925	ENSG00000102547	CAB39L	MO25-BETA|MO2L|bA103J18.3	calcium binding protein 39 like	protein-coding
8	chr7	22211736	22211857	+	0.0666667	NA	intron (NM_012294, intron 9 of 25)	L2c|LINE|L2	-16986	NM_001367602	9771	Hs.174768	NM_012294	ENSG00000136237	RAPGEF5	GFR|MR-GEF|REPAC	Rap guanine nucleotide exchange factor 5	protein-coding
5.5-2	chr21	39041368	39041450	+	0.0666667	NA	Intergenic	Charlie1b|DNA|hAT-Charlie	-63635	NR_109962	101928435	Hs.385528	NR_109962	ENSG00000232837	LINC01700	-	long intergenic non-protein coding RNA 1700	ncRNA
19.5667	chr1	185701750	185702288	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-32372	NM_031935	83872	Hs.58877	NM_031935	ENSG00000143341	HMCN1	ARMD1|FBLN6|FIBL-6|FIBL6	hemicentin 1	protein-coding
8.1-5	chr7	130063599	130063721	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-6874	NM_014997	23008	Hs.520710	NM_014997	ENSG00000128607	KLHDC10	slim	kelch domain containing 10	protein-coding
12.7	chr10	19365669	19365859	+	0.0666667	NA	intron (NM_001142308, intron 26 of 39)	intron (NM_001142308, intron 26 of 39)	316963	NM_001142308	340895	Hs.646734	NM_001142308	ENSG00000204740	MALRD1	C10orf112|DIET1|bA265G8.2	MAM and LDL receptor class A domain containing 1	protein-coding
8.6	chr10	50530170	50530314	+	0.0666667	NA	intron (NM_147156, intron 2 of 10)	intron (NM_147156, intron 2 of 10)	93714	NM_147156	259230	Hs.654698	NM_147156	ENSG00000198964	SGMS1	MOB|MOB1|SMS1|TMEM23|hmob33	sphingomyelin synthase 1	protein-coding
35.5666-4	chr6	46538219	46539170	+	0.0666667	NA	Intergenic	Intergenic	-46627	NM_001251973	10231	Hs.440168	NM_005822	ENSG00000172348	RCAN2	CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4	regulator of calcineurin 2	protein-coding
17.9667-2	chr16	24861948	24862318	+	0.0666667	NA	intron (NR_147939, intron 4 of 18)	MLT1A0|LTR|ERVL-MaLR	15902	NM_052944	115584	Hs.164118	NM_052944	ENSG00000158865	SLC5A11	KST1|RKST1|SGLT6|SMIT2	solute carrier family 5 member 11	protein-coding
19.1667-8	chr16	76786502	76786953	+	0.0666667	NA	Intergenic	L1M5|LINE|L1	-82209	NR_039870	100616172		NR_039870	ENSG00000266426	MIR4719	-	microRNA 4719	ncRNA
18.7667-10	chr4	69720692	69721167	+	0.0666667	NA	TTS (NM_014465)	TTS (NM_014465)	39691	NM_014465	27284	Hs.129742	NM_014465	ENSG00000173597	SULT1B1	ST1B1|ST1B2|SULT1B2	sulfotransferase family 1B member 1	protein-coding
22.9-2	chr1	84063867	84064503	+	0.0666667	NA	Intergenic	L1ME1|LINE|L1	-13790	NM_002731	5567	Hs.487325	NM_002731	ENSG00000142875	PRKACB	PKA C-beta|PKACB	protein kinase cAMP-activated catalytic subunit beta	protein-coding
8.83333-3	chr18	42571153	42571379	+	0.0666667	NA	intron (NR_046174, intron 6 of 9)	AluJb|SINE|Alu	384598	NR_046174	284260	Hs.652819	NR_046174	ENSG00000267586	LINC00907	-	long intergenic non-protein coding RNA 907	ncRNA
6.13333	chr11	79245358	79245523	+	0.0666667	NA	intron (NM_001098816, intron 2 of 33)	intron (NM_001098816, intron 2 of 33)	156669	NR_030598	100126333		NR_030598	ENSG00000211997	MIR708	MIRN708|hsa-mir-708	microRNA 708	ncRNA
10.5333-4	chr2	82417890	82418051	+	0.0666667	NA	Intergenic	Tigger2a|DNA|TcMar-Tigger	-438833	NR_033423	1720	Hs.169235	NR_033423		DHFRP3	-	dihydrofolate reductase pseudogene 3	pseudo
16.4333-7	chr7	7530135	7530581	+	0.0666667	NA	intron (NM_001037763, intron 3 of 34)	intron (NM_001037763, intron 3 of 34)	5515	NM_001037763	340267	Hs.491104	NM_001037763	ENSG00000215018	COL28A1	COL28	collagen type XXVIII alpha 1 chain	protein-coding
34.4-3	chr5	150632385	150633318	+	0.0666667	NA	intron (NM_001166208, intron 2 of 2)	intron (NM_001166208, intron 2 of 2)	-7809	NM_007286	11346	Hs.435228	NM_007286	ENSG00000171992	SYNPO	-	synaptopodin	protein-coding
14.8667-7	chr2	74219374	74219803	+	0.0666667	NA	intron (NM_133478, intron 30 of 30)	intron (NM_133478, intron 30 of 30)	20973	NM_006636	10797	Hs.469030	NM_006636	ENSG00000065911	MTHFD2	NMDMC	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase	protein-coding
33.9333-5	chr8	143948938	143949485	+	0.0666667	NA	intron (NM_000445, intron 2 of 32)	intron (NM_000445, intron 2 of 32)	1715	NM_201380	5339	Hs.434248	NM_000445	ENSG00000178209	PLEC	EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN	plectin	protein-coding
20.0333-11	chr3	156392212	156392666	+	0.0666667	NA	intron (NM_172159, intron 1 of 13)	intron (NM_172159, intron 1 of 13)	54497	NR_046618	100874084	Hs.131282	NR_046618	ENSG00000242370	KCNAB1-AS1	-	KCNAB1 antisense RNA 1	ncRNA
14.9667-8	chr5	17411269	17411619	+	0.0666667	NA	intron (NR_134274, intron 1 of 1)	intron (NR_134274, intron 1 of 1)	7298	NR_134274	101929544	Hs.23725	NR_134273	ENSG00000248455	LINC02217	-	long intergenic non-protein coding RNA 2217	ncRNA
8.83333-2	chr17	43911368	43911584	+	0.0666667	NA	Intergenic	Intergenic	-1765	NM_001278370	4355	Hs.514208	NM_005374	ENSG00000108852	MPP2	DLG2	membrane palmitoylated protein 2	protein-coding
8.73333-2	chr10	33977289	33977454	+	0.0666667	NA	Intergenic	Intergenic	-204691	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA
8.29999	chr4	106090343	106090588	+	0.0666667	NA	intron (NM_001290768, intron 26 of 26)	MSTB-int|LTR|ERVL-MaLR	-67987	NR_125928	101929577	Hs.631131	NR_125928	ENSG00000249635	LOC101929577	-	uncharacterized LOC101929577	ncRNA
9.23333	chr20	40328371	40328551	+	0.0666667	NA	Intergenic	L2a|LINE|L2	324000	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA
13.3667-13	chr6	107028074	107028414	+	0.0666667	NA	promoter-TSS (NM_001142470)	promoter-TSS (NM_001142470)	45	NM_001142470	51250	Hs.486084	NM_016487	ENSG00000130349	C6orf203	HSPC230|PRED31	chromosome 6 open reading frame 203	protein-coding
20.1667-4	chr17	72645326	72645628	+	0.0666667	NA	TTS (NM_001159770)	TTS (NM_001159770)	-5005	NR_033876	400619	Hs.447555	NR_033876	ENSG00000227036	LINC00511	LCAL5|onco-lncRNA-12	long intergenic non-protein coding RNA 511	ncRNA
7.9-3	chr9	69373029	69373148	+	0.0666667	NA	intron (NM_001127608, intron 3 of 10)	intron (NM_001127608, intron 3 of 10)	43763	NM_004816	9413	Hs.118003	NM_004816	ENSG00000135063	FAM189A2	C9orf61|X123	family with sequence similarity 189 member A2	protein-coding
15.9667-10	chr5	44736761	44737220	+	0.0666667	NA	Intergenic	Intergenic	71803	NR_109865	100506674	Hs.575213	NR_109862		MRPS30-DT	BRCAT54	MRPS30 divergent transcript	ncRNA
14.8-6	chr12	108987217	108987489	+	0.0666667	NA	intron (NM_018711, intron 1 of 15)	L1MB3|LINE|L1	33715	NM_018711	55530	Hs.4221	NM_018711	ENSG00000166111	SVOP	-	SV2 related protein	protein-coding
4.23333-2	chr8	49382275	49382395	+	0.0666667	NA	Intergenic	Intergenic	129845	NR_134294	100507464	Hs.245745	NR_134294	ENSG00000253380	LOC100507464	-	uncharacterized LOC100507464	ncRNA
16.3-12	chr8	70312767	70313248	+	0.0666667	NA	intron (NM_001321703, intron 1 of 22)	intron (NM_001321703, intron 1 of 22)	90383	NM_001321712	10499	Hs.446678	NM_006540	ENSG00000140396	NCOA2	GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75	nuclear receptor coactivator 2	protein-coding
13.2-7	chr18	66976760	66977032	+	0.0666667	NA	Intergenic	UCON48|Unknown|Unknown	-104688	NR_049809	100847002		NR_049809	ENSG00000263354	MIR5011	-	microRNA 5011	ncRNA
18.3	chr1	7342622	7343019	+	0.0666667	NA	intron (NM_001349608, intron 4 of 21)	intron (NM_001349608, intron 4 of 21)	46934	NR_146199	102725193	Hs.666120	NR_146199	ENSG00000237728	LOC102725193	-	uncharacterized LOC102725193	ncRNA
26.6667-8	chr3	12427774	12428199	+	0.0666667	NA	intron (NM_138712, intron 7 of 7)	intron (NM_138712, intron 7 of 7)	-56446	NM_001145393	80746	Hs.335550	NM_025265	ENSG00000154743	TSEN2	PCH2B|SEN2|SEN2L	tRNA splicing endonuclease subunit 2	protein-coding
5.69999	chr20	62722979	62723146	+	0.0666667	NA	intron (NM_002531, intron 1 of 3)	intron (NM_002531, intron 1 of 3)	14226	NM_002531	4923	Hs.590869	NM_002531	ENSG00000101188	NTSR1	NTR	neurotensin receptor 1	protein-coding
30.8333-4	chr4	88853672	88854164	+	0.0666667	NA	intron (NM_014883, intron 6 of 23)	MLT2A2|LTR|ERVL	-30557	NM_001265580	10144	Hs.97270	NM_014883	ENSG00000138640	FAM13A	ARHGAP48|FAM13A1	family with sequence similarity 13 member A	protein-coding
20.5-3	chr16	46398021	46398399	+	0.0666667	NA	Intergenic	Intergenic	170887	NR_026556	124149	Hs.97414	NM_001004299		ANKRD26P1	-	ankyrin repeat domain 26 pseudogene 1	pseudo
18-5	chr11	74690946	74691484	+	0.0666667	NA	Intergenic	Intergenic	20152	NM_001304417	25884	Hs.432379	NM_015424	ENSG00000054938	CHRDL2	BNF1|CHL2	chordin like 2	protein-coding
20.6667-12	chr3	887840	888311	+	0.0666667	NA	Intergenic	Intergenic	-204949	NM_001349361	27255	Hs.387300	NM_014461	ENSG00000134115	CNTN6	NB3	contactin 6	protein-coding
14.9-6	chr2	120118279	120118644	+	0.0666667	NA	intron (NM_001330310, intron 16 of 24)	L1PA11|LINE|L1	104939	NM_024121	79134	Hs.376722	NM_024121	ENSG00000226479	TMEM185B	FAM11B	transmembrane protein 185B	protein-coding
5.96667	chr2	58160069	58160184	+	0.0666667	NA	TTS (NM_001288839)	TTS (NM_001288839)	81254	NR_156742	55120	Hs.631890	NM_018062	ENSG00000115392	FANCL	FAAP43|PHF9|POG	FA complementation group L	protein-coding
16.6-5	chr14	85746517	85746931	+	0.0666667	NA	Intergenic	Intergenic	-187954	NR_110155	101928767	Hs.536380	NR_110155		LINC02328	-	long intergenic non-protein coding RNA 2328	ncRNA
26.4-4	chr12	6141174	6141574	+	0.0666667	NA	Intergenic	Intergenic	-16699	NM_000552	7450	Hs.440848	NM_000552	ENSG00000110799	VWF	F8VWF|VWD	von Willebrand factor	protein-coding
13.1333-4	chr14	68394086	68394455	+	0.0666667	NA	intron (NM_133509, intron 8 of 10)	intron (NM_133509, intron 8 of 10)	234517	NR_135816	100996664		NR_135816		LOC100996664	-	uncharacterized LOC100996664	ncRNA
13.9333-11	chr9	28074932	28075268	+	0.0666667	NA	intron (NM_152570, intron 5 of 6)	L1ME3E|LINE|L1	-501234	NM_145005	203228	Hs.493639	NM_018325	ENSG00000147894	C9orf72	ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1	C9orf72-SMCR8 complex subunit	protein-coding
11.0667-2	chr2	46385326	46385566	+	0.0666667	NA	3' UTR (NM_001430, exon 16 of 16)	3' UTR (NM_001430, exon 16 of 16)	8721	NR_146999	105374582	Hs.570163	NR_146999	ENSG00000228100	LINC01820	-	long intergenic non-protein coding RNA 1820	ncRNA
22.9-3	chr1	113949388	113949927	+	0.0666667	NA	intron (NM_198268, intron 2 of 15)	AluSx1|SINE|Alu	-1488	NM_198269	204851	Hs.532363	NM_152696	ENSG00000163349	HIPK1	Myak|Nbak2	homeodomain interacting protein kinase 1	protein-coding
21.7-16	chr6	41674476	41674952	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	36246	NM_001300805	4188	Hs.520119	NM_005586	ENSG00000112559	MDFI	I-MF|I-mfa	MyoD family inhibitor	protein-coding
14.8667-5	chr13	40209177	40209600	+	0.0666667	NA	intron (NR_033877, intron 1 of 5)	intron (NR_033877, intron 1 of 5)	11114	NR_033877	400123	Hs.577960	NR_033877	ENSG00000215483	LINC00548	-	long intergenic non-protein coding RNA 548	ncRNA
14.6333-7	chr20	18299417	18299721	+	0.0666667	NA	intron (NM_001352454, intron 3 of 5)	L1MB3|LINE|L1	11042	NM_001283001	7692	Hs.472221	NM_003434	ENSG00000125846	ZNF133	ZNF150|pHZ-13|pHZ-66	zinc finger protein 133	protein-coding
7.56667-4	chrX	86953015	86953128	+	0.0666667	NA	Intergenic	L1MA10|LINE|L1	-564731	NM_019117	56062	Hs.49075	NM_019117	ENSG00000102271	KLHL4	DKELCHL|KHL4	kelch like family member 4	protein-coding
25.2667-8	chr2	56652899	56653527	+	0.0666667	NA	Intergenic	Intergenic	-467443	NR_125368	100129434	Hs.580330	NR_125368		LOC100129434	-	uncharacterized LOC100129434	ncRNA
14.7-5	chr19	28547811	28548196	+	0.0666667	NA	intron (NR_110759, intron 5 of 9)	AluSx4|SINE|Alu	-58685	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA
14.2333-2	chr1	163457457	163457882	+	0.0666667	NA	Intergenic	MIR3|SINE|MIR	-34478	NR_104294	100422212	Hs.556898	NR_104294		LOC100422212	-	eukaryotic translation initiation factor 3 subunit J pseudogene	pseudo
15.5-2	chr11	128984146	128984554	+	0.0666667	NA	intron (NM_001142685, intron 14 of 21)	AluJb|SINE|Alu	39838	NM_014715	9743	Hs.440379	NM_014715	ENSG00000134909	ARHGAP32	GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP	Rho GTPase activating protein 32	protein-coding
25.9667-12	chr7	121825320	121825784	+	0.0666667	NA	Intergenic	Intergenic	-47609	NM_001206838	5803	Hs.489824	NM_002851	ENSG00000106278	PTPRZ1	HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan	protein tyrosine phosphatase receptor type Z1	protein-coding
6.23333-4	chr7	40873031	40873194	+	0.0666667	NA	Intergenic	Intergenic	106827	NR_110831	101928744	Hs.639767	NR_110831	ENSG00000232458	LINC01450	-	long intergenic non-protein coding RNA 1450	ncRNA
17.3667-12	chr5	164683818	164684078	+	0.0666667	NA	Intergenic	Intergenic	213669	NR_105065	102546299	Hs.437730	NR_105065	ENSG00000241956	LOC102546299	-	uncharacterized LOC102546299	ncRNA
20.7	chr1	169362262	169362781	+	0.0666667	NA	intron (NR_104229, intron 1 of 12)	intron (NR_104229, intron 1 of 12)	5276	NM_013330	29922	Hs.706952	NM_013330	ENSG00000143156	NME7	CFAP67|MN23H7|NDK 7|NDK7|nm23-H7	NME/NM23 family member 7	protein-coding
22.5-8	chr7	82896574	82897217	+	0.0666667	NA	intron (NM_033026, intron 9 of 24)	intron (NM_033026, intron 9 of 24)	265989	NM_014510	27445	Hs.12376	NM_014510	ENSG00000186472	PCLO	ACZ|PCH3	piccolo presynaptic cytomatrix protein	protein-coding
13.3-3	chr17	51651600	51651910	+	0.0666667	NA	intron (NM_001082533, intron 6 of 9)	intron (NM_001082533, intron 6 of 9)	216328	NR_146897	105371828	Hs.640153	NR_146897		LINC02073	-	long intergenic non-protein coding RNA 2073	ncRNA
33.0666-4	chr14	63959170	63960121	+	0.0666667	NA	intron (NM_015180, intron 8 of 114)	intron (NM_015180, intron 8 of 114)	106641	NM_015180	23224	Hs.745014	NM_015180	ENSG00000054654	SYNE2	EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH	spectrin repeat containing nuclear envelope protein 2	protein-coding
11.7667-8	chr6	42531363	42531563	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-32559	NM_015255	23304	Hs.529925	NM_015255	ENSG00000024048	UBR2	C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3	ubiquitin protein ligase E3 component n-recognin 2	protein-coding
17.1667	chr1	103907757	103908180	+	0.0666667	NA	Intergenic	AluJr4|SINE|Alu	158127	NM_001008218	277	Hs.599274	NM_001008218	ENSG00000174876	AMY1B	AMY1	amylase alpha 1B (salivary)	protein-coding
10.6-3	chr5	105350032	105350348	+	0.0666667	NA	Intergenic	L1PBa|LINE|L1	250716	NR_000039	9366	Hs.158296	NR_000039	ENSG00000232159	RAB9BP1	RAB9P1	RAB9B, member RAS oncogene family pseudogene 1	pseudo
23.5-4	chr11	31954940	31955515	+	0.0666667	NA	Intergenic	Intergenic	86091	NR_120527	100506675	Hs.446169	NR_120526	ENSG00000254584	LOC100506675	-	uncharacterized LOC100506675	ncRNA
12.7667-3	chr2	164188411	164188761	+	0.0666667	NA	Intergenic	Intergenic	379909	NM_001303422	2888	Hs.411881	NM_004490	ENSG00000115290	GRB14	-	growth factor receptor bound protein 14	protein-coding
16.4	chr1	158988804	158989067	+	0.0666667	NA	Intergenic	MLT1C-int|LTR|ERVL-MaLR	-11041	NM_001364867	3428	Hs.380250	NM_005531	ENSG00000163565	IFI16	IFNGIP1|PYHIN2	interferon gamma inducible protein 16	protein-coding
16.0667-12	chr6	111022678	111023089	+	0.0666667	NA	intron (NM_001289111, intron 7 of 8)	intron (NM_001289111, intron 7 of 8)	24671	NR_002932	442245	Hs.551627	NR_002932		GSTM2P1	-	glutathione S-transferase mu 2 pseudogene 1	pseudo
17.5333-4	chr13	76747359	76747728	+	0.0666667	NA	Intergenic	Intergenic	138862	NM_138444	115207	Hs.644125	NM_138444	ENSG00000178695	KCTD12	C13orf2|PFET1|PFETIN	potassium channel tetramerization domain containing 12	protein-coding
14.2667-3	chr12	31420207	31420591	+	0.0666667	NA	intron (NM_144973, intron 11 of 20)	AluJb|SINE|Alu	-51098	NR_146469	101929027	Hs.266041	NR_146469	ENSG00000256232	LINC02387	-	long intergenic non-protein coding RNA 2387	ncRNA
15.4667-14	chr4	164901667	164902105	+	0.0666667	NA	Intergenic	AluSq2|SINE|Alu	24708	NM_001297550	100506013	Hs.105196	NM_001297550	ENSG00000248329	APELA	ELA|Ende|tdl	apelin receptor early endogenous ligand	protein-coding
14.6667-2	chr15	85907395	85907801	+	0.0666667	NA	Intergenic	Intergenic	81963	NR_049805	100847084		NR_049805	ENSG00000264406	MIR548AP	-	microRNA 548ap	ncRNA
16.1333-9	chr2	4688442	4688855	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-32426	NR_034134	727982	Hs.444391	NR_034134	ENSG00000231532	LINC01249	-	long intergenic non-protein coding RNA 1249	ncRNA
15.0667-16	chr9	131647963	131648380	+	0.0666667	NA	intron (NM_198679, intron 3 of 23)	AluSx1|SINE|Alu	61671	NM_198679	2889	Hs.127897	NM_005312	ENSG00000107263	RAPGEF1	C3G|GRF2	Rap guanine nucleotide exchange factor 1	protein-coding
5.2	chr2	55205981	55206114	+	0.0666667	NA	intron (NR_148540, intron 5 of 9)	L1ME3Cz|LINE|L1	-25856	NM_001135592	6233	Hs.311640	NM_002954	ENSG00000143947	RPS27A	CEP80|HEL112|S27A|UBA80|UBC|UBCEP1|UBCEP80	ribosomal protein S27a	protein-coding
11.4-10	chr6	44435578	44435835	+	0.0666667	NA	promoter-TSS (NR_039785)	promoter-TSS (NR_039785)	65	NR_039785	100616352		NR_039785	ENSG00000266619	MIR4642	-	microRNA 4642	ncRNA
13.7333-6	chr4	104606155	104606513	+	0.0666667	NA	intron (NR_125926, intron 1 of 9)	L1M3a|LINE|L1	-111440	NR_132741	80319	Hs.12248	NM_025212	ENSG00000168772	CXXC4	IDAX	CXXC finger protein 4	protein-coding
22.8-9	chr19	34025101	34025670	+	0.0666667	NA	Intergenic	LTR81AB|LTR|Gypsy	-147119	NM_015578	26065	Hs.744009	NM_015578	ENSG00000257103	LSM14A	C19orf13|FAM61A|RAP55|RAP55A	LSM14A mRNA processing body assembly factor	protein-coding
27.8333-8	chr5	31562212	31562774	+	0.0666667	NA	Intergenic	Intergenic	30192	NM_018356	55322	Hs.519246	NM_018356	ENSG00000082213	C5orf22	-	chromosome 5 open reading frame 22	protein-coding
24.6333-3	chr21	42426441	42426897	+	0.0666667	NA	intron (NM_018961, intron 7 of 14)	intron (NM_018961, intron 7 of 14)	22767	NM_001001895	53347	Hs.473912	NM_018961	ENSG00000160185	UBASH3A	CLIP4|STS-2|TULA|TULA-1	ubiquitin associated and SH3 domain containing A	protein-coding
19.3333-6	chr18	3785617	3786083	+	0.0666667	NA	intron (NM_001242762, intron 2 of 9)	LTR48B|LTR|ERV1	59508	NM_001242765	9229	Hs.594640	NM_004746	ENSG00000170579	DLGAP1	DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1	DLG associated protein 1	protein-coding
6.33333-2	chr12	19991583	19991722	+	0.0666667	NA	Intergenic	Intergenic	-23033	NR_040098	100506393	Hs.658356	NR_040098	ENSG00000256287	LINC02398	-	long intergenic non-protein coding RNA 2398	ncRNA
24.6	chr1	234262423	234262912	+	0.0666667	NA	intron (NM_173508, intron 3 of 7)	intron (NM_173508, intron 3 of 7)	-43800	NR_039818	100616380		NR_039818	ENSG00000264377	MIR4671	-	microRNA 4671	ncRNA
10.5667-3	chr4	168659951	168660132	+	0.0666667	NA	intron (NM_001166109, intron 1 of 18)	intron (NM_001166109, intron 1 of 18)	28463	NM_001166109	23022	Hs.151220	NM_016081	ENSG00000129116	PALLD	CGI-151|CGI151|MYN|PNCA1|SIH002	palladin, cytoskeletal associated protein	protein-coding
10.5333-6	chr5	90719544	90719819	+	0.0666667	NA	intron (NR_003149, intron 43 of 89)	L1ME3|LINE|L1	160884	NR_003149	84059	Hs.591777	NM_032119	ENSG00000164199	ADGRV1	FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b	adhesion G protein-coupled receptor V1	protein-coding
23.5667-11	chr8	85499983	85500463	+	0.0666667	NA	Intergenic	Intergenic	-35308	NR_121630	100996348	Hs.606624	NR_121630	ENSG00000253549	CA3-AS1	-	CA3 antisense RNA 1	ncRNA
25.2-10	chr2	22607706	22608276	+	0.0666667	NA	Intergenic	Intergenic	71512	NR_110577	102723362	Hs.502887	NR_110577	ENSG00000233587	LINC01884	-	long intergenic non-protein coding RNA 1884	ncRNA
6.6-2	chr8	122455534	122455635	+	0.0666667	NA	intron (NR_131202, intron 2 of 3)	intron (NR_131202, intron 2 of 3)	113060	NR_131202	105375734	Hs.628341	NR_131202		SMILR	-	smooth muscle induced lncRNA, enhancer of proliferation	ncRNA
8.46667-3	chr3	4186420	4186604	+	0.0666667	NA	Intergenic	MamRep137|DNA|TcMar-Tigger	-116792	NM_001243723	6419	Hs.475300	NM_006515	ENSG00000170364	SETMAR	METNASE|Mar1	SET domain and mariner transposase fusion gene	protein-coding
27.4667-4	chr12	32649121	32649568	+	0.0666667	NA	Intergenic	L2|LINE|L2	-29856	NM_001278463	10059	Hs.556296	NM_005690	ENSG00000087470	DNM1L	DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5	dynamin 1 like	protein-coding
21.3333-6	chr4	143126389	143126894	+	0.0666667	NA	Intergenic	MER21C|LTR|ERVL	58220	NR_136203	105377623		NR_136203	ENSG00000250326	LOC105377623	-	uncharacterized LOC105377623	ncRNA
11.6667	chr1	231235515	231235756	+	0.0666667	NA	intron (NM_152379, intron 2 of 6)	AluJr4|SINE|Alu	5540	NM_001300830	128061	Hs.743464	NM_152379	ENSG00000143633	C1orf131	-	chromosome 1 open reading frame 131	protein-coding
22.9667-7	chr18	10552776	10553174	+	0.0666667	NA	TTS (NM_003826)	TTS (NM_003826)	26948	NM_003826	8774	Hs.464622	NM_003826	ENSG00000134265	NAPG	GAMMASNAP	NSF attachment protein gamma	protein-coding
7.46666	chr2	40471214	40471430	+	0.0666667	NA	intron (NM_001112802, intron 1 of 7)	intron (NM_001112802, intron 1 of 7)	-19232	NM_001351491	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding
27.9-7	chr7	13961748	13962360	+	0.0666667	NA	intron (NM_001163148, intron 5 of 12)	intron (NM_001163148, intron 5 of 12)	24460	NM_001163150	2115	Hs.22634	NM_004956	ENSG00000006468	ETV1	ER81	ETS variant 1	protein-coding
19-8	chr2	32600363	32600707	+	0.0666667	NA	intron (NM_016252, intron 70 of 73)	intron (NM_016252, intron 70 of 73)	-25717	NR_125793	103752586	Hs.666092	NR_125793	ENSG00000279897	BIRC6-AS2	linc-birc6|megamind	BIRC6 antisense RNA 2	ncRNA
9.13333	chr10	61924706	61924923	+	0.0666667	NA	intron (NM_032199, intron 2 of 9)	intron (NM_032199, intron 2 of 9)	23115	NM_032199	84159	Hs.535297	NM_032199	ENSG00000150347	ARID5B	DESRT|MRF-2|MRF2	AT-rich interaction domain 5B	protein-coding
12.3667-4	chr3	28603780	28604087	+	0.0666667	NA	intron (NR_038840, intron 2 of 4)	L1MCa|LINE|L1	28655	NR_038840	645206	Hs.376725	NR_038840		LINC00693	-	long intergenic non-protein coding RNA 693	ncRNA
7.3-2	chr4	119040251	119040428	+	0.0666667	NA	3' UTR (NM_001128933, exon 4 of 4)	3' UTR (NM_001128933, exon 4 of 4)	-95445	NM_016599	51778	Hs.732122	NM_016599	ENSG00000172399	MYOZ2	C4orf5|CMH16|CS-1|FATZ-2	myozenin 2	protein-coding
20.6667-3	chr11	84245481	84245948	+	0.0666667	NA	intron (NM_001142700, intron 1 of 19)	intron (NM_001142700, intron 1 of 19)	27566	NM_001142700	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
28.6333-10	chr5	45569651	45570208	+	0.0666667	NA	intron (NM_021072, intron 2 of 7)	intron (NM_021072, intron 2 of 7)	126451	NM_021072	348980	Hs.353176	NM_021072	ENSG00000164588	HCN1	BCNG-1|BCNG1|EIEE24|HAC-2	hyperpolarization activated cyclic nucleotide gated potassium channel 1	protein-coding
21.4333-9	chr3	69081559	69082039	+	0.0666667	NA	Intergenic	Intergenic	-1426	NM_001363861	9039	Hs.154320	NM_003968	ENSG00000144744	UBA3	NAE2|UBE1C|hUBA3	ubiquitin like modifier activating enzyme 3	protein-coding
27.6-14	chr6	10215475	10216144	+	0.0666667	NA	Intergenic	Intergenic	-188693	NR_145448	109729173		NR_145448	ENSG00000285278	TFAP2A-AS2	HIPSTR	TFAP2A antisense RNA 2	ncRNA
25.2667-6	chr16	8213913	8214489	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	375637	NR_110736	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding
9.66667	chr12	54302293	54302472	+	0.0666667	NA	Intergenic	MamRep38|DNA|hAT	-1345	NM_001261461	4778	Hs.75643	NM_006163	ENSG00000123405	NFE2	NF-E2|p45	nuclear factor, erythroid 2	protein-coding
11.4-11	chr7	32330922	32331165	+	0.0666667	NA	intron (NM_001322059, intron 1 of 17)	intron (NM_001322059, intron 1 of 17)	-31715	NM_001191058	5137	Hs.143821	NM_005020	ENSG00000154678	PDE1C	DFNA74|Hcam3|cam-PDE 1C|hCam-3	phosphodiesterase 1C	protein-coding
13.2667-11	chr7	33933717	33934043	+	0.0666667	NA	intron (NM_133468, intron 3 of 15)	MIRb|SINE|MIR	28341	NM_001365308	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding
20-2	chr12	56171435	56172011	+	0.0666667	NA	exon (NM_003075, exon 20 of 28)	exon (NM_003075, exon 20 of 28)	13364	NM_021019	4637	Hs.632717	NM_021019	ENSG00000092841	MYL6	ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM	myosin light chain 6	protein-coding
19.8667-9	chr22	36402544	36403097	+	0.0666667	NA	Intergenic	AluSq|SINE|Alu	-14753	NM_002473	4627	Hs.474751	NM_002473	ENSG00000100345	MYH9	BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA	myosin heavy chain 9	protein-coding
28.7667-5	chr6	84338534	84338965	+	0.0666667	NA	Intergenic	L1PB1|LINE|L1	-111106	NM_001286206	22832	Hs.485865	NM_014895	ENSG00000135315	CEP162	C6orf84|KIAA1009|QN1	centrosomal protein 162	protein-coding
11.8333-6	chr21	32440970	32441183	+	0.0666667	NA	intron (NM_001320744, intron 1 of 5)	AluSp|SINE|Alu	28370	NM_058187	59271	Hs.208358	NM_058187	ENSG00000166979	EVA1C	B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21	eva-1 homolog C	protein-coding
18.3667-5	chr19	10494520	10495005	+	0.0666667	NA	intron (NM_012289, intron 2 of 5)	AluY|SINE|Alu	8009	NM_012289	9817	Hs.465870	NM_012289	ENSG00000079999	KEAP1	INrf2|KLHL19	kelch like ECH associated protein 1	protein-coding
8.56667-2	chr14	71029837	71029987	+	0.0666667	NA	intron (NM_014982, intron 16 of 35)	L1ME3Cz|LINE|L1	122453	NM_014982	22990	Hs.446559	NM_014982	ENSG00000100731	PCNX1	PCNX|PCNXL1|pecanex	pecanex 1	protein-coding
8.23333-2	chr17	54170259	54170420	+	0.0666667	NA	Intergenic	Intergenic	347412	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding
13.8333-9	chr7	83595590	83595948	+	0.0666667	NA	intron (NM_012431, intron 1 of 16)	L1MC4a|LINE|L1	45662	NM_001178129	9723	Hs.440730	NM_012431	ENSG00000170381	SEMA3E	M-SEMAH|M-SemaK|SEMAH|coll-5	semaphorin 3E	protein-coding
15.3667-7	chr14	35593981	35594395	+	0.0666667	NA	intron (NM_014990, intron 36 of 40)	L1MA9|LINE|L1	60024	NM_032594	84684	Hs.62813	NM_032594	ENSG00000168348	INSM2	IA-6|IA6|mlt1	INSM transcriptional repressor 2	protein-coding
7.93333-2	chr1	215007049	215007247	+	0.0666667	NA	intron (NM_001017424, intron 1 of 6)	(TA)n|Simple_repeat|Simple_repeat	1606	NM_001017424	3776	Hs.497745	NM_014217	ENSG00000082482	KCNK2	K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e	potassium two pore domain channel subfamily K member 2	protein-coding
17.6-6	chr17	68531310	68531656	+	0.0666667	NA	3' UTR (NM_001369389, exon 12 of 12)	3' UTR (NM_001369389, exon 12 of 12)	16089	NM_001276290	5573	Hs.280342	NM_002734	ENSG00000108946	PRKAR1A	ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1	protein kinase cAMP-dependent type I regulatory subunit alpha	protein-coding
13.2667-3	chr18	6142974	6143311	+	0.0666667	NA	intron (NM_001365769, intron 13 of 16)	intron (NM_001365769, intron 13 of 16)	-113602	NR_110765	101927150		NR_110765		L3MBTL4-AS1	-	L3MBTL4 antisense RNA 1	ncRNA
16.4-12	chrX	74823158	74823582	+	0.0666667	NA	intron (NM_001008537, intron 1 of 3)	L1MB8|LINE|L1	102082	NM_001008537	340533	Hs.124128	NM_001008537	ENSG00000050030	NEXMIF	KIAA2022|KIDLIA|MRX98|XPN	neurite extension and migration factor	protein-coding
6.8-2	chr8	69528974	69529127	+	0.0666667	NA	intron (NR_156414, intron 2 of 20)	MIR|SINE|MIR	36203	NM_001128205	23213	Hs.409602	NM_015170	ENSG00000137573	SULF1	SULF-1	sulfatase 1	protein-coding
14.9333-8	chr15	45601267	45601663	+	0.0666667	NA	intron (NR_132350, intron 3 of 5)	L1MC|LINE|L1	13693	NR_132356	26258	Hs.7037	NM_012388	ENSG00000104164	BLOC1S6	BLOS6|HPS9|PA|PALLID|PLDN	biogenesis of lysosomal organelles complex 1 subunit 6	protein-coding
20.7-9	chr9	109925980	109926290	+	0.0666667	NA	intron (NM_001037293, intron 6 of 6)	intron (NM_001037293, intron 6 of 6)	-122463	NM_001198656	445815	Hs.591908	NM_007203	ENSG00000157654	PALM2-AKAP2	AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2	PALM2-AKAP2 fusion	protein-coding
30.8-15	chr8	87049985	87050836	+	0.0666667	NA	intron (NM_173538, intron 4 of 10)	HUERS-P3-int|LTR|ERV1	183995	NM_173538	168975	Hs.246284	NM_173538	ENSG00000176571	CNBD1	-	cyclic nucleotide binding domain containing 1	protein-coding
26.4667-6	chr3	180646823	180647451	+	0.0666667	NA	exon (NM_181426, exon 11 of 20)	exon (NM_181426, exon 11 of 20)	32352	NM_181426	339829	Hs.712820	NM_181426	ENSG00000284862	CCDC39	CILD14|FAP59	coiled-coil domain containing 39	protein-coding
13	chr10	96698965	96699254	+	0.0666667	NA	intron (NM_152309, intron 2 of 16)	AluSp|SINE|Alu	21405	NM_152309	118788	Hs.310456	NM_152309	ENSG00000155629	PIK3AP1	BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
21.3667-13	chr8	98970898	98971405	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	26709	NM_001142462	116039	Hs.253247	NM_053001	ENSG00000164920	OSR2	-	odd-skipped related transciption factor 2	protein-coding
17.6667-6	chr3	120078279	120078687	+	0.0666667	NA	intron (NM_002093, intron 1 of 11)	intron (NM_002093, intron 1 of 11)	6165	NR_162125	113839522		NR_162125		MIR6529	-	microRNA 6529	ncRNA
12.2667-2	chr2	216426608	216426935	+	0.0666667	NA	intron (NM_001127207, intron 6 of 17)	intron (NM_001127207, intron 6 of 17)	14006	NM_001127207	50485	Hs.516674	NM_014140	ENSG00000138375	SMARCAL1	HARP|HHARP	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1	protein-coding
21.3-5	chr13	34956400	34956719	+	0.0666667	NA	intron (NM_015678, intron 1 of 57)	L1MA6|LINE|L1	14272	NM_015678	26960	Hs.491172	NM_015678	ENSG00000172915	NBEA	BCL8B|LYST2	neurobeachin	protein-coding
17.6-11	chr2	120425794	120426288	+	0.0666667	NA	Intergenic	HAL1|LINE|L1	40308	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA
19.4333-11	chr9	106720558	106720998	+	0.0666667	NA	Intergenic	L3|LINE|CR1	104720	NR_104145	100996590	Hs.147110	NR_104145	ENSG00000234323	LINC01505	-	long intergenic non-protein coding RNA 1505	ncRNA
18.9333-5	chr16	14186067	14186402	+	0.0666667	NA	promoter-TSS (NM_001365415)	promoter-TSS (NM_001365415)	-452	NM_001365416	57496	Hs.49143	NM_014048	ENSG00000186260	MRTFB	MKL2|MRTF-B|NPD001	myocardin related transcription factor B	protein-coding
15.8667-4	chr16	51068864	51069231	+	0.0666667	NA	intron (NR_039672, intron 2 of 6)	intron (NR_039672, intron 2 of 6)	51289	NR_110913	101927334	Hs.555184	NR_110913	ENSG00000261637	LINC02127	-	long intergenic non-protein coding RNA 2127	ncRNA
13.1667	chr1	240316459	240316753	+	0.0666667	NA	intron (NM_020066, intron 8 of 17)	intron (NM_020066, intron 8 of 17)	224723	NM_001348094	56776	Hs.24889	NM_020066	ENSG00000155816	FMN2	-	formin 2	protein-coding
20.8333-14	chr4	108235694	108236200	+	0.0666667	NA	Intergenic	L2c|LINE|L2	63827	NR_029373	641518	Hs.535760	NR_029373	ENSG00000232021	LEF1-AS1	LEF1NAT	LEF1 antisense RNA 1	ncRNA
22.1333-2	chr10	118056408	118056862	+	0.0666667	NA	intron (NR_026940, intron 3 of 3)	intron (NR_026940, intron 3 of 3)	-9694	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding
26.6-20	chr9	113921987	113922528	+	0.0666667	NA	intron (NM_001318042, intron 1 of 14)	intron (NM_001318042, intron 1 of 14)	45948	NM_001318042	114991	Hs.349208	NM_133374	ENSG00000157657	ZNF618	FP13169|NEDD10	zinc finger protein 618	protein-coding
19.3-5	chr12	72958117	72958688	+	0.0666667	NA	Intergenic	Intergenic	-200788	NR_110130	101928137	Hs.694666	NR_110130	ENSG00000258123	LINC02444	-	long intergenic non-protein coding RNA 2444	ncRNA
22-9	chr2	213963259	213963710	+	0.0666667	NA	intron (NR_047660, intron 11 of 14)	L1M4b|LINE|L1	205417	NR_039640	100616375		NR_039640	ENSG00000265734	MIR4438	-	microRNA 4438	ncRNA
19.8667-6	chr2	82296133	82296654	+	0.0666667	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	-560410	NR_033423	1720	Hs.169235	NR_033423		DHFRP3	-	dihydrofolate reductase pseudogene 3	pseudo
12.9333-5	chr17	82366896	82367228	+	0.0666667	NA	Intergenic	L1MEg|LINE|L1	-7215	NM_018949	2837	Hs.192720	NM_018949	ENSG00000181408	UTS2R	GPR14|UR-2-R|UTR|UTR2	urotensin 2 receptor	protein-coding
28.1666-6	chr2	198725010	198725744	+	0.0666667	NA	Intergenic	Intergenic	-350280	NR_110267	101927619	Hs.632942	NR_110267		LINC01923	-	long intergenic non-protein coding RNA 1923	ncRNA
28.8-5	chr17	58808290	58808750	+	0.0666667	NA	intron (NM_014906, intron 1 of 6)	L1M5|LINE|L1	52651	NR_048561	22843	Hs.245044	NM_014906	ENSG00000175175	PPM1E	CaMKP-N|POPX1|PP2CH|caMKN	protein phosphatase, Mg2+/Mn2+ dependent 1E	protein-coding
23.2667-3	chr1	68183042	68183603	+	0.0666667	NA	TTS (NR_031664)	TTS (NR_031664)	288	NR_031664	100302279		NR_031664	ENSG00000221203	MIR1262	MIRN1262|hsa-mir-1262|mir-1262	microRNA 1262	ncRNA
22.6-5	chr13	84802114	84802727	+	0.0666667	NA	Intergenic	Intergenic	18766	NR_132852	106635542		NR_132852		SNORA107	-	small nucleolar RNA, H/ACA box 107	snoRNA
20.9667-3	chr10	70987031	70987534	+	0.0666667	NA	Intergenic	Intergenic	48229	NR_134314	105378349	Hs.119164	NR_134313	ENSG00000259267	LINC02622	-	long intergenic non-protein coding RNA 2622	ncRNA
9.76667	chr2	75092948	75093094	+	0.0666667	NA	intron (NM_015727, intron 2 of 3)	intron (NM_015727, intron 2 of 3)	2209	NR_049796	100846995		NR_049796	ENSG00000263909	MIR5000	-	microRNA 5000	ncRNA
15.2667-9	chr3	30491005	30491409	+	0.0666667	NA	Intergenic	Intergenic	-27661	NR_147054	101928015	Hs.581534	NR_147054		LINC01985	-	long intergenic non-protein coding RNA 1985	ncRNA
17.4-4	chr12	6797978	6798241	+	0.0666667	NA	intron (NM_001195016, intron 1 of 7)	LTR5B|LTR|ERVK	8581	NM_001195017	920	Hs.631659	NM_000616	ENSG00000010610	CD4	CD4mut	CD4 molecule	protein-coding
9.6-8	chr9	128572650	128572819	+	0.0666667	NA	intron (NM_003127, intron 3 of 55)	intron (NM_003127, intron 3 of 55)	20147	NM_001130438	6709	Hs.372331	NM_003127	ENSG00000197694	SPTAN1	EIEE5|NEAS|SPTA2	spectrin alpha, non-erythrocytic 1	protein-coding
16.8-7	chr3	163601552	163601958	+	0.0666667	NA	Intergenic	L1MA2|LINE|L1	-298454	NR_033945	647107	Hs.408584	NR_033945	ENSG00000241369	LINC01192	CT64	long intergenic non-protein coding RNA 1192	ncRNA
10.1333-6	chr8	82895676	82895900	+	0.0666667	NA	Intergenic	Intergenic	-16316	NR_134295	101927141	Hs.128557	NR_134295	ENSG00000254394	LOC101927141	-	uncharacterized LOC101927141	ncRNA
19.6-6	chr16	842951	843374	+	0.0666667	NA	Intergenic	Intergenic	37719	NM_001013638	388199	Hs.528461	NM_001013638		PRR25	gs64	proline rich 25	protein-coding
26.2667	chr1	30315632	30316268	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-278338	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA
18.2-9	chr17	35443743	35444206	+	0.0666667	NA	intron (NM_144682, intron 3 of 5)	intron (NM_144682, intron 3 of 5)	4792	NM_144682	146857	Hs.462833	NM_144682	ENSG00000154760	SLFN13	SLFN10|hSLFN13	schlafen family member 13	protein-coding
41.5666	chr1	179680567	179681624	+	0.0666667	NA	intron (NM_001199091, intron 16 of 16)	AluJb|SINE|Alu	-46681	NR_138088	148753	Hs.400696	NM_173509	ENSG00000143340	FAM163A	C1orf76|NDSP	family with sequence similarity 163 member A	protein-coding
29.4-6	chr2	198643705	198644192	+	0.0666667	NA	Intergenic	Intergenic	-268851	NR_110267	101927619	Hs.632942	NR_110267		LINC01923	-	long intergenic non-protein coding RNA 1923	ncRNA
11.1667-6	chr6	36011726	36011970	+	0.0666667	NA	intron (NM_001193476, intron 3 of 19)	AluJb|SINE|Alu	12652	NM_138718	116369	Hs.435836	NM_052961	ENSG00000112053	SLC26A8	SPGF3|TAT1	solute carrier family 26 member 8	protein-coding
13.7-6	chr9	136021864	136022185	+	0.0666667	NA	intron (NM_144653, intron 2 of 5)	intron (NM_144653, intron 2 of 5)	-60651	NM_016172	10422	Hs.9194	NM_016172	ENSG00000130560	UBAC1	GBDR1|KPC2|UBADC1	UBA domain containing 1	protein-coding
13.8-4	chr2	225118500	225118761	+	0.0666667	NA	Intergenic	Intergenic	-76162	NM_014689	55619	Hs.46578	NM_014689	ENSG00000135905	DOCK10	DRIP2|Nbla10300|ZIZ3	dedicator of cytokinesis 10	protein-coding
16.8333-12	chr5	112112844	112113320	+	0.0666667	NA	Intergenic	L1ME3Cz|LINE|L1	-47444	NR_015370	114915	Hs.12082	NM_053000		EPB41L4A-AS1	C5orf26|NCRNA00219|TIGA1	EPB41L4A antisense RNA 1	ncRNA
20.6-11	chr6	35090616	35091102	+	0.0666667	NA	3' UTR (NM_015245, exon 24 of 24)	3' UTR (NM_015245, exon 24 of 24)	50480	NM_001366330	6954	Hs.435371	NM_018679	ENSG00000124678	TCP11	D6S230E|FPPR	t-complex 11	protein-coding
16.1-9	chr5	81323232	81323578	+	0.0666667	NA	Intergenic	MLT1H|LTR|ERVL-MaLR	21818	NM_001131035	84240	Hs.15536	NM_032280	ENSG00000131732	ZCCHC9	PPP1R41	zinc finger CCHC-type containing 9	protein-coding
18.4-8	chr21	21183811	21184246	+	0.0666667	NA	intron (NM_001352597, intron 1 of 10)	intron (NM_001352597, intron 1 of 10)	36866	NM_001352597	4685	Hs.473450	NM_004540	ENSG00000154654	NCAM2	NCAM21	neural cell adhesion molecule 2	protein-coding
12.1667-5	chr3	152254413	152254744	+	0.0666667	NA	Intergenic	Intergenic	-14351	NM_207292	4154	Hs.201858	NM_021038	ENSG00000152601	MBNL1	EXP|MBNL	muscleblind like splicing regulator 1	protein-coding
14-3	chr13	114320111	114320508	+	0.0666667	NA	intron (NM_001164145, intron 1 of 2)	intron (NM_001164145, intron 1 of 2)	5806	NM_032436	283489	Hs.7542	NM_032436	ENSG00000198824	CHAMP1	C13orf8|CAMP|CHAMP|MRD40|ZNF828	chromosome alignment maintaining phosphoprotein 1	protein-coding
14.3-6	chr16	68486574	68486964	+	0.0666667	NA	Intergenic	Intergenic	-38261	NM_018667	55512	Hs.368421	NM_018667	ENSG00000103056	SMPD3	NSMASE2	sphingomyelin phosphodiesterase 3	protein-coding
7.73333-2	chr8	81028925	81029155	+	0.0666667	NA	intron (NM_018440, intron 3 of 8)	intron (NM_018440, intron 3 of 8)	83028	NM_018440	55824	Hs.266175	NM_018440	ENSG00000076641	PAG1	CBP|PAG	phosphoprotein membrane anchor with glycosphingolipid microdomains 1	protein-coding
21.4-4	chr10	68056352	68056952	+	0.0666667	NA	intron (NM_001278185, intron 3 of 23)	intron (NM_001278185, intron 3 of 23)	18631	NM_001278185	26091	Hs.51891	NM_015601	ENSG00000148634	HERC4	-	HECT and RLD domain containing E3 ubiquitin protein ligase 4	protein-coding
36.8333-5	chr3	117168229	117168861	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	247114	NR_121607	100506724	Hs.125983	NR_121607	ENSG00000242385	LINC00901	LSAMP-AS4|TCONS_00005428	long intergenic non-protein coding RNA 901	ncRNA
9.2	chr2	39408384	39408554	+	0.0666667	NA	intron (NM_003618, intron 1 of 33)	Tigger2|DNA|TcMar-Tigger	28816	NM_003618	8491	Hs.655750	NM_003618	ENSG00000011566	MAP4K3	GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1	mitogen-activated protein kinase kinase kinase kinase 3	protein-coding
15-2	chr1	179666979	179667338	+	0.0666667	NA	intron (NM_001199091, intron 15 of 16)	MER5A1|DNA|hAT-Charlie	-60618	NR_138088	148753	Hs.400696	NM_173509	ENSG00000143340	FAM163A	C1orf76|NDSP	family with sequence similarity 163 member A	protein-coding
32.3667-7	chr6	124458193	124458851	+	0.0666667	NA	intron (NM_001300738, intron 4 of 7)	intron (NM_001300738, intron 4 of 7)	175517	NM_001300740	154215	Hs.656604	NM_153355	ENSG00000188580	NKAIN2	FAM77B|NKAIP2|TCBA|TCBA1	sodium/potassium transporting ATPase interacting 2	protein-coding
37.2333-2	chr12	24018533	24019528	+	0.0666667	NA	intron (NM_152989, intron 4 of 17)	AluJr|SINE|Alu	-67998	NM_001261415	6660	Hs.434948	NM_006940	ENSG00000134532	SOX5	L-SOX5|L-SOX5B|L-SOX5F|LAMSHF	SRY-box transcription factor 5	protein-coding
19.7667-12	chrX	123569933	123570379	+	0.0666667	NA	Intergenic	L1PBa|LINE|L1	162896	NM_001081550	57187	Hs.149991	NM_020449	ENSG00000125676	THOC2	CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120	THO complex 2	protein-coding
13.2667-6	chr2	115569811	115570160	+	0.0666667	NA	intron (NM_001321912, intron 6 of 25)	intron (NM_001321912, intron 6 of 25)	226170	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
18.2-14	chr4	125795767	125796281	+	0.0666667	NA	Intergenic	L1MEi|LINE|L1	288765	NR_031746	100302267		NR_031746	ENSG00000283550	MIR2054	hsa-mir-2054	microRNA 2054	ncRNA
15.8667-9	chr8	54196498	54196801	+	0.0666667	NA	Intergenic	L1MA4|LINE|L1	61408	NM_014175	29088	Hs.18349	NM_014175	ENSG00000137547	MRPL15	HSPC145|L15mt|MRP-L15|MRP-L7|RPML7	mitochondrial ribosomal protein L15	protein-coding
18.5667-6	chr2	17454465	17454994	+	0.0666667	NA	Intergenic	Intergenic	63711	NM_001099218	729475	Hs.515802	NM_001099218	ENSG00000214842	RAD51AP2	-	RAD51 associated protein 2	protein-coding
26.7667-4	chr11	15309838	15310360	+	0.0666667	NA	Intergenic	L3|LINE|CR1	160997	NM_001278315	387755	Hs.591997	NM_001031853	ENSG00000188487	INSC	-	INSC spindle orientation adaptor protein	protein-coding
14.5667-5	chr22	27489334	27489696	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	178864	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LINC02554	-	long intergenic non-protein coding RNA 2554	ncRNA
16.8-5	chr20	24269610	24270006	+	0.0666667	NA	Intergenic	AluSg|SINE|Alu	70041	NR_040102	400839	Hs.651965	NR_040102	ENSG00000230133	LINC01721	-	long intergenic non-protein coding RNA 1721	ncRNA
17.3667-7	chr3	177645768	177646247	+	0.0666667	NA	intron (NR_047568, intron 3 of 3)	L2b|LINE|L2	-170858	NR_110826	102724550	Hs.570526	NR_110826	ENSG00000231574	LINC02015	KCCAT211	long intergenic non-protein coding RNA 2015	ncRNA
18.7333-14	chr3	17954877	17955419	+	0.0666667	NA	Intergenic	L1MC5a|LINE|L1	-7404	NR_161333	339862	Hs.652981	NR_046199		LOC339862	-	uncharacterized LOC339862	ncRNA
7.5-2	chr2	179646429	179646542	+	0.0666667	NA	intron (NR_148056, intron 3 of 9)	L2a|LINE|L2	13709	NM_001352812	151126	Hs.655005	NM_152520	ENSG00000144331	ZNF385B	ZNF533	zinc finger protein 385B	protein-coding
17.6667-10	chr8	127390490	127390880	+	0.0666667	NA	intron (NR_117099, intron 3 of 3)	MIRb|SINE|MIR	-9714	NR_109834	101805488	Hs.745578	NR_109834	ENSG00000280997	CCAT2	LINC00873|NCCP1	colon cancer associated transcript 2	ncRNA
12.9667-10	chr8	127665923	127666275	+	0.0666667	NA	Intergenic	Intergenic	67868	NR_117101	100270680	Hs.333720	NR_117101	ENSG00000249375	CASC11	CARLO7|CARLo-7|LINC00990|TCONS_00014535	cancer susceptibility 11	ncRNA
13.2333-2	chr12	76471026	76471376	+	0.0666667	NA	intron (NM_020841, intron 2 of 23)	MIRb|SINE|MIR	-47916	NM_001319655	114882	Hs.430849	NM_020841	ENSG00000091039	OSBPL8	MST120|MSTP120|ORP8|OSBP10	oxysterol binding protein like 8	protein-coding
13.5-6	chr18	13890845	13891162	+	0.0666667	NA	intron (NM_001291911, intron 1 of 1)	LTR16B|LTR|ERVL	24533	NM_000529	4158	Hs.248144	NM_000529	ENSG00000185231	MC2R	ACTHR	melanocortin 2 receptor	protein-coding
38.0333	chr12	63117375	63118119	+	0.0666667	NA	Intergenic	L1PB4|LINE|L1	35063	NM_000706	552	Hs.2131	NM_000706	ENSG00000166148	AVPR1A	AVPR V1a|AVPR1|V1aR	arginine vasopressin receptor 1A	protein-coding
14.9667-2	chr14	49915155	49915442	+	0.0666667	NA	Intergenic	MLT1F2|LTR|ERVL-MaLR	22216	NM_001663	382	Hs.525330	NM_001663	ENSG00000165527	ARF6	-	ADP ribosylation factor 6	protein-coding
18.1-14	chr9	10455624	10456053	+	0.0666667	NA	intron (NM_002839, intron 2 of 45)	L4_B_Mam|LINE|RTE-X	157164	NM_002839	5789	Hs.446083	NM_002839	ENSG00000153707	PTPRD	HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA	protein tyrosine phosphatase receptor type D	protein-coding
14.7333-12	chr9	107808649	107808962	+	0.0666667	NA	Intergenic	Intergenic	-319036	NM_004235	9314	Hs.376206	NM_004235	ENSG00000136826	KLF4	EZF|GKLF	Kruppel like factor 4	protein-coding
17.4667-5	chr12	4562530	4563015	+	0.0666667	NA	intron (NM_001371301, intron 1 of 14)	intron (NM_001371301, intron 1 of 14)	564	NM_001371301								
17.8667-6	chr14	82584240	82584676	+	0.0666667	NA	Intergenic	Intergenic	-58174	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
27.0333-9	chr6	86618076	86618816	+	0.0666667	NA	Intergenic	L1MEf|LINE|L1	-319082	NM_000865	3354	Hs.1611	NM_000865	ENSG00000168830	HTR1E	5-HT1E	5-hydroxytryptamine receptor 1E	protein-coding
17.5-3	chr11	5256526	5256909	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-1936	NM_000184	3048	Hs.302145	NM_000184	ENSG00000196565	HBG2	HBG-T1|TNCY	hemoglobin subunit gamma 2	protein-coding
8.59999-2	chrX	58268585	58268824	+	0.0666667	NA	Intergenic	GSATX|Satellite|centr	-358071	NM_007156	7789	Hs.550094	NM_007156	ENSG00000198205	ZXDA	ZNF896	zinc finger X-linked duplicated A	protein-coding
10.0667-5	chr2	8774357	8774557	+	0.0666667	NA	intron (NM_001348732, intron 21 of 28)	L2a|LINE|L2	63156	NM_001348741	57498	Hs.9873	NM_020738	ENSG00000134313	KIDINS220	ARMS|SINO	kinase D interacting substrate 220	protein-coding
29.4667-5	chr2	121515946	121516456	+	0.0666667	NA	intron (NM_015282, intron 6 of 38)	L2c|LINE|L2	-14679	NR_023343	100151683	Hs.689638	NR_023343	ENSG00000264229	RNU4ATAC	MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC	RNA, U4atac small nuclear (U12-dependent splicing)	snRNA
11.4	chr1	194306729	194307063	+	0.0666667	NA	Intergenic	Intergenic	1002151	NR_125789	101929184	Hs.146728	NR_125789	ENSG00000232077	LINC01031	TCONS_00000361	long intergenic non-protein coding RNA 1031	ncRNA
26.9333-16	chr6	164057265	164058011	+	0.0666667	NA	Intergenic	Intergenic	-386154	NR_134620	102724152	Hs.738183	NR_134620		LOC102724152	-	uncharacterized LOC102724152	ncRNA
18.1-8	chr17	41985799	41986315	+	0.0666667	NA	intron (NM_003315, intron 9 of 13)	(A)n|Simple_repeat|Simple_repeat	18260	NM_001330216	1267	Hs.273621	NM_033133	ENSG00000173786	CNP	CNP1	2',3'-cyclic nucleotide 3' phosphodiesterase	protein-coding
26.6333-6	chr20	54589946	54590496	+	0.0666667	NA	intron (NM_018431, intron 4 of 7)	MIR|SINE|MIR	114628	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
21.0333-18	chr9	16502223	16502810	+	0.0666667	NA	intron (NM_001317939, intron 4 of 6)	intron (NM_001317939, intron 4 of 6)	-224298	NR_151723	111216284	Hs.609218	NR_151723	ENSG00000234779	BNC2-AS1	-	BNC2 antisense RNA 1	ncRNA
30.5-5	chr11	17465104	17465861	+	0.0666667	NA	intron (NR_147094, intron 3 of 37)	MIRc|SINE|MIR	11363	NR_147094	6833	Hs.54470	NM_000352	ENSG00000006071	ABCC8	ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2	ATP binding cassette subfamily C member 8	protein-coding
22.7-2	chr2	116195511	116195961	+	0.0666667	NA	Intergenic	L1M1|LINE|L1	851921	NM_001321913	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
22.3333-7	chr15	58467272	58467676	+	0.0666667	NA	intron (NR_120338, intron 2 of 2)	intron (NR_120338, intron 2 of 2)	31261	NR_120338	101928694	Hs.655781	NR_120338	ENSG00000259293	LIPC-AS1	-	LIPC antisense RNA 1	ncRNA
10.1667-7	chr7	141613207	141613359	+	0.0666667	NA	intron (NM_018238, intron 6 of 15)	intron (NM_018238, intron 6 of 15)	61873	NM_001364948	55750	Hs.685880	NM_018238	ENSG00000006530	AGK	CATC5|CTRCT38|MTDPS10|MULK	acylglycerol kinase	protein-coding
22.4333-15	chr7	6144391	6144857	+	0.0666667	NA	intron (NM_032172, intron 9 of 17)	AluSz6|SINE|Alu	27513	NM_001367582	9265	Hs.487479	NM_004227	ENSG00000008256	CYTH3	ARNO3|GRP1|PSCD3|cytohesin-3	cytohesin 3	protein-coding
12.4333-5	chr2	59511906	59512173	+	0.0666667	NA	Intergenic	MLT2B5|LTR|ERVL	294331	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
20.9-19	chr5	138888170	138888541	+	0.0666667	NA	intron (NM_001323986, intron 9 of 16)	intron (NM_001323986, intron 9 of 16)	12955	NM_001323988	1495	Hs.445981	NM_001903	ENSG00000044115	CTNNA1	CAP102|MDPT2	catenin alpha 1	protein-coding
17.1-6	chr12	65056739	65057234	+	0.0666667	NA	intron (NM_007191, intron 7 of 9)	intron (NM_007191, intron 7 of 9)	64319	NM_007191	11197	Hs.284122	NM_007191	ENSG00000156076	WIF1	WIF-1	WNT inhibitory factor 1	protein-coding
17.7333-16	chr7	85399433	85399930	+	0.0666667	NA	Intergenic	Intergenic	-21441	NR_134240	105375380	Hs.679608	NR_134240	ENSG00000225128	LINC00972	-	long intergenic non-protein coding RNA 972	ncRNA
8.46667-4	chr4	171271597	171271766	+	0.0666667	NA	Intergenic	Intergenic	85497	NR_106730	102466953		NR_106730	ENSG00000278502	MIR6082	hsa-mir-6082	microRNA 6082	ncRNA
30.9666	chr1	248590048	248590842	+	0.0666667	NA	Intergenic	Intergenic	3323	NM_001004693	127069	Hs.553585	NM_001004693	ENSG00000184022	OR2T10	OR1-64	olfactory receptor family 2 subfamily T member 10	protein-coding
10.1667-3	chr15	60133644	60133947	+	0.0666667	NA	Intergenic	Intergenic	129484	NM_012182	27023	Hs.734475	NM_012182	ENSG00000171956	FOXB1	FKH5|HFKH-5	forkhead box B1	protein-coding
22.7667-12	chr4	96625972	96626500	+	0.0666667	NA	intron (NR_147149, intron 3 of 3)	intron (NR_147149, intron 3 of 3)	315533	NR_147149	105377338		NR_147149		LINC02267	-	long intergenic non-protein coding RNA 2267	ncRNA
16.2667-12	chr7	7236570	7237022	+	0.0666667	NA	intron (NM_020156, intron 2 of 3)	AluSx3|SINE|Alu	-18358	NR_108073	101927354	Hs.520664	NR_108073		LOC101927354	-	uncharacterized LOC101927354	ncRNA
4.46667	chr10	44923271	44923338	+	0.0666667	NA	intron (NR_033842, intron 1 of 7)	(CT)n|Simple_repeat|Simple_repeat	11967	NM_001123376	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding
22.5667-8	chr6	154977996	154978514	+	0.0666667	NA	Intergenic	Intergenic	-112034	NM_012454	26230	Hs.586279	NM_012454	ENSG00000146426	TIAM2	STEF|TIAM-2	T cell lymphoma invasion and metastasis 2	protein-coding
5.96667-2	chr22	40409178	40409267	+	0.0666667	NA	exon (NM_001350042, exon 20 of 22)	exon (NM_001350042, exon 20 of 22)	38628	NM_001350046	27352	Hs.474914	NM_015705	ENSG00000100359	SGSM3	CIP85|MAP|RABGAP5|RUSC3|RUTBC3|RabGAP-5|rabGAPLP	small G protein signaling modulator 3	protein-coding
11.8667-3	chr8	100782273	100782577	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-60337	NM_002568	26986	Hs.387804	NM_002568	ENSG00000070756	PABPC1	PAB1|PABP|PABP1|PABPC2|PABPL1	poly(A) binding protein cytoplasmic 1	protein-coding
12.6667-5	chr21	29650217	29650548	+	0.0666667	NA	intron (NM_000830, intron 6 of 16)	intron (NM_000830, intron 6 of 16)	54342	NR_033368	100379661	Hs.659368	NR_033368	ENSG00000156273	GRIK1-AS2	C21orf41|NCRNA00258	GRIK1 antisense RNA 2	ncRNA
18.5333-9	chr16	66929899	66930236	+	0.0666667	NA	Intergenic	Intergenic	4335	NR_046109	51647	Hs.9825	NM_016062	ENSG00000166595	CIAO2B	CGI-128|CIA2B|FAM96B|MIP18	cytosolic iron-sulfur assembly component 2B	protein-coding
8.33333-2	chr12	26335090	26335248	+	0.0666667	NA	TTS (NM_002223)	TTS (NM_002223)	139596	NM_005086	8082	Hs.183428	NM_005086	ENSG00000123096	SSPN	DAGA5|KRAG|NSPN|SPN1|SPN2	sarcospan	protein-coding
24.3333-6	chr17	38883985	38884649	+	0.0666667	NA	intron (NM_001271608, intron 2 of 5)	intron (NM_001271608, intron 2 of 5)	14259	NM_006148	3927	Hs.741156	NM_006148	ENSG00000002834	LASP1	Lasp-1|MLN50	LIM and SH3 protein 1	protein-coding
32.9666-3	chr15	20373023	20373858	+	0.0666667	NA	Intergenic	AluY|SINE|Alu	67047	NR_036443	440248	Hs.531509	NM_199045	ENSG00000206149	HERC2P9	-	hect domain and RLD 2 pseudogene 9	pseudo
29.7-9	chr2	42299563	42300190	+	0.0666667	NA	intron (NM_001145076, intron 12 of 21)	AluSq|SINE|Alu	60162	NR_134948	9167	Hs.339639	NM_004718	ENSG00000115944	COX7A2L	COX7AR|COX7RP|EB1|SIG81	cytochrome c oxidase subunit 7A2 like	protein-coding
17.5667-8	chr2	103009639	103010064	+	0.0666667	NA	Intergenic	Intergenic	-25422	NR_135530	105373519		NR_135530	ENSG00000224095	LINC01935	-	long intergenic non-protein coding RNA 1935	ncRNA
8.9-5	chr4	66412160	66412293	+	0.0666667	NA	Intergenic	L1ME1|LINE|L1	135402	NR_031673	100302177		NR_031673	ENSG00000221563	MIR1269A	MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a	microRNA 1269a	ncRNA
20.5667	chr1	110679170	110679595	+	0.0666667	NA	Intergenic	L1PA7|LINE|L1	-4442	NM_002232	3738	Hs.169948	NM_002232	ENSG00000177272	KCNA3	HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3	potassium voltage-gated channel subfamily A member 3	protein-coding
21.4667-9	chr5	18060835	18061225	+	0.0666667	NA	Intergenic	L1PA4|LINE|L1	253756	NR_134287	646241	Hs.407197	NR_134286		LINC02223	-	long intergenic non-protein coding RNA 2223	ncRNA
26.5-2	chr12	119206042	119206546	+	0.0666667	NA	Intergenic	Intergenic	27504	NM_014365	26353	Hs.400095	NM_014365	ENSG00000152137	HSPB8	CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22	heat shock protein family B (small) member 8	protein-coding
6.3-5	chr7	856885	857058	+	0.0666667	NA	exon (NM_001367687, exon 17 of 17)	exon (NM_001367687, exon 17 of 17)	15597	NM_001367708	23353	Hs.438072	NM_025154	ENSG00000164828	SUN1	UNC84A	Sad1 and UNC84 domain containing 1	protein-coding
14.8-7	chr14	71802666	71802966	+	0.0666667	NA	Intergenic	Intergenic	-129355	NM_001370270	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G protein signaling 6	protein-coding
13-6	chr2	102293438	102293756	+	0.0666667	NA	Intergenic	Intergenic	-17905	NM_001282408	9173	Hs.66	NM_003856	ENSG00000115602	IL1RL1	DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1	interleukin 1 receptor like 1	protein-coding
14.3667-5	chr16	51997033	51997367	+	0.0666667	NA	Intergenic	MLT1O|LTR|ERVL-MaLR	76735	NM_001242473	388276	Hs.534669	NM_001242473		C16orf97	-	chromosome 16 open reading frame 97	protein-coding
17.6-4	chr15	50687715	50688082	+	0.0666667	NA	Intergenic	L1ME1|LINE|L1	-1101	NR_149152	54822	Hs.512894	NM_017672	ENSG00000092439	TRPM7	ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK	transient receptor potential cation channel subfamily M member 7	protein-coding
20.3-3	chr15	59897408	59897807	+	0.0666667	NA	Intergenic	MLT2C1|LTR|ERVL	-106704	NM_012182	27023	Hs.734475	NM_012182	ENSG00000171956	FOXB1	FKH5|HFKH-5	forkhead box B1	protein-coding
5.3	chr7	10551912	10552031	+	0.0666667	NA	intron (NR_147499, intron 2 of 2)	intron (NR_147499, intron 2 of 2)	-150705	NR_149037	100131472	Hs.170681	NR_149037		LOC100131472	-	uncharacterized LOC100131472	ncRNA
17.8333-14	chr8	95236379	95236891	+	0.0666667	NA	Intergenic	Intergenic	-20261	NR_046232	619344	Hs.741630	NR_046232	ENSG00000253351	LINC01298	C8orf69	long intergenic non-protein coding RNA 1298	ncRNA
9.16667-2	chr4	4411851	4411988	+	0.0666667	NA	intron (NM_014392, intron 4 of 4)	Tigger3b|DNA|TcMar-Tigger	24956	NM_014392	27065	Hs.518595	NM_014392	ENSG00000168824	NSG1	D4S234|D4S234E|NEEP21|P21	neuronal vesicle trafficking associated 1	protein-coding
20.8667-9	chr9	17105633	17106121	+	0.0666667	NA	Intergenic	L1MA9|LINE|L1	-29163	NM_001365029	54875	Hs.435381	NM_017738	ENSG00000044459	CNTLN	C9orf101|C9orf39|bA340N12.1	centlein	protein-coding
9.93334-3	chr6	35287522	35287697	+	0.0666667	NA	intron (NM_001292032, intron 4 of 12)	intron (NM_001292032, intron 4 of 12)	-10209	NM_022047	50619	Hs.15476	NM_022047	ENSG00000023892	DEF6	IBP|SLAT|SWAP70L	DEF6 guanine nucleotide exchange factor	protein-coding
10-3	chr7	54776730	54776902	+	0.0666667	NA	intron (NR_110040, intron 1 of 2)	intron (NR_110040, intron 1 of 2)	17503	NR_110040	100996654	Hs.127991	NR_110040		LOC100996654	-	uncharacterized LOC100996654	ncRNA
30.6-6	chr2	9744163	9744784	+	0.0666667	NA	Intergenic	Intergenic	-98969	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	TATA-box binding protein associated factor, RNA polymerase I subunit B	protein-coding
18-10	chr2	80455460	80455781	+	0.0666667	NA	intron (NM_001282599, intron 3 of 11)	intron (NM_001282599, intron 3 of 11)	142241	NM_001282599	1496	Hs.167368	NM_004389	ENSG00000066032	CTNNA2	CAP-R|CAPR|CDCBM9|CT114|CTNR	catenin alpha 2	protein-coding
23.2333	chr1	41014966	41015546	+	0.0666667	NA	TTS (NM_144990)	TTS (NM_144990)	666	NR_037868	100507178	Hs.660056	NR_037868	ENSG00000281207	SLFNL1-AS1	-	SLFNL1 antisense RNA 1	ncRNA
10.7667-4	chr2	64298361	64298633	+	0.0666667	NA	Intergenic	Intergenic	-42262	NR_039632	100616265		NR_039632	ENSG00000283222	MIR4433A	MIR4433|hsa-mir-4433a	microRNA 4433a	ncRNA
15.7333-2	chr1	240356011	240356393	+	0.0666667	NA	intron (NM_020066, intron 14 of 17)	intron (NM_020066, intron 14 of 17)	255953	NM_022469	64388	Hs.98206	NM_022469	ENSG00000180875	GREM2	CKTSF1B2|DAND3|PRDC|STHAG9	gremlin 2, DAN family BMP antagonist	protein-coding
14.3-12	chr5	117012295	117012655	+	0.0666667	NA	Intergenic	HSMAR1|DNA|TcMar-Mariner	-250266	NR_104678	102467223	Hs.570916	NR_104678		LINC02214	-	long intergenic non-protein coding RNA 2214	ncRNA
12.4333-3	chr16	51241051	51241237	+	0.0666667	NA	intron (NR_039672, intron 6 of 6)	MSTB1|LTR|ERVL-MaLR	-89872	NM_002968	6299	Hs.135787	NM_002968	ENSG00000103449	SALL1	HEL-S-89|HSAL1|Sal-1|TBS|ZNF794	spalt like transcription factor 1	protein-coding
6.3	chr17	11145757	11145851	+	0.0666667	NA	Intergenic	LTR16B2|LTR|ERVL	-95409	NM_207386	388336	Hs.592124	NM_175903	ENSG00000188803	SHISA6	-	shisa family member 6	protein-coding
35.9-7	chr8	108368618	108369345	+	0.0666667	NA	Intergenic	Intergenic	-74602	NR_138033	9694	Hs.654351	NM_014673	ENSG00000104412	EMC2	KIAA0103|TTC35	ER membrane protein complex subunit 2	protein-coding
22.8666-6	chr18	10023542	10024198	+	0.0666667	NA	Intergenic	Intergenic	109854	NM_194434	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding
15.6667-3	chr2	16638351	16638719	+	0.0666667	NA	intron (NM_030797, intron 1 of 11)	intron (NM_030797, intron 1 of 11)	27299	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding
10.5333-5	chr3	104242689	104242885	+	0.0666667	NA	Intergenic	L1MA6|LINE|L1	-718671	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
11.5	chr1	100912864	100913043	+	0.0666667	NA	intron (NM_133496, intron 5 of 10)	intron (NM_133496, intron 5 of 10)	16863	NM_133496	148867	Hs.533903	NM_133496	ENSG00000162695	SLC30A7	ZNT7|ZnT-7|ZnTL2	solute carrier family 30 member 7	protein-coding
4.3-3	chr4	52476204	52476268	+	0.0666667	NA	Intergenic	L1MB7|LINE|L1	180303	NM_001134223	64854	Hs.7966	NM_022832	ENSG00000109189	USP46	-	ubiquitin specific peptidase 46	protein-coding
25.5667-15	chr7	24311343	24311880	+	0.0666667	NA	Intergenic	LTR33|LTR|ERVL	27421	NM_000905	4852	Hs.1832	NM_000905	ENSG00000122585	NPY	PYY4	neuropeptide Y	protein-coding
11.6-3	chr10	124304359	124304547	+	0.0666667	NA	Intergenic	MamGypLTR1b|LTR|Gypsy	114470	NM_001322971	4942	Hs.523332	NM_000274	ENSG00000065154	OAT	GACR|HOGA|OATASE|OKT	ornithine aminotransferase	protein-coding
24.7667-12	chr9	134540785	134541341	+	0.0666667	NA	Intergenic	Intergenic	-100742	NM_001278074	1289	Hs.210283	NM_000093	ENSG00000130635	COL5A1	EDSC|EDSCL1	collagen type V alpha 1 chain	protein-coding
5.63333	chr2	125712906	125713043	+	0.0666667	NA	Intergenic	Intergenic	405011	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
23.2-2	chr10	89575277	89575892	+	0.0666667	NA	Intergenic	Intergenic	17243	NR_029524	406901		NR_029524	ENSG00000198997	MIR107	MIRN107|miR-107	microRNA 107	ncRNA
14.6-9	chr22	20520275	20520595	+	0.0666667	NA	intron (NM_001293237, intron 1 of 16)	intron (NM_001293237, intron 1 of 16)	12388	NM_001293237	51586	Hs.517421	NM_015889	ENSG00000099917	MED15	ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7	mediator complex subunit 15	protein-coding
29.7666-3	chr8	119343610	119344485	+	0.0666667	NA	Intergenic	Intergenic	18876	NR_106755	102466162		NR_106755	ENSG00000276479	MIR548AZ	hsa-mir-548az	microRNA 548az	ncRNA
23.6667-13	chr8	143504760	143505177	+	0.0666667	NA	intron (NM_015117, intron 4 of 11)	intron (NM_015117, intron 4 of 11)	1280	NR_145785	109623485		NR_145785		SNORD149	-	small nucleolar RNA, C/D box 149	snoRNA
40.8-5	chr3	13549954	13550889	+	0.0666667	NA	intron (NM_001004019, intron 1 of 17)	intron (NM_001004019, intron 1 of 17)	1296	NM_001004019	2199	Hs.198862	NM_001998	ENSG00000163520	FBLN2	-	fibulin 2	protein-coding
12.0667-4	chr13	101511612	101511801	+	0.0666667	NA	intron (NM_001271756, intron 1 of 9)	MLT1E1|LTR|ERVL-MaLR	21754	NM_001271756	9358	Hs.696554	NM_004791	ENSG00000198542	ITGBL1	OSCP|TIED	integrin subunit beta like 1	protein-coding
17.7-5	chr14	59684459	59684907	+	0.0666667	NA	intron (NM_021136, intron 3 of 8)	HAL1ME|LINE|L1	-37663	NR_049851	100847088		NR_049851	ENSG00000263629	MIR5586	-	microRNA 5586	ncRNA
4.03334	chr9	137039256	137039316	+	0.0666667	NA	TTS (NM_015392)	TTS (NM_015392)	-6446	NM_004479	2529	Hs.457	NM_004479	ENSG00000180549	FUT7	FucT-VII	fucosyltransferase 7	protein-coding
23.6333-4	chr14	64339498	64340137	+	0.0666667	NA	Intergenic	AluSp|SINE|Alu	-1204	NR_073496	2100	Hs.660607	NM_001437	ENSG00000140009	ESR2	ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2|ODG8	estrogen receptor 2	protein-coding
23.4333-14	chr8	127220028	127220594	+	0.0666667	NA	Intergenic	Intergenic	-1043	NR_108049	100507056	Hs.343864	NR_108049		CCAT1	CARLO5|CARLo-5|onco-lncRNA-40	colon cancer associated transcript 1	ncRNA
17.8333-7	chr6	35722364	35722631	+	0.0666667	NA	intron (NM_001145775, intron 1 of 11)	intron (NM_001145775, intron 1 of 11)	6086	NM_001145775	2289	Hs.407190	NM_004117	ENSG00000096060	FKBP5	AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10	FKBP prolyl isomerase 5	protein-coding
12.4667-2	chr15	38894926	38895153	+	0.0666667	NA	Intergenic	Intergenic	198441	NR_160786								
17.1-2	chr1	161174292	161174663	+	0.0666667	NA	intron (NM_001199873, intron 4 of 7)	intron (NM_001199873, intron 4 of 7)	3030	NM_003779	8703	Hs.321231	NM_003779	ENSG00000158850	B4GALT3	beta4Gal-T3	beta-1,4-galactosyltransferase 3	protein-coding
12.9333-8	chr22	26312956	26313284	+	0.0666667	NA	intron (NM_001184776, intron 8 of 14)	intron (NM_001184776, intron 8 of 14)	-116140	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding
7.93334	chr12	60446136	60446255	+	0.0666667	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	756825	NR_073056	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding
21.5666-3	chr6	51148234	51148859	+	0.0666667	NA	Intergenic	Intergenic	329675	NM_003221	7021	Hs.33102	NM_003221	ENSG00000008196	TFAP2B	AP-2B|AP2-B|PDA2	transcription factor AP-2 beta	protein-coding
12.1-2	chr1	174051567	174051886	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	-58654	NM_001300852	149041	Hs.30258	NM_172071	ENSG00000135870	RC3H1	RNF198|ROQUIN	ring finger and CCCH-type domains 1	protein-coding
30.6667-2	chr11	3645243	3645812	+	0.0666667	NA	intron (NM_004314, intron 1 of 4)	intron (NM_004314, intron 1 of 4)	399	NM_004314	417	Hs.382188	NM_004314	ENSG00000129744	ART1	ART2|ARTC1|CD296|RT6	ADP-ribosyltransferase 1	protein-coding
9.6-7	chr5	120414662	120414896	+	0.0666667	NA	Intergenic	Intergenic	-49499	NM_016644	51334	Hs.157461	NM_016644	ENSG00000184838	PRR16	DSC54|LARGEN	proline rich 16	protein-coding
16.5-11	chr8	75774384	75774829	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	234638	NM_004133	3174	Hs.241529	NM_004133	ENSG00000164749	HNF4G	NR2A2|NR2A3	hepatocyte nuclear factor 4 gamma	protein-coding
10.3-10	chrUn_GL000216v2	59917	60113	+	0.0666667	NA	NA	(TTCCATTCCA)n|Simple_repeat|Simple_repeat	NA	NA								
18.9333	chr1	183083892	183084392	+	0.0666667	NA	intron (NM_002293, intron 1 of 27)	AluYc|SINE|Alu	57128	NR_149048	110841583	Hs.604063	NR_149048	ENSG00000224468	LAMC1-AS1	lnc-LAMC2-1:1	LAMC1 antisense RNA 1	ncRNA
19.6-7	chr16	53583989	53584387	+	0.0666667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-80884	NM_001308325	64400	Hs.380897	NM_022476	ENSG00000166971	AKTIP	FT1|FTS	AKT interacting protein	protein-coding
32.9333-5	chr2	208103794	208104412	+	0.0666667	NA	Intergenic	Intergenic	-15026	NR_038437	100507443	Hs.570295	NR_038437		LOC100507443	-	uncharacterized LOC100507443	ncRNA
28.1-9	chr5	126167674	126168308	+	0.0666667	NA	Intergenic	L1M2|LINE|L1	-11586	NR_105042	102546228	Hs.582529	NR_105042	ENSG00000248107	LINC02039	-	long intergenic non-protein coding RNA 2039	ncRNA
14.4667	chr1	43877462	43877882	+	0.0666667	NA	intron (NR_073021, intron 6 of 9)	L2|LINE|L2	39050	NR_106727	102464830		NR_106727	ENSG00000283477	MIR6079	hsa-mir-6079	microRNA 6079	ncRNA
8.1-4	chr7	83394171	83394292	+	0.0666667	NA	intron (NM_001178129, intron 13 of 16)	intron (NM_001178129, intron 13 of 16)	-231347	NM_033026	27445	Hs.12376	NM_014510	ENSG00000186472	PCLO	ACZ|PCH3	piccolo presynaptic cytomatrix protein	protein-coding
27.3-3	chr18	64859712	64860462	+	0.0666667	NA	Intergenic	Intergenic	-600032	NR_033983	400654	Hs.434235	NR_033983	ENSG00000266952	LINC01538	-	long intergenic non-protein coding RNA 1538	ncRNA
21.8333-16	chrUn_KI270442v1	83042	83627	+	0.0666667	NA	NA	(AATGG)n|Simple_repeat|Simple_repeat	NA	NA								
31.3-12	chr7	7500296	7500844	+	0.0666667	NA	intron (NM_001037763, intron 11 of 34)	intron (NM_001037763, intron 11 of 34)	35303	NM_001037763	340267	Hs.491104	NM_001037763	ENSG00000215018	COL28A1	COL28	collagen type XXVIII alpha 1 chain	protein-coding
8.36666	chr10	89016080	89016270	+	0.0666667	NA	non-coding (NR_028035, exon 7 of 7)	non-coding (NR_028035, exon 7 of 7)	-23200	NR_028371	100302740	Hs.244139	NR_028371		FAS-AS1	FAS-AS|FASAS|SAF	FAS antisense RNA 1	ncRNA
24.1333-7	chr19	5495395	5495904	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	40232	NM_181710	148066	Hs.126496	NM_181710	ENSG00000105428	ZNRF4	RNF204|SPERIZIN|Ssrzf1|spzn	zinc and ring finger 4	protein-coding
10.0667-4	chr18	38366528	38366681	+	0.0666667	NA	Intergenic	Intergenic	709469	NR_036202	100422857		NR_036202	ENSG00000266530	MIR4318	-	microRNA 4318	ncRNA
14.4-16	chr7	19259212	19259494	+	0.0666667	NA	Intergenic	L1PA16|LINE|L1	-113932	NM_152898	222894	Hs.592168	NM_152898	ENSG00000146618	FERD3L	N-TWIST|NATO3|NTWIST|PTFB|bHLHa31	Fer3 like bHLH transcription factor	protein-coding
28.7667-3	chr2	104463108	104463819	+	0.0666667	NA	intron (NR_015399, intron 1 of 3)	Tigger3a|DNA|TcMar-Tigger	29116	NR_015399	150568	Hs.107284	NR_015399	ENSG00000235597	LINC01102	-	long intergenic non-protein coding RNA 1102	ncRNA
29.9-6	chr5	67511314	67512096	+	0.0666667	NA	Intergenic	L1M8|LINE|L1	135084	NR_147169	105379006		NR_147169	ENSG00000249736	LINC02242	-	long intergenic non-protein coding RNA 2242	ncRNA
17.9333-11	chr4	23599491	23599922	+	0.0666667	NA	Intergenic	Intergenic	281586	NM_001330753	10891	Hs.527078	NM_013261	ENSG00000109819	PPARGC1A	LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1	PPARG coactivator 1 alpha	protein-coding
10.6-4	chr6	150379187	150379437	+	0.0666667	NA	intron (NM_001318495, intron 1 of 4)	L2|LINE|L2	10300	NR_134655	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding
17.5333-15	chr6	47007140	47007510	+	0.0666667	NA	intron (NM_153840, intron 11 of 14)	intron (NM_153840, intron 11 of 14)	35007	NM_025048	266977	Hs.733762	NM_025048	ENSG00000153292	ADGRF1	GPR110|KPG_012|PGR19|hGPCR36	adhesion G protein-coupled receptor F1	protein-coding
26.2666-2	chr2	188066928	188067650	+	0.0666667	NA	intron (NR_126396, intron 2 of 2)	intron (NR_126396, intron 2 of 2)	220402	NR_126396	104355152		NR_126396	ENSG00000231689	LINC01090	-	long intergenic non-protein coding RNA 1090	ncRNA
24.4-22	chr3	102993206	102993669	+	0.0666667	NA	Intergenic	THE1C|LTR|ERVL-MaLR	530679	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
12.6667-2	chr16	81905962	81906210	+	0.0666667	NA	intron (NM_002661, intron 15 of 32)	L1MC4a|LINE|L1	105384	NM_145168	93517	Hs.87779	NM_145168	ENSG00000184860	SDR42E1	HSPC105	short chain dehydrogenase/reductase family 42E, member 1	protein-coding
26.2666	chr16	9823754	9824501	+	0.0666667	NA	intron (NM_001134408, intron 9 of 13)	intron (NM_001134408, intron 9 of 13)	357940	NM_001134408	2903	Hs.411472	NM_000833	ENSG00000183454	GRIN2A	EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A	glutamate ionotropic receptor NMDA type subunit 2A	protein-coding
19.3333-16	chr7	86606535	86607039	+	0.0666667	NA	Intergenic	L1MEf|LINE|L1	-37122	NM_001363522	2913	Hs.590575	NM_000840	ENSG00000198822	GRM3	GLUR3|GPRC1C|MGLUR3|mGlu3	glutamate metabotropic receptor 3	protein-coding
8.73333-5	chr5	54949184	54949430	+	0.0666667	NA	Intergenic	L2|LINE|L2	36286	NM_001135604	11082	Hs.129944	NM_007036	ENSG00000164283	ESM1	endocan	endothelial cell specific molecule 1	protein-coding
19.7333-7	chr7	49402915	49403407	+	0.0666667	NA	Intergenic	L1MC5a|LINE|L1	-370477	NM_198570	375567	Hs.629302	NM_198570	ENSG00000188730	VWC2	PSST739|UNQ739	von Willebrand factor C domain containing 2	protein-coding
9.16666	chr1	105018280	105018542	+	0.0666667	NA	Intergenic	MER72B|LTR|ERV1	600524	NR_125954	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
23.5667	chr1	210576732	210577264	+	0.0666667	NA	intron (NM_001122834, intron 9 of 11)	L1M3|LINE|L1	247632	NM_001170580	55733	Hs.58650	NM_018194	ENSG00000054392	HHAT	MART2|SKI1|Skn	hedgehog acyltransferase	protein-coding
14.5-5	chr17	57878313	57878629	+	0.0666667	NA	intron (NM_001271875, intron 3 of 10)	intron (NM_001271875, intron 3 of 10)	24918	NM_001292025	404093	Hs.46679	NM_001271875	ENSG00000180891	CUEDC1	-	CUE domain containing 1	protein-coding
21.9333-7	chr12	62920996	62921431	+	0.0666667	NA	intron (NM_020700, intron 1 of 9)	AluSx1|SINE|Alu	13937	NM_020700	57460	Hs.435479	NM_020700	ENSG00000111110	PPM1H	ARHCL1|NERPP-2C|URCC2	protein phosphatase, Mg2+/Mn2+ dependent 1H	protein-coding
16.6333-4	chr17	59490880	59491253	+	0.0666667	NA	intron (NR_110813, intron 2 of 2)	intron (NR_110813, intron 2 of 2)	35791	NR_110813	101927728	Hs.569720	NR_110813	ENSG00000265313	LINC01476	-	long intergenic non-protein coding RNA 1476	ncRNA
12.5667-6	chr2	57877208	57877565	+	0.0666667	NA	Intergenic	Intergenic	-30265	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
26.4-10	chr8	113550418	113550965	+	0.0666667	NA	Intergenic	Intergenic	-113752	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
12.8333-13	chr9	102766986	102767346	+	0.0666667	NA	Intergenic	LTR33A_|LTR|ERVL	-228167	NM_001340	1539	Hs.3232	NM_001340	ENSG00000155833	CYLC2	-	cylicin 2	protein-coding
18.1333-15	chr6	85532903	85533366	+	0.0666667	NA	intron (NM_001350538, intron 18 of 28)	AluSx|SINE|Alu	60724	NM_153816	57231	Hs.485871	NM_020468	ENSG00000135317	SNX14	RGS-PX2|SCAR20	sorting nexin 14	protein-coding
11.3-5	chr5	126624383	126624652	+	0.0666667	NA	intron (NM_032177, intron 4 of 4)	intron (NM_032177, intron 4 of 4)	-7188	NM_207408	389320	Hs.177983	NM_207408	ENSG00000196900	TEX43	C5orf48|Tseg7	testis expressed 43	protein-coding
18.0333-7	chr22	32059892	32060342	+	0.0666667	NA	intron (NM_001256314, intron 1 of 13)	(AC)n|Simple_repeat|Simple_repeat	947	NM_001256314	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding
19.4333-8	chr4	167478610	167479188	+	0.0666667	NA	Intergenic	Intergenic	-244309	NM_016950	50859	Hs.481133	NM_016950	ENSG00000196104	SPOCK3	HSAJ1454|TES-3|TICN3	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3	protein-coding
12.8667	chr11	80415538	80415922	+	0.0666667	NA	Intergenic	Intergenic	347073	NR_120570	101928944	Hs.547927	NR_120570	ENSG00000255178	LINC02720	-	long intergenic non-protein coding RNA 2720	ncRNA
11.2333-5	chr19	58389463	58389631	+	0.0666667	NA	intron (NM_001009, intron 2 of 5)	intron (NM_001009, intron 2 of 5)	2278	NM_001009	6193	Hs.378103	NM_001009	ENSG00000083845	RPS5	S5	ribosomal protein S5	protein-coding
23.0667-9	chr19	29908879	29909404	+	0.0666667	NA	Intergenic	Intergenic	-14516	NM_001252641	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	URI1 prefoldin like chaperone	protein-coding
16.4333-8	chr8	73180001	73180393	+	0.0666667	NA	Intergenic	L1PB2|LINE|L1	79305	NM_001243237	100130301	Hs.202296	NM_001243237	ENSG00000274443	C8orf89	-	chromosome 8 open reading frame 89	protein-coding
13.9-7	chr7	75052330	75052657	+	0.0666667	NA	intron (NM_030798, intron 10 of 10)	intron (NM_030798, intron 10 of 10)	21309	NM_001363447	81554	Hs.529623	NM_030798	ENSG00000274523	RCC1L	WBSCR16	RCC1 like	protein-coding
18.5666-3	chr7	134101668	134102211	+	0.0666667	NA	Intergenic	Intergenic	-25401	NM_144648	136332	Hs.149774	NM_144648	ENSG00000155530	LRGUK	CFAP246	leucine rich repeats and guanylate kinase domain containing	protein-coding
16.5333-11	chr8	120821043	120821477	+	0.0666667	NA	Intergenic	L1MC4|LINE|L1	-9214	NM_021021	6641	Hs.46701	NM_021021	ENSG00000172164	SNTB1	59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43	syntrophin beta 1	protein-coding
16.5333-6	chr2	200604232	200604538	+	0.0666667	NA	intron (NM_001159, intron 8 of 34)	intron (NM_001159, intron 8 of 34)	18371	NM_001159	316	Hs.406238	NM_001159	ENSG00000138356	AOX1	AO|AOH1	aldehyde oxidase 1	protein-coding
18.4667-7	chr2	54905746	54906272	+	0.0666667	NA	intron (NM_001039753, intron 23 of 40)	L1MB3|LINE|L1	104263	NM_007008	57142	Hs.637850	NM_007008	ENSG00000115310	RTN4	ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C	reticulon 4	protein-coding
25.3-5	chr13	49190619	49191149	+	0.0666667	NA	intron (NM_001079673, intron 17 of 25)	intron (NM_001079673, intron 17 of 25)	-29454	NM_001507	2862	Hs.248126	NM_001507	ENSG00000102539	MLNR	GPR38|MTLR1	motilin receptor	protein-coding
19.6-8	chr19	51212991	51213548	+	0.0666667	NA	Intergenic	L1MB7|LINE|L1	-6260	NR_107041	102465873		NR_107041	ENSG00000278617	MIR8074	hsa-mir-8074	microRNA 8074	ncRNA
15.4-7	chr11	43024626	43025040	+	0.0666667	NA	Intergenic	Intergenic	244536	NR_033868	399881	Hs.446761	NR_033868	ENSG00000251557	HNRNPKP3	-	heterogeneous nuclear ribonucleoprotein K pseudogene 3	pseudo
18.4667-8	chr6	161805559	161805982	+	0.0666667	NA	intron (NM_004562, intron 6 of 11)	intron (NM_004562, intron 6 of 11)	334793	NR_134594	105378098	Hs.691066	NR_134593		LOC105378098	-	uncharacterized LOC105378098	ncRNA
15.4333-9	chr3	167480203	167480607	+	0.0666667	NA	intron (NM_001348951, intron 18 of 18)	intron (NM_001348951, intron 18 of 18)	-6273	NM_006217	5276	Hs.445555	NM_006217	ENSG00000114204	SERPINI2	MEPI|PANCPIN|PI14|TSA2004	serpin family I member 2	protein-coding
24.2-2	chr14	42406546	42407070	+	0.0666667	NA	Intergenic	MLT2B3|LTR|ERVL	799952	NR_144388	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding
7.56667	chr12	31676659	31676781	+	0.0666667	NA	intron (NR_103522, intron 7 of 8)	intron (NR_103522, intron 7 of 8)	17032	NM_001135863	254013	Hs.740628	NM_173802	ENSG00000139160	ETFBKMT	C12orf72|ETFB-KMT|METTL20	electron transfer flavoprotein subunit beta lysine methyltransferase	protein-coding
7.16667	chr15	96617232	96617340	+	0.0666667	NA	Intergenic	Intergenic	164368	NR_102754	100652749	Hs.303588	NR_102753	ENSG00000259282	SPATA8-AS1	-	SPATA8 antisense RNA 1 (head to head)	ncRNA
24.5667-3	chr11	26095370	26095784	+	0.0666667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-93546	NM_001313726	63982	Hs.91791	NM_031418	ENSG00000134343	ANO3	C11orf25|DYT23|DYT24|GENX-3947|TMEM16C	anoctamin 3	protein-coding
21.9333	chr1	42987840	42988326	+	0.0666667	NA	Intergenic	L1MCa|LINE|L1	29034	NR_033967	440584	Hs.260928	NR_033967	ENSG00000227533	SLC2A1-AS1	-	SLC2A1 antisense RNA 1	ncRNA
21.3-21	chr9	86320555	86321115	+	0.0666667	NA	intron (NM_001185059, intron 14 of 26)	intron (NM_001185059, intron 14 of 26)	33575	NM_001330718	79670	Hs.597057	NM_024617	ENSG00000083223	TUT7	PAPD6|TENT3B|ZCCHC6	terminal uridylyl transferase 7	protein-coding
17.7333-7	chr16	55569404	55569891	+	0.0666667	NA	intron (NM_017839, intron 11 of 13)	intron (NM_017839, intron 11 of 13)	2963	NM_032330	84290	Hs.660027	NM_032330	ENSG00000256812	CAPNS2	CSS2	calpain small subunit 2	protein-coding
22.1333-15	chr8	82303642	82304190	+	0.0666667	NA	Intergenic	MER67D|LTR|ERV1	-461630	NM_022133	64089	Hs.492121	NM_022133	ENSG00000104497	SNX16	-	sorting nexin 16	protein-coding
16.3-4	chr16	63770646	63771067	+	0.0666667	NA	Intergenic	Intergenic	1351207	NM_001330576	1009	Hs.116471	NM_001797	ENSG00000140937	CDH11	CAD11|CDHOB|ESWS|OB|OSF-4	cadherin 11	protein-coding
15.0667-9	chr2	42872078	42872403	+	0.0666667	NA	Intergenic	(AG)n|Simple_repeat|Simple_repeat	-79657	NM_012205	23498	Hs.368805	NM_012205	ENSG00000162882	HAAO	3-HAO|HAO|VCRL1|h3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
13.1333	chr1	10760542	10760922	+	0.0666667	NA	5' UTR (NM_017766, exon 2 of 16)	5' UTR (NM_017766, exon 2 of 16)	35914	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding
9.03334-2	chrX	50202179	50202314	+	0.0666667	NA	Intergenic	MER67D|LTR|ERV1	-1239	NM_003886	8852	Hs.97633	NM_003886	ENSG00000147081	AKAP4	AKAP 82|AKAP-4|AKAP82|CT99|FSC1|HI|PRKA4|hAKAP82|p82	A-kinase anchoring protein 4	protein-coding
25.5333-6	chr20	24100900	24101537	+	0.0666667	NA	Intergenic	Tigger7|DNA|TcMar-Tigger	-98549	NR_040102	400839	Hs.651965	NR_040102	ENSG00000230133	LINC01721	-	long intergenic non-protein coding RNA 1721	ncRNA
12.8667-8	chr6	110458253	110458517	+	0.0666667	NA	intron (NM_033125, intron 1 of 7)	LTR13|LTR|ERVK	18228	NM_033125	85413	Hs.520319	NM_033125	ENSG00000004809	SLC22A16	CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1	solute carrier family 22 member 16	protein-coding
27.1667-5	chr4	92176161	92176805	+	0.0666667	NA	Intergenic	Intergenic	100819	NR_125920	101929194	Hs.626389	NR_125920		LNCPRESS2	-	lncRNA p53 regulated and ESC associated 2	ncRNA
9.2-2	chr2	57466544	57466751	+	0.0666667	NA	Intergenic	L1PA16|LINE|L1	-441004	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
10.1667	chr11	106465493	106465645	+	0.0666667	NA	Intergenic	Intergenic	214162	NR_120551	101928535	Hs.409078	NR_120551	ENSG00000254811	LOC101928535	-	uncharacterized LOC101928535	ncRNA
13.1-2	chr2	146080107	146080358	+	0.0666667	NA	Intergenic	Intergenic	-506825	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
8.53333-2	chr11	133896767	133896993	+	0.0666667	NA	non-coding (NR_024344, exon 1 of 1)	non-coding (NR_024344, exon 1 of 1)	1701	NR_039846	100616119		NR_039846	ENSG00000284020	MIR4697	-	microRNA 4697	ncRNA
18.8-4	chr14	83472599	83473149	+	0.0666667	NA	Intergenic	Intergenic	830242	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
18.2667-7	chr16	46398928	46399318	+	0.0666667	NA	Intergenic	Intergenic	169974	NR_026556	124149	Hs.97414	NM_001004299		ANKRD26P1	-	ankyrin repeat domain 26 pseudogene 1	pseudo
28.5667-7	chr19	6799031	6799516	+	0.0666667	NA	intron (NM_001258206, intron 1 of 25)	AluSx3|SINE|Alu	26565	NM_001258206	7409	Hs.116237	NM_005428	ENSG00000141968	VAV1	VAV	vav guanine nucleotide exchange factor 1	protein-coding
23.5333-7	chr2	139946711	139947313	+	0.0666667	NA	Intergenic	LTR16A|LTR|ERVL	639673	NR_106979	102465692		NR_106979	ENSG00000283506	MIR7157	hsa-mir-7157	microRNA 7157	ncRNA
29.1667-9	chr20	47849896	47850454	+	0.0666667	NA	Intergenic	MLT1F2|LTR|ERVL-MaLR	-63559	NM_198596	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding
21.3667-7	chr2	107411351	107411814	+	0.0666667	NA	Intergenic	Intergenic	-62057	NR_049853	100847045		NR_049853	ENSG00000283146	MIR548AU	-	microRNA 548au	ncRNA
20.5667-2	chr11	39110325	39110864	+	0.0666667	NA	Intergenic	L1ME4c|LINE|L1	461736	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
18.4667-6	chr2	54259092	54259540	+	0.0666667	NA	intron (NM_138448, intron 3 of 3)	L2a|LINE|L2	-3087	NM_001003937	388951	Hs.620508	NM_001003937	ENSG00000178021	TSPYL6	-	TSPY like 6	protein-coding
22.3-5	chr13	71959893	71960438	+	0.0666667	NA	Intergenic	Intergenic	-92961	NM_001366712	1602	Hs.129452	NM_004392	ENSG00000276644	DACH1	DACH	dachshund family transcription factor 1	protein-coding
9.13334	chr13	69534878	69535015	+	0.0666667	NA	Intergenic	Intergenic	312600	NR_125752	103689913	Hs.585628	NR_125752	ENSG00000235221	LINC00383	LINC00401	long intergenic non-protein coding RNA 383	ncRNA
21.7-11	chr4	96740918	96741443	+	0.0666667	NA	intron (NR_147149, intron 3 of 3)	intron (NR_147149, intron 3 of 3)	430477	NR_147149	105377338		NR_147149		LINC02267	-	long intergenic non-protein coding RNA 2267	ncRNA
19.0333-14	chr7	72337483	72337967	+	0.0666667	NA	promoter-TSS (NM_001017440)	promoter-TSS (NM_001017440)	-334	NM_001017440	83698	Hs.592750	NM_031468	ENSG00000183166	CALN1	CABP8	calneuron 1	protein-coding
8.86666-4	chr6	86313268	86313498	+	0.0666667	NA	Intergenic	L1MA2|LINE|L1	-624145	NM_000865	3354	Hs.1611	NM_000865	ENSG00000168830	HTR1E	5-HT1E	5-hydroxytryptamine receptor 1E	protein-coding
16.9667	chr11	10498070	10498437	+	0.0666667	NA	intron (NM_001025389, intron 10 of 14)	intron (NM_001025389, intron 10 of 14)	10073	NR_039705	100616263		NR_039705	ENSG00000283813	MIR4485	mir-4485	microRNA 4485	ncRNA
22.9667-10	chr9	18594927	18595501	+	0.0666667	NA	intron (NM_052866, intron 4 of 12)	intron (NM_052866, intron 4 of 12)	21908	NR_036107	100422869		NR_036107	ENSG00000264638	MIR3152	-	microRNA 3152	ncRNA
19.6-19	chr8	126919575	126919903	+	0.0666667	NA	Intergenic	L1ME1|LINE|L1	-93415	NR_045262	100750225	Hs.571530	NR_045262	ENSG00000253438	PCAT1	PCA1|PCAT-1	prostate cancer associated transcript 1	ncRNA
22.2333-4	chr12	128315445	128315819	+	0.0666667	NA	intron (NM_001136103, intron 1 of 8)	MLT1C|LTR|ERVL-MaLR	21540	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA
5.23334-2	chr9	71417373	71417451	+	0.0666667	NA	intron (NM_001366143, intron 1 of 25)	L1ME2|LINE|L1	29559	NM_001366141	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding
11.6-11	chr8	80318859	80319137	+	0.0666667	NA	Intergenic	Intergenic	77609	NR_049894	100847056		NR_049894	ENSG00000265588	MIR5708	-	microRNA 5708	ncRNA
25.4-18	chrX	9434562	9435031	+	0.0666667	NA	Intergenic	AluSp|SINE|Alu	-28499	NM_001139467	6907	Hs.495656	NM_005647	ENSG00000101849	TBL1X	EBI|SMAP55|TBL1	transducin beta like 1 X-linked	protein-coding
26.6667-9	chr7	63988054	63988511	+	0.0666667	NA	Intergenic	Intergenic	-10524	NR_145488	100419780	Hs.742917	NR_145488		ZNF722P	ZNF722	zinc finger protein 722, pseudogene	pseudo
17.2333-12	chr9	37601509	37601926	+	0.0666667	NA	Intergenic	Intergenic	-1512	NM_001371224								
15.2667	chr10	58531742	58532054	+	0.0666667	NA	intron (NM_001080512, intron 1 of 20)	L1M4c|LINE|L1	19026	NM_001080512	80114	Hs.100261	NM_001080512	ENSG00000122870	BICC1	BICC|CYSRD	BicC family RNA binding protein 1	protein-coding
15.6667-2	chr19	50336809	50337221	+	0.0666667	NA	intron (NR_002798, intron 4 of 8)	intron (NR_002798, intron 4 of 8)	-3479	NR_110912	3748	Hs.467146	NM_004977	ENSG00000131398	KCNC3	KSHIIID|KV3.3|SCA13	potassium voltage-gated channel subfamily C member 3	protein-coding
13.5333-15	chr3	179552240	179552592	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-10464	NM_178042	86	Hs.435326	NM_004301	ENSG00000136518	ACTL6A	ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K	actin like 6A	protein-coding
6.36667	chr4	73608156	73608270	+	0.0666667	NA	intron (NM_001270391, intron 2 of 9)	intron (NM_001270391, intron 2 of 9)	12223	NM_177532	166824	Hs.529677	NM_177532	ENSG00000169435	RASSF6	-	Ras association domain family member 6	protein-coding
17.7667-4	chr12	129784265	129784713	+	0.0666667	NA	intron (NM_133448, intron 1 of 8)	intron (NM_133448, intron 1 of 8)	119536	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding
19.9667-13	chr6	132211178	132211657	+	0.0666667	NA	Intergenic	L1ME3D|LINE|L1	77439	NR_146223	100507254	Hs.103070	NR_038981	ENSG00000228495	LINC01013	-	long intergenic non-protein coding RNA 1013	ncRNA
22.8333-3	chr10	11312962	11313304	+	0.0666667	NA	intron (NM_001025076, intron 9 of 13)	L1MEd|LINE|L1	31541	NR_126062	414196	Hs.729598	NM_001012713		CELF2-AS1	C10orf31	CELF2 antisense RNA 1	ncRNA
18.6-9	chr15	69479064	69479582	+	0.0666667	NA	Intergenic	Intergenic	26505	NM_213725	6176	Hs.356502	NM_001003	ENSG00000137818	RPLP1	LP1|P1|RPP1	ribosomal protein lateral stalk subunit P1	protein-coding
23.9333-2	chr1	59861717	59862238	+	0.0666667	NA	intron (NM_015888, intron 15 of 21)	intron (NM_015888, intron 15 of 21)	47028	NM_015888	51361	Hs.378836	NM_015888	ENSG00000134709	HOOK1	HK1	hook microtubule tethering protein 1	protein-coding
19.9	chr10	61617623	61617928	+	0.0666667	NA	Intergenic	MER5A|DNA|hAT-Charlie	-45154	NM_001366907	219621	Hs.673160	NM_173554	ENSG00000183346	CABCOCO1	C10orf107	ciliary associated calcium binding coiled-coil 1	protein-coding
32.3-4	chr4	167515624	167516356	+	0.0666667	NA	Intergenic	Intergenic	-281400	NM_016950	50859	Hs.481133	NM_016950	ENSG00000196104	SPOCK3	HSAJ1454|TES-3|TICN3	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3	protein-coding
5.2-2	chr2	152343547	152343644	+	0.0666667	NA	intron (NM_052905, intron 1 of 25)	OldhAT1|DNA|hAT-Ac	8421	NM_052905	114793	Hs.654630	NM_052905	ENSG00000157827	FMNL2	FHOD2	formin like 2	protein-coding
26.1333-8	chr5	74455989	74456547	+	0.0666667	NA	intron (NR_126354, intron 2 of 2)	intron (NR_126354, intron 2 of 2)	80708	NR_126354	104310351	Hs.582291	NR_126354	ENSG00000248673	LINC01331	-	long intergenic non-protein coding RNA 1331	ncRNA
19.6333	chr1	84945184	84945583	+	0.0666667	NA	intron (NM_153259, intron 7 of 13)	intron (NM_153259, intron 7 of 13)	51730	NM_153259	255231	Hs.591446	NM_153259	ENSG00000153898	MCOLN2	TRP-ML2|TRPML2	mucolipin 2	protein-coding
17.0667-10	chr20	52918632	52918964	+	0.0666667	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-53560	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding
27-10	chr15	66850173	66850772	+	0.0666667	NA	Intergenic	Intergenic	106043	NR_135687	102723481	Hs.512978	NR_135687	ENSG00000259289	LINC02206	-	long intergenic non-protein coding RNA 2206	ncRNA
23.8667-9	chr7	113297536	113298148	+	0.0666667	NA	Intergenic	Intergenic	-179260	NM_001352687	401397	Hs.117929	NM_001352687	ENSG00000214194	SMIM30	LINC00998	small integral membrane protein 30	protein-coding
18.1667-14	chr9	108996238	108996765	+	0.0666667	NA	intron (NM_003798, intron 2 of 18)	intron (NM_003798, intron 2 of 18)	16998	NM_003798	8727	Hs.58488	NM_003798	ENSG00000119326	CTNNAL1	ACRP|CLLP|alpha-CATU	catenin alpha like 1	protein-coding
9.06667	chr10	28262187	28262323	+	0.0666667	NA	intron (NM_173496, intron 2 of 18)	(TA)n|Simple_repeat|Simple_repeat	19868	NM_173496	143098	Hs.499159	NM_173496	ENSG00000150054	MPP7	-	membrane palmitoylated protein 7	protein-coding
8.73333-4	chr4	88253830	88254034	+	0.0666667	NA	Intergenic	Intergenic	-22306	NM_001348985	9429	Hs.480218	NM_004827	ENSG00000118777	ABCG2	ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1	ATP binding cassette subfamily G member 2 (Junior blood group)	protein-coding
21.4667-7	chr2	114350171	114350556	+	0.0666667	NA	Intergenic	MSTD|LTR|ERVL-MaLR	-92278	NM_001321910	57628	Hs.580539	NM_020868	ENSG00000175497	DPP10	DPL2|DPPY|DPRP-3|DPRP3	dipeptidyl peptidase like 10	protein-coding
10.8667-8	chr9	65076427	65076632	+	0.0666667	NA	Intergenic	ALR/Alpha|Satellite|centr	-66529	NR_160670	105379443		NR_160670		LOC105379443	-	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like pseudogene	pseudo
12.9333-9	chr7	10225291	10225562	+	0.0666667	NA	Intergenic	Intergenic	-477250	NR_149037	100131472	Hs.170681	NR_149037		LOC100131472	-	uncharacterized LOC100131472	ncRNA
26.9333-3	chr10	60172991	60173533	+	0.0666667	NA	intron (NM_001204403, intron 19 of 43)	intron (NM_001204403, intron 19 of 43)	-32246	NM_001149	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding
7.06666-3	chr18	75162398	75162570	+	0.0666667	NA	Intergenic	Intergenic	43029	NM_001306093	284273	Hs.465433	NM_175907	ENSG00000180011	ZADH2	PRG-3	zinc binding alcohol dehydrogenase domain containing 2	protein-coding
25.1-10	chr20	1768373	1769009	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	11055	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo
11.1667-3	chr2	65933926	65934157	+	0.0666667	NA	Intergenic	Intergenic	424287	NR_039938	100616464		NR_039938	ENSG00000264525	MIR4778	-	microRNA 4778	ncRNA
15.9-11	chr4	58680978	58681371	+	0.0666667	NA	Intergenic	Intergenic	-144846	NR_133943	105377671	Hs.225045	NR_133943	ENSG00000250340	LINC02494	-	long intergenic non-protein coding RNA 2494	ncRNA
17.9-2	chr10	19319587	19319974	+	0.0666667	NA	intron (NM_001142308, intron 21 of 39)	MLT1A0|LTR|ERVL-MaLR	270979	NM_001142308	340895	Hs.646734	NM_001142308	ENSG00000204740	MALRD1	C10orf112|DIET1|bA265G8.2	MAM and LDL receptor class A domain containing 1	protein-coding
17-6	chr3	169950950	169951426	+	0.0666667	NA	intron (NR_027622, intron 1 of 1)	MLT1K|LTR|ERVL-MaLR	15546	NR_024409	100128164	Hs.633070	NR_024409	ENSG00000239219	LOC100128164	-	four and a half LIM domains 1 pseudogene	pseudo
21.3667-3	chr10	46220819	46221139	+	0.0666667	NA	intron (NR_103828, intron 2 of 2)	MLT1B|LTR|ERVL-MaLR	48629	NR_103827	100996567	Hs.546758	NR_103827		ANTXRLP1	-	ANTXR like pseudogene 1	pseudo
23.4667-11	chr9	99222602	99223058	+	0.0666667	NA	promoter-TSS (NM_033087)	promoter-TSS (NM_033087)	548	NM_006808	10952	Hs.191887	NM_006808	ENSG00000106803	SEC61B	-	SEC61 translocon beta subunit	protein-coding
18.1333-9	chr17	55873446	55873964	+	0.0666667	NA	Intergenic	LTR45C|LTR|ERV1	122600	NM_001102402	58488	Hs.285218	NM_021213	ENSG00000141179	PCTP	PC-TP|STARD2	phosphatidylcholine transfer protein	protein-coding
20.9-7	chr16	49142859	49143407	+	0.0666667	NA	Intergenic	Intergenic	138705	NM_004352	869	Hs.458423	NM_004352	ENSG00000102924	CBLN1	-	cerebellin 1 precursor	protein-coding
19.5667-2	chr1	239830130	239830446	+	0.0666667	NA	intron (NM_001347716, intron 7 of 7)	intron (NM_001347716, intron 7 of 7)	69584	NR_046582	100873984	Hs.199475	NR_046582	ENSG00000234601	CHRM3-AS1	-	CHRM3 antisense RNA 1	ncRNA
6.8	chr4	134060446	134060605	+	0.0666667	NA	Intergenic	L1M1|LINE|L1	141264	NM_001114734	132430	Hs.49889	NM_001114734	ENSG00000254535	PABPC4L	-	poly(A) binding protein cytoplasmic 4 like	protein-coding
21.5333-4	chr18	4773713	4774203	+	0.0666667	NA	Intergenic	MER39|LTR|ERV1	-307224	NR_146900	105371969	Hs.599709	NR_146900		LINC01892	-	long intergenic non-protein coding RNA 1892	ncRNA
14.0667	chr12	72584650	72585035	+	0.0666667	NA	intron (NM_013381, intron 12 of 18)	L1MA8|LINE|L1	-311333	NR_026836	283392	Hs.363603	NM_001025457	ENSG00000236333	TRHDE-AS1	-	TRHDE antisense RNA 1	ncRNA
15.7667-12	chr6	46199036	46199275	+	0.0666667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-28145	NM_021572	59084	Hs.35198	NM_021572	ENSG00000112796	ENPP5	NPP-5|NPP5	ectonucleotide pyrophosphatase/phosphodiesterase family member 5	protein-coding
30.1333-7	chr22	45678351	45679115	+	0.0666667	NA	intron (NM_001167621, intron 1 of 10)	intron (NM_001167621, intron 1 of 10)	6899	NM_013236	25814	Hs.475125	NM_013236	ENSG00000130638	ATXN10	E46L|HUMEEP|SCA10	ataxin 10	protein-coding
17.6667-11	chr9	133513593	133513926	+	0.0666667	NA	TTS (NM_001080483)	TTS (NM_001080483)	11200	NM_001080483	389827		NM_001080483	ENSG00000187616	MYMK	MYOMAKER|TMEM226|TMEM8C	myomaker, myoblast fusion factor	protein-coding
15.7667-11	chr3	188428572	188429000	+	0.0666667	NA	intron (NM_001167672, intron 2 of 9)	L3|LINE|CR1	139880	NR_046623	100873917	Hs.674993	NR_046623	ENSG00000224563	LPP-AS1	-	LPP antisense RNA 1	ncRNA
18.6333-6	chr11	77719006	77719561	+	0.0666667	NA	intron (NM_016578, intron 5 of 15)	Charlie8|DNA|hAT-Charlie	-81477	NM_001311199	1207	Hs.430733	NM_001293	ENSG00000074201	CLNS1A	CLCI|CLNS1B|ICln	chloride nucleotide-sensitive channel 1A	protein-coding
23.3333-2	chr10	131147152	131147712	+	0.0666667	NA	intron (NM_174937, intron 6 of 11)	intron (NM_174937, intron 6 of 11)	52214	NR_120623	101927489	Hs.659317	NR_120623	ENSG00000230098	TCERG1L-AS1	-	TCERG1L antisense RNA 1	ncRNA
4.53334	chr15	55549261	55549333	+	0.0666667	NA	intron (NM_015617, intron 1 of 2)	L1ME4b|LINE|L1	39048	NM_001330326	26108	Hs.87194	NM_015617	ENSG00000171016	PYGO1	-	pygopus family PHD finger 1	protein-coding
23.4333-8	chr3	12882382	12882941	+	0.0666667	NA	intron (NR_136189, intron 1 of 2)	intron (NR_136189, intron 1 of 2)	2550	NR_136189	105376955	Hs.561179	NR_136189	ENSG00000232746	LINC02022	-	long intergenic non-protein coding RNA 2022	ncRNA
14.1333-5	chr14	23718154	23718494	+	0.0666667	NA	Intergenic	Intergenic	81960	NM_005794	10202	Hs.272499	NM_005794	ENSG00000100867	DHRS2	HEP27|SDR25C1	dehydrogenase/reductase 2	protein-coding
18.7333-4	chr10	114402285	114402612	+	0.0666667	NA	intron (NM_001351068, intron 1 of 19)	intron (NM_001351068, intron 1 of 19)	2054	NM_001001936	84632	Hs.501106	NM_032550	ENSG00000169129	AFAP1L2	CTB-1144G6.4|KIAA1914|XB130	actin filament associated protein 1 like 2	protein-coding
17.4333-6	chr21	20077537	20077895	+	0.0666667	NA	Intergenic	L1PA2|LINE|L1	-177961	NR_146910	105372746	Hs.580899	NR_146910	ENSG00000233480	LINC01683	C21orf40	long intergenic non-protein coding RNA 1683	ncRNA
10.6	chr10	63687136	63687369	+	0.0666667	NA	Intergenic	MER39|LTR|ERV1	-165362	NM_001322258	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding
15.7-10	chr5	173379946	173380301	+	0.0666667	NA	Intergenic	Intergenic	32668	NR_107023	102465862		NR_107023	ENSG00000274994	MIR8056	hsa-mir-8056	microRNA 8056	ncRNA
25.3333-12	chr4	116708720	116709302	+	0.0666667	NA	Intergenic	L2b|LINE|L2	376565	NM_152402	133022	Hs.570737	NM_152402	ENSG00000174599	TRAM1L1	-	translocation associated membrane protein 1 like 1	protein-coding
14.0333-3	chr11	90799742	90800141	+	0.0666667	NA	intron (NR_104190, intron 3 of 6)	intron (NR_104190, intron 3 of 6)	69261	NR_031663	100302228		NR_031663	ENSG00000221586	MIR1261	MIRN1261|hsa-mir-1261	microRNA 1261	ncRNA
16.5333-3	chr12	105769510	105769826	+	0.0666667	NA	Intergenic	MLT1J1|LTR|ERVL-MaLR	62894	NR_110110	101929110	Hs.145944	NR_110108	ENSG00000257859	CASC18	-	cancer susceptibility 18	ncRNA
17.1667-8	chr18	50993658	50994026	+	0.0666667	NA	Intergenic	LTR85a|LTR|Gypsy?	25802	NM_018696	55520	Hs.657360	NM_018696	ENSG00000141642	ELAC1	D29	elaC ribonuclease Z 1	protein-coding
38.4667-4	chr7	126390563	126391196	+	0.0666667	NA	Intergenic	L2|LINE|L2	667305	NR_030323	693177		NR_030323	ENSG00000207692	MIR592	MIRN592|hsa-mir-592|mir-592	microRNA 592	ncRNA
21.1	chr17	58449147	58449614	+	0.0666667	NA	intron (NM_001080439, intron 5 of 5)	L1MA3|LINE|L1	-31798	NM_017763	54894	Hs.584916	NM_017763	ENSG00000108375	RNF43	RNF124|SSPCS|URCC	ring finger protein 43	protein-coding
13.3667-10	chr3	131765619	131765943	+	0.0666667	NA	intron (NM_130808, intron 2 of 15)	intron (NM_130808, intron 2 of 15)	220150	NR_049890	100847040		NR_049890	ENSG00000265859	MIR5704	-	microRNA 5704	ncRNA
24.3-16	chr6	86008902	86009398	+	0.0666667	NA	Intergenic	L1MC4|LINE|L1	-330417	NR_003038	387066	Hs.292457	NR_003038	ENSG00000203875	SNHG5	C6orf160|LINC00044|NCRNA00044|U50HG	small nucleolar RNA host gene 5	ncRNA
12.9-4	chr2	100120976	100121340	+	0.0666667	NA	intron (NM_002285, intron 1 of 23)	LTR1D1|LTR|ERV1	-15575	NM_001025108	3899	Hs.444414	NM_002285	ENSG00000144218	AFF3	LAF4|MLLT2-like	AF4/FMR2 family member 3	protein-coding
6.93333	chr10	58119653	58119814	+	0.0666667	NA	Intergenic	L1ME2z|LINE|L1	148161	NM_152230	253430	Hs.30280	NM_152230	ENSG00000151151	IPMK	-	inositol polyphosphate multikinase	protein-coding
13.3	chr11	26782271	26782506	+	0.0666667	NA	Intergenic	L1MA8|LINE|L1	-60328	NM_178498	159963	Hs.148907	NM_178498	ENSG00000148942	SLC5A12	SMCT2	solute carrier family 5 member 12	protein-coding
25.3-13	chr5	16308229	16308973	+	0.0666667	NA	Intergenic	Intergenic	128360	NR_149044	401176	Hs.369777	NR_149044		LOC401176	-	uncharacterized LOC401176	ncRNA
9.99999	chr11	74172551	74172818	+	0.0666667	NA	intron (NM_001271593, intron 1 of 13)	intron (NM_001271593, intron 1 of 13)	1395	NM_016147	51400	Hs.503251	NM_016147	ENSG00000214517	PPME1	ABDH19|PME-1	protein phosphatase methylesterase 1	protein-coding
12.4333-7	chr21	45114406	45114750	+	0.0666667	NA	intron (NM_001346688, intron 1 of 11)	intron (NM_001346688, intron 1 of 11)	-37952	NM_001346687	104	Hs.474018	NM_001112	ENSG00000197381	ADARB1	ADAR2|DRABA2|DRADA2|RED1	adenosine deaminase RNA specific B1	protein-coding
3.3	chr10	116405329	116405378	+	0.0666667	NA	Intergenic	L1M5|LINE|L1	-22494	NM_001011709	119548	Hs.276724	NM_001011709	ENSG00000203837	PNLIPRP3	-	pancreatic lipase related protein 3	protein-coding
9.4-5	chr3	96774534	96774716	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-39969	NM_001080448	285220	Hs.272208	NM_173655	ENSG00000080224	EPHA6	EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066	EPH receptor A6	protein-coding
21.7-15	chr5	148453871	148454357	+	0.0666667	NA	intron (NM_001040169, intron 5 of 5)	MIRb|SINE|MIR	70156	NM_030793	81545	Hs.483772	NM_030793	ENSG00000145868	FBXO38	Fbx38|HMN2D|MOKA|SP329	F-box protein 38	protein-coding
20.0667-17	chr7	51252904	51253256	+	0.0666667	NA	intron (NM_015198, intron 1 of 12)	AluSx1|SINE|Alu	63729	NM_001287438	23242	Hs.99141	NM_015198	ENSG00000106078	COBL	-	cordon-bleu WH2 repeat protein	protein-coding
17.7-9	chr22	19441095	19441597	+	0.0666667	NA	3' UTR (NM_001166242, exon 3 of 3)	3' UTR (NM_001166242, exon 3 of 3)	6886	NM_001166242	128977	Hs.659565	NM_173793	ENSG00000242259	C22orf39	-	chromosome 22 open reading frame 39	protein-coding
8.5-4	chr20	37118006	37118217	+	0.0666667	NA	intron (NM_152503, intron 18 of 24)	intron (NM_152503, intron 18 of 24)	-22114	NM_001323282	5933	Hs.207745	NM_002895	ENSG00000080839	RBL1	CP107|PRB1|p107	RB transcriptional corepressor like 1	protein-coding
11.5333	chr1	39398928	39399209	+	0.0666667	NA	intron (NM_012090, intron 52 of 92)	intron (NM_012090, intron 52 of 92)	-10005	NM_015038	643314	Hs.658760	NM_015038	ENSG00000127603	KIAA0754	-	KIAA0754	protein-coding
13.0667	chr1	4568450	4568709	+	0.0666667	NA	Intergenic	Intergenic	-2908	NR_147025	105376679		NR_147025	ENSG00000232596	LINC01646	-	long intergenic non-protein coding RNA 1646	ncRNA
16.3-8	chr20	45864698	45864948	+	0.0666667	NA	intron (NM_080752, intron 1 of 1)	AluSx1|SINE|Alu	7209	NM_080752	140831	Hs.292135	NM_080752	ENSG00000132801	ZSWIM3	C20orf164|PPP1R174	zinc finger SWIM-type containing 3	protein-coding
17.3-2	chr12	79849812	79850234	+	0.0666667	NA	intron (NM_001244990, intron 3 of 24)	AluJr4|SINE|Alu	63888	NM_001143886	4659	Hs.49582	NM_002480	ENSG00000058272	PPP1R12A	M130|MBS|MYPT1	protein phosphatase 1 regulatory subunit 12A	protein-coding
16.0667-3	chr11	16106418	16106679	+	0.0666667	NA	intron (NM_033326, intron 7 of 15)	L1MB4|LINE|L1	-136927	NR_106721	102464826		NR_106721	ENSG00000284094	MIR6073	hsa-mir-6073	microRNA 6073	ncRNA
16.0333-6	chr2	23657405	23657794	+	0.0666667	NA	intron (NM_052920, intron 5 of 13)	intron (NM_052920, intron 5 of 13)	269524	NM_001242338	54454	Hs.467862	NM_017552	ENSG00000119778	ATAD2B	-	ATPase family AAA domain containing 2B	protein-coding
13.3333-8	chr15	39898408	39898741	+	0.0666667	NA	intron (NM_001271854, intron 1 of 3)	L2c|LINE|L2	22318	NM_007223	11245	Hs.37196	NM_007223	ENSG00000166073	GPR176	HB-954	G protein-coupled receptor 176	protein-coding
14.9667-5	chr2	74979105	74979538	+	0.0666667	NA	Intergenic	HAL1b|LINE|L1	20678	NM_019896	56655	Hs.469060	NM_019896	ENSG00000115350	POLE4	YHHQ1|p12	DNA polymerase epsilon 4, accessory subunit	protein-coding
19.3-4	chr11	131100808	131101251	+	0.0666667	NA	Intergenic	Intergenic	-184542	NM_001347921	399979	Hs.444024	NM_014758	ENSG00000120451	SNX19	CHET8	sorting nexin 19	protein-coding
17.4-12	chr9	68646871	68647360	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-58125	NM_003558	8395	Hs.534371	NM_003558	ENSG00000107242	PIP5K1B	MSS4|STM7	phosphatidylinositol-4-phosphate 5-kinase type 1 beta	protein-coding
10.9667	chr18	48995089	48995358	+	0.0666667	NA	Intergenic	Intergenic	-28480	NR_148999	100129878	Hs.437704	NR_148999	ENSG00000264269	LOC100129878	-	uncharacterized LOC100129878	ncRNA
27.5667-7	chr9	115219369	115220075	+	0.0666667	NA	intron (NR_163556, intron 1 of 7)	intron (NR_163556, intron 1 of 7)	77904	NR_163556	50514	Hs.148841	NM_017418	ENSG00000173077	DEC1	CTS9	deleted in esophageal cancer 1	ncRNA
15.4667-20	chr8	86434716	86435142	+	0.0666667	NA	intron (NM_007013, intron 14 of 24)	intron (NM_007013, intron 14 of 24)	73757	NM_016033	51115	Hs.145386	NM_016033	ENSG00000176623	RMDN1	CGI-90|FAM82B|RMD-1|RMD1	regulator of microtubule dynamics 1	protein-coding
16.3333	chr10	79626397	79626820	+	0.0666667	NA	Intergenic	Intergenic	15669	NM_001093770	653509	Hs.535295	NM_005411	ENSG00000122852	SFTPA1	COLEC4|PSAP|PSP-A|PSPA|SFTP1|SFTPA1B|SP-A|SP-A1|SPA|SPA1	surfactant protein A1	protein-coding
22.0667-11	chr7	89848963	89849442	+	0.0666667	NA	Intergenic	L1ME3D|LINE|L1	-270198	NR_003551	442523	Hs.406964	NR_003551	ENSG00000235436	DPY19L2P4	-	DPY19L2 pseudogene 4	pseudo
14.5333-8	chr2	235917703	235917987	+	0.0666667	NA	intron (NM_014914, intron 11 of 16)	intron (NM_014914, intron 11 of 16)	250541	NM_001301687	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding
10.9333-9	chr3	159263087	159263310	+	0.0666667	NA	3' UTR (NM_001042706, exon 4 of 4)	3' UTR (NM_001042706, exon 4 of 4)	-10049	NM_001197108	29970	Hs.134665	NM_014575	ENSG00000151967	SCHIP1	SCHIP-1	schwannomin interacting protein 1	protein-coding
18.0333-8	chr7	128833835	128834175	+	0.0666667	NA	intron (NM_001127487, intron 1 of 46)	intron (NM_001127487, intron 1 of 46)	3576	NM_001458	2318	Hs.58414	NM_001458	ENSG00000128591	FLNC	ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5	filamin C	protein-coding
15.4333-2	chr11	103101857	103102088	+	0.0666667	NA	Intergenic	MLT1I|LTR|ERVL-MaLR	-7454	NM_001377	79659	Hs.503721	NM_001377	ENSG00000187240	DYNC2H1	ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11	dynein cytoplasmic 2 heavy chain 1	protein-coding
11.7667-2	chr1	106796270	106796536	+	0.0666667	NA	Intergenic	Intergenic	-21836	NR_147165	105378889	Hs.568674	NR_147165	ENSG00000237460	LINC01661	-	long intergenic non-protein coding RNA 1661	ncRNA
15.0333-7	chr14	102196360	102196725	+	0.0666667	NA	intron (NM_001353661, intron 3 of 3)	intron (NM_001353661, intron 3 of 3)	38884	NM_001353832	5891	Hs.36859	NM_014226	ENSG00000080823	MOK	RAGE|RAGE-1|RAGE1|STK30	MOK protein kinase	protein-coding
14.9667	chr11	39230582	39230903	+	0.0666667	NA	Intergenic	Intergenic	581884	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
30.9-4	chr12	39920702	39921392	+	0.0666667	NA	intron (NM_052885, intron 4 of 9)	intron (NM_052885, intron 4 of 9)	185034	NM_052885	114134	Hs.558595	NM_052885	ENSG00000151229	SLC2A13	HMIT	solute carrier family 2 member 13	protein-coding
28.1667-5	chr7	19817616	19818186	+	0.0666667	NA	Intergenic	L1MA4|LINE|L1	-44284	NM_001366628	256130	Hs.487670	NM_152774	ENSG00000173452	TMEM196	-	transmembrane protein 196	protein-coding
6.56667	chr12	27706752	27706865	+	0.0666667	NA	Intergenic	Intergenic	-3965	NM_001190864	60488	Hs.714076	NM_021821	ENSG00000061794	MRPS35	HDCMD11P|MDS023|MRP-S28|MRPS28	mitochondrial ribosomal protein S35	protein-coding
20.0333-19	chrX	155210182	155210692	+	0.0666667	NA	intron (NM_001303544, intron 2 of 6)	AluJr|SINE|Alu	-5836	NM_001303543	7411	Hs.436803	NM_003372	ENSG00000155959	VBP1	HIBBJ46|PFD3|PFDN3|VBP-1	VHL binding protein 1	protein-coding
28.0333-8	chr6	129359533	129359978	+	0.0666667	NA	intron (NM_000426, intron 32 of 64)	intron (NM_000426, intron 32 of 64)	350422	NM_033515	93663	Hs.486458	NM_033515	ENSG00000146376	ARHGAP18	MacGAP|SENEX|bA307O14.2	Rho GTPase activating protein 18	protein-coding
27.4-12	chr2	231347182	231347950	+	0.0666667	NA	intron (NM_001352754, intron 21 of 24)	intron (NM_001352754, intron 21 of 24)	-15142	NR_039937	100616317		NR_039937	ENSG00000263641	MIR4777	-	microRNA 4777	ncRNA
21.0333-14	chr6	3161505	3162059	+	0.0666667	NA	Intergenic	Intergenic	-4238	NM_001069	7280	Hs.654543	NM_001069	ENSG00000137267	TUBB2A	CDCBM5|TUBB|TUBB2	tubulin beta 2A class IIa	protein-coding
23.6667-6	chr22	30267104	30267663	+	0.0666667	NA	promoter-TSS (NM_020530)	promoter-TSS (NM_020530)	-532	NM_020530	5008	Hs.248156	NM_020530	ENSG00000099985	OSM	-	oncostatin M	protein-coding
17.5333-14	chr4	145392389	145392825	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-52188	NR_147156	105377466	Hs.405641	NR_147156	ENSG00000272727	LINC02266	-	long intergenic non-protein coding RNA 2266	ncRNA
21.7667-7	chr3	100795328	100795911	+	0.0666667	NA	intron (NM_001349332, intron 21 of 35)	intron (NM_001349332, intron 21 of 35)	86077	NM_001195478	10342	Hs.518123	NM_006070	ENSG00000114354	TFG	HMSNP|SPG57|TF6|TRKT3	trafficking from ER to golgi regulator	protein-coding
24.1667-4	chr12	42634988	42635449	+	0.0666667	NA	intron (NR_110042, intron 3 of 5)	intron (NR_110042, intron 3 of 5)	11280	NR_110042	101927058	Hs.434238	NR_110042	ENSG00000257510	LINC02402	-	long intergenic non-protein coding RNA 2402	ncRNA
9.66667-4	chr8	71156342	71156527	+	0.0666667	NA	Intergenic	Intergenic	200272	NM_172058	2138	Hs.444971	NM_000503	ENSG00000104313	EYA1	BOP|BOR|BOS1|OFC1	EYA transcriptional coactivator and phosphatase 1	protein-coding
20.6-4	chr16	60133228	60133710	+	0.0666667	NA	Intergenic	L2a|LINE|L2	226324	NM_001282301	729159		NM_001282301		NPAP1L	-	nuclear pore associated protein 1 like	protein-coding
12.6333-5	chr3	47487149	47487400	+	0.0666667	NA	Intergenic	LTR47B3|LTR|ERVL	-11333	NM_001320044	22937	Hs.531789	NM_012235	ENSG00000114650	SCAP	-	SREBF chaperone	protein-coding
6.66667	chr1	65761039	65761139	+	0.0666667	NA	Intergenic	7SLRNA|srpRNA|srpRNA	-31421	NM_001297440	5142	Hs.198072	NM_002600	ENSG00000184588	PDE4B	DPDE4|PDEIVB	phosphodiesterase 4B	protein-coding
24.8667-2	chr13	61741523	61742012	+	0.0666667	NA	Intergenic	L2c|LINE|L2	287781	NR_046995	100874143	Hs.552684	NR_046995	ENSG00000229578	LINC00358	-	long intergenic non-protein coding RNA 358	ncRNA
26.4-11	chr8	136292795	136293222	+	0.0666667	NA	Intergenic	Intergenic	-237790	NR_147196	107986980	Hs.549694	NR_147196	ENSG00000254101	LINC02055	-	long intergenic non-protein coding RNA 2055	ncRNA
11.0333-8	chrX	80995663	80995965	+	0.0666667	NA	Intergenic	L1MA2|LINE|L1	-185937	NM_153252	254065	Hs.147027	NM_153252	ENSG00000165288	BRWD3	BRODL|MRX93	bromodomain and WD repeat domain containing 3	protein-coding
10.4333	chr1	245226362	245226655	+	0.0666667	NA	intron (NR_151721, intron 1 of 4)	AluSp|SINE|Alu	8009	NR_151721	111216275	Hs.663694	NR_151721	ENSG00000232192	KIF26B-AS1	-	KIF26B antisense RNA 1	ncRNA
24.5667-11	chr5	22676893	22677468	+	0.0666667	NA	intron (NM_004061, intron 1 of 14)	intron (NM_004061, intron 1 of 14)	176164	NM_001364106	1010	Hs.113684	NM_004061	ENSG00000154162	CDH12	CDHB	cadherin 12	protein-coding
21.6-13	chr4	46536863	46537504	+	0.0666667	NA	Intergenic	Intergenic	-147055	NM_000807	2555	Hs.48372	NM_000807	ENSG00000151834	GABRA2	-	gamma-aminobutyric acid type A receptor alpha2 subunit	protein-coding
14.3-15	chr7	51972372	51972661	+	0.0666667	NA	Intergenic	Intergenic	-579260	NR_157843	107986794		NR_157843		LOC107986794	-	uncharacterized LOC107986794	ncRNA
12.8333-11	chr8	87694331	87694699	+	0.0666667	NA	Intergenic	Intergenic	179500	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
26.1333-5	chr2	122625079	122625541	+	0.0666667	NA	Intergenic	MER5B|DNA|hAT-Charlie	448171	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
12.5-2	chr12	13452858	13453093	+	0.0666667	NA	Intergenic	Intergenic	-76230	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA
22.8-7	chr14	20868651	20869050	+	0.0666667	NA	Intergenic	Intergenic	-22553	NM_002935	6037	Hs.73839	NM_002935	ENSG00000169397	RNASE3	ECP|RAF1|RNS3	ribonuclease A family member 3	protein-coding
8.5-3	chr19	3148727	3148854	+	0.0666667	NA	non-coding (NR_110670, exon 2 of 4)	non-coding (NR_110670, exon 2 of 4)	6385	NR_110670	100996351		NR_110670	ENSG00000267551	LOC100996351	-	uncharacterized LOC100996351	ncRNA
7.36666	chr7	22613969	22614151	+	0.0666667	NA	Intergenic	L2b|LINE|L2	50723	NR_038393	100506178	Hs.668122	NR_038393	ENSG00000232759	LOC100506178	-	uncharacterized LOC100506178	ncRNA
24.2333-6	chr20	50233220	50233937	+	0.0666667	NA	Intergenic	Intergenic	-33908	NM_001278655	100506115	Hs.235484	NM_001278655		SMIM25	GCRL1|LINC01272	small integral membrane protein 25	protein-coding
15.8333-12	chr4	46452631	46453031	+	0.0666667	NA	Intergenic	Intergenic	-62703	NM_000807	2555	Hs.48372	NM_000807	ENSG00000151834	GABRA2	-	gamma-aminobutyric acid type A receptor alpha2 subunit	protein-coding
12.7667	chr17	56947176	56947554	+	0.0666667	NA	intron (NM_004645, intron 4 of 6)	intron (NM_004645, intron 4 of 6)	13685	NM_004645	8161	Hs.532795	NM_004645	ENSG00000121058	COIL	CLN80|p80-coilin	coilin	protein-coding
39.1-2	chr14	72390516	72391257	+	0.0666667	NA	intron (NM_001370288, intron 3 of 16)	intron (NM_001370288, intron 3 of 16)	-125934	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA
4.93333-2	chr3	8955295	8955432	+	0.0666667	NA	intron (NM_020165, intron 2 of 12)	L1M3d|LINE|L1	8109	NM_020165	56852	Hs.375684	NM_020165	ENSG00000070950	RAD18	RNF73	RAD18 E3 ubiquitin protein ligase	protein-coding
10.4-4	chr12	27828224	27828435	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	48096	NM_020782	57542	Hs.505104	NM_020782	ENSG00000087448	KLHL42	Ctb9|KLHDC5	kelch like family member 42	protein-coding
12.6667-7	chr7	139587172	139587497	+	0.0666667	NA	intron (NM_001113239, intron 12 of 14)	AluSx1|SINE|Alu	63649	NM_001353368	154790	Hs.57806	NM_001080511	ENSG00000236279	CLEC2L	-	C-type lectin domain family 2 member L	protein-coding
24.6667-11	chr6	54988042	54988576	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-118151	NM_001526	3062	Hs.151624	NM_001526	ENSG00000137252	HCRTR2	OX2R	hypocretin receptor 2	protein-coding
2.3	chr6	87543696	87543730	+	0.0666667	NA	intron (NR_146754, intron 5 of 18)	intron (NR_146754, intron 5 of 18)	46274	NM_020320	57038	Hs.485910	NM_020320	ENSG00000146282	RARS2	ArgRS|DALRD2|PCH6|PRO1992|RARSL	arginyl-tRNA synthetase 2, mitochondrial	protein-coding
22.2-2	chr11	56094592	56095237	+	0.0666667	NA	TTS (NM_001003750)	TTS (NM_001003750)	1606	NM_001003750	120586	Hs.554524	NM_001003750	ENSG00000172154	OR8I2	OR11-170	olfactory receptor family 8 subfamily I member 2	protein-coding
10.9333-2	chr1	155811048	155811262	+	0.0666667	NA	intron (NM_032292, intron 10 of 20)	AluY|SINE|Alu	-27323	NR_132767	106633816		NR_132767		SCARNA26B	-	small Cajal body-specific RNA 26B	ncRNA
14.6333-12	chr4	63627923	63628340	+	0.0666667	NA	Intergenic	THE1A-int|LTR|ERVL-MaLR	781319	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
18.2333-4	chr13	23988473	23988833	+	0.0666667	NA	intron (NR_104595, intron 2 of 4)	L1ME4b|LINE|L1	8851	NR_104595	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding
19.2333-12	chr5	44336931	44337452	+	0.0666667	NA	intron (NM_004465, intron 1 of 2)	L1M2|LINE|L1	-51541	NR_108034	101927075	Hs.617390	NR_108034	ENSG00000248464	FGF10-AS1	-	FGF10 antisense RNA 1	ncRNA
8.96667-3	chr9	129507742	129507876	+	0.0666667	NA	intron (NR_038955, intron 4 of 4)	MIR3|SINE|MIR	19149	NR_038955	100506190	Hs.529860	NR_038955		LINC00963	MetaLnc9	long intergenic non-protein coding RNA 963	ncRNA
11.2333-3	chr12	62795626	62795814	+	0.0666667	NA	intron (NM_020700, intron 3 of 9)	AluYc|SINE|Alu	139430	NM_020700	57460	Hs.435479	NM_020700	ENSG00000111110	PPM1H	ARHCL1|NERPP-2C|URCC2	protein phosphatase, Mg2+/Mn2+ dependent 1H	protein-coding
22.0333	chr1	115949989	115950517	+	0.0666667	NA	intron (NR_125970, intron 2 of 4)	intron (NR_125970, intron 2 of 4)	-26260	NM_018420	55356	Hs.125482	NM_018420	ENSG00000163393	SLC22A15	FLIPT1|PRO34686	solute carrier family 22 member 15	protein-coding
16.4667-3	chr11	39440440	39440865	+	0.0666667	NA	Intergenic	Intergenic	791794	NR_120553	101928536	Hs.144776	NR_120553	ENSG00000254562	LINC01493	-	long intergenic non-protein coding RNA 1493	ncRNA
26.0333-9	chr5	150500683	150501370	+	0.0666667	NA	intron (NM_001301063, intron 1 of 13)	intron (NM_001301063, intron 1 of 13)	3247	NM_001301063	3340	Hs.222055	NM_001543	ENSG00000070614	NDST1	HSST|MRT46|NST1	N-deacetylase and N-sulfotransferase 1	protein-coding
17.5-5	chr15	52183804	52184241	+	0.0666667	NA	intron (NR_102751, intron 2 of 2)	intron (NR_102751, intron 2 of 2)	3996	NR_102751	100129973	Hs.569494	NR_102751		CERNA1	-	competing endogenous lncRNA 1 for miR-4707-5p and miR-4767	ncRNA
20.3333	chr1	23743128	23743476	+	0.0666667	NA	promoter-TSS (NM_003198)	promoter-TSS (NM_003198)	-64	NM_003198	6924	Hs.15535	NM_003198	ENSG00000011007	ELOA	SIII|SIII p110|TCEB3|TCEB3A	elongin A	protein-coding
32-9	chr6	80759149	80759698	+	0.0666667	NA	Intergenic	L1M1|LINE|L1	652752	NM_183050	594	Hs.156414	NM_000056	ENSG00000083123	BCKDHB	BCKDE1B|BCKDH E1-beta|E1B	branched chain keto acid dehydrogenase E1 subunit beta	protein-coding
10.2-2	chr18	63112634	63112903	+	0.0666667	NA	Intergenic	MER89|LTR|ERV1	206612	NM_000633	596	Hs.150749	NM_000633	ENSG00000171791	BCL2	Bcl-2|PPP1R50	BCL2 apoptosis regulator	protein-coding
20.2333-4	chr1	188488703	188489081	+	0.0666667	NA	Intergenic	Tigger2|DNA|TcMar-Tigger	1045264	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
25.7333-8	chr3	2575008	2575600	+	0.0666667	NA	intron (NM_175607, intron 4 of 24)	AluSz6|SINE|Alu	-316911	NM_175613	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding
23.9333-6	chr2	210712769	210713212	+	0.0666667	NA	Intergenic	L1M4b|LINE|L1	95419	NR_002763	29034	Hs.658398	NR_002763	ENSG00000280837	CPS1-IT1	CPS1-IT|CPS1IT|CPS1IT1|PRO0132	CPS1 intronic transcript 1	ncRNA
14.3667-3	chr14	66339965	66340239	+	0.0666667	NA	Intergenic	L1MEg|LINE|L1	-146269	NR_024338	440184	Hs.412138	NM_001004331	ENSG00000196553	CCDC196	C14orf53|LINC00238|NCRNA00238	coiled-coil domain containing 196	protein-coding
10.2	chr1	70392570	70392758	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-18554	NM_153742	1491	Hs.19904	NM_001902	ENSG00000116761	CTH	-	cystathionine gamma-lyase	protein-coding
26.0667-4	chr5	132728287	132728841	+	0.0666667	NA	intron (NM_007054, intron 2 of 16)	AluSz|SINE|Alu	8982	NM_007054	11127	Hs.43670	NM_007054	ENSG00000131437	KIF3A	FLA10|KLP-20	kinesin family member 3A	protein-coding
26.8333-8	chr8	113743111	113743706	+	0.0666667	NA	Intergenic	Intergenic	-306469	NM_001363185	114788	Hs.91381	NM_052900	ENSG00000164796	CSMD3	-	CUB and Sushi multiple domains 3	protein-coding
17.8333-5	chr2	34889578	34890087	+	0.0666667	NA	Intergenic	THE1B|LTR|ERVL-MaLR	212275	NR_126404	104355288	Hs.624529	NR_126404	ENSG00000228262	LINC01320	-	long intergenic non-protein coding RNA 1320	ncRNA
26.4333-10	chr20	35293704	35294291	+	0.0666667	NA	Intergenic	Intergenic	-1572	NM_178468	128876	Hs.592149	NM_178468	ENSG00000125998	FAM83C	C20orf128|dJ614O4.7	family with sequence similarity 83 member C	protein-coding
31.5333-2	chr14	67709722	67710604	+	0.0666667	NA	intron (NM_152443, intron 1 of 8)	MER4A1|LTR|ERV1	8277	NM_152443	145226	Hs.415322	NM_152443	ENSG00000139988	RDH12	LCA13|RP53|SDR7C2	retinol dehydrogenase 12	protein-coding
21.6333-2	chr1	217728841	217729410	+	0.0666667	NA	intron (NM_138796, intron 5 of 10)	intron (NM_138796, intron 5 of 10)	55995	NR_125784	103752555	Hs.602803	NR_125784	ENSG00000234070	SPATA17-AS1	-	SPATA17 antisense RNA 1	ncRNA
15.0667-14	chr6	66967698	66968024	+	0.0666667	NA	Intergenic	L1MB3|LINE|L1	-1087490	NR_125869	102723883	Hs.566528	NR_125869	ENSG00000223504	LOC102723883	-	uncharacterized LOC102723883	ncRNA
26.3667-4	chr2	107690560	107691024	+	0.0666667	NA	Intergenic	L2a|LINE|L2	-63320	NR_126370	104326057	Hs.585967	NR_126369	ENSG00000232991	GACAT1	LINC00876	gastric cancer associated transcript 1	ncRNA
7.73333	chr17	21973025	21973184	+	0.0666667	NA	Intergenic	(ATGGA)n|Simple_repeat|Simple_repeat	-229891	NR_144546	23666	Hs.499916	NR_144546	ENSG00000263563	UBBP4	-	ubiquitin B pseudogene 4	pseudo
11.8333-11	chr8	135658449	135658682	+	0.0666667	NA	Intergenic	L2a|LINE|L2	201109	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	KH RNA binding domain containing, signal transduction associated 3	protein-coding
18.8-9	chr2	157898416	157898699	+	0.0666667	NA	Intergenic	Intergenic	-22227	NM_001111067	90	Hs.470316	NM_001105	ENSG00000115170	ACVR1	ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI	activin A receptor type 1	protein-coding
14.8-13	chr5	97287194	97287568	+	0.0666667	NA	Intergenic	Intergenic	-104134	NM_018343	55781	Hs.27021	NM_018343	ENSG00000058729	RIOK2	RIO2	RIO kinase 2	protein-coding
23.9333-14	chr6	90361915	90362388	+	0.0666667	NA	Intergenic	AluSg7|SINE|Alu	49409	NR_039671	100616109		NR_039671	ENSG00000266760	MIR4464	mir-4464	microRNA 4464	ncRNA
14.3667-4	chr16	12570180	12570573	+	0.0666667	NA	3' UTR (NM_032167, exon 21 of 21)	3' UTR (NM_032167, exon 21 of 21)	-149945	NR_039869	100616195		NR_039869	ENSG00000264733	MIR4718	-	microRNA 4718	ncRNA
15.5-9	chr3	127494363	127494779	+	0.0666667	NA	Intergenic	MSTB-int|LTR|ERVL-MaLR	43209	NR_125397	101927149	Hs.407798	NR_125397	ENSG00000239921	LINC01471	-	long intergenic non-protein coding RNA 1471	ncRNA
11.6667-7	chr3	40771085	40771306	+	0.0666667	NA	Intergenic	Intergenic	246235	NM_001098414	285268	Hs.19977	NM_198484	ENSG00000172888	ZNF621	-	zinc finger protein 621	protein-coding
7.06667	chr20	57962201	57962308	+	0.0666667	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-41650	NR_147083	105376992	Hs.736662	NR_147083	ENSG00000275852	LINC01742	-	long intergenic non-protein coding RNA 1742	ncRNA
16.2333-5	chr7	105603595	105603871	+	0.0666667	NA	Intergenic	L2b|LINE|L2	-22191	NM_001355529	100130771	Hs.719432	NM_001355526	ENSG00000185055	EFCAB10	-	EF-hand calcium binding domain 10	protein-coding
31.2333-2	chr12	65574581	65575131	+	0.0666667	NA	intron (NR_120434, intron 3 of 4)	L1ME1|LINE|L1	-17545	NR_135033	105369187	Hs.738044	NR_135033	ENSG00000250748	LOC105369187	-	uncharacterized LOC105369187	ncRNA
16.9333-13	chr3	46188449	46188902	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	19638	NM_001295	1230	Hs.301921	NM_001295	ENSG00000163823	CCR1	CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1	C-C motif chemokine receptor 1	protein-coding
23.6333-8	chr5	19925672	19926158	+	0.0666667	NA	intron (NM_001349562, intron 2 of 13)	Tigger2b_Pri|DNA|TcMar-Tigger	-39643	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
11.5-12	chr7	37910967	37911281	+	0.0666667	NA	intron (NM_003014, intron 4 of 5)	intron (NM_003014, intron 4 of 5)	5693	NM_003014	6424	Hs.658169	NM_003014	ENSG00000106483	SFRP4	FRP-4|FRPHE|FRZB-2|PYL|sFRP-4	secreted frizzled related protein 4	protein-coding
15.5-4	chr2	164367518	164367976	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	200748	NM_001303422	2888	Hs.411881	NM_004490	ENSG00000115290	GRB14	-	growth factor receptor bound protein 14	protein-coding
7.93333-5	chr8	89562549	89562715	+	0.0666667	NA	Intergenic	MER5A|DNA|hAT-Charlie	195079	NR_125822	101929709	Hs.651324	NR_125822	ENSG00000251136	LOC101929709	-	uncharacterized LOC101929709	ncRNA
16.1-8	chr4	76465703	76466126	+	0.0666667	NA	intron (NM_020859, intron 1 of 10)	intron (NM_020859, intron 1 of 10)	30685	NM_020859	57619	Hs.683808	NM_020859	ENSG00000138771	SHROOM3	APXL3|MSTP013|SHRM|ShrmL	shroom family member 3	protein-coding
11.1333-3	chr6	92809498	92809739	+	0.0666667	NA	Intergenic	Intergenic	609941	NM_001288629	2045	Hs.73962	NM_004440	ENSG00000135333	EPHA7	EHK-3|EHK3|EK11|HEK11	EPH receptor A7	protein-coding
19.4667-5	chr3	195003679	195004220	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-90639	NR_104188	100874528	Hs.581659	NR_104188	ENSG00000233303	XXYLT1-AS1	-	XXYLT1 antisense RNA 1	ncRNA
10.9	chr10	29329315	29329633	+	0.0666667	NA	Intergenic	Intergenic	40404	NM_032517	84569	Hs.558572	NM_032517	ENSG00000120563	LYZL1	KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1	lysozyme like 1	protein-coding
15.4667-10	chr16	28090617	28091037	+	0.0666667	NA	Intergenic	Intergenic	-27113	NM_001323901	146395	Hs.91910	NM_144675	ENSG00000169181	GSG1L	PRO19651	GSG1 like	protein-coding
21.3-15	chr3	101157837	101158233	+	0.0666667	NA	Intergenic	LTR80A|LTR|ERVL	162540	NM_016247	50939	Hs.209249	NM_016247	ENSG00000081148	IMPG2	IPM200|RP56|SPACRCAN|VMD5	interphotoreceptor matrix proteoglycan 2	protein-coding
7.4-2	chr11	64121026	64121186	+	0.0666667	NA	intron (NM_014067, intron 3 of 10)	intron (NM_014067, intron 3 of 10)	17216	NM_013280	23769	Hs.584876	NM_013280	ENSG00000126500	FLRT1	SPG68	fibronectin leucine rich transmembrane protein 1	protein-coding
17.2667	chr1	2400299	2400633	+	0.0666667	NA	intron (NM_007033, intron 4 of 6)	intron (NM_007033, intron 4 of 6)	8625	NM_007033	11079	Hs.525527	NM_007033	ENSG00000157916	RER1	-	retention in endoplasmic reticulum sorting receptor 1	protein-coding
14.2333-13	chr4	187509369	187509711	+	0.0666667	NA	Intergenic	Intergenic	-3927	NR_038931	339975	Hs.639361	NR_038931		LOC339975	-	uncharacterized LOC339975	ncRNA
9.49999	chr8	78051933	78052177	+	0.0666667	NA	Intergenic	L1PB4|LINE|L1	-464285	NM_006823	5569	Hs.433700	NM_006823	ENSG00000171033	PKIA	PRKACN1	cAMP-dependent protein kinase inhibitor alpha	protein-coding
7.93333-4	chr7	158165138	158165284	+	0.0666667	NA	intron (NM_130843, intron 6 of 21)	intron (NM_130843, intron 6 of 21)	310626	NR_038966	100506585	Hs.661265	NR_038966		LOC100506585	-	uncharacterized LOC100506585	ncRNA
20.2667-12	chr8	121881319	121881814	+	0.0666667	NA	Intergenic	Intergenic	-240126	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
12.8333-14	chr9	120151445	120151816	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	93420	NR_029604	406939		NR_029604	ENSG00000207814	MIR147A	MIR147|MIRN147|hsa-mir-147a	microRNA 147a	ncRNA
20.5-2	chr15	60080340	60080838	+	0.0666667	NA	Intergenic	Intergenic	76278	NM_012182	27023	Hs.734475	NM_012182	ENSG00000171956	FOXB1	FKH5|HFKH-5	forkhead box B1	protein-coding
8.3-4	chr6	51985059	51985223	+	0.0666667	NA	intron (NM_138694, intron 35 of 66)	intron (NM_138694, intron 35 of 66)	102472	NM_138694	5314	Hs.662050	NM_138694	ENSG00000170927	PKHD1	ARPKD|FCYT|FPC|PKD4|TIGM1	PKHD1 ciliary IPT domain containing fibrocystin/polyductin	protein-coding
27.3667-8	chr6	61588979	61589539	+	0.0666667	NA	intron (NR_146870, intron 14 of 15)	intron (NR_146870, intron 14 of 15)	15129	NM_001190706	100463487		NM_001190706		MTRNR2L9	HN9	MT-RNR2 like 9	protein-coding
27.9667-9	chr3	88545590	88546043	+	0.0666667	NA	Intergenic	THE1B|LTR|ERVL-MaLR	207360	NM_001368165	111064647		NM_001368165		CSNKA2IP	-	casein kinase 2 subunit alpha' interacting protein	protein-coding
6.3-4	chr6	52479476	52479632	+	0.0666667	NA	intron (NR_033327, intron 7 of 9)	intron (NR_033327, intron 7 of 9)	58546	NM_001172420	114327	Hs.403171	NM_018100	ENSG00000096093	EFHC1	EJM1|dJ304B14.2	EF-hand domain containing 1	protein-coding
19.9333-19	chr8	103821854	103822366	+	0.0666667	NA	intron (NR_145711, intron 1 of 21)	intron (NR_145711, intron 1 of 21)	2890	NM_001348508	9699	Hs.655271	NM_014677	ENSG00000176406	RIMS2	OBOE|RAB3IP3|RIM2	regulating synaptic membrane exocytosis 2	protein-coding
25.6667-5	chr22	46742394	46742956	+	0.0666667	NA	Intergenic	Intergenic	-4423	NM_022766	64781	Hs.200668	NM_022766	ENSG00000100422	CERK	LK4|dA59H18.2|dA59H18.3|hCERK	ceramide kinase	protein-coding
22.8666-9	chr5	152393156	152393804	+	0.0666667	NA	intron (NM_020167, intron 3 of 3)	intron (NM_020167, intron 3 of 3)	11799	NM_020167	56923	Hs.731911	NM_020167	ENSG00000132911	NMUR2	FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1	neuromedin U receptor 2	protein-coding
24.4-19	chr3	7590580	7591281	+	0.0666667	NA	intron (NM_000844, intron 8 of 9)	L2b|LINE|L2	-55646	NR_046606	100873937	Hs.570608	NR_046606	ENSG00000236202	GRM7-AS1	-	GRM7 antisense RNA 1	ncRNA
20.9667-8	chr20	54909153	54909676	+	0.0666667	NA	Intergenic	Intergenic	433821	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
16.1667-9	chr19	743156	743398	+	0.0666667	NA	intron (NM_002579, intron 8 of 8)	intron (NM_002579, intron 8 of 8)	-7835	NR_135168	126353	Hs.439180	NM_173481	ENSG00000099812	MISP	C19orf21|MISP1	mitotic spindle positioning	protein-coding
25.4333-3	chr13	99805722	99806179	+	0.0666667	NA	intron (NR_120421, intron 1 of 4)	L1ME4c|LINE|L1	-76949	NR_120384	101927465	Hs.130690	NR_046525		CLYBL-AS1	-	CLYBL antisense RNA 1	ncRNA
32-4	chr12	56151915	56152456	+	0.0666667	NA	promoter-TSS (NM_001199629)	promoter-TSS (NM_001199629)	-402	NM_001199629	140465	Hs.632731	NM_002475	ENSG00000196465	MYL6B	MLC1SA	myosin light chain 6B	protein-coding
9.96667	chr16	27658928	27659077	+	0.0666667	NA	intron (NM_015202, intron 6 of 27)	AluSz|SINE|Alu	60027	NR_147898	100128079	Hs.610277	NR_147898		LOC100128079	-	uncharacterized LOC100128079	ncRNA
17.4333-7	chr3	128798743	128799177	+	0.0666667	NA	intron (NM_004637, intron 3 of 5)	intron (NM_004637, intron 3 of 5)	-47848	NR_162138	113219457		NR_162138		MIR12124	-	microRNA 12124	ncRNA
26.2-9	chr2	57131853	57132256	+	0.0666667	NA	Intergenic	L1PB3|LINE|L1	-775597	NM_001288837	7444	Hs.715298	NM_006296	ENSG00000028116	VRK2	-	VRK serine/threonine kinase 2	protein-coding
11.6667-6	chr19	39829973	39830278	+	0.0666667	NA	promoter-TSS (NR_106777)	promoter-TSS (NR_106777)	-323	NR_106777	102465974		NR_106777	ENSG00000277759	MIR6719	hsa-mir-6719	microRNA 6719	ncRNA
28.3333-19	chrX	97197576	97198407	+	0.0666667	NA	intron (NM_007309, intron 22 of 26)	intron (NM_007309, intron 22 of 26)	314083	NM_013347	29935	Hs.659349	NM_013347	ENSG00000204086	RPA4	HSU24186	replication protein A4	protein-coding
5.96666	chr2	49992405	49992554	+	0.0666667	NA	intron (NM_001330093, intron 21 of 22)	AluSc|SINE|Alu	-18276	NM_001320157	9378	Hs.637685	NM_004801	ENSG00000179915	NRXN1	Hs.22998|PTHSL2|SCZD17	neurexin 1	protein-coding
9.83334	chr6	43563215	43563362	+	0.0666667	NA	TTS (NM_001363658)	TTS (NM_001363658)	12750	NM_020750	57510	Hs.203206	NM_020750	ENSG00000124571	XPO5	exp5	exportin 5	protein-coding
13.3333-2	chr1	93564677	93565048	+	0.0666667	NA	intron (NM_001308251, intron 7 of 7)	intron (NM_001308251, intron 7 of 7)	20300	NM_001308251	8412	Hs.36958	NM_003567	ENSG00000137936	BCAR3	AND-34|NSP2|SH2D3B	BCAR3 adaptor protein, NSP family member	protein-coding
15.1-15	chr8	55770624	55770879	+	0.0666667	NA	intron (NM_001286660, intron 1 of 2)	intron (NM_001286660, intron 1 of 2)	2627	NM_152417	137695	Hs.420076	NM_152417	ENSG00000167904	TMEM68	-	transmembrane protein 68	protein-coding
26.4333-3	chr12	115998960	115999432	+	0.0666667	NA	intron (NM_015335, intron 14 of 30)	AluSx1|SINE|Alu	149458	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA
14.2667-12	chr9	86414947	86415237	+	0.0666667	NA	Intergenic	Intergenic	-60682	NM_001185074	79670	Hs.597057	NM_024617	ENSG00000083223	TUT7	PAPD6|TENT3B|ZCCHC6	terminal uridylyl transferase 7	protein-coding
20.7667-7	chr3	8547799	8548317	+	0.0666667	NA	intron (NM_014583, intron 3 of 5)	Tigger3a|DNA|TcMar-Tigger	-23724	NR_024065	29931	Hs.433151	NM_013343		LINC00312	ERR-10|ERR10|LMCD1DN|LOH3CR2A|NAG-7|NAG7|NCRNA00312	long intergenic non-protein coding RNA 312	ncRNA
22.9333-11	chr4	181378573	181379072	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-113793	NR_149139	101928679	Hs.149643	NR_149139		LINC02500	-	long intergenic non-protein coding RNA 2500	ncRNA
24.1-4	chr2	34446675	34447377	+	0.0666667	NA	Intergenic	Intergenic	-230531	NR_126404	104355288	Hs.624529	NR_126404	ENSG00000228262	LINC01320	-	long intergenic non-protein coding RNA 1320	ncRNA
13.8333-3	chr10	128015023	128015362	+	0.0666667	NA	intron (NM_001323354, intron 1 of 19)	L1ME2|LINE|L1	17045	NM_001323354	5791	Hs.127022	NM_006504	ENSG00000132334	PTPRE	HPTPE|PTPE|R-PTP-EPSILON	protein tyrosine phosphatase receptor type E	protein-coding
13.7-3	chr19	18245128	18245338	+	0.0666667	NA	intron (NM_000923, intron 1 of 15)	AluSx1|SINE|Alu	2967	NM_000923	5143	Hs.132584	NM_000923	ENSG00000105650	PDE4C	DPDE1|PDE21	phosphodiesterase 4C	protein-coding
17.1333-12	chr19	46264950	46265418	+	0.0666667	NA	Intergenic	Intergenic	-31858	NM_152795	64344	Hs.420830	NM_022462	ENSG00000124440	HIF3A	HIF-3A|HIF3-alpha-1|IPAS|MOP7|PASD7|bHLHe17	hypoxia inducible factor 3 subunit alpha	protein-coding
23.0333-4	chr12	14507624	14508019	+	0.0666667	NA	intron (NM_024829, intron 8 of 10)	intron (NM_024829, intron 8 of 10)	-59911	NR_120465	101928290	Hs.131933	NR_120465	ENSG00000256751	PLBD1-AS1	-	PLBD1 antisense RNA 1	ncRNA
18.4333-11	chr8	104031183	104031631	+	0.0666667	NA	intron (NR_145710, intron 24 of 29)	intron (NR_145710, intron 24 of 29)	-191928	NM_001282882	9699	Hs.655271	NM_014677	ENSG00000176406	RIMS2	OBOE|RAB3IP3|RIM2	regulating synaptic membrane exocytosis 2	protein-coding
18.4333-6	chr2	117585563	117586093	+	0.0666667	NA	Intergenic	L1MA7|LINE|L1	-228863	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
8.36667-3	chr17	64069222	64069392	+	0.0666667	NA	intron (NM_001433, intron 6 of 21)	MLT1H-int|LTR|ERVL-MaLR	-48673	NM_001099786	3384	Hs.431460	NM_000873	ENSG00000108622	ICAM2	CD102	intercellular adhesion molecule 2	protein-coding
11.9667	chr11	81892185	81892404	+	0.0666667	NA	intron (NR_120571, intron 6 of 7)	L1M2|LINE|L1	-1458	NR_036186	100422823		NR_036186	ENSG00000264110	MIR4300	-	microRNA 4300	ncRNA
15.1-6	chr13	57733489	57733865	+	0.0666667	NA	Intergenic	Intergenic	101933	NM_001040429	27253	Hs.106511	NM_014459	ENSG00000118946	PCDH17	PCDH68|PCH68	protocadherin 17	protein-coding
26.8333-4	chr12	30579484	30580158	+	0.0666667	NA	Intergenic	Intergenic	97423	NM_001190995	10526	Hs.505136	NM_006390	ENSG00000133704	IPO8	RANBP8	importin 8	protein-coding
11.8333-7	chr22	19354884	19355231	+	0.0666667	NA	intron (NM_003325, intron 21 of 24)	AluJo|SINE|Alu	-63338	NM_001835	8218	Hs.368266	NM_001835	ENSG00000070371	CLTCL1	CHC22|CLH22|CLTCL|CLTD	clathrin heavy chain like 1	protein-coding
11.0667-5	chr5	131406868	131407084	+	0.0666667	NA	Intergenic	Intergenic	142967	NM_020240	56990	Hs.508829	NM_020240	ENSG00000158985	CDC42SE2	SPEC2	CDC42 small effector 2	protein-coding
11.0333-5	chr8	112408545	112408713	+	0.0666667	NA	intron (NM_052900, intron 32 of 68)	intron (NM_052900, intron 32 of 68)	-234864	NR_031745	100302225		NR_031745	ENSG00000238399	MIR2053	hsa-mir-2053	microRNA 2053	ncRNA
17.4333-9	chr8	124658620	124659011	+	0.0666667	NA	intron (NM_001282971, intron 3 of 14)	MSTA|LTR|ERVL-MaLR	69658	NM_001363301	9788	Hs.336994	NM_014751	ENSG00000170873	MTSS1	MIM|MIMA|MIMB	MTSS I-BAR domain containing 1	protein-coding
20.1	chr11	109745224	109745707	+	0.0666667	NA	Intergenic	Intergenic	323275	NM_207645	399947	Hs.172982	NM_207645	ENSG00000185742	C11orf87	LOH11CR1A|NEURIM1	chromosome 11 open reading frame 87	protein-coding
18.1333-4	chr11	34972059	34972476	+	0.0666667	NA	intron (NM_003477, intron 7 of 10)	L1MEc|LINE|L1	30430	NR_039836	100616437		NR_039836	ENSG00000251862	MIR1343	-	microRNA 1343	ncRNA
13.8333	chr10	53720074	53720461	+	0.0666667	NA	Intergenic	Intergenic	-765963	NR_134503	105378311	Hs.623892	NR_134503	ENSG00000234173	LOC105378311	-	uncharacterized LOC105378311	ncRNA
6.3-2	chr2	82150305	82150427	+	0.0666667	NA	Intergenic	Intergenic	-683420	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
8.16666-4	chr2	71860003	71860231	+	0.0666667	NA	Intergenic	Intergenic	287745	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
17.7333-15	chr7	1150759	1151207	+	0.0666667	NA	3' UTR (NM_001365383, exon 6 of 6)	3' UTR (NM_001365383, exon 6 of 6)	9213	NR_158186	90637	Hs.648111	NM_182491	ENSG00000178381	ZFAND2A	AIRAP	zinc finger AN1-type containing 2A	protein-coding
14.5667-6	chr3	21864473	21864789	+	0.0666667	NA	Intergenic	Intergenic	-92508	NR_046876	100874221	Hs.160616	NR_046876	ENSG00000223351	ZNF385D-AS2	-	ZNF385D antisense RNA 2	ncRNA
23.2333-10	chr8	119215673	119216267	+	0.0666667	NA	intron (NR_149111, intron 1 of 1)	intron (NR_149111, intron 1 of 1)	7607	NM_052886	114569	Hs.201083	NM_052886	ENSG00000147676	MAL2	-	mal, T cell differentiation protein 2 (gene/pseudogene)	protein-coding
12.1-10	chr3	153833983	153834306	+	0.0666667	NA	Intergenic	MSTB|LTR|ERVL-MaLR	-71618	NR_146713	105374165	Hs.637991	NR_146713		LINC02006	-	long intergenic non-protein coding RNA 2006	ncRNA
21.2-9	chr14	88847656	88848120	+	0.0666667	NA	intron (NR_159362, intron 7 of 14)	AluSq2|SINE|Alu	23237	NR_159362	123016	Hs.303055	NM_144596	ENSG00000165533	TTC8	BBS8|RP51	tetratricopeptide repeat domain 8	protein-coding
33.8333-5	chr16	26635612	26636463	+	0.0666667	NA	Intergenic	HAL1b|LINE|L1	-430890	NM_001145545	162083	Hs.120831	NM_182831		C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding
8.76667-2	chr5	60766290	60766464	+	0.0666667	NA	intron (NM_024930, intron 6 of 8)	intron (NM_024930, intron 6 of 8)	-66211	NM_001145208	55789	Hs.482233	NM_018369	ENSG00000035499	DEPDC1B	BRCC3|XTP1	DEP domain containing 1B	protein-coding
15.8333-10	chr21	16013986	16014223	+	0.0666667	NA	Intergenic	Intergenic	-56384	NR_136542	388815	Hs.473394	NR_027790		MIR99AHG	C21orf34|C21orf35|LINC00478|MONC	mir-99a-let-7c cluster host gene	ncRNA
18.1333-7	chr14	33905631	33905982	+	0.0666667	NA	Intergenic	L1MC4a|LINE|L1	45268	NM_001308103	112399	Hs.135507	NM_022073	ENSG00000129521	EGLN3	HIFP4H3|HIFPH3|PHD3	egl-9 family hypoxia inducible factor 3	protein-coding
18.4	chr1	85703190	85703598	+	0.0666667	NA	intron (NM_017953, intron 4 of 9)	L1ME3B|LINE|L1	5039	NM_017953	54680	Hs.5111	NM_017953	ENSG00000117174	ZNHIT6	BCD1|C1orf181|NY-BR-75	zinc finger HIT-type containing 6	protein-coding
16.4667-9	chr5	144453620	144454096	+	0.0666667	NA	intron (NM_001370487, intron 2 of 2)	intron (NM_001370487, intron 2 of 2)	248467	NM_001370486	57528	Hs.7093	NM_020768	ENSG00000183775	KCTD16	-	potassium channel tetramerization domain containing 16	protein-coding
23.1667-2	chr4	108813942	108814370	+	0.0666667	NA	intron (NM_198721, intron 36 of 36)	L3|LINE|CR1	-51103	NM_031279	64850	Hs.106576	NM_031279	ENSG00000164089	ETNPPL	AGXT2L1	ethanolamine-phosphate phospho-lyase	protein-coding
20.3333-7	chr11	102533879	102534420	+	0.0666667	NA	Intergenic	Intergenic	-3402	NM_002423	4316	Hs.2256	NM_002423	ENSG00000137673	MMP7	MMP-7|MPSL1|PUMP-1	matrix metallopeptidase 7	protein-coding
22.4667-12	chr7	138057820	138058352	+	0.0666667	NA	Intergenic	L1M8|LINE|L1	-18373	NM_001190907	6718	Hs.201667	NM_005989	ENSG00000122787	AKR1D1	3o5bred|CBAS2|SRD5B1	aldo-keto reductase family 1 member D1	protein-coding
28.9	chr1	93091680	93092526	+	0.0666667	NA	intron (NM_001164393, intron 1 of 12)	intron (NM_001164393, intron 1 of 12)	12820	NM_007358	22823	Hs.31016	NM_007358	ENSG00000143033	MTF2	M96|PCL2|TDRD19A|dJ976O13.2	metal response element binding transcription factor 2	protein-coding
14.4-12	chr5	67907218	67907536	+	0.0666667	NA	Intergenic	L1MA9|LINE|L1	114164	NR_130779	101928858	Hs.334066	NR_130779	ENSG00000249364	LOC101928858	-	uncharacterized LOC101928858	ncRNA
14.8667-9	chr22	20991583	20992017	+	0.0666667	NA	exon (NM_006767, exon 9 of 21)	exon (NM_006767, exon 9 of 21)	9503	NM_006767	8216	Hs.78788	NM_006767	ENSG00000099949	LZTR1	BTBD29|LZTR-1|NS10|NS2|SWNTS2	leucine zipper like transcription regulator 1	protein-coding
27.3-8	chr5	154897345	154897754	+	0.0666667	NA	intron (NM_015465, intron 23 of 27)	AluSz|SINE|Alu	38922	NM_001301077	9337	Hs.26703	NM_004779	ENSG00000155508	CNOT8	CAF1|CALIF|Caf1b|POP2|hCAF1	CCR4-NOT transcription complex subunit 8	protein-coding
8.1	chr11	67603037	67603158	+	0.0666667	NA	non-coding (NR_130935, exon 3 of 3)	non-coding (NR_130935, exon 3 of 3)	3609	NR_130935	100505621	Hs.382074	NM_173578	ENSG00000184224	C11orf72	-	chromosome 11 open reading frame 72 (putative)	ncRNA
12.0333	chr12	70918758	70919051	+	0.0666667	NA	intron (NM_002849, intron 1 of 13)	intron (NM_002849, intron 1 of 13)	1834	NM_002849	5801	Hs.506076	NM_002849	ENSG00000153233	PTPRR	EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ	protein tyrosine phosphatase receptor type R	protein-coding
19.0333-3	chr11	110568085	110568619	+	0.0666667	NA	Intergenic	L1MCa|LINE|L1	138404	NM_004109	2230	Hs.744	NM_004109	ENSG00000137714	FDX1	ADX|FDX|LOH11CR1D	ferredoxin 1	protein-coding
19.0333-4	chr12	26684755	26685189	+	0.0666667	NA	intron (NM_002223, intron 11 of 56)	intron (NM_002223, intron 11 of 56)	148222	NM_002223	3709	Hs.512235	NM_002223	ENSG00000123104	ITPR2	ANHD|CFAP48|INSP3R2|IP3R2	inositol 1,4,5-trisphosphate receptor type 2	protein-coding
23.5666-2	chr3	191327277	191327978	+	0.0666667	NA	intron (NM_198152, intron 2 of 8)	LTR33|LTR|ERVL	-1767	NM_178335	152137	Hs.478682	NM_174908	ENSG00000152492	CCDC50	C3orf6|DFNA44|YMER	coiled-coil domain containing 50	protein-coding
8.63333-2	chr14	51806641	51806813	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-53885	NM_001243774	54331	Hs.187772	NM_053064	ENSG00000186469	GNG2	-	G protein subunit gamma 2	protein-coding
25.2666-2	chrX	36577579	36578298	+	0.0666667	NA	Intergenic	MSTB|LTR|ERVL-MaLR	-137646	NR_110412	101928627	Hs.590831	NR_110412	ENSG00000226484	LOC101928627	-	uncharacterized LOC101928627	ncRNA
22.2-8	chr18	71157790	71158206	+	0.0666667	NA	Intergenic	L1ME3C|LINE|L1	420958	NR_038325	100505776	Hs.202072	NR_038325	ENSG00000260676	LINC01541	UTAT39	long intergenic non-protein coding RNA 1541	ncRNA
14.2333-9	chr22	26315279	26315544	+	0.0666667	NA	intron (NM_001184776, intron 9 of 14)	AluJr|SINE|Alu	-113849	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding
9.9-3	chr2	179643951	179644186	+	0.0666667	NA	intron (NR_148056, intron 3 of 9)	intron (NR_148056, intron 3 of 9)	16126	NM_001352812	151126	Hs.655005	NM_152520	ENSG00000144331	ZNF385B	ZNF533	zinc finger protein 385B	protein-coding
9.46666	chr10	126005564	126005839	+	0.0666667	NA	intron (NM_001363549, intron 7 of 10)	intron (NM_001363549, intron 7 of 10)	-32428	NR_102707	101410540	Hs.557889	NR_102707	ENSG00000233409	FANK1-AS1	-	FANK1 antisense RNA 1	ncRNA
18.9333-9	chr4	95266397	95266712	+	0.0666667	NA	intron (NM_003728, intron 4 of 15)	intron (NM_003728, intron 4 of 15)	175063	NM_001256794	658	Hs.598475	NM_001203	ENSG00000138696	BMPR1B	ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293	bone morphogenetic protein receptor type 1B	protein-coding
19.2667-12	chr9	76590552	76591080	+	0.0666667	NA	Intergenic	Intergenic	90183	NM_001097636	2650	Hs.521568	NM_001490	ENSG00000187210	GCNT1	C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2	glucosaminyl (N-acetyl) transferase 1	protein-coding
15-3	chr10	49598712	49599036	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-10221	NM_020984	1103	Hs.302002	NM_020549	ENSG00000070748	CHAT	CHOACTASE|CMS1A|CMS1A2|CMS6	choline O-acetyltransferase	protein-coding
23.5-10	chr2	27179221	27179880	+	0.0666667	NA	Intergenic	Intergenic	30546	NM_175769	150921	Hs.591583	NM_175769	ENSG00000163792	TCF23	OUT|TCF-23|bHLHa24	transcription factor 23	protein-coding
19.6-20	chr8	126955752	126956249	+	0.0666667	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-57154	NR_045262	100750225	Hs.571530	NR_045262	ENSG00000253438	PCAT1	PCA1|PCAT-1	prostate cancer associated transcript 1	ncRNA
28.0333	chr1	91046903	91047576	+	0.0666667	NA	Intergenic	L2b|LINE|L2	-24984	NM_032186	84146	Hs.173001	NM_016620	ENSG00000122482	ZNF644	BM-005|MYP21|NatF|ZEP-2	zinc finger protein 644	protein-coding
16.7333-11	chr5	21614875	21615366	+	0.0666667	NA	Intergenic	LTR17|LTR|ERV1	155640	NR_027026	728411	Hs.88181	NM_207331	ENSG00000183666	GUSBP1	-	GUSB pseudogene 1	pseudo
20.2333-2	chr1	45155671	45156228	+	0.0666667	NA	intron (NM_020883, intron 1 of 13)	L1PB1|LINE|L1	50656	NM_020883	57643	Hs.656613	NM_020883	ENSG00000162415	ZSWIM5	-	zinc finger SWIM-type containing 5	protein-coding
13.6667-5	chr16	49247683	49248056	+	0.0666667	NA	Intergenic	L2b|LINE|L2	33969	NM_004352	869	Hs.458423	NM_004352	ENSG00000102924	CBLN1	-	cerebellin 1 precursor	protein-coding
15.0333-9	chr2	81542696	81542998	+	0.0666667	NA	Intergenic	Intergenic	-75901	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
8.16666-2	chr10	57621148	57621344	+	0.0666667	NA	Intergenic	Intergenic	-316687	NR_037490	100500834		NR_037490	ENSG00000264747	MIR3924	-	microRNA 3924	ncRNA
18.5333-6	chr14	20521805	20522150	+	0.0666667	NA	Intergenic	L1MC4|LINE|L1	11505	NM_001012975	338879	Hs.451057	NM_001012975	ENSG00000182545	RNASE10	RAH1|RNASE9	ribonuclease A family member 10 (inactive)	protein-coding
28.8-15	chr9	4374929	4375587	+	0.0666667	NA	Intergenic	Intergenic	-75190	NM_001042413	169792	Hs.162125	NM_152629	ENSG00000107249	GLIS3	NDH|ZNF515	GLIS family zinc finger 3	protein-coding
14.5333	chr10	114255589	114255923	+	0.0666667	NA	intron (NM_001272046, intron 4 of 13)	intron (NM_001272046, intron 4 of 13)	16142	NM_001320804	340706	Hs.197741	NM_198496	ENSG00000165816	VWA2	AMACO|CCSP-2|CCSP2|NET42	von Willebrand factor A domain containing 2	protein-coding
10.2-6	chr6	152192508	152192748	+	0.0666667	NA	intron (NM_182961, intron 127 of 145)	AluSx3|SINE|Alu	-7250	NM_001347701	23345	Hs.12967	NM_015293	ENSG00000131018	SYNE1	8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2	spectrin repeat containing nuclear envelope protein 1	protein-coding
11.4-6	chr3	20076879	20077071	+	0.0666667	NA	intron (NM_003884, intron 2 of 17)	intron (NM_003884, intron 2 of 17)	36529	NM_003884	8850	Hs.533055	NM_003884	ENSG00000114166	KAT2B	CAF|P/CAF|PCAF	lysine acetyltransferase 2B	protein-coding
25.8-6	chr12	73174104	73174811	+	0.0666667	NA	intron (NR_110130, intron 2 of 3)	intron (NR_110130, intron 2 of 3)	15267	NR_110130	101928137	Hs.694666	NR_110130	ENSG00000258123	LINC02444	-	long intergenic non-protein coding RNA 2444	ncRNA
18.5333-7	chr14	46810611	46811147	+	0.0666667	NA	Intergenic	LTR52|LTR|ERVL	-159098	NM_080746	140801	Hs.308332	NM_080746	ENSG00000165496	RPL10L	RPL10_5_1358	ribosomal protein L10 like	protein-coding
14.5667-2	chr14	75774502	75774822	+	0.0666667	NA	intron (NM_015072, intron 21 of 31)	intron (NM_015072, intron 21 of 31)	113416	NM_015072	23093	Hs.709609	NM_015072	ENSG00000119685	TTLL5	CORD19|KIAA0998|STAMP	tubulin tyrosine ligase like 5	protein-coding
12.5667-5	chr18	56276452	56276739	+	0.0666667	NA	Intergenic	Intergenic	-85333	NR_148972	642484		NR_148972	ENSG00000206129	LOC642484	-	uncharacterized LOC642484	ncRNA
11.3333-6	chr5	39131363	39131658	+	0.0666667	NA	intron (NM_001243093, intron 9 of 18)	intron (NM_001243093, intron 9 of 18)	-57111	NM_001285440	253260	Hs.407926	NM_152756	ENSG00000164327	RICTOR	AVO3|PIA|hAVO3	RPTOR independent companion of MTOR complex 2	protein-coding
9.8	chr10	28087715	28087881	+	0.0666667	NA	intron (NR_134518, intron 11 of 16)	intron (NR_134518, intron 11 of 16)	-14420	NR_132973	106635548		NR_132973		SNORD130	-	small nucleolar RNA, C/D box 130	snoRNA
28.4666-6	chr4	86088486	86089278	+	0.0666667	NA	intron (NM_001318069, intron 9 of 13)	intron (NM_001318069, intron 9 of 13)	-30924	NR_110879	101929064	Hs.662221	NR_110879	ENSG00000250062	LOC101929064	-	uncharacterized LOC101929064	ncRNA
18.4667-5	chr16	48316442	48316840	+	0.0666667	NA	intron (NM_031490, intron 11 of 14)	intron (NM_031490, intron 11 of 14)	49246	NM_001006610	6477	Hs.706828	NM_003031	ENSG00000196470	SIAH1	SIAH1A	siah E3 ubiquitin protein ligase 1	protein-coding
22.4333-14	chr5	132265971	132266494	+	0.0666667	NA	intron (NM_001131027, intron 2 of 5)	intron (NM_001131027, intron 2 of 5)	8536	NM_003687	8572	Hs.424312	NM_003687	ENSG00000131435	PDLIM4	RIL	PDZ and LIM domain 4	protein-coding
21.6-14	chr5	59975718	59976117	+	0.0666667	NA	intron (NM_001165899, intron 3 of 16)	intron (NM_001165899, intron 3 of 16)	-82191	NM_001104631	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
19.2667-11	chr9	75166224	75166712	+	0.0666667	NA	Intergenic	L1MB4|LINE|L1	77954	NM_012383	26578	Hs.494192	NM_012383	ENSG00000134996	OSTF1	OSF|SH3P2|bA235O14.1	osteoclast stimulating factor 1	protein-coding
17.3333-8	chr4	76623545	76624017	+	0.0666667	NA	intron (NM_020859, intron 2 of 10)	intron (NM_020859, intron 2 of 10)	48230	NR_039655	100616254		NR_039655	ENSG00000283682	MIR548AH	-	microRNA 548ah	ncRNA
14.8333-13	chr8	77052628	77052968	+	0.0666667	NA	Intergenic	Intergenic	-51754	NM_001172086	5828	Hs.437966	NM_000318	ENSG00000164751	PEX2	PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3	peroxisomal biogenesis factor 2	protein-coding
3.73334	chr3	119011916	119011972	+	0.0666667	NA	intron (NM_001353319, intron 1 of 7)	intron (NM_001353319, intron 1 of 7)	22902	NM_001353324	152404	Hs.112873	NM_152538	ENSG00000144847	IGSF11	BT-IgSF|CT119|CXADRL1|Igsf13|VSIG3	immunoglobulin superfamily member 11	protein-coding
15.7-8	chr4	61185082	61185390	+	0.0666667	NA	Intergenic	L1M2c|LINE|L1	-15994	NM_001371343								
19.0333-13	chr6	28269939	28270422	+	0.0666667	NA	intron (NM_001287421, intron 1 of 3)	Tigger12|DNA|TcMar-Tigger	2821	NM_001287421	7741	Hs.157883	NM_007151	ENSG00000197062	ZSCAN26	SRE-ZBP|SREZBP|ZNF187	zinc finger and SCAN domain containing 26	protein-coding
20.6333-7	chr18	10109907	10110476	+	0.0666667	NA	Intergenic	Intergenic	196175	NM_194434	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding
20.1333-2	chr10	61275398	61275964	+	0.0666667	NA	Intergenic	MLT2B1|LTR|ERVL	-176958	NR_120643	101928781	Hs.568856	NR_120643		TMEM26-AS1	-	TMEM26 antisense RNA 1	ncRNA
5.03334-3	chr6	37551889	37551964	+	0.0666667	NA	Intergenic	Intergenic	3496	NR_039669	100616413		NR_039669	ENSG00000263926	MIR4462	-	microRNA 4462	ncRNA
5.43333	chr4	38990626	38990773	+	0.0666667	NA	intron (NM_001303228, intron 3 of 6)	intron (NM_001303228, intron 3 of 6)	41710	NM_001303228	80008	Hs.374147	NM_024943	ENSG00000121895	TMEM156	-	transmembrane protein 156	protein-coding
29.7667-8	chr8	120366200	120366850	+	0.0666667	NA	intron (NM_021110, intron 45 of 47)	intron (NM_021110, intron 45 of 47)	78625	NM_014078	28998	Hs.333823	NM_014078	ENSG00000172172	MRPL13	L13|L13A|L13mt|RPL13|RPML13	mitochondrial ribosomal protein L13	protein-coding
28.4667-8	chr3	101039910	101040438	+	0.0666667	NA	Intergenic	(AT)n|Simple_repeat|Simple_repeat	-46684	NM_001349330	25890	Hs.477015	NM_015429	ENSG00000154175	ABI3BP	NESHBP|TARSH	ABI family member 3 binding protein	protein-coding
7.33333	chr11	74106630	74106809	+	0.0666667	NA	intron (NM_001286577, intron 12 of 32)	intron (NM_001286577, intron 12 of 32)	64283	NM_015531	26005	Hs.557938	NM_015531	ENSG00000168014	C2CD3	OFD14	C2 domain containing 3 centriole elongation regulator	protein-coding
17.7667-13	chr9	20572456	20572897	+	0.0666667	NA	intron (NM_001286691, intron 2 of 10)	AluSx1|SINE|Alu	49262	NM_001286691	4300	Hs.317248	NM_004529	ENSG00000171843	MLLT3	AF9|YEATS3	MLLT3 super elongation complex subunit	protein-coding
15.2667-10	chr5	91888625	91888968	+	0.0666667	NA	Intergenic	L1MA2|LINE|L1	-505479	NM_020801	57561	Hs.24684	NM_020801	ENSG00000113369	ARRDC3	TLIMP	arrestin domain containing 3	protein-coding
19.1667-2	chr11	131349009	131349531	+	0.0666667	NA	Intergenic	Intergenic	-21345	NM_001048209	50863	Hs.504352	NM_016522	ENSG00000182667	NTM	CEPU-1|HNT|IGLON2|NTRI	neurotrimin	protein-coding
11.4-13	chrX	68496487	68496749	+	0.0666667	NA	Intergenic	AluSz6|SINE|Alu	-2164	NM_001195214	286451	Hs.82719	NM_173834	ENSG00000181704	YIPF6	FinGER6	Yip1 domain family member 6	protein-coding
8.96667	chr10	78514844	78514999	+	0.0666667	NA	Intergenic	MIR3|SINE|MIR	247579	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA
29.8667-5	chr6	40669791	40670339	+	0.0666667	NA	Intergenic	LTR79|LTR|ERVL	-82701	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding
18.1-11	chr5	4611169	4611505	+	0.0666667	NA	Intergenic	Intergenic	-162144	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA
17.2333-4	chr17	66816828	66817233	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	-18087	NM_145811	27091	Hs.278907	NM_014404	ENSG00000075429	CACNG5	-	calcium voltage-gated channel auxiliary subunit gamma 5	protein-coding
25-3	chr15	75920000	75920550	+	0.0666667	NA	intron (NM_012170, intron 5 of 5)	intron (NM_012170, intron 5 of 5)	16397	NM_147188	26263	Hs.591115	NM_012170	ENSG00000167196	FBXO22	FBX22|FISTC1	F-box protein 22	protein-coding
19.6333-3	chr12	15591529	15592068	+	0.0666667	NA	intron (NM_030671, intron 13 of 13)	AluSc|SINE|Alu	45187	NM_030670	5800	Hs.160871	NM_002848	ENSG00000151490	PTPRO	GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O	protein tyrosine phosphatase receptor type O	protein-coding
18-4	chr10	99496313	99496655	+	0.0666667	NA	Intergenic	MLT2B1|LTR|ERVL	34693	NR_120618	101927324	Hs.642588	NR_120618	ENSG00000257582	LINC01475	-	long intergenic non-protein coding RNA 1475	ncRNA
30.7333-10	chr5	3895701	3896405	+	0.0666667	NA	Intergenic	Intergenic	300221	NM_024337	79192	Hs.424156	NM_024337	ENSG00000170549	IRX1	IRX-5|IRXA1	iroquois homeobox 1	protein-coding
14.0667-9	chr3	195928694	195929050	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-19863	NM_005781	10188	Hs.518513	NM_005781	ENSG00000061938	TNK2	ACK|ACK-1|ACK1|p21cdc42Hs	tyrosine kinase non receptor 2	protein-coding
20.8666-3	chr16	74793628	74794240	+	0.0666667	NA	Intergenic	Tigger3a|DNA|TcMar-Tigger	-19114	NM_024306	79152	Hs.461329	NM_024306	ENSG00000103089	FA2H	FAAH|FAH1|FAXDC1|SCS7|SPG35	fatty acid 2-hydroxylase	protein-coding
15.7-14	chr8	78401191	78401565	+	0.0666667	NA	Intergenic	Intergenic	-114962	NM_006823	5569	Hs.433700	NM_006823	ENSG00000171033	PKIA	PRKACN1	cAMP-dependent protein kinase inhibitor alpha	protein-coding
19.8333-15	chr8	125269457	125269852	+	0.0666667	NA	intron (NM_001349486, intron 5 of 7)	intron (NM_001349486, intron 5 of 7)	-160704	NM_025195	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding
5.36667	chr14	26424778	26424858	+	0.0666667	NA	Intergenic	(CCTT)n|Simple_repeat|Simple_repeat	128612	NM_001366398	4857	Hs.31588	NM_002515	ENSG00000139910	NOVA1	Nova-1	NOVA alternative splicing regulator 1	protein-coding
26.8-16	chr6	127280696	127281340	+	0.0666667	NA	intron (NM_001242852, intron 3 of 4)	intron (NM_001242852, intron 3 of 4)	14180	NM_001242850	81847	Hs.267120	NM_030963	ENSG00000118518	RNF146	-	ring finger protein 146	protein-coding
25.9667-7	chr2	184467475	184468027	+	0.0666667	NA	Intergenic	AluSp|SINE|Alu	88776	NR_039638	100616305		NR_039638	ENSG00000266808	MIR548AE1	-	microRNA 548ae-1	ncRNA
14.8667-10	chr3	99555779	99556149	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	-82630	NM_020351	1295	Hs.654548	NM_001850	ENSG00000144810	COL8A1	C3orf7	collagen type VIII alpha 1 chain	protein-coding
19.7333-4	chr19	50372109	50372686	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-4060	NM_007121	7376	Hs.432976	NM_007121	ENSG00000131408	NR1H2	LXR-b|LXRB|NER|NER-I|RIP15|UNR	nuclear receptor subfamily 1 group H member 2	protein-coding
19.5333-8	chr3	2166112	2166471	+	0.0666667	NA	intron (NM_175607, intron 2 of 24)	L1MA9|LINE|L1	-22050	NR_046555	100873976	Hs.611138	NR_046555	ENSG00000227588	CNTN4-AS2	-	CNTN4 antisense RNA 2	ncRNA
18-7	chr18	74027739	74028277	+	0.0666667	NA	Intergenic	AluSz6|SINE|Alu	119826	NM_001142958	201456	Hs.664011	NM_152676	ENSG00000141665	FBXO15	FBX15	F-box protein 15	protein-coding
11.6667-13	chrX	125902878	125903053	+	0.0666667	NA	Intergenic	L1PA16|LINE|L1	-206797	NR_110409	101928495	Hs.545998	NR_110409	ENSG00000237208	LOC101928495	-	uncharacterized LOC101928495	ncRNA
33.8667-10	chr6	126339265	126340022	+	0.0666667	NA	promoter-TSS (NM_001012507)	promoter-TSS (NM_001012507)	-146	NM_001286524	387103	Hs.486401	NM_001012507	ENSG00000203760	CENPW	C6orf173|CENP-W|CUG2	centromere protein W	protein-coding
16.0333-16	chr7	157302783	157303024	+	0.0666667	NA	Intergenic	AluSc|SINE|Alu	-34101	NM_001363676	10049	Hs.490745	NM_005494	ENSG00000105993	DNAJB6	DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1	DnaJ heat shock protein family (Hsp40) member B6	protein-coding
18.6667-5	chr14	51734579	51735007	+	0.0666667	NA	Intergenic	L1MEc|LINE|L1	17510	NM_001267047	122786	Hs.434914	NM_152330	ENSG00000139926	FRMD6	C14orf31|EX1|Willin|c14_5320	FERM domain containing 6	protein-coding
21.8333-13	chr6	5647064	5647679	+	0.0666667	NA	intron (NM_006567, intron 6 of 6)	intron (NM_006567, intron 6 of 6)	47901	NR_110842	101927950	Hs.571136	NR_110842	ENSG00000270174	LOC101927950	-	uncharacterized LOC101927950	ncRNA
18.6-17	chr6	88540316	88540819	+	0.0666667	NA	Intergenic	Intergenic	-1198	NR_110867	101928936	Hs.533080	NR_110867		LOC101928936	-	uncharacterized LOC101928936	ncRNA
21.0333-7	chr16	87748573	87749007	+	0.0666667	NA	non-coding (NR_147833, exon 5 of 12)	non-coding (NR_147833, exon 5 of 12)	17196	NM_017566	54758	Hs.123450	NM_017566	ENSG00000104731	KLHDC4	-	kelch domain containing 4	protein-coding
6.03333-2	chr16	75424869	75425024	+	0.0666667	NA	intron (NM_006324, intron 1 of 6)	L1ME1|LINE|L1	8557	NM_006324	10428	Hs.461361	NM_006324	ENSG00000153774	CFDP1	BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97	craniofacial development protein 1	protein-coding
18.9-11	chr4	66192878	66193274	+	0.0666667	NA	Intergenic	Intergenic	-83748	NR_031673	100302177		NR_031673	ENSG00000221563	MIR1269A	MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a	microRNA 1269a	ncRNA
8.23333-4	chr6	36998407	36998636	+	0.0666667	NA	Intergenic	Intergenic	-7134	NM_173558	221472	Hs.509664	NM_173558	ENSG00000146192	FGD2	ZFYVE4	FYVE, RhoGEF and PH domain containing 2	protein-coding
25.8-8	chr15	56916644	56917345	+	0.0666667	NA	intron (NR_015419, intron 2 of 3)	intron (NR_015419, intron 2 of 3)	-1096	NM_001322151	6938	Hs.511504	NM_003205	ENSG00000140262	TCF12	CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64	transcription factor 12	protein-coding
19.9667	chr1	229833788	229834107	+	0.0666667	NA	Intergenic	MER5A|DNA|hAT-Charlie	51871	NR_146476	101927504		NR_146473	ENSG00000227043	LINC01682	-	long intergenic non-protein coding RNA 1682	ncRNA
24.6-6	chr2	203339379	203339847	+	0.0666667	NA	intron (NM_001282932, intron 1 of 9)	L1MA9|LINE|L1	11219	NM_005759	10152	Hs.471156	NM_005759	ENSG00000138443	ABI2	ABI-2|ABI2B|AIP-1|AIP1|AblBP3|SSH3BP2|argBP1|argBPIA|argBPIB	abl interactor 2	protein-coding
5.2-5	chrX	129981127	129981223	+	0.0666667	NA	Intergenic	CpG	-24013	NM_021946	63035	Hs.496748	NM_021946	ENSG00000085185	BCORL1	BCoR-L1|CXorf10	BCL6 corepressor like 1	protein-coding
9-3	chr20	41041780	41041988	+	0.0666667	NA	intron (NM_003286, intron 2 of 20)	intron (NM_003286, intron 2 of 20)	13062	NM_003286	7150	Hs.472737	NM_003286	ENSG00000198900	TOP1	TOPI	DNA topoisomerase I	protein-coding
29.8-3	chr16	72677015	72677659	+	0.0666667	NA	Intergenic	L1MB4|LINE|L1	-12367	NR_159371	101927957	Hs.637253	NR_126330	ENSG00000261008	LINC01572	-	long intergenic non-protein coding RNA 1572	ncRNA
19.5667-8	chr20	61312192	61312743	+	0.0666667	NA	intron (NM_001794, intron 2 of 15)	intron (NM_001794, intron 2 of 15)	60206	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding
7.93334-2	chr20	60242790	60242913	+	0.0666667	NA	intron (NR_046099, intron 3 of 4)	intron (NR_046099, intron 3 of 4)	-65623	NR_030376	693231		NR_030376	ENSG00000207802	MIR646	MIRN646|hsa-mir-646	microRNA 646	ncRNA
24.5667-8	chr17	77685543	77686111	+	0.0666667	NA	Intergenic	Intergenic	42732	NR_104134	100132174	Hs.640110	NR_104134	ENSG00000267790	LINC01987	-	long intergenic non-protein coding RNA 1987	ncRNA
7.36667-2	chr14	64696648	64696782	+	0.0666667	NA	Intergenic	Intergenic	-7709	NM_001308147	26030	Hs.509637	NM_015549	ENSG00000126822	PLEKHG3	ARHGEF43|KIAA0599	pleckstrin homology and RhoGEF domain containing G3	protein-coding
21-6	chr22	23742486	23742888	+	0.0666667	NA	3' UTR (NM_021916, exon 2 of 2)	3' UTR (NM_021916, exon 2 of 2)	8425	NM_021916	7621	Hs.382874	NM_021916	ENSG00000187792	ZNF70	Cos17	zinc finger protein 70	protein-coding
23.4667	chr12	68950369	68950976	+	0.0666667	NA	intron (NM_001874, intron 1 of 8)	MLT2F|LTR|ERVL	12568	NM_001874	1368	Hs.654387	NM_001874	ENSG00000135678	CPM	-	carboxypeptidase M	protein-coding
23.5-3	chr11	14559458	14560008	+	0.0666667	NA	intron (NM_148976, intron 2 of 10)	intron (NM_148976, intron 2 of 10)	-39288	NM_001143937	5682	Hs.102798	NM_002786	ENSG00000129084	PSMA1	HC2|HEL-S-275|NU|PROS30	proteasome subunit alpha 1	protein-coding
26.3-7	chr5	16475237	16475795	+	0.0666667	NA	intron (NM_019000, intron 6 of 6)	intron (NM_019000, intron 6 of 6)	-9716	NM_033414	90441	Hs.60300	NM_033414	ENSG00000173545	ZNF622	ZPR9	zinc finger protein 622	protein-coding
25.1333-13	chr6	132624184	132624672	+	0.0666667	NA	promoter-TSS (NM_001033080)	promoter-TSS (NM_001033080)	-153	NM_001033080	9287	Hs.272382	NM_014626	ENSG00000146378	TAAR2	GPR58|taR-2	trace amine associated receptor 2 (gene/pseudogene)	protein-coding
22.9667-2	chr10	34960535	34960961	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	113535	NM_001198778	8453	Hs.82919	NM_003591	ENSG00000108094	CUL2	-	cullin 2	protein-coding
13.1667-8	chr4	163385747	163385992	+	0.0666667	NA	Intergenic	MER41B|LTR|ERV1	41767	NM_001317091	4889	Hs.519058	NM_006174	ENSG00000164129	NPY5R	NPY5-R|NPYR5|NPYY5-R	neuropeptide Y receptor Y5	protein-coding
18-15	chr5	133651392	133651730	+	0.0666667	NA	Intergenic	L1MC1|LINE|L1	-39020	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding
4.23334	chr3	6181227	6181290	+	0.0666667	NA	Intergenic	Intergenic	624191	NR_110125	101927347	Hs.333345	NR_110123	ENSG00000226258	GRM7-AS3	-	GRM7 antisense RNA 3	ncRNA
8.3-2	chr11	104955464	104955590	+	0.0666667	NA	intron (NM_001225, intron 1 of 8)	intron (NM_001225, intron 1 of 8)	13047	NM_001225	837	Hs.138378	NM_001225	ENSG00000196954	CASP4	ICE(rel)II|ICEREL-II|ICH-2|Mih1|Mih1/TX|TX	caspase 4	protein-coding
29.1667-3	chr15	76156198	76156830	+	0.0666667	NA	intron (NM_152335, intron 3 of 10)	intron (NM_152335, intron 3 of 10)	24972	NR_120360	101929439	Hs.631721	NR_120360	ENSG00000259422	LOC101929439	-	uncharacterized LOC101929439	ncRNA
12.1667-7	chr8	69999950	70000231	+	0.0666667	NA	Intergenic	Intergenic	71162	NM_024504	63978	Hs.736037	NM_024504	ENSG00000147596	PRDM14	PFM11	PR/SET domain 14	protein-coding
16.4667-2	chr10	70717631	70717975	+	0.0666667	NA	intron (NM_080722, intron 4 of 21)	intron (NM_080722, intron 4 of 21)	45297	NM_080722	140766	Hs.352156	NM_080722	ENSG00000138316	ADAMTS14	-	ADAM metallopeptidase with thrombospondin type 1 motif 14	protein-coding
28.6667-9	chr5	31344371	31344847	+	0.0666667	NA	Intergenic	L2b|LINE|L2	150923	NM_001362435	1004	Hs.124776	NM_004932	ENSG00000113361	CDH6	CAD6|KCAD	cadherin 6	protein-coding
20.5333-3	chr10	22541492	22542096	+	0.0666667	NA	intron (NM_005028, intron 8 of 9)	intron (NM_005028, intron 8 of 9)	-103865	NR_036533	100499489	Hs.7444	NR_036533		LOC100499489	-	uncharacterized LOC100499489	ncRNA
16.8667-2	chr1	155080973	155081329	+	0.0666667	NA	intron (NM_004952, intron 1 of 4)	CpG	2314	NM_004952	1944	Hs.516656	NM_004952	ENSG00000143590	EFNA3	EFL2|EPLG3|Ehk1-L|LERK3	ephrin A3	protein-coding
26.6333-8	chr3	170013121	170013908	+	0.0666667	NA	Intergenic	Tigger3b|DNA|TcMar-Tigger	-24481	NM_014373	26996	Hs.231320	NM_014373	ENSG00000173890	GPR160	GPCR1|GPCR150	G protein-coupled receptor 160	protein-coding
18.7333-3	chr10	95635584	95635898	+	0.0666667	NA	intron (NM_001323419, intron 2 of 14)	intron (NM_001323419, intron 2 of 14)	20970	NM_002860	5832	Hs.500645	NM_002860	ENSG00000059573	ALDH18A1	ADCL3|ARCL3A|GSAS|P5CS|PYCS|SPG9|SPG9A|SPG9B	aldehyde dehydrogenase 18 family member A1	protein-coding
13.8333-6	chr4	61965987	61966366	+	0.0666667	NA	intron (NM_001371343, intron 16 of 23)	intron (NM_001371343, intron 16 of 23)	195589	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
18	chr1	59319719	59320128	+	0.0666667	NA	intron (NR_103473, intron 2 of 16)	intron (NR_103473, intron 2 of 16)	9891	NM_001350794	55277	Hs.444301	NM_018291	ENSG00000172456	FGGY	-	FGGY carbohydrate kinase domain containing	protein-coding
14.3333-10	chr8	137306300	137306650	+	0.0666667	NA	Intergenic	L1ME1|LINE|L1	107113	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
20.5667-8	chr21	44563862	44564406	+	0.0666667	NA	intron (NM_144991, intron 2 of 11)	Tigger17a|DNA|TcMar-Tigger	-5339	NM_198696	386682	Hs.688630	NM_198696	ENSG00000212935	KRTAP10-3	KAP10.3|KAP18-3|KAP18.3|KRTAP10.3|KRTAP18-3|KRTAP18.3	keratin associated protein 10-3	protein-coding
11.2-4	chr6	37945402	37945704	+	0.0666667	NA	intron (NM_021943, intron 2 of 5)	AluSz6|SINE|Alu	125826	NM_021943	60685	Hs.36959	NM_021943	ENSG00000156639	ZFAND3	TEX27	zinc finger AN1-type containing 3	protein-coding
12.0333-3	chr3	152606168	152606442	+	0.0666667	NA	Intergenic	Charlie8|DNA|hAT-Charlie	-228826	NM_002563	5028	Hs.79881	NM_002563	ENSG00000169860	P2RY1	P2Y1|SARCC	purinergic receptor P2Y1	protein-coding
10.5-7	chr7	66641334	66641582	+	0.0666667	NA	3' UTR (NM_153033, exon 4 of 4)	3' UTR (NM_153033, exon 4 of 4)	12577	NM_001167961	154881	Hs.546627	NM_153033	ENSG00000243335	KCTD7	CLN14|EPM3	potassium channel tetramerization domain containing 7	protein-coding
30.6333-10	chr7	4048039	4048736	+	0.0666667	NA	intron (NM_152744, intron 17 of 44)	intron (NM_152744, intron 17 of 44)	-81298	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
15.3667-3	chr11	25970485	25970842	+	0.0666667	NA	Intergenic	Intergenic	-218460	NM_001313726	63982	Hs.91791	NM_031418	ENSG00000134343	ANO3	C11orf25|DYT23|DYT24|GENX-3947|TMEM16C	anoctamin 3	protein-coding
27.0667-15	chr8	124048501	124049174	+	0.0666667	NA	intron (NR_103547, intron 3 of 4)	MIRb|SINE|MIR	-8055	NR_040044	439941	Hs.683919	NM_001038706	ENSG00000181171	FER1L6-AS1	C8orf54	FER1L6 antisense RNA 1	ncRNA
14.8-5	chr12	90799711	90799976	+	0.0666667	NA	Intergenic	Intergenic	-118180	NR_038868	439916	Hs.350600	NM_001039384	ENSG00000196243	LINC00615	C12orf37	long intergenic non-protein coding RNA 615	ncRNA
27.8333-4	chr2	208501807	208502452	+	0.0666667	NA	Intergenic	Intergenic	-40513	NR_136588	101927960	Hs.159960	NR_136588		LOC101927960	-	uncharacterized LOC101927960	ncRNA
18.6667-13	chr6	161549818	161550290	+	0.0666667	NA	intron (NM_004562, intron 8 of 11)	L2a|LINE|L2	79077	NR_134594	105378098	Hs.691066	NR_134593		LOC105378098	-	uncharacterized LOC105378098	ncRNA
9.8-3	chr19	19328138	19328355	+	0.0666667	NA	intron (NM_015329, intron 1 of 18)	intron (NM_015329, intron 1 of 18)	7417	NM_015329	23383	Hs.654939	NM_015329	ENSG00000129933	MAU2	KIAA0892|MAU2L|SCC4|mau-2	MAU2 sister chromatid cohesion factor	protein-coding
18.8667-7	chr14	104843833	104844117	+	0.0666667	NA	Intergenic	CpG	-21293	NM_001112726	283638	Hs.533721	NM_015005	ENSG00000099814	CEP170B	CEP170R|FAM68C|KIAA0284	centrosomal protein 170B	protein-coding
10.3-3	chr1	246654872	246655124	+	0.0666667	NA	intron (NM_152609, intron 9 of 10)	L2a|LINE|L2	-69411	NM_016002	51097	Hs.498397	NM_016002	ENSG00000143653	SCCPDH	CGI-49|NET11	saccharopine dehydrogenase (putative)	protein-coding
29.1667-10	chr3	46692727	46693284	+	0.0666667	NA	promoter-TSS (NM_001370524)	promoter-TSS (NM_001370524)	674	NM_147129	259173	Hs.517937	NM_147129	ENSG00000178038	ALS2CL	RN49018	ALS2 C-terminal like	protein-coding
17.5333	chr10	47108372	47108803	+	0.0666667	NA	Intergenic	Intergenic	-191610	NM_004962	2662	Hs.2171	NM_004962	ENSG00000266524	GDF10	BIP|BMP-3b|BMP3B	growth differentiation factor 10	protein-coding
24.2667-8	chr20	17172068	17172700	+	0.0666667	NA	Intergenic	Intergenic	-53723	NM_001201528	5126	Hs.315186	NM_002594	ENSG00000125851	PCSK2	NEC 2|NEC-2|NEC2|PC2|SPC2	proprotein convertase subtilisin/kexin type 2	protein-coding
25.7667-3	chr16	70692097	70692747	+	0.0666667	NA	intron (NM_001351157, intron 17 of 17)	intron (NM_001351157, intron 17 of 17)	-6369	NM_138383	92154	Hs.432387	NM_138383	ENSG00000132613	MTSS2	ABBA|ABBA-1|ABBA1|MTSS1L	MTSS I-BAR domain containing 2	protein-coding
19.5333-9	chr3	169223969	169224455	+	0.0666667	NA	intron (NM_001205194, intron 1 of 15)	intron (NM_001205194, intron 1 of 15)	-76741	NM_001366470	2122	Hs.656395	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding
20.6667-14	chr4	165455650	165456209	+	0.0666667	NA	intron (NM_001873, intron 1 of 8)	AluSx1|SINE|Alu	69687	NR_030304	693163		NR_030304	ENSG00000207559	MIR578	MIRN578|hsa-mir-578	microRNA 578	ncRNA
26.5-11	chr7	133531026	133531576	+	0.0666667	NA	intron (NM_021807, intron 9 of 17)	intron (NM_021807, intron 9 of 17)	240420	NR_106749	102465139		NR_106749	ENSG00000276137	MIR6133	hsa-mir-6133	microRNA 6133	ncRNA
20.8-19	chr7	39265396	39265818	+	0.0666667	NA	intron (NM_001370959, intron 4 of 9)	intron (NM_001370959, intron 4 of 9)	63527	NR_145730	109616963		NR_145730	ENSG00000206947	SNORA20B	-	small nucleolar RNA, H/ACA box 20B	snoRNA
26.6667-7	chr2	86560931	86561507	+	0.0666667	NA	intron (NM_001198954, intron 3 of 7)	MIR|SINE|MIR	2224	NR_036454	51652	Hs.591582	NM_016079	ENSG00000115561	CHMP3	CGI-149|NEDF|VPS24	charged multivesicular body protein 3	protein-coding
9.3	chr10	98476662	98476801	+	0.0666667	NA	intron (NM_001166246, intron 11 of 12)	AluSx|SINE|Alu	-29768	NM_001322479	3257	Hs.404568	NM_000195	ENSG00000107521	HPS1	BLOC3S1|HPS	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1	protein-coding
16.8667-13	chr5	144782057	144782387	+	0.0666667	NA	Intergenic	Intergenic	576831	NM_001370486	57528	Hs.7093	NM_020768	ENSG00000183775	KCTD16	-	potassium channel tetramerization domain containing 16	protein-coding
31.0667	chr1	117610564	117611080	+	0.0666667	NA	intron (NM_017709, intron 1 of 1)	AluSc|SINE|Alu	4774	NM_017709	54855	Hs.356216	NM_017709	ENSG00000183508	TENT5C	FAM46C	terminal nucleotidyltransferase 5C	protein-coding
21.3667	chr1	13490624	13491212	+	0.0666667	NA	intron (NM_001010847, intron 1 of 1)	intron (NM_001010847, intron 1 of 1)	23085	NM_001010847	126755	Hs.657356	NM_001010847	ENSG00000162494	LRRC38	-	leucine rich repeat containing 38	protein-coding
19.1333-12	chr7	46256455	46256883	+	0.0666667	NA	Intergenic	L1MDa|LINE|L1	-335397	NM_001013398	3486	Hs.450230	NM_000598	ENSG00000146674	IGFBP3	BP-53|IBP3	insulin like growth factor binding protein 3	protein-coding
8.86667	chr14	79331732	79331865	+	0.0666667	NA	intron (NM_001105250, intron 1 of 6)	intron (NM_001105250, intron 1 of 6)	52418	NM_138970	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
15.0667-4	chr11	15707193	15707497	+	0.0666667	NA	Intergenic	Intergenic	63460	NM_001293172	102724957	Hs.512245	NM_001293172		LOC102724957	-	uncharacterized LOC102724957	protein-coding
26.3333-10	chr7	70686225	70686679	+	0.0666667	NA	intron (NM_015570, intron 5 of 18)	MIR|SINE|MIR	-445692	NM_022479	64409	Hs.488591	NM_022479	ENSG00000185274	GALNT17	GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17	polypeptide N-acetylgalactosaminyltransferase 17	protein-coding
20.7667-5	chr2	156548089	156548461	+	0.0666667	NA	intron (NM_000408, intron 6 of 16)	intron (NM_000408, intron 6 of 16)	111896	NM_000408	2820	Hs.512382	NM_000408	ENSG00000115159	GPD2	GDH2|GPDM|mGPDH	glycerol-3-phosphate dehydrogenase 2	protein-coding
9.89999	chr6	80608331	80608603	+	0.0666667	NA	Intergenic	Intergenic	501796	NM_183050	594	Hs.156414	NM_000056	ENSG00000083123	BCKDHB	BCKDE1B|BCKDH E1-beta|E1B	branched chain keto acid dehydrogenase E1 subunit beta	protein-coding
10.9333	chr1	92902219	92902478	+	0.0666667	NA	intron (NM_001006605, intron 1 of 4)	L1MA5|LINE|L1	-25198	NM_001252271	388650	Hs.180946	NM_001006605	ENSG00000154511	DIPK1A	FAM69A	divergent protein kinase domain 1A	protein-coding
23.5-7	chr15	101551422	101551847	+	0.0666667	NA	Intergenic	Intergenic	-61650	NM_138319	5046	Hs.498494	NM_002570	ENSG00000140479	PCSK6	PACE4|SPC4	proprotein convertase subtilisin/kexin type 6	protein-coding
27.5333-16	chr8	101585277	101586007	+	0.0666667	NA	intron (NM_024915, intron 7 of 15)	intron (NM_024915, intron 7 of 15)	93203	NM_001330593	79977	Hs.661088	NM_024915	ENSG00000083307	GRHL2	BOM|DFNA28|ECTDS|PPCD4|TFCP2L3	grainyhead like transcription factor 2	protein-coding
9.96667-3	chr3	157241574	157241724	+	0.0666667	NA	Intergenic	L1ME2|LINE|L1	-80889	NM_001308185	57018	Hs.4859	NM_020307	ENSG00000163660	CCNL1	ANIA6A|BM-001|PRO1073|ania-6a	cyclin L1	protein-coding
20.1667-12	chr4	74625579	74625990	+	0.0666667	NA	Intergenic	Intergenic	168739	NM_001729	685	Hs.591704	NM_001729	ENSG00000174808	BTC	-	betacellulin	protein-coding
20.8666-4	chr19	34827120	34827738	+	0.0666667	NA	intron (NR_033982, intron 4 of 5)	intron (NR_033982, intron 4 of 5)	5440	NR_033982	400685	Hs.730118	NR_033982	ENSG00000267767	LINC01801	-	long intergenic non-protein coding RNA 1801	ncRNA
12.9-5	chr2	107699032	107699338	+	0.0666667	NA	Intergenic	Intergenic	-54927	NR_126370	104326057	Hs.585967	NR_126369	ENSG00000232991	GACAT1	LINC00876	gastric cancer associated transcript 1	ncRNA
24.7333-7	chr17	78765942	78766518	+	0.0666667	NA	intron (NM_004762, intron 1 of 12)	intron (NM_004762, intron 1 of 12)	15978	NM_001365039	9267	Hs.191215	NM_004762	ENSG00000108669	CYTH1	B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7	cytohesin 1	protein-coding
21.5667-8	chr3	26007030	26007485	+	0.0666667	NA	Intergenic	L1MC|LINE|L1	-133562	NR_034055	285326	Hs.145246	NR_034055	ENSG00000230891	LINC00692	-	long intergenic non-protein coding RNA 692	ncRNA
18.6-2	chr10	21419253	21419743	+	0.0666667	NA	Intergenic	AluJo|SINE|Alu	-46548	NR_155751	105376444	Hs.638243	NR_155751		LINC02643	-	long intergenic non-protein coding RNA 2643	ncRNA
26.8667-7	chr20	59938056	59938632	+	0.0666667	NA	3' UTR (NM_006242, exon 1 of 1)	3' UTR (NM_006242, exon 1 of 1)	1961	NM_006242	5509	Hs.42215	NM_006242	ENSG00000132825	PPP1R3D	PPP1R6	protein phosphatase 1 regulatory subunit 3D	protein-coding
22.8666-2	chr1	88285687	88286315	+	0.0666667	NA	Intergenic	Intergenic	-398143	NM_001320707	5586	Hs.440833	NM_006256	ENSG00000065243	PKN2	PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7	protein kinase N2	protein-coding
42.9667	chr1	125177055	125177935	+	0.0666667	NA	Intergenic	Intergenic	3658383	NR_003955	647121	Hs.697682	NR_003955	ENSG00000231752	EMBP1	-	embigin pseudogene 1	pseudo
18.2333-12	chr5	148686870	148687319	+	0.0666667	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	-32567	NM_000870	3360	Hs.483773	NM_000870	ENSG00000164270	HTR4	5-HT4|5-HT4R	5-hydroxytryptamine receptor 4	protein-coding
17.1-16	chr5	62914873	62915236	+	0.0666667	NA	Intergenic	Intergenic	336235	NM_181506	100130733	Hs.721348	NM_181506	ENSG00000186105	LRRC70	SLRN	leucine rich repeat containing 70	protein-coding
11.1	chr15	62981068	62981332	+	0.0666667	NA	Intergenic	L2|LINE|L2	-61547	NM_001365777	7168	Hs.133892	NM_000366	ENSG00000140416	TPM1	C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA	tropomyosin 1	protein-coding
10.3-2	chr1	70432288	70432555	+	0.0666667	NA	intron (NM_001902, intron 8 of 11)	L2b|LINE|L2	21153	NM_001902	1491	Hs.19904	NM_001902	ENSG00000116761	CTH	-	cystathionine gamma-lyase	protein-coding
15.3667	chr1	77124150	77124588	+	0.0666667	NA	intron (NM_005482, intron 9 of 10)	AluSz|SINE|Alu	64226	NR_106978	102466995		NR_106978	ENSG00000276081	MIR7156	hsa-mir-7156	microRNA 7156	ncRNA
21.4667-8	chr2	232870142	232870698	+	0.0666667	NA	intron (NM_001346122, intron 2 of 3)	intron (NM_001346122, intron 2 of 3)	334	NM_206895	389084	Hs.657509	NM_206895	ENSG00000182600	SNORC	ASCL830|C2orf82|UNQ830	secondary ossification center associated regulator of chondrocyte maturation	protein-coding
14.5333-10	chr7	123685452	123685829	+	0.0666667	NA	intron (NM_003941, intron 10 of 10)	L2a|LINE|L2	29774	NM_207163	442721	Hs.592260	NM_207163	ENSG00000170807	LMOD2	C-LMOD|CLMOD	leiomodin 2	protein-coding
6.26667	chr12	45361343	45361474	+	0.0666667	NA	intron (NM_001025356, intron 8 of 19)	L1MB7|LINE|L1	68718	NM_001142678	196527	Hs.505339	NM_001025356	ENSG00000177119	ANO6	BDPLT7|SCTS|TMEM16F	anoctamin 6	protein-coding
4.56667	chr12	23785439	23785507	+	0.0666667	NA	intron (NM_152989, intron 6 of 17)	intron (NM_152989, intron 6 of 17)	164197	NM_001330785	6660	Hs.434948	NM_006940	ENSG00000134532	SOX5	L-SOX5|L-SOX5B|L-SOX5F|LAMSHF	SRY-box transcription factor 5	protein-coding
10.1333-7	chr9	129965265	129965506	+	0.0666667	NA	intron (NM_001363755, intron 4 of 15)	intron (NM_001363755, intron 4 of 15)	77804	NM_015033	23048	Hs.189409	NM_015033	ENSG00000187239	FNBP1	FBP17	formin binding protein 1	protein-coding
13.9667-6	chr3	146545385	146545789	+	0.0666667	NA	promoter-TSS (NM_021105)	promoter-TSS (NM_021105)	-980	NM_021105	5359	Hs.130759	NM_021105	ENSG00000188313	PLSCR1	MMTRA1B	phospholipid scramblase 1	protein-coding
10.0667-6	chr2	23417751	23417968	+	0.0666667	NA	intron (NM_052920, intron 1 of 13)	L2a|LINE|L2	32680	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding
10.2667-4	chr2	3246076	3246306	+	0.0666667	NA	intron (NM_001330531, intron 3 of 7)	intron (NM_001330531, intron 3 of 7)	-120165	NR_110228	101927554	Hs.638446	NR_110228	ENSG00000234423	LINC01250	-	long intergenic non-protein coding RNA 1250	ncRNA
11.2333-4	chr12	117978571	117978896	+	0.0666667	NA	Intergenic	MLT1K|LTR|ERVL-MaLR	-9743	NM_173598	283455	Hs.375836	NM_173598	ENSG00000171435	KSR2	-	kinase suppressor of ras 2	protein-coding
16.6667-5	chr16	84410479	84410777	+	0.0666667	NA	intron (NM_001291454, intron 3 of 23)	intron (NM_001291454, intron 3 of 23)	4040	NM_001291454	9914	Hs.6168	NM_014861	ENSG00000064270	ATP2C2	SPCA2	ATPase secretory pathway Ca2+ transporting 2	protein-coding
3.83334	chr11	38047667	38047725	+	0.0666667	NA	Intergenic	Intergenic	109095	NR_135110	105376633	Hs.135690	NR_135110	ENSG00000254516	LINC02760	-	long intergenic non-protein coding RNA 2760	ncRNA
4	chr12	69546176	69546262	+	0.0666667	NA	intron (NM_001278351, intron 5 of 10)	L1MB2|LINE|L1	30779	NR_145803	109623461		NR_145803		SNORA113	-	small nucleolar RNA, H/ACA box 113	snoRNA
10.7667-7	chr4	67055347	67055508	+	0.0666667	NA	Intergenic	Intergenic	366573	NR_110747	101927237	Hs.435644	NR_110747	ENSG00000250075	LOC101927237	-	uncharacterized LOC101927237	ncRNA
15.5667-3	chr17	71192767	71193189	+	0.0666667	NA	intron (NR_104152, intron 1 of 3)	intron (NR_104152, intron 1 of 3)	9201	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility 17	ncRNA
19.3-7	chr20	8767882	8768393	+	0.0666667	NA	intron (NM_182734, intron 26 of 32)	AluSg|SINE|Alu	-63048	NR_004386	26767		NR_004386	ENSG00000201348	RNU105B	105B|E1-2	RNA, U105B small nucleolar	snoRNA
22.2333-5	chr14	72697837	72698277	+	0.0666667	NA	intron (NM_001280544, intron 6 of 9)	L2b|LINE|L2	181237	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA
23.4666-2	chr4	113774482	113775147	+	0.0666667	NA	Intergenic	Intergenic	-12887	NM_172127	817	Hs.144114	NM_001221	ENSG00000145349	CAMK2D	CAMKD	calcium/calmodulin dependent protein kinase II delta	protein-coding
13.4333-9	chr7	23903175	23903455	+	0.0666667	NA	Intergenic	Intergenic	193096	NM_032944	56164	Hs.309767	NM_031414	ENSG00000196335	STK31	SGK396|TDRD8	serine/threonine kinase 31	protein-coding
14.4667-4	chr3	125534135	125534526	+	0.0666667	NA	intron (NM_022776, intron 11 of 12)	AluSz|SINE|Alu	-14128	NM_003794	8723	Hs.507243	NM_003794	ENSG00000114520	SNX4	ATG24B	sorting nexin 4	protein-coding
7.76667-2	chr2	179068143	179068298	+	0.0666667	NA	Intergenic	L2a|LINE|L2	-18083	NM_173648	285025	Hs.324341	NM_173648	ENSG00000163492	CCDC141	CAMDI	coiled-coil domain containing 141	protein-coding
26.0333-3	chr10	87988999	87989760	+	0.0666667	NA	Intergenic	MLT2D|LTR|ERVL	125754	NM_000314	5728	Hs.500466	NM_000314	ENSG00000171862	PTEN	10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1	phosphatase and tensin homolog	protein-coding
17.5-6	chr18	5071354	5071781	+	0.0666667	NA	Intergenic	Intergenic	-9615	NR_146900	105371969	Hs.599709	NR_146900		LINC01892	-	long intergenic non-protein coding RNA 1892	ncRNA
16.2-14	chr4	28926945	28927355	+	0.0666667	NA	Intergenic	Intergenic	-69634	NR_146499	102723764		NR_146499		LINC02364	-	long intergenic non-protein coding RNA 2364	ncRNA
8.86666-2	chr2	144092407	144092627	+	0.0666667	NA	intron (NM_001354355, intron 7 of 13)	L1ME1|LINE|L1	119062	NM_001284233	79712	Hs.44780	NM_024659	ENSG00000121964	GTDC1	Hmat-Xa|mat-Xa	glycosyltransferase like domain containing 1	protein-coding
22.0666-3	chr20	43550835	43551444	+	0.0666667	NA	Intergenic	CR1_Mam|LINE|CR1	-7888	NM_170693	10110	Hs.300863	NM_016276	ENSG00000101049	SGK2	H-SGK2|dJ138B7.2	serum/glucocorticoid regulated kinase 2	protein-coding
9.63334	chr12	110332004	110332167	+	0.0666667	NA	intron (NM_170665, intron 8 of 19)	intron (NM_170665, intron 8 of 19)	50838	NM_001681	488	Hs.506759	NM_001681	ENSG00000174437	ATP2A2	ATP2B|DAR|DD|SERCA2	ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2	protein-coding
12.6667-6	chr3	40457985	40458244	+	0.0666667	NA	intron (NM_003973, intron 2 of 5)	intron (NM_003973, intron 2 of 5)	775	NM_001034996	9045	Hs.446522	NM_003973	ENSG00000188846	RPL14	CAG-ISL-7|CTG-B33|L14|RL14|hRL14	ribosomal protein L14	protein-coding
12.6333	chr1	216213536	216213813	+	0.0666667	NA	intron (NM_206933, intron 15 of 71)	L1ME1|LINE|L1	141209	NR_125992	102723833	Hs.232072	NR_125992	ENSG00000233620	LOC102723833	-	uncharacterized LOC102723833	ncRNA
34.3333-5	chr2	223137006	223137771	+	0.0666667	NA	Intergenic	L1ME3D|LINE|L1	85458	NM_080671	23704	Hs.348522	NM_080671	ENSG00000152049	KCNE4	MIRP3	potassium voltage-gated channel subfamily E regulatory subunit 4	protein-coding
25.1667-2	chr3	40250683	40251349	+	0.0666667	NA	intron (NM_001284424, intron 14 of 15)	LTR16C|LTR|ERVL	58682	NR_033965	440952	Hs.660388	NR_033965	ENSG00000280739	EIF1B-AS1	-	EIF1B antisense RNA 1	ncRNA
7.19999	chr2	72080314	72080520	+	0.0666667	NA	Intergenic	MER52A|LTR|ERV1	67445	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding
30.0667-9	chr5	27652433	27653049	+	0.0666667	NA	Intergenic	THE1C-int|LTR|ERVL-MaLR	180449	NR_038848	643401	Hs.533212	NR_038848	ENSG00000250337	PURPL	LINC01021	p53 upregulated regulator of p53 levels	ncRNA
24.0667-2	chr10	22102464	22103083	+	0.0666667	NA	Intergenic	Intergenic	-99043	NM_022365	64215	Hs.499000	NM_022365	ENSG00000136770	DNAJC1	DNAJL1|ERdj1|HTJ1|MTJ1	DnaJ heat shock protein family (Hsp40) member C1	protein-coding
26.4333-9	chr20	320541	321271	+	0.0666667	NA	intron (NR_109990, intron 2 of 2)	MLT1F1|LTR|ERVL-MaLR	4346	NR_109990	100507459	Hs.659689	NR_109990		NRSN2-AS1	-	NRSN2 antisense RNA 1	ncRNA
29.1333	chr1	37157488	37158185	+	0.0666667	NA	Intergenic	Intergenic	-3727	NR_036217	100422898		NR_036217	ENSG00000264698	MIR4255	-	microRNA 4255	ncRNA
9.76666-3	chr6	17087872	17088144	+	0.0666667	NA	Intergenic	Intergenic	-14250	NM_001190766	401236	Hs.677399	NM_001190766	ENSG00000230873	STMND1	-	stathmin domain containing 1	protein-coding
6.3-3	chr5	57225783	57225877	+	0.0666667	NA	intron (NM_001127236, intron 2 of 10)	HERVL40-int|LTR|ERVL	11756	NM_001127236	65056	Hs.444279	NM_022913	ENSG00000062194	GPBP1	GPBP|SSH6|VASCULIN	GC-rich promoter binding protein 1	protein-coding
17.0667-4	chr15	57133468	57133856	+	0.0666667	NA	intron (NM_207038, intron 5 of 19)	intron (NM_207038, intron 5 of 19)	-85768	NM_207040	6938	Hs.511504	NM_003205	ENSG00000140262	TCF12	CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64	transcription factor 12	protein-coding
23.6-8	chr2	123818556	123819202	+	0.0666667	NA	Intergenic	MER4D|LTR|ERV1	206295	NR_147976	107985820	Hs.637705	NR_147976		LOC107985820	-	uncharacterized LOC107985820	ncRNA
6.86667	chr11	82534083	82534230	+	0.0666667	NA	Intergenic	Intergenic	-130243	NR_120571	101928989	Hs.145117	NR_120571	ENSG00000245832	MIR4300HG	-	MIR4300 host gene	ncRNA
18.9667-9	chr5	94143441	94143811	+	0.0666667	NA	Intergenic	L1MA4A|LINE|L1	-31927	NM_001163417	83989	Hs.600086	NM_032042	ENSG00000113391	FAM172A	C5orf21|Toupee	family with sequence similarity 172 member A	protein-coding
33.1333-4	chr2	48660541	48661130	+	0.0666667	NA	intron (NM_172311, intron 8 of 10)	AluSz6|SINE|Alu	42979	NM_006872	11036	Hs.732016	NM_006872	ENSG00000242441	GTF2A1L	ALF	general transcription factor IIA subunit 1 like	protein-coding
21.2333-13	chr8	93377035	93377503	+	0.0666667	NA	intron (NR_033858, intron 9 of 10)	intron (NR_033858, intron 9 of 10)	-210419	NR_161372	389676	Hs.386711	NR_161372		C8orf87	-	chromosome 8 open reading frame 87	ncRNA
19.7667-5	chr22	17963939	17964400	+	0.0666667	NA	intron (NM_015241, intron 1 of 31)	intron (NM_015241, intron 1 of 31)	16792	NR_030378	693233		NR_030378	ENSG00000207780	MIR648	MIRN648|hsa-mir-648	microRNA 648	ncRNA
7.99999	chr8	4221475	4221697	+	0.0666667	NA	intron (NM_033225, intron 3 of 69)	HAL1|LINE|L1	773328	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding
37.8333-2	chr10	49651215	49652086	+	0.0666667	NA	intron (NM_001142929, intron 10 of 14)	intron (NM_001142929, intron 10 of 14)	-28001	NM_182554	282966	Hs.131287	NM_182554	ENSG00000178645	C10orf53	-	chromosome 10 open reading frame 53	protein-coding
14.1333-6	chr14	53103714	53104070	+	0.0666667	NA	intron (NM_030637, intron 1 of 11)	intron (NM_030637, intron 1 of 11)	49431	NM_001160147	80821	Hs.125525	NM_030637	ENSG00000100523	DDHD1	PA-PLA1|PAPLA1|SPG28	DDHD domain containing 1	protein-coding
14.4-8	chr15	81257004	81257351	+	0.0666667	NA	intron (NM_001352686, intron 2 of 18)	intron (NM_001352686, intron 2 of 18)	-39793	NM_004513	3603	Hs.459095	NM_004513	ENSG00000172349	IL16	LCF|NIL16|PRIL16|prIL-16	interleukin 16	protein-coding
17.9667-6	chr3	15222173	15222684	+	0.0666667	NA	intron (NM_014296, intron 5 of 20)	intron (NM_014296, intron 5 of 20)	16182	NM_014296	23473	Hs.595234	NM_014296	ENSG00000131375	CAPN7	CALPAIN7|PALBH	calpain 7	protein-coding
22.5333-5	chr11	106772185	106772852	+	0.0666667	NA	intron (NM_001256424, intron 6 of 8)	intron (NM_001256424, intron 6 of 8)	245958	NM_000855	2977	Hs.24321	NM_000855	ENSG00000152402	GUCY1A2	GC-SA2|GUC1A2	guanylate cyclase 1 soluble subunit alpha 2	protein-coding
14.7333-2	chr12	3434795	3435049	+	0.0666667	NA	intron (NM_001256536, intron 1 of 9)	intron (NM_001256536, intron 1 of 9)	53573	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding
27-9	chr15	53023350	53024031	+	0.0666667	NA	Intergenic	L1ME3B|LINE|L1	-92675	NR_147181	105370822	Hs.527821	NR_147181	ENSG00000259237	LINC02490	-	long intergenic non-protein coding RNA 2490	ncRNA
11.6-10	chr8	26722359	26722642	+	0.0666667	NA	Intergenic	L1MD2|LINE|L1	143155	NM_001322504	148	Hs.52931	NM_000680	ENSG00000120907	ADRA1A	ADRA1C|ADRA1L1|ALPHA1AAR	adrenoceptor alpha 1A	protein-coding
31.6333-4	chr13	67283135	67283884	+	0.0666667	NA	Intergenic	Intergenic	-53173	NM_020403	5101	Hs.654709	NM_020403	ENSG00000184226	PCDH9	-	protocadherin 9	protein-coding
31.2-19	chr9	27267832	27268700	+	0.0666667	NA	intron (NR_026679, intron 10 of 16)	intron (NR_026679, intron 10 of 16)	14527	NR_026679	158035	Hs.201554	NR_026679	ENSG00000283945	LINC00032	C9orf14|NCRNA00032	long intergenic non-protein coding RNA 32	ncRNA
23.8333-2	chr2	236250137	236250685	+	0.0666667	NA	intron (NM_212556, intron 1 of 5)	intron (NM_212556, intron 1 of 5)	13934	NM_212556	401036	Hs.639909	NM_212556	ENSG00000182177	ASB18	ASB-18	ankyrin repeat and SOCS box containing 18	protein-coding
7.96667-4	chr9	27314328	27314463	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	-17245	NM_020641	54586	Hs.163070	NM_020641	ENSG00000120160	EQTN	AFAF|C9orf11|SPACA8	equatorin	protein-coding
32.3667-8	chr7	53241873	53242668	+	0.0666667	NA	Intergenic	L1MEg|LINE|L1	206637	NM_182595	285877	Hs.381970	NM_182595	ENSG00000221900	POM121L12	-	POM121 transmembrane nucleoporin like 12	protein-coding
25.3-9	chr22	23199602	23200306	+	0.0666667	NA	intron (NM_004327, intron 1 of 22)	AluY|SINE|Alu	19445	NM_021574	613	Hs.517461	NM_004327	ENSG00000186716	BCR	ALL|BCR1|CML|D22S11|D22S662|PHL	BCR activator of RhoGEF and GTPase	protein-coding
20.9667-14	chr6	51119449	51119892	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	300799	NM_003221	7021	Hs.33102	NM_003221	ENSG00000008196	TFAP2B	AP-2B|AP2-B|PDA2	transcription factor AP-2 beta	protein-coding
18.3333-10	chr4	30283957	30284409	+	0.0666667	NA	Intergenic	Intergenic	-436186	NM_032457	5099	Hs.479439	NM_002589	ENSG00000169851	PCDH7	BH-Pcdh|BHPCDH|PPP1R120	protocadherin 7	protein-coding
17.0333-6	chr4	107152740	107153089	+	0.0666667	NA	Intergenic	LTR50|LTR|ERVL	-116601	NM_014421	27123	Hs.211869	NM_014421	ENSG00000155011	DKK2	DKK-2	dickkopf WNT signaling pathway inhibitor 2	protein-coding
12.7-8	chr7	15906705	15906948	+	0.0666667	NA	Intergenic	Intergenic	218448	NR_110094	101927524	Hs.386790	NR_110094		LINC02587	MEOX2-AS1	long intergenic non-protein coding RNA 2587	ncRNA
29.3667-6	chr7	31700264	31700826	+	0.0666667	NA	intron (NM_001145123, intron 3 of 3)	Tigger1|DNA|TcMar-Tigger	13330	NM_006658	10842	Hs.227011	NM_006658	ENSG00000106341	PPP1R17	C7orf16|GSBS	protein phosphatase 1 regulatory subunit 17	protein-coding
15.4-16	chr4	98579280	98579660	+	0.0666667	NA	intron (NM_005723, intron 1 of 7)	intron (NM_005723, intron 1 of 7)	79141	NM_005723	10098	Hs.118118	NM_005723	ENSG00000168785	TSPAN5	NET-4|NET4|TM4SF9|TSPAN-5	tetraspanin 5	protein-coding
28.7666-5	chr16	49487273	49488036	+	0.0666667	NA	3' UTR (NM_001330533, exon 6 of 6)	3' UTR (NM_001330533, exon 6 of 6)	30931	NR_144553	1596	Hs.684517	NR_144553	ENSG00000260089	ADAM3B	CYRN2	ADAM metallopeptidase domain 3B (pseudogene)	pseudo
28.1-8	chr5	100737935	100738588	+	0.0666667	NA	Intergenic	L1MB7|LINE|L1	78304	NR_031686	100302288		NR_031686	ENSG00000221263	MIR548P	MIRN548P|hsa-mir-548p	microRNA 548p	ncRNA
19.2333-2	chr1	223273327	223273804	+	0.0666667	NA	intron (NM_017982, intron 3 of 8)	MER77B|LTR|ERVL	90611	NM_001037175	55061	Hs.497841	NM_017982	ENSG00000143502	SUSD4	PRO222	sushi domain containing 4	protein-coding
14.5333-9	chr22	43339434	43339685	+	0.0666667	NA	intron (NM_173050, intron 1 of 21)	intron (NM_173050, intron 1 of 21)	3813	NM_173050	80274	Hs.133995	NM_152514	ENSG00000159307	SCUBE1	-	signal peptide, CUB domain and EGF like domain containing 1	protein-coding
15.9-8	chr2	66873507	66873943	+	0.0666667	NA	Intergenic	Intergenic	-30711	NR_110169	101060019	Hs.116425	NR_110169	ENSG00000230525	LINC01799	-	long intergenic non-protein coding RNA 1799	ncRNA
16.7-7	chr16	58776589	58777063	+	0.0666667	NA	Intergenic	AluSq4|SINE|Alu	-42510	NM_001286220	2806	Hs.599470	NM_002080	ENSG00000125166	GOT2	KAT4|KATIV|KYAT4|mitAAT	glutamic-oxaloacetic transaminase 2	protein-coding
23.0333-14	chr9	75991384	75991899	+	0.0666667	NA	intron (NR_120409, intron 3 of 19)	intron (NR_120409, intron 3 of 19)	100968	NM_006200	5125	Hs.368542	NM_006200	ENSG00000099139	PCSK5	PC5|PC6|PC6A|SPC6	proprotein convertase subtilisin/kexin type 5	protein-coding
15.5333-4	chr2	70571477	70571903	+	0.0666667	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	-17864	NM_001099691	7039	Hs.170009	NM_003236	ENSG00000163235	TGFA	TFGA	transforming growth factor alpha	protein-coding
22.3333-13	chr5	56290954	56291450	+	0.0666667	NA	Intergenic	Intergenic	-57872	NM_024669	79722	Hs.436214	NM_024669	ENSG00000164512	ANKRD55	-	ankyrin repeat domain 55	protein-coding
17.8-7	chr12	45769931	45770339	+	0.0666667	NA	intron (NM_152641, intron 3 of 20)	AluY|SINE|Alu	40426	NM_001347839	196528	Hs.317304	NM_152641	ENSG00000189079	ARID2	BAF200|CSS6|p200	AT-rich interaction domain 2	protein-coding
8.13333	chr5	42170269	42170453	+	0.0666667	NA	intron (NR_104635, intron 1 of 3)	L2a|LINE|L2	4984	NR_104635	101926960	Hs.365692	NR_104635		LOC101926960	-	uncharacterized LOC101926960	ncRNA
25.7333-4	chr12	58659325	58660060	+	0.0666667	NA	intron (NR_120452, intron 1 of 7)	intron (NR_120452, intron 1 of 7)	67990	NR_126341	100506869	Hs.290456	NR_126341	ENSG00000258231	LOC100506869	-	uncharacterized LOC100506869	ncRNA
5.03334-2	chr6	25484450	25484525	+	0.0666667	NA	intron (NM_001173977, intron 12 of 36)	intron (NM_001173977, intron 12 of 36)	-167728	NM_006998	10590	Hs.116428	NM_006998	ENSG00000079689	SCGN	CALBL|DJ501N12.8|SECRET|SEGN|setagin	secretagogin, EF-hand calcium binding protein	protein-coding
22.1-3	chr14	49964106	49964611	+	0.0666667	NA	Intergenic	L1MB4|LINE|L1	-2041	NR_106724	102464828		NR_106724	ENSG00000278038	MIR6076	hsa-mir-6076	microRNA 6076	ncRNA
16.7-4	chr11	24624629	24625057	+	0.0666667	NA	intron (NM_001252008, intron 1 of 11)	(TAT)n|Simple_repeat|Simple_repeat	127790	NM_001252008	338645	Hs.144138	NM_001009909	ENSG00000187398	LUZP2	KFSP2566|PRO6246	leucine zipper protein 2	protein-coding
16.2-7	chr11	67083302	67083609	+	0.0666667	NA	Intergenic	Tigger7|DNA|TcMar-Tigger	26608	NM_001300886	29984	Hs.15114	NM_014578	ENSG00000173156	RHOD	ARHD|RHOHP1|RHOM|Rho	ras homolog family member D	protein-coding
8.93333-3	chr3	68289716	68289903	+	0.0666667	NA	intron (NM_001252216, intron 2 of 4)	L2|LINE|L2	-210828	NR_135532	105377146	Hs.567895	NR_135532		LOC105377146	-	uncharacterized LOC105377146	ncRNA
20.9333-17	chr8	111890666	111891204	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	514296	NR_146282	105375706	Hs.566832	NR_146282	ENSG00000253434	LINC02237	-	long intergenic non-protein coding RNA 2237	ncRNA
22.4-4	chr11	34580862	34581482	+	0.0666667	NA	Intergenic	Intergenic	-39921	NM_001206615	26298	Hs.653859	NM_012153	ENSG00000135373	EHF	ESE3|ESE3B|ESEJ	ETS homologous factor	protein-coding
21.0333-16	chr7	78928297	78928694	+	0.0666667	NA	intron (NM_001301128, intron 2 of 20)	intron (NM_001301128, intron 2 of 20)	-80493	NR_046689	100874021	Hs.128252	NR_046689	ENSG00000226978	MAGI2-AS2	-	MAGI2 antisense RNA 2	ncRNA
17.3333-4	chr14	55482591	55483003	+	0.0666667	NA	Intergenic	Charlie25|DNA|hAT-Charlie	-42252	NM_199047	387332	Hs.528278	NM_199047	ENSG00000182521	TBPL2	TBP2|TRF3	TATA-box binding protein like 2	protein-coding
19.8-19	chr5	26646063	26646489	+	0.0666667	NA	Intergenic	THE1B|LTR|ERVL-MaLR	392310	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
27.0667-6	chr2	61773133	61773767	+	0.0666667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	80610	NM_032180	84140	Hs.440466	NM_032180	ENSG00000170264	FAM161A	RP28	FAM161 centrosomal protein A	protein-coding
18.6-16	chr4	178449663	178450121	+	0.0666667	NA	Intergenic	AluY|SINE|Alu	-541956	NR_108092	101928656	Hs.508131	NR_108092	ENSG00000251504	LINC01099	-	long intergenic non-protein coding RNA 1099	ncRNA
18.8667-6	chr14	76934326	76934628	+	0.0666667	NA	Intergenic	Intergenic	-25161	NR_133913	105370578	Hs.574184	NR_133913	ENSG00000258602	LINC01629	linc-KIAA1737-2	long intergenic non-protein coding RNA 1629	ncRNA
17.1333-8	chr15	82054686	82054997	+	0.0666667	NA	Intergenic	L1M5|LINE|L1	-8823	NM_032246	84206	Hs.104744	NM_032246	ENSG00000183496	MEX3B	MEX-3B|RKHD3|RNF195	mex-3 RNA binding family member B	protein-coding
11.2667-4	chr18	64189731	64190020	+	0.0666667	NA	intron (NR_033881, intron 2 of 9)	intron (NR_033881, intron 2 of 9)	-40849	NR_027245	221241	Hs.567778	NM_152728	ENSG00000179676	LINC00305	C18orf20|HsT1235|NCRNA00305	long intergenic non-protein coding RNA 305	ncRNA
12.4333-14	chr9	115604546	115604909	+	0.0666667	NA	Intergenic	L2c|LINE|L2	139512	NR_109805	101928775	Hs.522362	NR_109805	ENSG00000228714	LOC101928775	-	uncharacterized LOC101928775	ncRNA
7.3	chr19	52151156	52151265	+	0.0666667	NA	Intergenic	MER4-int|LTR|ERV1	-11272	NM_178523	90317	Hs.645225	NM_178523	ENSG00000204611	ZNF616	-	zinc finger protein 616	protein-coding
24.7667-4	chr13	104120409	104121011	+	0.0666667	NA	Intergenic	LTR12|LTR|ERV1	695510	NR_126374	104326190	Hs.334381	NR_126374	ENSG00000234551	LINC01309	TCONS_l2_00007459	long intergenic non-protein coding RNA 1309	ncRNA
18.2-4	chr11	15114821	15115259	+	0.0666667	NA	intron (NM_001042536, intron 1 of 12)	intron (NM_001042536, intron 1 of 12)	117	NM_001042536	387755	Hs.591997	NM_001031853	ENSG00000188487	INSC	-	INSC spindle orientation adaptor protein	protein-coding
16.5333-9	chr6	143211960	143212302	+	0.0666667	NA	intron (NM_001366354, intron 3 of 4)	MER20|DNA|hAT-Charlie	47349	NM_001366361	51390	Hs.567501	NM_016108	ENSG00000146416	AIG1	AIG-1|dJ95L4.1	androgen induced 1	protein-coding
19-19	chr6	90078329	90078834	+	0.0666667	NA	intron (NM_021813, intron 5 of 8)	intron (NM_021813, intron 5 of 8)	184112	NM_032602	84694	Hs.334499	NM_032602	ENSG00000135355	GJA10	CX62	gap junction protein alpha 10	protein-coding
14.2333-12	chr4	39306376	39306640	+	0.0666667	NA	intron (NM_001204747, intron 14 of 24)	(AC)n|Simple_repeat|Simple_repeat	59854	NM_001363496	5981	Hs.507475	NM_002913	ENSG00000035928	RFC1	A1|CANVAS|MHCBFB|PO-GA|RECC1|RFC|RFC140	replication factor C subunit 1	protein-coding
20.2667-6	chr2	81089765	81090336	+	0.0666667	NA	Intergenic	Intergenic	376896	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
15.0667-8	chr2	34098215	34098573	+	0.0666667	NA	intron (NR_126403, intron 4 of 5)	L2a|LINE|L2	31168	NR_132381	106144585	Hs.580486	NR_132381	ENSG00000237790	LINC01318	-	long intergenic non-protein coding RNA 1318	ncRNA
8.4	chr1	247190027	247190197	+	0.0666667	NA	Intergenic	Intergenic	11948	NR_037480	100500849		NR_037480	ENSG00000283881	MIR3916	mir-3916	microRNA 3916	ncRNA
24.3333-4	chr14	44838110	44838682	+	0.0666667	NA	Intergenic	Intergenic	-39270	NR_146457	101927351	Hs.196842	NR_146457		LINC02302	-	long intergenic non-protein coding RNA 2302	ncRNA
18.4-5	chr2	34991018	34991524	+	0.0666667	NA	Intergenic	L2a|LINE|L2	313714	NR_126404	104355288	Hs.624529	NR_126404	ENSG00000228262	LINC01320	-	long intergenic non-protein coding RNA 1320	ncRNA
15.3667-8	chr2	6935708	6936008	+	0.0666667	NA	intron (NR_146069, intron 1 of 3)	intron (NR_146069, intron 1 of 3)	2774	NM_001349183	9781	Hs.22146	NM_014746	ENSG00000151692	RNF144A	RNF144|UBCE7IP4|hUIP4	ring finger protein 144A	protein-coding
23.2-20	chr8	131377862	131378343	+	0.0666667	NA	Intergenic	MLT2B3|LTR|ERVL	-337193	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding
19-16	chr4	177769153	177769657	+	0.0666667	NA	intron (NR_028342, intron 2 of 5)	intron (NR_028342, intron 2 of 5)	40648	NR_028342	285501	Hs.722466	NM_001085490	ENSG00000231171	LINC01098	-	long intergenic non-protein coding RNA 1098	ncRNA
27.8-6	chr14	43270034	43270517	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	1237008	NM_032135	84075	Hs.307086	NM_032135	ENSG00000189139	FSCB	C14orf155	fibrous sheath CABYR binding protein	protein-coding
17.7-11	chr3	103106290	103106723	+	0.0666667	NA	Intergenic	Intergenic	417610	NR_039611	100616336		NR_039611	ENSG00000265328	MIR548AB	-	microRNA 548ab	ncRNA
18.2-7	chr15	53432675	53433005	+	0.0666667	NA	Intergenic	MIR|SINE|MIR	108012	NR_102336	256764	Hs.122125	NM_182758	ENSG00000166415	WDR72	AI2A3	WD repeat domain 72	protein-coding
6.06666	chr3	41384134	41384305	+	0.0666667	NA	intron (NM_001322500, intron 35 of 35)	L1MC4|LINE|L1	184714	NM_001330729	1499	Hs.476018	NM_001904	ENSG00000168036	CTNNB1	CTNNB|EVR7|MRD19|NEDSDV|armadillo	catenin beta 1	protein-coding
24.4-20	chr3	36275197	36275697	+	0.0666667	NA	Intergenic	L1ME3B|LINE|L1	-105040	NM_001292049	6769	Hs.56045	NM_003149	ENSG00000144681	STAC	STAC1	SH3 and cysteine rich domain	protein-coding
17.8667	chr1	79189160	79189524	+	0.0666667	NA	Intergenic	Intergenic	-182612	NM_022159	64123	Hs.132314	NM_022159	ENSG00000162618	ADGRL4	ELTD1|ETL|KPG_003	adhesion G protein-coupled receptor L4	protein-coding
22.5333-18	chr7	81112052	81112493	+	0.0666667	NA	Intergenic	Intergenic	-189883	NM_001350120	10512	Hs.269109	NM_006379	ENSG00000075223	SEMA3C	SEMAE|SemE	semaphorin 3C	protein-coding
18.5667-3	chr13	36688606	36689102	+	0.0666667	NA	intron (NM_203451, intron 1 of 1)	intron (NM_203451, intron 1 of 1)	14834	NM_203451	400120	Hs.422375	NM_203451	ENSG00000180440	SERTM1	C13orf36	serine rich and transmembrane domain containing 1	protein-coding
19.1667-3	chr12	13491671	13492196	+	0.0666667	NA	Intergenic	Intergenic	-115188	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA
26.4-7	chr19	5540805	5541499	+	0.0666667	NA	Intergenic	Intergenic	26882	NR_027064	257000	Hs.515575	NM_153375	ENSG00000223573	TINCR	LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16	TINCR ubiquitin domain containing	ncRNA
23.0667	chr10	80077140	80077695	+	0.0666667	NA	intron (NR_027432, intron 1 of 3)	AluSx3|SINE|Alu	-1229	NM_001270373	80195	Hs.169982	NM_025125	ENSG00000133678	TMEM254	C10orf57|bA369J21.6	transmembrane protein 254	protein-coding
8.66667	chr2	239732556	239732703	+	0.0666667	NA	Intergenic	Intergenic	-30231	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA
25.7	chr1	105205952	105206522	+	0.0666667	NA	Intergenic	L1PB3|LINE|L1	412698	NR_125954	101928476	Hs.563856	NR_125954	ENSG00000230768	LINC01676	-	long intergenic non-protein coding RNA 1676	ncRNA
9.5-3	chr2	169105573	169105772	+	0.0666667	NA	Intergenic	Intergenic	24565	NM_001142271	10170	Hs.179608	NM_005771	ENSG00000073737	DHRS9	3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4	dehydrogenase/reductase 9	protein-coding
3.96667	chr10	33616971	33617048	+	0.0666667	NA	Intergenic	Charlie29a|DNA|hAT-Charlie	155671	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA
17.8-10	chr2	71680186	71680548	+	0.0666667	NA	intron (NM_001130985, intron 52 of 54)	L1ME4a|LINE|L1	213668	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|LGMDR2|MMD1	dysferlin	protein-coding
21.0667-10	chr7	47247493	47248074	+	0.0666667	NA	Intergenic	Intergenic	217020	NR_145813	109623468		NR_145813		SNORD151	-	small nucleolar RNA, C/D box 151	snoRNA
13.3-6	chr2	206054182	206054381	+	0.0666667	NA	intron (NM_017759, intron 4 of 10)	FLAM_C|SINE|Alu	31893	NM_017759	54891	Hs.445036	NM_017759	ENSG00000114933	INO80D	-	INO80 complex subunit D	protein-coding
22.7-3	chr2	166873219	166873679	+	0.0666667	NA	Intergenic	Intergenic	-15038	NM_152381	129446	Hs.73680	NM_152381	ENSG00000163092	XIRP2	CMYA3	xin actin binding repeat containing 2	protein-coding
9.5-5	chr5	131855980	131856177	+	0.0666667	NA	intron (NM_001303622, intron 9 of 12)	intron (NM_001303622, intron 9 of 12)	-59061	NM_133372	96459	Hs.591273	NM_133372	ENSG00000217128	FNIP1	-	folliculin interacting protein 1	protein-coding
18.7667-4	chr10	123997535	123997988	+	0.0666667	NA	Intergenic	Intergenic	94645	NM_015892	51363	Hs.287537	NM_014863	ENSG00000182022	CHST15	BRAG|GALNAC4S-6ST	carbohydrate sulfotransferase 15	protein-coding
8.46667-2	chr13	63098392	63098519	+	0.0666667	NA	Intergenic	Intergenic	229639	NR_126409	104355293	Hs.121439	NR_126409	ENSG00000227564	LINC00376	-	long intergenic non-protein coding RNA 376	ncRNA
12.4667-3	chr15	98564111	98564433	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-49936	NM_182562	283777	Hs.668070	NM_182562	ENSG00000283597	FAM169B	-	family with sequence similarity 169 member B	protein-coding
17.1-3	chr11	113679774	113680280	+	0.0666667	NA	Intergenic	MER96|DNA|hAT-Tip100	26281	NM_030770	80975	Hs.46720	NM_030770	ENSG00000166682	TMPRSS5	SPINESIN	transmembrane serine protease 5	protein-coding
21.4333-10	chr6	35174963	35175361	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	-33752	NM_001261819	6954	Hs.435371	NM_018679	ENSG00000124678	TCP11	D6S230E|FPPR	t-complex 11	protein-coding
15.6-9	chr5	13935872	13936325	+	0.0666667	NA	intron (NM_001369, intron 1 of 78)	intron (NM_001369, intron 1 of 78)	8382	NM_001369	1767	Hs.212360	NM_001369	ENSG00000039139	DNAH5	CILD3|DNAHC5|HL1|KTGNR|PCD	dynein axonemal heavy chain 5	protein-coding
13.3-7	chr8	125172206	125172550	+	0.0666667	NA	intron (NR_146191, intron 5 of 8)	intron (NR_146191, intron 5 of 8)	80518	NM_173685	286053	Hs.388297	NM_173685	ENSG00000156831	NSMCE2	C8orf36|MMS21|NSE2|ZMIZ7	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase	protein-coding
8.9-4	chr3	126441171	126441349	+	0.0666667	NA	intron (NR_104249, intron 7 of 8)	intron (NR_104249, intron 7 of 8)	34631	NM_025112	79364	Hs.440049	NM_025112	ENSG00000070476	ZXDC	ZXDL	ZXD family zinc finger C	protein-coding
20.4666-5	chr3	111816201	111816777	+	0.0666667	NA	intron (NM_001185106, intron 4 of 4)	THE1B-int|LTR|ERVL-MaLR	-42691	NM_145753	90102	Hs.603252	NM_145753	ENSG00000144824	PHLDB2	LL5b|LL5beta	pleckstrin homology like domain family B member 2	protein-coding
19.2-9	chr4	180627556	180628128	+	0.0666667	NA	Intergenic	MLT1J|LTR|ERVL-MaLR	531307	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
31.3667-5	chr2	51879094	51879711	+	0.0666667	NA	intron (NR_135237, intron 7 of 10)	L1MA2|LINE|L1	-491246	NR_135239	105374596		NR_135239	ENSG00000225444	LINC01867	-	long intergenic non-protein coding RNA 1867	ncRNA
24.0333-14	chr6	843321	843992	+	0.0666667	NA	Intergenic	MLT1B|LTR|ERVL-MaLR	-24842	NR_110853	101927691	Hs.552556	NR_110853		LOC101927691	-	uncharacterized LOC101927691	ncRNA
11.1-2	chr9	79816062	79816228	+	0.0666667	NA	Intergenic	Intergenic	-8385	NR_121213	101927477	Hs.571630	NR_121212		LINC01507	XLOC_000303	long intergenic non-protein coding RNA 1507	ncRNA
14.4667-3	chr2	81862033	81862354	+	0.0666667	NA	Intergenic	MER20|DNA|hAT-Charlie	-395247	NR_110161	100507201	Hs.98589	NR_110161	ENSG00000235519	LINC01815	-	long intergenic non-protein coding RNA 1815	ncRNA
13.9333-8	chr4	139562843	139563180	+	0.0666667	NA	Intergenic	Intergenic	-6242	NR_131339	80854	Hs.480792	NM_030648	ENSG00000145391	SETD7	KMT7|SET7|SET7/9|SET9	SET domain containing 7, histone lysine methyltransferase	protein-coding
25.7-11	chr4	122858854	122859583	+	0.0666667	NA	intron (NM_001361665, intron 1 of 2)	L2a|LINE|L2	32387	NM_001361665	2247	Hs.284244	NM_002006	ENSG00000138685	FGF2	BFGF|FGF-2|FGFB|HBGF-2	fibroblast growth factor 2	protein-coding
14.7-2	chr11	15013254	15013601	+	0.0666667	NA	Intergenic	AluYa5|SINE|Alu	-41076	NM_001741	796	Hs.37058	NM_001741	ENSG00000110680	CALCA	CALC1|CGRP|CGRP-I|CGRP1|CT|KC|PCT	calcitonin related polypeptide alpha	protein-coding
24-9	chr20	55025818	55026374	+	0.0666667	NA	Intergenic	Intergenic	-396947	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA
20.7333-9	chr15	79425161	79425737	+	0.0666667	NA	Intergenic	Intergenic	-7067	NM_015206	23251	Hs.301654	NM_015206	ENSG00000169330	MINAR1	KIAA1024|UBTOR	membrane integral NOTCH2 associated receptor 1	protein-coding
8.26667-5	chr9	112904666	112904830	+	0.0666667	NA	Intergenic	AluJo|SINE|Alu	-13872	NM_033051	57864	Hs.512668	NM_033051	ENSG00000119457	SLC46A2	Ly110|TSCOT	solute carrier family 46 member 2	protein-coding
11.8333-12	chrX	75799557	75799761	+	0.0666667	NA	Intergenic	L1PA5|LINE|L1	-14405	NM_138703	139599	Hs.356869	NM_138703	ENSG00000186675	MAGEE2	HCA3	MAGE family member E2	protein-coding
10.3333-7	chr8	144847788	144847974	+	0.0666667	NA	TTS (NM_001330623)	TTS (NM_001330623)	5167	NM_014066	28991	Hs.493218	NM_014066	ENSG00000170619	COMMD5	HCARG|HT002	COMM domain containing 5	protein-coding
13.7333-2	chr18	24232908	24233225	+	0.0666667	NA	intron (NM_001242508, intron 4 of 15)	intron (NM_001242508, intron 4 of 15)	39166	NM_018030	114876	Hs.370725	NM_018030	ENSG00000141447	OSBPL1A	ORP-1|ORP1|OSBPL1B	oxysterol binding protein like 1A	protein-coding
16.2-4	chr10	81151160	81151452	+	0.0666667	NA	Intergenic	L1M4a1|LINE|L1	501509	NR_155749	105378386	Hs.531456	NR_155749		LINC02655	-	long intergenic non-protein coding RNA 2655	ncRNA
22.2333-6	chr15	70080833	70081475	+	0.0666667	NA	intron (NM_020908, intron 4 of 19)	MIR3|SINE|MIR	-1686	NR_030714	693214		NR_030714	ENSG00000207965	MIR629	MIRN629|hsa-mir-629|mir-629	microRNA 629	ncRNA
29.5667-9	chr5	35271734	35272315	+	0.0666667	NA	Intergenic	Intergenic	-41537	NM_000949	5618	Hs.368587	NM_000949	ENSG00000113494	PRLR	HPRL|MFAB|RI-PRLR|hPRLrI	prolactin receptor	protein-coding
23.3667-14	chr6	154422727	154423247	+	0.0666667	NA	intron (NM_001368116, intron 7 of 12)	intron (NM_001368116, intron 7 of 12)	11086	NM_001368119	154043	Hs.16064	NM_173515	ENSG00000153721	CNKSR3	CNK3|CNK3/IPCEF1|MAGI1	CNKSR family member 3	protein-coding
13.5667	chr2	44926300	44926650	+	0.0666667	NA	intron (NR_147195, intron 1 of 1)	intron (NR_147195, intron 1 of 1)	12413	NR_147194	107985879	Hs.436392	NR_147194	ENSG00000259439	LINC01833	K21.1|RP11-89	long intergenic non-protein coding RNA 1833	ncRNA
20.4333-8	chr4	149505775	149506376	+	0.0666667	NA	intron (NM_001363507, intron 12 of 13)	intron (NM_001363507, intron 12 of 13)	309768	NM_001363509	285423	Hs.591689	NM_001363507	ENSG00000234828	IQCM	-	IQ motif containing M	protein-coding
18.9667	chr10	108323304	108323588	+	0.0666667	NA	Intergenic	MER51C|LTR|ERV1	-254153	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA
23.9667-3	chr2	56232090	56232558	+	0.0666667	NA	intron (NM_001348516, intron 2 of 2)	L2b|LINE|L2	-46554	NR_125368	100129434	Hs.580330	NR_125368		LOC100129434	-	uncharacterized LOC100129434	ncRNA
17.5333-12	chr4	115704859	115705259	+	0.0666667	NA	Intergenic	L1PA8|LINE|L1	-591439	NM_022569	64579	Hs.591700	NM_022569	ENSG00000138653	NDST4	N-HSST|N-HSST 4|NDST-4|NHSST4	N-deacetylase and N-sulfotransferase 4	protein-coding
28.1333-3	chr12	71429409	71429838	+	0.0666667	NA	Intergenic	Intergenic	-10175	NM_001277227	8549	Hs.658889	NM_003667	ENSG00000139292	LGR5	FEX|GPR49|GPR67|GRP49|HG38	leucine rich repeat containing G protein-coupled receptor 5	protein-coding
6.06667	chr2	5062633	5062755	+	0.0666667	NA	Intergenic	Intergenic	-406472	NR_034134	727982	Hs.444391	NR_034134	ENSG00000231532	LINC01249	-	long intergenic non-protein coding RNA 1249	ncRNA
7.06666-6	chr6	105091805	105092002	+	0.0666667	NA	Intergenic	Intergenic	44443	NM_147147	11149	Hs.221660	NM_007073	ENSG00000112276	BVES	CARICK|HBVES|LGMD2X|LGMDR25|POP1|POPDC1	blood vessel epicardial substance	protein-coding
19.9667-9	chr4	33184908	33185388	+	0.0666667	NA	Intergenic	Intergenic	834110	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
16.7-16	chr6	38361348	38361814	+	0.0666667	NA	intron (NM_052893, intron 7 of 11)	AluSp|SINE|Alu	-120015	NR_144472	101929425	Hs.665280	NR_144472	ENSG00000226533	BTBD9-AS1	-	BTBD9 antisense RNA 1	ncRNA
23.1333-7	chr4	83840094	83840665	+	0.0666667	NA	Intergenic	L1MEd|LINE|L1	304271	NM_032717	84803	Hs.99196	NM_032717	ENSG00000138678	GPAT3	AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1	glycerol-3-phosphate acyltransferase 3	protein-coding
10.7-5	chr22	34463688	34463951	+	0.0666667	NA	Intergenic	Intergenic	534097	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
11.0333-7	chr8	143370290	143370596	+	0.0666667	NA	intron (NM_052924, intron 1 of 14)	intron (NM_052924, intron 1 of 14)	1567	NM_052924	114822	Hs.521912	NM_052924	ENSG00000158106	RHPN1	ODF5|RHOPHILIN|RHPN	rhophilin Rho GTPase binding protein 1	protein-coding
14.3-5	chr14	67739472	67739769	+	0.0666667	NA	Intergenic	Intergenic	37734	NM_152443	145226	Hs.415322	NM_152443	ENSG00000139988	RDH12	LCA13|RP53|SDR7C2	retinol dehydrogenase 12	protein-coding
12.9-2	chr17	59896739	59896932	+	0.0666667	NA	intron (NM_001272044, intron 2 of 15)	intron (NM_001272044, intron 2 of 15)	3714	NM_001369677	6198	Hs.463642	NM_003161	ENSG00000108443	RPS6KB1	PS6K|S6K|S6K-beta-1|S6K1|STK14A|p70 S6KA|p70(S6K)-alpha|p70-S6K|p70-alpha	ribosomal protein S6 kinase B1	protein-coding
24.9333-3	chr22	30002603	30003146	+	0.0666667	NA	intron (NM_153051, intron 8 of 18)	(TC)n|Simple_repeat|Simple_repeat	-4175	NR_106876	102466742		NR_106876	ENSG00000275818	MIR6818	hsa-mir-6818	microRNA 6818	ncRNA
31.4333-4	chr4	45860138	45860765	+	0.0666667	NA	Intergenic	L1MC3|LINE|L1	263603	NM_173536	2565	Hs.375051	NM_173536	ENSG00000163285	GABRG1	-	gamma-aminobutyric acid type A receptor gamma1 subunit	protein-coding
7.6	chr12	952105	952264	+	0.0666667	NA	intron (NM_001297419, intron 1 of 11)	AluJr4|SINE|Alu	-2462	NM_001297421	5893	Hs.410355	NM_134422	ENSG00000002016	RAD52	-	RAD52 homolog, DNA repair protein	protein-coding
14.4667-7	chr7	81486206	81486569	+	0.0666667	NA	Intergenic	HERV16-int|LTR|ERVL	75432	NR_136264	105369146	Hs.730390	NR_136264		LOC105369146	-	uncharacterized LOC105369146	ncRNA
17.7667-5	chr18	1240123	1240421	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	119357	NR_110327	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
9.26667-2	chr5	42695493	42695662	+	0.0666667	NA	intron (NM_001242403, intron 5 of 9)	intron (NM_001242403, intron 5 of 9)	-61241	NM_001134848	100129792	Hs.745017	NM_001134848	ENSG00000198865	CCDC152	CH5400	coiled-coil domain containing 152	protein-coding
23.2333-8	chr5	121966397	121966928	+	0.0666667	NA	intron (NM_152546, intron 1 of 7)	intron (NM_152546, intron 1 of 7)	4687	NM_152546	153443	Hs.107622	NM_152546	ENSG00000151304	SRFBP1	BUD22|P49|Rlb1|STRAP|p49/STRAP	serum response factor binding protein 1	protein-coding
13.3667-6	chr16	8887755	8888029	+	0.0666667	NA	Intergenic	Intergenic	-18880	NM_001278260	23589	Hs.632184	NM_014316	ENSG00000153048	CARHSP1	CRHSP-24|CRHSP24|CSDC1	calcium regulated heat stable protein 1	protein-coding
14.6-7	chr2	24871835	24872123	+	0.0666667	NA	intron (NM_001320613, intron 3 of 21)	intron (NM_001320613, intron 3 of 21)	48258	NM_004036	109	Hs.467898	NM_004036	ENSG00000138031	ADCY3	AC-III|AC3|BMIQ19	adenylate cyclase 3	protein-coding
15.0333-10	chr22	30165045	30165396	+	0.0666667	NA	intron (NM_001329457, intron 11 of 11)	L1MB3|LINE|L1	-73974	NR_149070	110806283		NR_149070	ENSG00000232530	LIF-AS1	Lnc-LIF-AS	LIF antisense RNA 1	ncRNA
20.0333-10	chr3	126776924	126777255	+	0.0666667	NA	intron (NM_032343, intron 4 of 7)	intron (NM_032343, intron 4 of 7)	72849	NM_001320610	84303	Hs.518119	NM_032343	ENSG00000159685	CHCHD6	CHCM1|MICOS25|Mic25|PPP1R23	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
20.8667-4	chr11	106717058	106717571	+	0.0666667	NA	intron (NM_000855, intron 6 of 7)	MIRb|SINE|MIR	301162	NM_000855	2977	Hs.24321	NM_000855	ENSG00000152402	GUCY1A2	GC-SA2|GUC1A2	guanylate cyclase 1 soluble subunit alpha 2	protein-coding
25.9-11	chr5	147913794	147914182	+	0.0666667	NA	Intergenic	Intergenic	-7450	NM_206966	389336	Hs.660038	NM_206966	ENSG00000178776	C5orf46	SSSP1	chromosome 5 open reading frame 46	protein-coding
24.0333	chr1	89439849	89440515	+	0.0666667	NA	Intergenic	HERVL-int|LTR|ERVL	32503	NR_003133	400759	Hs.661968	NR_003133	ENSG00000225492	GBP1P1	-	guanylate binding protein 1 pseudogene 1	pseudo
29.2667-2	chr15	83300592	83301216	+	0.0666667	NA	Intergenic	Intergenic	-16240	NM_001717	646	Hs.459153	NM_001717	ENSG00000169594	BNC1	BNC|BSN1|HsT19447	basonuclin 1	protein-coding
13.4	chr10	77048275	77048634	+	0.0666667	NA	intron (NM_001271519, intron 14 of 28)	intron (NM_001271519, intron 14 of 28)	-92377	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA
9.33332	chr2	78197229	78197503	+	0.0666667	NA	intron (NR_110288, intron 1 of 3)	L1MA6|LINE|L1	93365	NR_110288	101927967	Hs.406952	NR_110288		LOC101927967	-	uncharacterized LOC101927967	ncRNA
24.6333-5	chr3	44065310	44066011	+	0.0666667	NA	Intergenic	Intergenic	-48552	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA
16-2	chr15	26225624	26225978	+	0.0666667	NA	Intergenic	Intergenic	109988	NR_038851	503519	Hs.371380	NR_038851	ENSG00000259150	LINC00929	-	long intergenic non-protein coding RNA 929	ncRNA
16.6	chr1	70086991	70087451	+	0.0666667	NA	intron (NM_001370785, intron 24 of 26)	intron (NM_001370785, intron 24 of 26)	118358	NM_017768	55631	Hs.147836	NM_017768	ENSG00000066557	LRRC40	dJ677H15.1	leucine rich repeat containing 40	protein-coding
11.3-4	chr21	27525045	27525357	+	0.0666667	NA	Intergenic	Intergenic	-197178	NR_024357	54088	Hs.570434	NR_024357	ENSG00000225298	LINC00113	C21orf23|NCRNA00113	long intergenic non-protein coding RNA 113	ncRNA
11.5-13	chr7	91965739	91965978	+	0.0666667	NA	intron (NM_147185, intron 1 of 49)	L1MA4|LINE|L1	24983	NM_005751	10142	Hs.651221	NM_005751	ENSG00000127914	AKAP9	AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO	A-kinase anchoring protein 9	protein-coding
11.5333-6	chr3	127580799	127580981	+	0.0666667	NA	intron (NM_001353004, intron 3 of 12)	intron (NM_001353004, intron 3 of 12)	-5559	NR_106883	102466199		NR_106883	ENSG00000275067	MIR6825	hsa-mir-6825	microRNA 6825	ncRNA
17.4-6	chr14	78316950	78317360	+	0.0666667	NA	intron (NR_073547, intron 4 of 20)	MLT2B1|LTR|ERVL	-86564	NM_004796	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding
5.26667-2	chr10	72419092	72419172	+	0.0666667	NA	intron (NM_001195519, intron 4 of 6)	intron (NM_001195519, intron 4 of 6)	-64213	NM_001365080	54788	Hs.500013	NM_017626	ENSG00000148719	DNAJB12	DJ10	DnaJ heat shock protein family (Hsp40) member B12	protein-coding
16.7333-17	chr7	18362261	18362761	+	0.0666667	NA	intron (NM_001321896, intron 1 of 12)	intron (NM_001321896, intron 1 of 12)	72419	NM_001321896	9734	Hs.196054	NM_014707	ENSG00000048052	HDAC9	HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR	histone deacetylase 9	protein-coding
17.8333-6	chr21	31935742	31936134	+	0.0666667	NA	intron (NM_014586, intron 2 of 10)	AluSx|SINE|Alu	62918	NM_014586	30811	Hs.109437	NM_014586	ENSG00000142149	HUNK	-	hormonally up-regulated Neu-associated kinase	protein-coding
5.56667	chr11	44523493	44523577	+	0.0666667	NA	Intergenic	(AGGAGA)n|Simple_repeat|Simple_repeat	-42128	NM_002231	3732	Hs.527778	NM_002231	ENSG00000085117	CD82	4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27	CD82 molecule	protein-coding
10.2333-3	chr7	93421287	93421440	+	0.0666667	NA	Intergenic	Intergenic	61492	NR_030388	724023		NR_030388	ENSG00000208014	MIR653	MIRN653|hsa-mir-653|mir-653	microRNA 653	ncRNA
19.8666-5	chr22	44884799	44885385	+	0.0666667	NA	intron (NR_134535, intron 11 of 11)	intron (NR_134535, intron 11 of 11)	118527	NR_147506	101927551	Hs.683911	NR_147506	ENSG00000230922	LOC101927551	-	uncharacterized LOC101927551	ncRNA
9.36667-2	chr10	91134715	91134855	+	0.0666667	NA	Intergenic	Intergenic	18295	NR_002779	119369	Hs.441287	NR_002779		NUDT9P1	C10orf98|bA56M3.1	nudix hydrolase 9 pseudogene 1	pseudo
17.8-2	chr11	13814971	13815238	+	0.0666667	NA	intron (NR_149108, intron 3 of 3)	ORSL|DNA|hAT-Tip100	30718	NR_149108	105376562	Hs.577257	NR_149108	ENSG00000255411	LINC02548	-	long intergenic non-protein coding RNA 2548	ncRNA
24.5-12	chr5	44002507	44003082	+	0.0666667	NA	Intergenic	Intergenic	-385938	NR_108034	101927075	Hs.617390	NR_108034	ENSG00000248464	FGF10-AS1	-	FGF10 antisense RNA 1	ncRNA
17.9333-13	chr5	14372781	14373304	+	0.0666667	NA	intron (NM_007118, intron 18 of 56)	THE1C|LTR|ERVL-MaLR	-90941	NR_145815	109623458		NR_145815		SNORD170	-	small nucleolar RNA, C/D box 170	snoRNA
29.6666-7	chr8	122977470	122978293	+	0.0666667	NA	Intergenic	Intergenic	47891	NM_001363963	79139	Hs.241576	NM_024295	ENSG00000136986	DERL1	DER-1|DER1|derlin-1	derlin 1	protein-coding
31.1-6	chr10	133441964	133442431	+	0.0666667	NA	Intergenic	Intergenic	-11731	NR_149718	619207	Hs.659384	NM_001033584	ENSG00000214279	SCART1	-	scavenger receptor family member expressed on T cells 1	pseudo
20.1333-7	chr17	80504989	80505501	+	0.0666667	NA	Intergenic	Intergenic	-28638	NM_002522	4884	Hs.514556	NM_002522	ENSG00000171246	NPTX1	NP1	neuronal pentraxin 1	protein-coding
14.6333-4	chr12	55449504	55449915	+	0.0666667	NA	Intergenic	Intergenic	-2505	NM_054105	341416	Hs.524483	NM_054105	ENSG00000179695	OR6C2	OR6C67	olfactory receptor family 6 subfamily C member 2	protein-coding
26.2333-2	chr1	106685748	106686141	+	0.0666667	NA	Intergenic	L1MB1|LINE|L1	-132295	NR_147165	105378889	Hs.568674	NR_147165	ENSG00000237460	LINC01661	-	long intergenic non-protein coding RNA 1661	ncRNA
19.0333-6	chr15	60000344	60000725	+	0.0666667	NA	Intergenic	Intergenic	-3777	NM_012182	27023	Hs.734475	NM_012182	ENSG00000171956	FOXB1	FKH5|HFKH-5	forkhead box B1	protein-coding
18.6333-15	chr5	34807177	34807477	+	0.0666667	NA	intron (NM_015577, intron 5 of 17)	L2b|LINE|L2	-31837	NM_144725	153657	Hs.435742	NM_144725	ENSG00000205838	TTC23L	MC25-1	tetratricopeptide repeat domain 23 like	protein-coding
19.1333-9	chr5	150229711	150230211	+	0.0666667	NA	intron (NM_001369025, intron 15 of 17)	intron (NM_001369025, intron 15 of 17)	39899	NM_014228	6534	Hs.241597	NM_014228	ENSG00000011083	SLC6A7	PROT	solute carrier family 6 member 7	protein-coding
16.1667-5	chr12	43780424	43780761	+	0.0666667	NA	intron (NM_001351343, intron 7 of 10)	AluSp|SINE|Alu	21648	NM_001114182	51135	Hs.138499	NM_016123	ENSG00000198001	IRAK4	IPD1|IRAK-4|NY-REN-64|REN64	interleukin 1 receptor associated kinase 4	protein-coding
7.46667	chr14	101284256	101284403	+	0.0666667	NA	Intergenic	L1MEh|LINE|L1	123593	NR_126006	338002	Hs.124848	NR_126006	ENSG00000259023	LINC00524	C14orf71	long intergenic non-protein coding RNA 524	ncRNA
15.1667-10	chr7	16364659	16364939	+	0.0666667	NA	intron (NM_001101417, intron 2 of 8)	intron (NM_001101417, intron 2 of 8)	56739	NM_001101426	729920	Hs.636502	NM_001101417	ENSG00000214960	CRPPA	ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD	CDP-L-ribitol pyrophosphorylase A	protein-coding
18.9-15	chr7	96078456	96078921	+	0.0666667	NA	intron (NM_004411, intron 15 of 16)	intron (NM_004411, intron 15 of 16)	141068	NR_030322	693176		NR_030322	ENSG00000208025	MIR591	MIRN591|hsa-mir-591	microRNA 591	ncRNA
14-11	chr5	19642887	19643276	+	0.0666667	NA	intron (NM_001349562, intron 5 of 13)	L1MA9|LINE|L1	243191	NM_001291957	1016	Hs.317632	NM_004934	ENSG00000145526	CDH18	CDH14|CDH14L|CDH24	cadherin 18	protein-coding
23.8666-3	chr20	54494102	54494750	+	0.0666667	NA	intron (NM_018431, intron 1 of 7)	intron (NM_018431, intron 1 of 7)	18833	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
12.9333-2	chr10	77575401	77575750	+	0.0666667	NA	intron (NM_001271519, intron 1 of 28)	L3|LINE|CR1	62233	NM_001161352	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding
29.2666	chr1	211886678	211887480	+	0.0666667	NA	Intergenic	Intergenic	56118	NR_135820	102723727	Hs.147656	NR_135818	ENSG00000229258	LPGAT1-AS1	-	LPGAT1 antisense RNA 1	ncRNA
20.8333-15	chr5	43396794	43397326	+	0.0666667	NA	promoter-TSS (NM_001301875)	promoter-TSS (NM_001301875)	77	NM_001301875	56477	Hs.656904	NM_019846	ENSG00000151882	CCL28	CCK1|MEC|SCYA28	C-C motif chemokine ligand 28	protein-coding
17.4667-6	chr12	39029734	39030102	+	0.0666667	NA	Intergenic	MER65A|LTR|ERV1	-124327	NM_153634	144402	Hs.40910	NM_153634	ENSG00000139117	CPNE8	-	copine 8	protein-coding
29.9333-13	chr9	79019359	79019933	+	0.0666667	NA	Intergenic	Intergenic	126020	NR_109771	101927450	Hs.738041	NR_109771	ENSG00000260995	LOC101927450	-	uncharacterized LOC101927450	ncRNA
13.8333-11	chr8	122758022	122758319	+	0.0666667	NA	Intergenic	Intergenic	-23485	NM_014943	22882	Hs.377090	NM_014943	ENSG00000178764	ZHX2	AFR1|RAF	zinc fingers and homeoboxes 2	protein-coding
21.0333-15	chr7	34341178	34341693	+	0.0666667	NA	Intergenic	Intergenic	-316783	NM_001300933	387129	Hs.652373	NM_207172	ENSG00000187258	NPSR1	ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1	neuropeptide S receptor 1	protein-coding
30.1667-3	chr2	75314594	75315354	+	0.0666667	NA	Intergenic	Arthur1B|DNA|hAT-Tip100	-115454	NM_001058	6869	Hs.633301	NM_001058	ENSG00000115353	TACR1	NK1R|NKIR|SPR|TAC1R	tachykinin receptor 1	protein-coding
17.7-8	chr2	136522015	136522399	+	0.0666667	NA	Intergenic	Intergenic	-243338	NM_001316349	80731	Hs.68533	NM_001080427	ENSG00000144229	THSD7B	-	thrombospondin type 1 domain containing 7B	protein-coding
30.7-9	chr7	14587664	14588289	+	0.0666667	NA	intron (NM_001350717, intron 16 of 24)	Tigger1|DNA|TcMar-Tigger	253474	NM_145695	1607	Hs.567255	NM_004080	ENSG00000136267	DGKB	DAGK2|DGK|DGK-BETA	diacylglycerol kinase beta	protein-coding
16.7-17	chrX	17236940	17237380	+	0.0666667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	-138040	NM_001291867	4810	Hs.201623	NM_198270	ENSG00000188158	NHS	CTRCT40|CXN|SCML1	NHS actin remodeling regulator	protein-coding
27.7-14	chr8	24334552	24335224	+	0.0666667	NA	intron (NM_014265, intron 13 of 22)	intron (NM_014265, intron 13 of 22)	40819	NM_014265	10863	Hs.174030	NM_014265	ENSG00000042980	ADAM28	ADAM 28|MDC-L|MDCL|eMDC II|eMDCII	ADAM metallopeptidase domain 28	protein-coding
16.5333-5	chr2	21491002	21491364	+	0.0666667	NA	Intergenic	Intergenic	219469	NR_038837	645949	Hs.456782	NR_038837	ENSG00000229621	LINC01822	-	long intergenic non-protein coding RNA 1822	ncRNA
27.6-16	chr7	138497968	138498603	+	0.0666667	NA	intron (NM_003852, intron 1 of 18)	AluSx1|SINE|Alu	38026	NM_015905	8805	Hs.490287	NM_003852	ENSG00000122779	TRIM24	PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1	tripartite motif containing 24	protein-coding
19.5667-10	chr7	105195866	105196281	+	0.0666667	NA	intron (NM_182692, intron 3 of 15)	intron (NM_182692, intron 3 of 15)	73004	NM_001350745	6733	Hs.285197	NM_182691	ENSG00000135250	SRPK2	SFRSK2	SRSF protein kinase 2	protein-coding
17.1333-18	chr5	60129495	60129877	+	0.0666667	NA	intron (NM_001349243, intron 2 of 16)	intron (NM_001349243, intron 2 of 16)	-235960	NM_001104631	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding
26.3667	chr11	127014009	127014699	+	0.0666667	NA	Intergenic	Intergenic	11444	NR_040078	283165	Hs.730461	NM_173579	ENSG00000218109	KIRREL3-AS3	NCRNA00288|PRR10	KIRREL3 antisense RNA 3	ncRNA
17.6-7	chr17	77732346	77732722	+	0.0666667	NA	Intergenic	L1ME1|LINE|L1	-3975	NR_104134	100132174	Hs.640110	NR_104134	ENSG00000267790	LINC01987	-	long intergenic non-protein coding RNA 1987	ncRNA
20.2667-14	chr9	108879374	108879836	+	0.0666667	NA	intron (NM_001330749, intron 30 of 34)	intron (NM_001330749, intron 30 of 34)	17339	NM_006687	10881	Hs.123530	NM_006687	ENSG00000187003	ACTL7A	-	actin like 7A	protein-coding
11.7333-2	chr2	42969356	42969597	+	0.0666667	NA	Intergenic	L2a|LINE|L2	70067	NR_110585	102723854	Hs.570165	NR_110585	ENSG00000231826	LINC01819	-	long intergenic non-protein coding RNA 1819	ncRNA
16.9667-9	chr6	45254001	45254389	+	0.0666667	NA	intron (NM_001350325, intron 2 of 10)	intron (NM_001350325, intron 2 of 10)	-56425	NR_030313	693171		NR_030313	ENSG00000207769	MIR586	MIRN586|hsa-mir-586	microRNA 586	ncRNA
28.6667-7	chr3	160858690	160859288	+	0.0666667	NA	intron (NM_001317911, intron 1 of 3)	MLT1K|LTR|ERVL-MaLR	-11609	NR_134243	151742	Hs.389027	NM_139245	ENSG00000163590	PPM1L	PP2C-epsilon|PP2CE|PPM1-LIKE	protein phosphatase, Mg2+/Mn2+ dependent 1L	protein-coding
21.0333-6	chr13	81029237	81029743	+	0.0666667	NA	intron (NR_125770, intron 2 of 3)	AluJb|SINE|Alu	11099	NR_125770	103724386	Hs.539622	NR_125770		LINC00377	TCONS_00021861	long intergenic non-protein coding RNA 377	ncRNA
17.4333-5	chr20	59255633	59256091	+	0.0666667	NA	3' UTR (NM_178457, exon 5 of 5)	3' UTR (NM_178457, exon 5 of 5)	-44749	NM_207033	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding
17.1333	chr11	6132154	6132471	+	0.0666667	NA	Intergenic	Tigger9b|DNA|TcMar-Tigger	24628	NM_001005181	196335	Hs.632154	NM_001005181	ENSG00000180919	OR56B4	OR11-67	olfactory receptor family 56 subfamily B member 4	protein-coding
14.0333-5	chr2	67519187	67519574	+	0.0666667	NA	Intergenic	Intergenic	122047	NM_019002	54465	Hs.353022	NM_019002	ENSG00000143971	ETAA1	ETAA16	ETAA1 activator of ATR kinase	protein-coding
26.5667-4	chr14	22328977	22329518	+	0.0666667	NA	Intergenic	Intergenic	103506	NR_148363	105370401	Hs.435144	NR_148361		LOC105370401	-	uncharacterized LOC105370401	ncRNA
22.4333-2	chr1	163135866	163136396	+	0.0666667	NA	Intergenic	L1PA10|LINE|L1	-25544	NR_110699	101928404	Hs.683933	NR_110699	ENSG00000232892	LOC101928404	-	uncharacterized LOC101928404	ncRNA
21.4-9	chr22	42326448	42326944	+	0.0666667	NA	Intergenic	MIR3|SINE|MIR	42512	NR_120596	102723775	Hs.335413	NR_120595	ENSG00000229891	LINC01315	C22orf32-1|lnc-C22orf32-1	long intergenic non-protein coding RNA 1315	ncRNA
8.6-4	chr2	235409612	235409745	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-84365	NM_001037131	116987	Hs.435039	NM_014914	ENSG00000157985	AGAP1	AGAP-1|CENTG2|GGAP1|cnt-g2	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
8.23333-3	chr2	198451332	198451501	+	0.0666667	NA	Intergenic	Tigger3|DNA|TcMar-Tigger	-76319	NR_110267	101927619	Hs.632942	NR_110267		LINC01923	-	long intergenic non-protein coding RNA 1923	ncRNA
23.1333-12	chr9	33355430	33355911	+	0.0666667	NA	intron (NM_002504, intron 19 of 23)	AluSq2|SINE|Alu	46898	NM_001170	364	Hs.455323	NM_001170	ENSG00000165269	AQP7	AQP7L|AQPap|GLYCQTL	aquaporin 7	protein-coding
10.6667-2	chr2	194963687	194963905	+	0.0666667	NA	Intergenic	Intergenic	233201	NR_110223	101927431	Hs.558215	NR_110223	ENSG00000230173	LINC01790	-	long intergenic non-protein coding RNA 1790	ncRNA
12.3-5	chr4	62502734	62502918	+	0.0666667	NA	Intergenic	Intergenic	-341061	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
18.1-7	chr16	65994353	65994873	+	0.0666667	NA	Intergenic	Intergenic	-372078	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding
23.3667-4	chr12	38814662	38815154	+	0.0666667	NA	intron (NM_153634, intron 6 of 19)	intron (NM_153634, intron 6 of 19)	90683	NM_153634	144402	Hs.40910	NM_153634	ENSG00000139117	CPNE8	-	copine 8	protein-coding
20.3667-9	chr4	123890168	123890582	+	0.0666667	NA	intron (NR_027105, intron 4 of 5)	intron (NR_027105, intron 4 of 5)	116111	NR_027106	285419	Hs.535763	NR_027105	ENSG00000249464	LINC01091	-	long intergenic non-protein coding RNA 1091	ncRNA
14-9	chr22	29633127	29633337	+	0.0666667	NA	intron (NR_156186, intron 2 of 16)	L2|LINE|L2	29599	NM_181829	4771	Hs.187898	NM_000268	ENSG00000186575	NF2	ACN|BANF|SCH	neurofibromin 2	protein-coding
17.9667-8	chr4	66507931	66508381	+	0.0666667	NA	Intergenic	Intergenic	231332	NR_031673	100302177		NR_031673	ENSG00000221563	MIR1269A	MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a	microRNA 1269a	ncRNA
31.0667-8	chr4	26648587	26649125	+	0.0666667	NA	intron (NM_001292054, intron 4 of 17)	intron (NM_001292054, intron 4 of 17)	64772	NM_018317	55296	Hs.479403	NM_018317	ENSG00000109680	TBC1D19	-	TBC1 domain family member 19	protein-coding
6.16667-2	chr5	89212533	89212663	+	0.0666667	NA	intron (NR_136219, intron 7 of 9)	intron (NR_136219, intron 7 of 9)	-308493	NM_001131005	4208	Hs.649965	NM_002397	ENSG00000081189	MEF2C	C5DELq14.3|DEL5q14.3	myocyte enhancer factor 2C	protein-coding
11.0667-4	chr4	126647419	126647709	+	0.0666667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-985393	NM_015693	27152	Hs.391481	NM_015693	ENSG00000164066	INTU	CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20	inturned planar cell polarity protein	protein-coding
10	chr2	124271652	124271807	+	0.0666667	NA	intron (NM_130773, intron 3 of 23)	AluSz|SINE|Alu	246442	NM_001367498	129684	Hs.660653	NM_130773	ENSG00000155052	CNTNAP5	caspr5	contactin associated protein like 5	protein-coding
9.96666	chr10	12562946	12563215	+	0.0666667	NA	intron (NM_001351032, intron 4 of 11)	MLT2B3|LTR|ERVL	-15673	NR_039700	100616151		NR_039700	ENSG00000263584	MIR4480	-	microRNA 4480	ncRNA
9.43333-3	chr6	131191085	131191322	+	0.0666667	NA	intron (NM_016377, intron 5 of 7)	MADE2|DNA|TcMar-Mariner	55736	NM_016377	9465	Hs.486483	NM_004842	ENSG00000118507	AKAP7	AKAP15|AKAP18	A-kinase anchoring protein 7	protein-coding
19.3333-2	chr11	84305630	84306115	+	0.0666667	NA	intron (NM_001142699, intron 7 of 27)	intron (NM_001142699, intron 7 of 27)	11467	NM_001206769	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
22.5333-13	chr3	115392306	115392962	+	0.0666667	NA	Intergenic	Intergenic	-230876	NM_001130064	2596	Hs.134974	NM_002045	ENSG00000172020	GAP43	B-50|PP46	growth associated protein 43	protein-coding
22.9-9	chr2	29365751	29366246	+	0.0666667	NA	intron (NM_004304, intron 5 of 28)	intron (NM_004304, intron 5 of 28)	109379	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA
11.8-3	chr14	51541833	51542099	+	0.0666667	NA	intron (NM_001042481, intron 1 of 14)	intron (NM_001042481, intron 1 of 14)	52838	NM_001042481	122786	Hs.434914	NM_152330	ENSG00000139926	FRMD6	C14orf31|EX1|Willin|c14_5320	FERM domain containing 6	protein-coding
25.7667-7	chr5	157184513	157185137	+	0.0666667	NA	intron (NM_005546, intron 1 of 16)	intron (NM_005546, intron 1 of 16)	3929	NM_005546	3702	Hs.558348	NM_005546	ENSG00000113263	ITK	EMT|LPFS1|LYK|PSCTK2	IL2 inducible T cell kinase	protein-coding
28.8-13	chr7	64376783	64377408	+	0.0666667	NA	Intergenic	BSR/Beta|Satellite|Satellite	-56598	NR_029404	649395	Hs.728871	NR_029404		YWHAEP1	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1	pseudo
11.5-8	chr2	125537574	125537746	+	0.0666667	NA	Intergenic	Intergenic	580325	NR_146970	105373600	Hs.555059	NR_146970	ENSG00000226813	LINC01941	-	long intergenic non-protein coding RNA 1941	ncRNA
9.06667-2	chr14_GL000225v1_random	71316	71478	+	0.0666667	NA	NA	LSAU|Satellite|Satellite	NA	NA								
17.2667-17	chr6	53080155	53080645	+	0.0666667	NA	intron (NM_033481, intron 5 of 12)	intron (NM_033481, intron 5 of 12)	9427	NM_012347	26268	Hs.216653	NM_012347	ENSG00000112146	FBXO9	FBX9|NY-REN-57|VCIA1|dJ341E18.2	F-box protein 9	protein-coding
20.1667-15	chr7	25298173	25298726	+	0.0666667	NA	Intergenic	AluSp|SINE|Alu	-69963	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding
30.9-2	chr10	92320403	92321083	+	0.0666667	NA	intron (NM_017824, intron 2 of 5)	Tigger3b|DNA|TcMar-Tigger	29576	NM_017824	54708	Hs.573490	NM_017824	ENSG00000198060	MARCH5	MARCH-V|MITOL|RNF153	membrane associated ring-CH-type finger 5	protein-coding
26.1-15	chr7	48814160	48814718	+	0.0666667	NA	Intergenic	L2a|LINE|L2	-110108	NM_152627	168448	Hs.567757	NM_152627	ENSG00000218305	CDC14C	CDC14B2|CDC14Bretro	cell division cycle 14C	protein-coding
20.7-8	chr8	125034211	125034612	+	0.0666667	NA	intron (NM_014846, intron 26 of 28)	AluSz|SINE|Alu	35906	NM_003129	6713	Hs.71465	NM_003129	ENSG00000104549	SQLE	-	squalene epoxidase	protein-coding
16.0333-15	chr6	124990826	124991158	+	0.0666667	NA	intron (NR_104440, intron 1 of 6)	AluJr|SINE|Alu	7624	NM_152553	154214	Hs.12876	NM_152553	ENSG00000146373	RNF217	C6orf172|IBRDC1|OSTL|dJ84N20.1	ring finger protein 217	protein-coding
15.9667-12	chr6	139660239	139660674	+	0.0666667	NA	Intergenic	Intergenic	-110617	NR_038399	100132735	Hs.62646	NR_038399	ENSG00000231426	FILNC1	-	FOXO induced long non-coding RNA 1	ncRNA
7.26667-3	chr20	63282337	63282479	+	0.0666667	NA	intron (NM_001281482, intron 8 of 13)	intron (NM_001281482, intron 8 of 13)	-1904	NR_104023	55738	Hs.25584	NM_018209	ENSG00000101199	ARFGAP1	ARF1GAP|HRIHFB2281	ADP ribosylation factor GTPase activating protein 1	protein-coding
15.9-10	chr3	181968768	181969170	+	0.0666667	NA	intron (NR_104146, intron 2 of 7)	L1M5|LINE|L1	16605	NR_104146	100996490	Hs.606987	NR_104146	ENSG00000242512	LINC01206	-	long intergenic non-protein coding RNA 1206	ncRNA
21.7-18	chr6	159601049	159601614	+	0.0666667	NA	Intergenic	Intergenic	91910	NM_000636	6648	Hs.487046	NM_000636	ENSG00000112096	SOD2	IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD	superoxide dismutase 2	protein-coding
12.3667-2	chr2	98106154	98106508	+	0.0666667	NA	intron (NR_144297, intron 2 of 18)	L1MDa|LINE|L1	19164	NR_144296	200403	Hs.269977	NM_144992	ENSG00000168658	VWA3B	SCAR22	von Willebrand factor A domain containing 3B	protein-coding
25.6667	chr12	7273432	7274006	+	0.0666667	NA	Intergenic	Intergenic	-30613	NM_001080454	341392	Hs.450804	NM_001080454	ENSG00000215009	ACSM4	-	acyl-CoA synthetase medium chain family member 4	protein-coding
7.56666-2	chr7	55393147	55393356	+	0.0666667	NA	intron (NM_018697, intron 2 of 8)	AluSz6|SINE|Alu	27803	NM_018697	55915	Hs.595384	NM_018697	ENSG00000132434	LANCL2	GPR69B|TASP	LanC like 2	protein-coding
5.23334	chr4	152810815	152810893	+	0.0666667	NA	intron (NM_001287433, intron 2 of 8)	MER63D|DNA|hAT-Blackjack	30900	NM_001025595	27236	Hs.416089	NM_014447	ENSG00000164144	ARFIP1	HSU52521	ADP ribosylation factor interacting protein 1	protein-coding
19.2667-5	chr15	44461729	44462107	+	0.0666667	NA	intron (NM_016396, intron 2 of 12)	Tigger2a|DNA|TcMar-Tigger	34289	NM_016396	51496	Hs.497967	NM_016396	ENSG00000137770	CTDSPL2	HSPC058|HSPC129	CTD small phosphatase like 2	protein-coding
13.2-4	chr16	67305407	67305780	+	0.0666667	NA	intron (NM_001100915, intron 2 of 15)	intron (NM_001100915, intron 2 of 15)	21148	NM_001100915	146212	Hs.299127	NM_001100915	ENSG00000168676	KCTD19	-	potassium channel tetramerization domain containing 19	protein-coding
8.63333-5	chr2	215039128	215039301	+	0.0666667	NA	intron (NR_103740, intron 8 of 54)	intron (NR_103740, intron 8 of 54)	-7128	NM_015657	26154	Hs.134585	NM_015657	ENSG00000144452	ABCA12	ARCI4A|ARCI4B|ICR2B|LI2	ATP binding cassette subfamily A member 12	protein-coding
12.1-9	chr3	117559821	117560075	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	130977	NR_146652	105374057	Hs.518179	NR_146652	ENSG00000241213	LINC02024	-	long intergenic non-protein coding RNA 2024	ncRNA
34.8333-4	chr16	34583043	34583624	+	0.0666667	NA	Intergenic	Intergenic	-201853	NR_158158	102724928	Hs.692710	NR_158158		CCNYL3	-	cyclin Y like 3 (pseudogene)	pseudo
8.33333-3	chr17	58932987	58933220	+	0.0666667	NA	intron (NM_014906, intron 1 of 6)	Tigger3a|DNA|TcMar-Tigger	173777	NM_001005207	4591	Hs.579079	NM_015294	ENSG00000108395	TRIM37	MUL|POB1|TEF3	tripartite motif containing 37	protein-coding
22.7667-7	chr16	11176590	11177194	+	0.0666667	NA	intron (NM_015226, intron 22 of 22)	intron (NM_015226, intron 22 of 22)	79290	NM_003745	8651	Hs.50640	NM_003745	ENSG00000185338	SOCS1	CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3	suppressor of cytokine signaling 1	protein-coding
16.6-7	chr22	30033702	30034044	+	0.0666667	NA	intron (NR_110541, intron 3 of 4)	intron (NR_110541, intron 3 of 4)	26824	NR_106876	102466742		NR_106876	ENSG00000275818	MIR6818	hsa-mir-6818	microRNA 6818	ncRNA
20.7667-10	chr6	37317683	37318122	+	0.0666667	NA	intron (NR_130108, intron 12 of 12)	L2a|LINE|L2	-36081	NR_046399	9025	Hs.485278	NM_003958	ENSG00000112130	RNF8	hRNF8	ring finger protein 8	protein-coding
25.5666-4	chr18	9964949	9965642	+	0.0666667	NA	Intergenic	Intergenic	51279	NM_194434	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding
31.3667	chr11	65381323	65381877	+	0.0666667	NA	intron (NM_001278251, intron 4 of 9)	AluJo|SINE|Alu	371	NM_001300820	283130	Hs.661604	NM_182556	ENSG00000162241	SLC25A45	-	solute carrier family 25 member 45	protein-coding
21.0667	chr1	23019471	23019915	+	0.0666667	NA	exon (NM_001009999, exon 1 of 21)	exon (NM_001009999, exon 1 of 21)	225	NM_001009999	23028	Hs.591518	NM_015013	ENSG00000004487	KDM1A	AOF2|BHC110|CPRF|KDM1|LSD1	lysine demethylase 1A	protein-coding
20.4-8	chr20	10137563	10138105	+	0.0666667	NA	intron (NR_040710, intron 2 of 4)	intron (NR_040710, intron 2 of 4)	-80964	NM_001322910	6616	Hs.167317	NM_003081	ENSG00000132639	SNAP25	CMS18|RIC-4|RIC4|SEC9|SNAP|SNAP-25|SUP|bA416N4.2|dJ1068F16.2	synaptosome associated protein 25	protein-coding
9.86667	chr2	60165376	60165575	+	0.0666667	NA	Intergenic	LTR78|LTR|ERV1	217561	NR_132991	106660609	Hs.565545	NR_132991	ENSG00000228590	MIR4432HG	-	MIR4432 host gene	ncRNA
17.5667	chr10	96174545	96174910	+	0.0666667	NA	intron (NR_138482, intron 3 of 4)	L1M4b|LINE|L1	44105	NM_001330734	9849	Hs.600823	NM_014803	ENSG00000177853	ZNF518A	ZNF518	zinc finger protein 518A	protein-coding
13.5-12	chr5	153176809	153177128	+	0.0666667	NA	Intergenic	L1PA15|LINE|L1	-204619	NR_109877	101927134	Hs.531423	NR_109877	ENSG00000249484	LINC01470	-	long intergenic non-protein coding RNA 1470	ncRNA
22.4-20	chrX	130229008	130229662	+	0.0666667	NA	intron (NM_017666, intron 9 of 18)	intron (NM_017666, intron 9 of 18)	39564	NM_017666	55609	Hs.308418	NM_017666	ENSG00000056277	ZNF280C	SUHW3|ZNF633|ZPET	zinc finger protein 280C	protein-coding
17.1333-3	chr11	98154501	98154887	+	0.0666667	NA	Intergenic	L1MB8|LINE|L1	-866255	NM_014361	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding
16.0333-8	chr21	20829554	20829905	+	0.0666667	NA	Intergenic	Intergenic	-26621	NR_109788	387486	Hs.576551	NR_024090	ENSG00000224924	LINC00320	C21orf131|NCRNA00320|PRED14	long intergenic non-protein coding RNA 320	ncRNA
27-15	chr2	44924562	44925167	+	0.0666667	NA	intron (NR_147195, intron 1 of 1)	intron (NR_147195, intron 1 of 1)	14024	NR_147194	107985879	Hs.436392	NR_147194	ENSG00000259439	LINC01833	K21.1|RP11-89	long intergenic non-protein coding RNA 1833	ncRNA
13-8	chr5	90700672	90700979	+	0.0666667	NA	intron (NR_003149, intron 34 of 89)	intron (NR_003149, intron 34 of 89)	142028	NR_003149	84059	Hs.591777	NM_032119	ENSG00000164199	ADGRV1	FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b	adhesion G protein-coupled receptor V1	protein-coding
25.0333-5	chr15	53818640	53819156	+	0.0666667	NA	Intergenic	MER4D|LTR|ERV1	-56020	NR_102334	256764	Hs.122125	NM_182758	ENSG00000166415	WDR72	AI2A3	WD repeat domain 72	protein-coding
20.2667-9	chr7	5552132	5552632	+	0.0666667	NA	Intergenic	AluSz|SINE|Alu	-21781	NM_001101	60	Hs.520640	NM_001101	ENSG00000075624	ACTB	BRWS1|PS1TP5BP1	actin beta	protein-coding
12.6333-6	chr3	183892611	183892882	+	0.0666667	NA	Intergenic	Intergenic	5946	NR_039650	100616127		NR_039650	ENSG00000263932	MIR4448	-	microRNA 4448	ncRNA
10.4667	chr1	64018867	64019162	+	0.0666667	NA	intron (NM_005012, intron 2 of 8)	MER5B|DNA|hAT-Charlie	93191	NR_110666	101927034	Hs.680824	NR_110665	ENSG00000223949	ROR1-AS1	-	ROR1 antisense RNA 1	ncRNA
11.4667-3	chr10	80295225	80295451	+	0.0666667	NA	Intergenic	L1M4|LINE|L1	-5680	NM_000429	4143	Hs.282670	NM_000429	ENSG00000151224	MAT1A	MAT|MATA1|SAMS|SAMS1	methionine adenosyltransferase 1A	protein-coding
24.3667-4	chr19	7687173	7687722	+	0.0666667	NA	3' UTR (NM_174894, exon 2 of 2)	3' UTR (NM_174894, exon 2 of 2)	6614	NM_001042461	126003	Hs.432413	NM_174894	ENSG00000181029	TRAPPC5	TRS31	trafficking protein particle complex 5	protein-coding
9.53333-8	chr3	180261150	180261343	+	0.0666667	NA	Intergenic	L1MA1|LINE|L1	-152927	NR_132416	100505609	Hs.518427	NR_132416	ENSG00000241696	LINC02053	-	long intergenic non-protein coding RNA 2053	ncRNA
16.2333	chr1	59885929	59886380	+	0.0666667	NA	Intergenic	MER31B|LTR|ERV1	40619	NM_000775	1573	Hs.152096	NM_000775	ENSG00000134716	CYP2J2	CPJ2|CYPIIJ2	cytochrome P450 family 2 subfamily J member 2	protein-coding
17.8333-12	chr8	74758909	74759383	+	0.0666667	NA	TTS (NR_033830)	TTS (NR_033830)	53453	NR_031744	100302260		NR_031744	ENSG00000283188	MIR2052	hsa-mir-2052	microRNA 2052	ncRNA
23.5333-5	chr2	16151257	16151708	+	0.0666667	NA	Intergenic	L3|LINE|CR1	101055	NR_126559	104797537	Hs.435748	NR_126559	ENSG00000236289	GACAT3	LINC01458|lncRNA-AC130710	gastric cancer associated transcript 3	ncRNA
16.6667	chr1	156913933	156914296	+	0.0666667	NA	intron (NM_001080471, intron 22 of 22)	intron (NM_001080471, intron 22 of 22)	-6518	NM_144702	149499	Hs.491734	NM_144702	ENSG00000160838	LRRC71	C1orf92	leucine rich repeat containing 71	protein-coding
21.5666-4	chr6	75634364	75634967	+	0.0666667	NA	intron (NM_001100409, intron 4 of 22)	intron (NM_001100409, intron 4 of 22)	32785	NM_001100409	26054	Hs.485784	NM_015571	ENSG00000112701	SENP6	SSP1|SUSP1	SUMO specific peptidase 6	protein-coding
14.6-12	chr5	41894395	41894757	+	0.0666667	NA	Intergenic	Intergenic	-9768	NM_175921	285636	Hs.29899	NM_175921	ENSG00000205765	C5orf51	-	chromosome 5 open reading frame 51	protein-coding
6.86666-3	chrX	70394645	70394842	+	0.0666667	NA	intron (NM_012310, intron 20 of 30)	L1MEc|LINE|L1	-28288	NM_001171193	54857	Hs.438712	NM_017711	ENSG00000130055	GDPD2	GDE3|OBDPF	glycerophosphodiester phosphodiesterase domain containing 2	protein-coding
9.93334-4	chr8	19310063	19310212	+	0.0666667	NA	Intergenic	(CATACA)n|Simple_repeat|Simple_repeat	-3433	NM_001174160	63898	Hs.303208	NM_022071	ENSG00000104611	SH2D4A	PPP1R38|SH2A	SH2 domain containing 4A	protein-coding
8.69999	chr3	11999156	11999385	+	0.0666667	NA	Intergenic	Intergenic	-5090	NM_003178	6854	Hs.445503	NM_003178	ENSG00000157152	SYN2	SYNII	synapsin II	protein-coding
28.6667-5	chr2	226073250	226073816	+	0.0666667	NA	Intergenic	Intergenic	-69261	NR_046102	646736	Hs.712836	NR_046102		LOC646736	-	uncharacterized LOC646736	ncRNA
10.1-3	chr8	123544421	123544703	+	0.0666667	NA	Intergenic	Intergenic	-3356	NM_058229	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding
20.6667-6	chr12	62501116	62501691	+	0.0666667	NA	intron (NM_001278469, intron 6 of 35)	intron (NM_001278469, intron 6 of 35)	34577	NM_001278469	23041	Hs.389378	NM_015026	ENSG00000061987	MON2	-	MON2 homolog, regulator of endosome-to-Golgi trafficking	protein-coding
8.96666	chr2	69536141	69536384	+	0.0666667	NA	intron (NM_014911, intron 5 of 21)	intron (NM_014911, intron 5 of 21)	-16091	NR_003705	100124535	Hs.693447	NR_003705	ENSG00000207016	SNORA36C	-	small nucleolar RNA, H/ACA box 36C	snoRNA
28.2333-13	chr8	63772680	63773437	+	0.0666667	NA	intron (NR_038875, intron 1 of 2)	intron (NR_038875, intron 1 of 2)	3628	NR_038875	286184	Hs.586402	NR_038875	ENSG00000253734	LINC01289	-	long intergenic non-protein coding RNA 1289	ncRNA
12.7333	chr1	109980881	109981143	+	0.0666667	NA	Intergenic	Intergenic	-3753	NM_001242673	10768	Hs.743973	NM_006621	ENSG00000168710	AHCYL1	DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA	adenosylhomocysteinase like 1	protein-coding
12.8-6	chr8	82219732	82220059	+	0.0666667	NA	Intergenic	THE1D|LTR|ERVL-MaLR	-377609	NM_022133	64089	Hs.492121	NM_022133	ENSG00000104497	SNX16	-	sorting nexin 16	protein-coding
13.4667-3	chr19	39456722	39456986	+	0.0666667	NA	intron (NM_001111020, intron 3 of 29)	AluJb|SINE|Alu	11206	NM_003169	6829	Hs.631604	NM_003169	ENSG00000196235	SUPT5H	SPT5|SPT5H|Tat-CT1	SPT5 homolog, DSIF elongation factor subunit	protein-coding
11.5667-3	chr15	68596721	68597038	+	0.0666667	NA	intron (NM_006091, intron 1 of 11)	intron (NM_006091, intron 1 of 11)	17886	NM_006091	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding
14.6333-10	chr3	20233160	20233560	+	0.0666667	NA	Intergenic	Intergenic	-47127	NM_001012411	151648	Hs.105153	NM_138484	ENSG00000129810	SGO1	CAID|NY-BR-85|SGO|SGOL1	shugoshin 1	protein-coding
27.6-3	chr12	53922358	53923018	+	0.0666667	NA	Intergenic	Intergenic	-16143	NM_017410	3229	Hs.118608	NM_017410	ENSG00000123364	HOXC13	ECTD9|HOX3|HOX3G	homeobox C13	protein-coding
22.4333-5	chr12	54384113	54384663	+	0.0666667	NA	intron (NM_015481, intron 1 of 6)	intron (NM_015481, intron 1 of 6)	345	NM_015481	25946	Hs.505653	NM_015481	ENSG00000161642	ZNF385A	HZF|RZF|ZFP385|ZNF385	zinc finger protein 385A	protein-coding
23.7-5	chr2	8535212	8535835	+	0.0666667	NA	Intergenic	Intergenic	48269	NR_110257	101929567	Hs.634706	NR_110257	ENSG00000236008	LINC01814	-	long intergenic non-protein coding RNA 1814	ncRNA
15.7667-5	chr2	99630447	99630786	+	0.0666667	NA	intron (NM_001025108, intron 12 of 23)	THE1D|LTR|ERVL-MaLR	-140599	NR_135650	51455	Hs.443077	NM_016316	ENSG00000135945	REV1	AIBP80|REV1L	REV1 DNA directed polymerase	protein-coding
7.13333	chr3	79678830	79679027	+	0.0666667	NA	intron (NM_002941, intron 1 of 30)	intron (NM_002941, intron 1 of 30)	89070	NM_002941	6091	Hs.744218	NM_002941	ENSG00000169855	ROBO1	DUTT1|SAX3	roundabout guidance receptor 1	protein-coding
19.3-6	chr17	76133058	76133470	+	0.0666667	NA	Intergenic	Intergenic	-7292	NR_040017	100507218	Hs.654866	NR_040017	ENSG00000267128	RNF157-AS1	-	RNF157 antisense RNA 1	ncRNA
7.1	chr11	34794993	34795160	+	0.0666667	NA	Intergenic	L1ME2|LINE|L1	-121054	NM_001166158	8050	Hs.502315	NM_003477	ENSG00000110435	PDHX	DLDBP|E3BP|OPDX|PDHXD|PDX1|proX	pyruvate dehydrogenase complex component X	protein-coding
24.3333-3	chr14	40425833	40426311	+	0.0666667	NA	Intergenic	MER89|LTR|ERV1	-528639	NR_109757	644919	Hs.434414	NR_109757		LINC02315	-	long intergenic non-protein coding RNA 2315	ncRNA
8.06666	chr10	58838476	58838708	+	0.0666667	NA	Intergenic	MER45A|DNA|hAT-Tip100	123577	NR_027508	728640	Hs.729209	NR_027508		FAM133CP	-	family with sequence similarity 133, member A pseudogene	pseudo
25.6-10	chr8	95454232	95454655	+	0.0666667	NA	intron (NR_038207, intron 2 of 2)	MLT1A|LTR|ERVL-MaLR	-185242	NM_001363260	157657	Hs.548157	NM_177965	ENSG00000156172	C8orf37	BBS21|CORD16|RP64|smalltalk	chromosome 8 open reading frame 37	protein-coding
24.8	chr1	58943725	58944334	+	0.0666667	NA	Intergenic	Intergenic	-76447	NR_110626	101926925		NR_110626		LINC01358	-	long intergenic non-protein coding RNA 1358	ncRNA
24.9-3	chr11	30152439	30153053	+	0.0666667	NA	Intergenic	Intergenic	-78268	NM_001018080	2488	Hs.36975	NM_000510	ENSG00000131808	FSHB	HH24	follicle stimulating hormone subunit beta	protein-coding
34.6-3	chr10	53131191	53131907	+	0.0666667	NA	Intergenic	Intergenic	-359849	NM_000242	4153	Hs.499674	NM_000242	ENSG00000165471	MBL2	COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD	mannose binding lectin 2	protein-coding
19.5333-6	chr22	46055878	46056345	+	0.0666667	NA	intron (NR_027034, intron 1 of 2)	intron (NR_027034, intron 1 of 2)	2265	NR_027034	150381	Hs.659113	NR_027034		PRR34-AS1	-	PRR34 antisense RNA 1	ncRNA
26.6	chr1	111016048	111016530	+	0.0666667	NA	Intergenic	L1MA5A|LINE|L1	-52345	NM_001006945	55791	Hs.25245	NM_018372	ENSG00000121931	LRIF1	C1orf103|HBiX1|RIF1	ligand dependent nuclear receptor interacting factor 1	protein-coding
12.0667-8	chr2	229907437	229907685	+	0.0666667	NA	intron (NM_001348335, intron 1 of 5)	intron (NM_001348335, intron 1 of 5)	14118	NM_001348334	9320	Hs.572642	NM_004238	ENSG00000153827	TRIP12	MRD49|TRIP-12|ULF	thyroid hormone receptor interactor 12	protein-coding
13.8333-10	chr8	24905546	24905892	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-8042	NM_005382	4741	Hs.458657	NM_005382	ENSG00000104722	NEFM	NEF3|NF-M|NFM	neurofilament medium	protein-coding
17.1667-9	chr2	10840209	10840632	+	0.0666667	NA	Intergenic	L2c|LINE|L2	-2708	NM_001282705	10130	Hs.212102	NM_005742	ENSG00000143870	PDIA6	ERP5|P5|TXNDC7	protein disulfide isomerase family A member 6	protein-coding
9.46666-3	chr8	84485374	84485604	+	0.0666667	NA	intron (NM_001354308, intron 2 of 9)	AluSz|SINE|Alu	70005	NM_001354308	138046	Hs.121663	NM_173848	ENSG00000184672	RALYL	HNRPCL3	RALY RNA binding protein like	protein-coding
19.1333-3	chr17	61988485	61988868	+	0.0666667	NA	intron (NM_005121, intron 11 of 29)	intron (NM_005121, intron 11 of 29)	-60694	NM_001351695	57508	Hs.279646	NM_020748	ENSG00000108506	INTS2	INT2|KIAA1287	integrator complex subunit 2	protein-coding
10.5-6	chr6	12331328	12331589	+	0.0666667	NA	Intergenic	Intergenic	41097	NM_001168319	1906	Hs.511899	NM_001955	ENSG00000078401	EDN1	ARCND3|ET1|HDLCQ7|PPET1|QME	endothelin 1	protein-coding
11.3333-8	chr5	130259658	130259927	+	0.0666667	NA	Intergenic	L2c|LINE|L2	355327	NM_175856	337876	Hs.213137	NM_175856	ENSG00000198108	CHSY3	CHSY2|CSS3	chondroitin sulfate synthase 3	protein-coding
19.7667-10	chr6	46320490	46320971	+	0.0666667	NA	intron (NR_125838, intron 2 of 3)	L3b|LINE|CR1	5162	NM_005822	10231	Hs.440168	NM_005822	ENSG00000172348	RCAN2	CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4	regulator of calcineurin 2	protein-coding
19.6667	chr14	56734578	56735047	+	0.0666667	NA	Intergenic	Intergenic	70855	NM_001270525	5015	Hs.288655	NM_021728	ENSG00000165588	OTX2	CPHD6|MCOPS5	orthodenticle homeobox 2	protein-coding
26.1667-11	chr8	87181059	87181746	+	0.0666667	NA	intron (NM_173538, intron 4 of 10)	L1MC|LINE|L1	314987	NM_173538	168975	Hs.246284	NM_173538	ENSG00000176571	CNBD1	-	cyclic nucleotide binding domain containing 1	protein-coding
18.3667-14	chr8	121644497	121644933	+	0.0666667	NA	non-coding (NR_002835, exon 4 of 4)	non-coding (NR_002835, exon 4 of 4)	-3275	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding
20.3667-7	chr3	111973955	111974418	+	0.0666667	NA	intron (NM_001134437, intron 17 of 17)	MIRb|SINE|MIR	-4840	NR_073570	55347	Hs.477115	NM_018394	ENSG00000144827	ABHD10	-	abhydrolase domain containing 10	protein-coding
13.1667-5	chr14	80070093	80070356	+	0.0666667	NA	Intergenic	Intergenic	-141195	NR_038355	100628307	Hs.623865	NR_038355	ENSG00000258766	DIO2-AS1	-	DIO2 antisense RNA 1	ncRNA
16.0667-5	chr13	112960431	112960761	+	0.0666667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	8042	NR_034002	100289410	Hs.667436	NR_034002		MCF2L-AS1	-	MCF2L antisense RNA 1	ncRNA
24.3333-10	chr6	154455568	154455934	+	0.0666667	NA	intron (NM_001368117, intron 1 of 12)	intron (NM_001368117, intron 1 of 12)	-21678	NM_001368119	154043	Hs.16064	NM_173515	ENSG00000153721	CNKSR3	CNK3|CNK3/IPCEF1|MAGI1	CNKSR family member 3	protein-coding
20.1333-10	chr2	39411307	39411883	+	0.0666667	NA	intron (NM_003618, intron 1 of 33)	intron (NM_003618, intron 1 of 33)	25690	NM_003618	8491	Hs.655750	NM_003618	ENSG00000011566	MAP4K3	GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1	mitogen-activated protein kinase kinase kinase kinase 3	protein-coding
22.9-7	chr17	75377263	75377869	+	0.0666667	NA	intron (NM_002086, intron 2 of 5)	AluJr|SINE|Alu	28112	NM_002086	2885	Hs.444356	NM_002086	ENSG00000177885	GRB2	ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2	growth factor receptor bound protein 2	protein-coding
17.2-9	chr6	165169238	165169586	+	0.0666667	NA	Intergenic	MSTA|LTR|ERVL-MaLR	140193	NM_144980	168090	Hs.144734	NM_144980	ENSG00000112539	C6orf118	bA85G2.1|dJ416F21.2	chromosome 6 open reading frame 118	protein-coding
15.8333-11	chr3	120023775	120024156	+	0.0666667	NA	intron (NM_002093, intron 1 of 11)	intron (NM_002093, intron 1 of 11)	60683	NR_162125	113839522		NR_162125		MIR6529	-	microRNA 6529	ncRNA
12.8-2	chr1	48237287	48237646	+	0.0666667	NA	intron (NM_001135181, intron 11 of 14)	intron (NM_001135181, intron 11 of 14)	14750	NM_001011547	200010	Hs.37890	NM_001011547	ENSG00000117834	SLC5A9	SGLT4	solute carrier family 5 member 9	protein-coding
12.8-4	chr6	147814027	147814341	+	0.0666667	NA	Intergenic	Intergenic	305494	NM_001030060	389432	Hs.567973	NM_001030060	ENSG00000203727	SAMD5	dJ875H10.1	sterile alpha motif domain containing 5	protein-coding
13.5-9	chr5	8814320	8814706	+	0.0666667	NA	Intergenic	Intergenic	-25219	NR_109932	101929284	Hs.403715	NR_109932		LINC02199	-	long intergenic non-protein coding RNA 2199	ncRNA
25.8333-3	chr12	65905284	65905726	+	0.0666667	NA	intron (NM_001300918, intron 3 of 4)	intron (NM_001300918, intron 3 of 4)	-23180	NR_158984	100129940	Hs.685856	NR_120478	ENSG00000197301	HMGA2-AS1	-	HMGA2 antisense RNA 1	ncRNA
19.9667-15	chr8	137505219	137505670	+	0.0666667	NA	Intergenic	MLT1J2|LTR|ERVL-MaLR	-91856	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
28.5-4	chr2	36159099	36159615	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	196213	NR_037631	100288911	Hs.432924	NR_037631		CRIM1-DT	-	CRIM1 divergent transcript	ncRNA
15.1-8	chr3	146419418	146419764	+	0.0666667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	49710	NM_001199978	57047	Hs.744414	NM_020359	ENSG00000163746	PLSCR2	-	phospholipid scramblase 2	protein-coding
25.2333-8	chr2	60988022	60988465	+	0.0666667	NA	intron (NM_144709, intron 4 of 17)	intron (NM_144709, intron 4 of 17)	28969	NM_001322124	150962	Hs.368348	NM_144709	ENSG00000162927	PUS10	CCDC139|DOBI	pseudouridine synthase 10	protein-coding
8.9-7	chrX	47817429	47817577	+	0.0666667	NA	Intergenic	LTR43|LTR|ERV1	-19399	NM_007137	347344	Hs.114246	NM_007137	ENSG00000197779	ZNF81	HFZ20|MRX45|dJ54B20.6	zinc finger protein 81	protein-coding
23.7667-4	chr12	6488014	6488414	+	0.0666667	NA	Intergenic	L2c|LINE|L2	5048	NM_016497	51258	Hs.55847	NM_016497	ENSG00000111639	MRPL51	CDA09|HSPC241|MRP64|bMRP64	mitochondrial ribosomal protein L51	protein-coding
16.6333-3	chr16	51996247	51996582	+	0.0666667	NA	Intergenic	Intergenic	77521	NM_001242473	388276	Hs.534669	NM_001242473		C16orf97	-	chromosome 16 open reading frame 97	protein-coding
13.1333-3	chr10	61923586	61923922	+	0.0666667	NA	intron (NM_032199, intron 2 of 9)	intron (NM_032199, intron 2 of 9)	22055	NM_032199	84159	Hs.535297	NM_032199	ENSG00000150347	ARID5B	DESRT|MRF-2|MRF2	AT-rich interaction domain 5B	protein-coding
13.8-2	chr2	19280983	19281287	+	0.0666667	NA	Intergenic	L2a|LINE|L2	-67294	NR_039914	100616307		NR_039914	ENSG00000266738	MIR4757	-	microRNA 4757	ncRNA
10.9667-3	chr4	49104321	49104591	+	0.0666667	NA	Intergenic	(CATTC)n|Satellite|Satellite	117814	NM_001286791	80157	Hs.479703	NM_025087	ENSG00000109182	CWH43	CWH43-C|PGAP2IP	cell wall biogenesis 43 C-terminal homolog	protein-coding
18.7667-7	chr14	68317887	68318263	+	0.0666667	NA	intron (NM_133509, intron 8 of 10)	intron (NM_133509, intron 8 of 10)	310712	NR_135816	100996664		NR_135816		LOC100996664	-	uncharacterized LOC100996664	ncRNA
10.2333	chr11	47997741	47997953	+	0.0666667	NA	intron (NM_001098503, intron 1 of 8)	intron (NM_001098503, intron 1 of 8)	17288	NM_002843	5795	Hs.318547	NM_002843	ENSG00000149177	PTPRJ	CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1	protein tyrosine phosphatase receptor type J	protein-coding
26.7667-7	chr16	50975120	50975755	+	0.0666667	NA	intron (NR_039672, intron 2 of 6)	intron (NR_039672, intron 2 of 6)	-42321	NR_110913	101927334	Hs.555184	NR_110913	ENSG00000261637	LINC02127	-	long intergenic non-protein coding RNA 2127	ncRNA
19.4	chr1	38899999	38900517	+	0.0666667	NA	intron (NM_001304746, intron 4 of 7)	AluSx|SINE|Alu	-18632	NR_037636	100527950	Hs.591506	NR_037633		GJA9-MYCBP	Cx58|Cx59|GJA10|GJA9	GJA9-MYCBP readthrough	ncRNA
13.9667-3	chr16	87021015	87021374	+	0.0666667	NA	Intergenic	L1MC5|LINE|L1	-36590	NR_126008	440390	Hs.513789	NR_126008	ENSG00000232190	LINC02181	-	long intergenic non-protein coding RNA 2181	ncRNA
26.2-10	chr2	80108762	80109314	+	0.0666667	NA	intron (NM_001282598, intron 7 of 17)	intron (NM_001282598, intron 7 of 17)	195714	NM_178839	347730	Hs.591580	NM_178839	ENSG00000162951	LRRTM1	-	leucine rich repeat transmembrane neuronal 1	protein-coding
24.1-5	chr2	204024684	204025212	+	0.0666667	NA	Intergenic	Intergenic	88200	NM_012092	29851	Hs.56247	NM_012092	ENSG00000163600	ICOS	AILIM|CD278|CVID1	inducible T cell costimulator	protein-coding
18.3667-4	chr16	79258069	79258508	+	0.0666667	NA	Intergenic	Intergenic	342449	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding
12.7667-2	chr19	24336783	24337120	+	0.0666667	NA	Intergenic	ALR/Alpha|Satellite|centr	-173504	NR_003603	100101266	Hs.149312	NR_003603	ENSG00000268442	HAVCR1P1	-	hepatitis A virus cellular receptor 1 pseudogene 1	pseudo
6.7-2	chr18	7464689	7464810	+	0.0666667	NA	Intergenic	Intergenic	-3743	NM_001364581	112577592		NM_001364581		LOC112577592	-	uncharacterized LOC112577592	protein-coding
20.4333	chr11	108256150	108256497	+	0.0666667	NA	exon (NM_000051, exon 14 of 63)	exon (NM_000051, exon 14 of 63)	32794	NM_001351836	472	Hs.367437	NM_000051	ENSG00000149311	ATM	AT1|ATA|ATC|ATD|ATDC|ATE|TEL1|TELO1	ATM serine/threonine kinase	protein-coding
23.6333-3	chr10	52674629	52675098	+	0.0666667	NA	intron (NR_155748, intron 1 of 2)	MIR|SINE|MIR	80541	NR_155748	105378305	Hs.257871	NR_155748		LOC105378305	-	uncharacterized LOC105378305	ncRNA
25.1-11	chr3	19333322	19333860	+	0.0666667	NA	intron (NM_144633, intron 3 of 15)	intron (NM_144633, intron 3 of 15)	-18660	NR_039954	100616291		NR_039954	ENSG00000271898	MIR4791	mir-4791	microRNA 4791	ncRNA
8.93333-2	chr19	28381912	28382101	+	0.0666667	NA	Intergenic	Intergenic	-224682	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA
6.86666	chr3	129035760	129035942	+	0.0666667	NA	intron (NM_024768, intron 5 of 7)	MIR|SINE|MIR	-24916	NM_000174	2815	Hs.1144	NM_000174	ENSG00000169704	GP9	CD42a|GPIX	glycoprotein IX platelet	protein-coding
10.1333-3	chr11	79026481	79026658	+	0.0666667	NA	intron (NM_001098816, intron 6 of 33)	intron (NM_001098816, intron 6 of 33)	375540	NR_030598	100126333		NR_030598	ENSG00000211997	MIR708	MIRN708|hsa-mir-708	microRNA 708	ncRNA
16.4333-5	chr4	181713257	181713632	+	0.0666667	NA	Intergenic	Intergenic	116529	NR_147188	105377573	Hs.333288	NR_147188	ENSG00000251336	TEMN3-AS1	-	TENM3 antisense transcript 1	ncRNA
16.3333-3	chr13	94857041	94857474	+	0.0666667	NA	intron (NR_110754, intron 2 of 4)	intron (NR_110754, intron 2 of 4)	96316	NR_110754	101927284	Hs.551673	NR_110754		LOC101927284	-	uncharacterized LOC101927284	ncRNA
16.2667-9	chr4	141618845	141619177	+	0.0666667	NA	Intergenic	AluSq|SINE|Alu	-17572	NR_037840	3600	Hs.168132	NM_000585	ENSG00000164136	IL15	IL-15	interleukin 15	protein-coding
23.8333-9	chr7	40744872	40745536	+	0.0666667	NA	intron (NM_024728, intron 13 of 14)	intron (NM_024728, intron 13 of 14)	234735	NR_110831	101928744	Hs.639767	NR_110831	ENSG00000232458	LINC01450	-	long intergenic non-protein coding RNA 1450	ncRNA
17.5667-7	chr2	30939143	30939622	+	0.0666667	NA	intron (NM_024572, intron 9 of 14)	intron (NM_024572, intron 9 of 14)	-131936	NM_144575	92291	Hs.660911	NM_144575	ENSG00000162949	CAPN13	-	calpain 13	protein-coding
16.1667-10	chr2	25584116	25584550	+	0.0666667	NA	intron (NM_001320935, intron 4 of 17)	Charlie1a|DNA|hAT-Charlie	65889	NM_001256308	1838	Hs.307720	NM_021907	ENSG00000138101	DTNB	-	dystrobrevin beta	protein-coding
12.4333-11	chr5	5056356	5056654	+	0.0666667	NA	intron (NR_026994, intron 2 of 6)	MLT1H|LTR|ERVL-MaLR	21806	NR_134266	105374631	Hs.570964	NR_134266	ENSG00000250529	LINC02121	-	long intergenic non-protein coding RNA 2121	ncRNA
23.2667-9	chr6	1041254	1041872	+	0.0666667	NA	intron (NR_027116, intron 1 of 3)	L1MB3|LINE|L1	59769	NR_027116	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA
24.5-15	chr7	35774058	35774698	+	0.0666667	NA	intron (NR_120511, intron 3 of 5)	L1MC3|LINE|L1	26247	NR_120512	101928545	Hs.648103	NR_120511		SEPTIN7-AS1	SEPT7-AS1	SEPT7 antisense RNA 1 (head to head)	ncRNA
28.2-8	chr17	59729150	59729876	+	0.0666667	NA	intron (NM_001329394, intron 1 of 11)	L1MB3|LINE|L1	21859	NM_030938	81671	Hs.444569	NM_030938	ENSG00000062716	VMP1	EPG3|TANGO5|TMEM49	vacuole membrane protein 1	protein-coding
8.9-3	chr17	19405759	19405917	+	0.0666667	NA	Intergenic	Intergenic	-5394	NM_007148	7732	Hs.189482	NM_007148	ENSG00000128482	RNF112	BFP|ZNF179	ring finger protein 112	protein-coding
25.8-21	chr6	153684514	153685136	+	0.0666667	NA	Intergenic	Intergenic	-325671	NM_001145281	4988	Hs.2353	NM_000914	ENSG00000112038	OPRM1	LMOR|M-OR-1|MOP|MOR|MOR1|OPRM	opioid receptor mu 1	protein-coding
22.5333-7	chr13	106266773	106267236	+	0.0666667	NA	Intergenic	Intergenic	-109560	NR_034119	728192	Hs.559194	NR_034119		LINC00460	-	long intergenic non-protein coding RNA 460	ncRNA
13.1667-6	chr19	44763983	44764332	+	0.0666667	NA	Intergenic	G-rich|Low_complexity|Low_complexity	5500	NR_107052	102465879		NR_107052	ENSG00000284258	MIR8085	hsa-mir-8085	microRNA 8085	ncRNA
28.6333	chr1	92659197	92659652	+	0.0666667	NA	intron (NM_005665, intron 11 of 17)	L1PB4|LINE|L1	125684	NM_001350197	7813	Hs.594434	NM_005665	ENSG00000067208	EVI5	EVI-5|NB4S	ecotropic viral integration site 5	protein-coding
10.5667-2	chr20	8703892	8704050	+	0.0666667	NA	intron (NM_182734, intron 11 of 32)	intron (NM_182734, intron 11 of 32)	-127214	NR_004386	26767		NR_004386	ENSG00000201348	RNU105B	105B|E1-2	RNA, U105B small nucleolar	snoRNA
27.4-18	chr8	91727104	91727571	+	0.0666667	NA	Intergenic	L1PA3|LINE|L1	290343	NM_175636	862	Hs.368431	NM_004349	ENSG00000079102	RUNX1T1	AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2	RUNX1 partner transcriptional co-repressor 1	protein-coding
4.7	chr8	129986017	129986087	+	0.0666667	NA	intron (NM_001353245, intron 1 of 13)	MamRep38|DNA|hAT	22401	NR_049826	100847051		NR_049826	ENSG00000264653	MIR5194	mir-5194	microRNA 5194	ncRNA
9.83332	chr14	99929095	99929376	+	0.0666667	NA	intron (NM_004434, intron 17 of 21)	intron (NM_004434, intron 17 of 21)	-42187	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding
20.1333-15	chr6	94057653	94058147	+	0.0666667	NA	Intergenic	AluJr4|SINE|Alu	339597	NR_152795	643432	Hs.509936	NR_015362		TSG1	-	tumor suppressor TSG1	ncRNA
12.5-5	chr22	19442633	19442968	+	0.0666667	NA	TTS (NM_173793)	TTS (NM_173793)	5432	NM_001166242	128977	Hs.659565	NM_173793	ENSG00000242259	C22orf39	-	chromosome 22 open reading frame 39	protein-coding
20.8-16	chr6	79464075	79464655	+	0.0666667	NA	Intergenic	Intergenic	73065	NM_001122769	167691	Hs.21945	NM_181714	ENSG00000135338	LCA5	C6orf152	lebercilin LCA5	protein-coding
15.4667-7	chr14	31949786	31950173	+	0.0666667	NA	intron (NR_146544, intron 1 of 1)	intron (NR_146544, intron 1 of 1)	5126	NR_146544	105370439		NR_146544	ENSG00000258474	LINC02313	-	long intergenic non-protein coding RNA 2313	ncRNA
7.5-4	chr5	74079724	74079836	+	0.0666667	NA	Intergenic	Intergenic	228545	NR_105009	102503429	Hs.519391	NR_105009	ENSG00000248942	LINC01335	-	long intergenic non-protein coding RNA 1335	ncRNA
8-2	chr8	74734947	74735132	+	0.0666667	NA	intron (NR_033830, intron 4 of 5)	MIR|SINE|MIR	29346	NR_031744	100302260		NR_031744	ENSG00000283188	MIR2052	hsa-mir-2052	microRNA 2052	ncRNA
8.53333-3	chr2	47941673	47941903	+	0.0666667	NA	Intergenic	Intergenic	-35995	NM_001190274	80204	Hs.352677	NM_012167	ENSG00000138081	FBXO11	FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1	F-box protein 11	protein-coding
20.4333-12	chrX	79845039	79845567	+	0.0666667	NA	Intergenic	Intergenic	-169450	NM_001109879	50945	Hs.374253	NM_016954	ENSG00000122145	TBX22	ABERS|CLPA|CPX|TBXX|dJ795G23.1	T-box transcription factor 22	protein-coding
27.4-23	chrX	5388279	5389079	+	0.0666667	NA	Intergenic	Intergenic	-755107	NR_110390	101928201	Hs.586488	NR_110390	ENSG00000236513	LOC101928201	-	uncharacterized LOC101928201	ncRNA
20.3667-11	chr8	137159498	137160041	+	0.0666667	NA	Intergenic	MER113|DNA|hAT-Charlie	253819	NR_125428	101927915	Hs.695851	NR_125428		LOC101927915	-	uncharacterized LOC101927915	ncRNA
12.4667-4	chr4	20141454	20141699	+	0.0666667	NA	Intergenic	L1PA7|LINE|L1	-110329	NM_004787	9353	Hs.29802	NM_004787	ENSG00000145147	SLIT2	SLIL3|Slit-2	slit guidance ligand 2	protein-coding
21.8-19	chr9	27376458	27376911	+	0.0666667	NA	intron (NM_024761, intron 2 of 3)	MER5B|DNA|hAT-Charlie	-79534	NM_020641	54586	Hs.163070	NM_020641	ENSG00000120160	EQTN	AFAF|C9orf11|SPACA8	equatorin	protein-coding
36.8667-9	chrX	123437015	123437667	+	0.0666667	NA	intron (NM_007325, intron 12 of 15)	L2a|LINE|L2	253063	NM_001256743	2892	Hs.377070	NM_000828	ENSG00000125675	GRIA3	GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94	glutamate ionotropic receptor AMPA type subunit 3	protein-coding
17.3667-14	chr7	155869088	155869424	+	0.0666667	NA	Intergenic	Intergenic	-56793	NM_000193	6469	Hs.164537	NM_000193	ENSG00000164690	SHH	HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS	sonic hedgehog signaling molecule	protein-coding
27.5-5	chr4	31833283	31833855	+	0.0666667	NA	Intergenic	Intergenic	-163810	NR_125936	102723828	Hs.575118	NR_125936	ENSG00000251129	LINC02506	-	long intergenic non-protein coding RNA 2506	ncRNA
10.3667-6	chr2	211341339	211341582	+	0.0666667	NA	Intergenic	Intergenic	723889	NR_002763	29034	Hs.658398	NR_002763	ENSG00000280837	CPS1-IT1	CPS1-IT|CPS1IT|CPS1IT1|PRO0132	CPS1 intronic transcript 1	ncRNA
13.7667-4	chr7	86314344	86314721	+	0.0666667	NA	Intergenic	Intergenic	-329377	NM_001363522	2913	Hs.590575	NM_000840	ENSG00000198822	GRM3	GLUR3|GPRC1C|MGLUR3|mGlu3	glutamate metabotropic receptor 3	protein-coding
21.8333-3	chr19	44427922	44428521	+	0.0666667	NA	non-coding (NR_103551, exon 6 of 6)	non-coding (NR_103551, exon 6 of 6)	20251	NM_014518	7772	Hs.709348	NM_014518	ENSG00000278318	ZNF229	-	zinc finger protein 229	protein-coding
19.9-5	chr11	73077339	73077889	+	0.0666667	NA	intron (NM_014824, intron 3 of 19)	L1ME1|LINE|L1	64704	NM_014824	9873	Hs.744959	NM_014824	ENSG00000137478	FCHSD2	NWK|NWK1|SH3MD3	FCH and double SH3 domains 2	protein-coding
5.1-2	chr8	24105909	24105987	+	0.0666667	NA	Intergenic	Intergenic	-188092	NR_130709	10863	Hs.174030	NM_014265	ENSG00000042980	ADAM28	ADAM 28|MDC-L|MDCL|eMDC II|eMDCII	ADAM metallopeptidase domain 28	protein-coding
15.2333-7	chr4	159212870	159213260	+	0.0666667	NA	intron (NM_001351724, intron 4 of 30)	intron (NM_001351724, intron 4 of 30)	-14567	NM_001351726	9693	Hs.744884	NM_014247	ENSG00000109756	RAPGEF2	CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP	Rap guanine nucleotide exchange factor 2	protein-coding
21.7333-9	chr4	182280868	182281368	+	0.0666667	NA	intron (NM_001080477, intron 1 of 27)	intron (NM_001080477, intron 1 of 27)	37716	NM_001080477	55714	Hs.130438	NM_001080477	ENSG00000218336	TENM3	MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3	teneurin transmembrane protein 3	protein-coding
11.9333	chr1	111910011	111910349	+	0.0666667	NA	non-coding (NR_046619, exon 3 of 4)	non-coding (NR_046619, exon 3 of 4)	523	NR_046619	100873995	Hs.535274	NR_046619	ENSG00000237556	KCND3-AS1	-	KCND3 antisense RNA 1	ncRNA
6.96667-4	chr9	132861407	132861526	+	0.0666667	NA	intron (NM_001317959, intron 5 of 14)	intron (NM_001317959, intron 5 of 14)	-16878	NM_001316898	11092	Hs.62595	NM_018956	ENSG00000165698	SPACA9	C9orf9|Mast	sperm acrosome associated 9	protein-coding
13.8333-4	chr15	75411800	75412066	+	0.0666667	NA	intron (NM_015477, intron 5 of 20)	intron (NM_015477, intron 5 of 20)	39757	NM_015477	25942	Hs.513039	NM_015477	ENSG00000169375	SIN3A	WITKOS	SIN3 transcription regulator family member A	protein-coding
25.6333-11	chr7	3439251	3439754	+	0.0666667	NA	intron (NM_152744, intron 1 of 44)	L4_A_Mam|LINE|RTE-X	138250	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding
14.2667-10	chr6	123961245	123961619	+	0.0666667	NA	intron (NM_001040214, intron 1 of 6)	intron (NM_001040214, intron 1 of 6)	157567	NM_001040214	154215	Hs.656604	NM_153355	ENSG00000188580	NKAIN2	FAM77B|NKAIP2|TCBA|TCBA1	sodium/potassium transporting ATPase interacting 2	protein-coding
22.5333	chr1	212027349	212027854	+	0.0666667	NA	intron (NM_015434, intron 1 of 19)	intron (NM_015434, intron 1 of 19)	-7952	NM_001286229	51514	Hs.656473	NM_016448	ENSG00000143476	DTL	CDT2|DCAF2|L2DTL|RAMP	denticleless E3 ubiquitin protein ligase homolog	protein-coding
11.0667-6	chr9	86514816	86515059	+	0.0666667	NA	Intergenic	Intergenic	-160527	NM_001185074	79670	Hs.597057	NM_024617	ENSG00000083223	TUT7	PAPD6|TENT3B|ZCCHC6	terminal uridylyl transferase 7	protein-coding
18.5667-14	chr9	111704717	111705252	+	0.0666667	NA	intron (NM_173521, intron 19 of 25)	L1M5|LINE|L1	43379	NM_001017998	2790	Hs.534196	NM_001017998	ENSG00000242616	GNG10	-	G protein subunit gamma 10	protein-coding
22.9-6	chr14	66831839	66832362	+	0.0666667	NA	intron (NM_001024218, intron 4 of 21)	AluSx3|SINE|Alu	324693	NM_001024218	10243	Hs.208765	NM_020806	ENSG00000171723	GPHN	GEPH|GPH|GPHRYN|HKPX1|MOCODC	gephyrin	protein-coding
8.23334	chr10	17082312	17082454	+	0.0666667	NA	intron (NM_001081, intron 17 of 66)	intron (NM_001081, intron 17 of 66)	47434	NM_001081	8029	Hs.166206	NM_001081	ENSG00000107611	CUBN	IFCR|MGA1|gp280	cubilin	protein-coding
6.33334-2	chr12	99440977	99441072	+	0.0666667	NA	intron (NM_152788, intron 11 of 25)	intron (NM_152788, intron 11 of 25)	-206729	NM_153364	196472	Hs.591011	NM_153364	ENSG00000180219	FAM71C	-	family with sequence similarity 71 member C	protein-coding
26.1-14	chr7	33123865	33124606	+	0.0666667	NA	Intergenic	MER101-int|LTR|ERV1	-5050	NR_145412	27241	Hs.372360	NM_014451	ENSG00000122507	BBS9	B1|C18|D1|PTHB1	Bardet-Biedl syndrome 9	protein-coding
23.3-9	chr3	126532562	126533166	+	0.0666667	NA	intron (NR_130715, intron 4 of 5)	L1MB7|LINE|L1	8709	NM_152889	166012	Hs.292375	NM_152889	ENSG00000180767	CHST13	C4ST3	carbohydrate sulfotransferase 13	protein-coding
30.4-9	chr4	48322046	48322663	+	0.0666667	NA	Intergenic	Intergenic	-19175	NM_020846	57606	Hs.479677	NM_020846	ENSG00000109171	SLAIN2	KIAA1458	SLAIN motif family member 2	protein-coding
2.66666	chr8	73568046	73568122	+	0.0666667	NA	intron (NM_001164384, intron 10 of 10)	intron (NM_001164384, intron 10 of 10)	148010	NR_038406	100128126	Hs.679921	NR_038406	ENSG00000253302	STAU2-AS1	-	STAU2 antisense RNA 1	ncRNA
9.13333-5	chr8	32272063	32272311	+	0.0666667	NA	intron (NM_013962, intron 1 of 4)	MLT1A|LTR|ERVL-MaLR	-168559	NR_047475	100874286	Hs.147060	NR_047475	ENSG00000254049	NRG1-IT3	-	NRG1 intronic transcript 3	ncRNA
22.5667-2	chr12	88726353	88726887	+	0.0666667	NA	Intergenic	Intergenic	-146147	NM_003994	4254	Hs.1048	NM_000899	ENSG00000049130	KITLG	DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF	KIT ligand	protein-coding
25.0333-8	chr21	43699976	43700695	+	0.0666667	NA	Intergenic	Intergenic	-18794	NM_003681	8566	Hs.284491	NM_003681	ENSG00000160209	PDXK	C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79	pyridoxal kinase	protein-coding
9.33333	chr12	2723635	2723884	+	0.0666667	NA	Intergenic	Intergenic	-32602	NR_045725	100652846	Hs.683896	NR_045725	ENSG00000246627	CACNA1C-AS1	-	CACNA1C antisense RNA 1	ncRNA
19.0333	chr1	28883766	28884237	+	0.0666667	NA	Intergenic	Intergenic	-3090	NM_001166005	2035	Hs.175437	NM_004437	ENSG00000159023	EPB41	4.1R|EL1|HE	erythrocyte membrane protein band 4.1	protein-coding
11-4	chr2	117120294	117120497	+	0.0666667	NA	Intergenic	L1MA3|LINE|L1	-694296	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	Has1|MrDb	DEAD-box helicase 18	protein-coding
26.6-5	chr10	44507798	44508356	+	0.0666667	NA	Intergenic	Intergenic	-122980	NM_001178134	6387	Hs.522891	NM_000609	ENSG00000107562	CXCL12	IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1	C-X-C motif chemokine ligand 12	protein-coding
23.4667-9	chr6	112136129	112136629	+	0.0666667	NA	intron (NM_001105206, intron 24 of 38)	intron (NM_001105206, intron 24 of 38)	48788	NM_001033564	619208	Hs.591340	NM_001033564	ENSG00000203778	FAM229B	C6orf225	family with sequence similarity 229 member B	protein-coding
19.0666-2	chr3	165615408	165615965	+	0.0666667	NA	Intergenic	Intergenic	221737	NR_137636	590	Hs.420483	NM_000055	ENSG00000114200	BCHE	BCHED|CHE1|CHE2|E1	butyrylcholinesterase	protein-coding
30.3667-10	chr5	150626463	150627154	+	0.0666667	NA	intron (NM_001166208, intron 2 of 2)	intron (NM_001166208, intron 2 of 2)	9164	NM_001166209	11346	Hs.435228	NM_007286	ENSG00000171992	SYNPO	-	synaptopodin	protein-coding
25.9333-5	chr6	62359490	62360222	+	0.0666667	NA	Intergenic	Intergenic	-73629	NR_146870	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
12.4333-12	chr5	51365674	51365870	+	0.0666667	NA	Intergenic	Intergenic	17560	NR_046243	642366	Hs.544139	NR_046243		LOC642366	-	uncharacterized LOC642366	ncRNA
6.56667-2	chr5	11694427	11694525	+	0.0666667	NA	intron (NM_001288717, intron 2 of 20)	Tigger17a|DNA|TcMar-Tigger	-105410	NM_001364128	1501	Hs.314543	NM_001332	ENSG00000169862	CTNND2	GT24|NPRAP	catenin delta 2	protein-coding
7.06666-2	chr13	70724989	70725179	+	0.0666667	NA	Intergenic	Intergenic	-290057	NR_047699	100885781	Hs.372660	NR_047699	ENSG00000226846	LINC00348	-	long intergenic non-protein coding RNA 348	ncRNA
20.5-6	chr19	12282723	12283258	+	0.0666667	NA	intron (NM_001353552, intron 1 of 3)	LTR44|LTR|ERV1	11622	NM_001353551	51710	Hs.296731	NM_016264	ENSG00000197857	ZNF44	GIOT-2|KOX7|ZNF|ZNF504|ZNF55|ZNF58	zinc finger protein 44	protein-coding
13.4-9	chr8	79408369	79408756	+	0.0666667	NA	Intergenic	Intergenic	76374	NR_162137	113219456		NR_162137		MIR12123	-	microRNA 12123	ncRNA
16.4667-11	chr7	55252004	55252389	+	0.0666667	NA	intron (NR_110426, intron 2 of 3)	intron (NR_110426, intron 2 of 3)	3439	NR_110426	102725541	Hs.590524	NR_110426		ELDR	Fabl|LINC01156	EGFR long non-coding downstream RNA	ncRNA
14.9333-15	chr3	177083224	177083461	+	0.0666667	NA	intron (NM_001321194, intron 2 of 16)	intron (NM_001321194, intron 2 of 16)	113136	NM_001321193	79718	Hs.714201	NM_024665	ENSG00000177565	TBL1XR1	C21|DC42|IRA1|MRD41|TBLR1	transducin beta like 1 X-linked receptor 1	protein-coding
3.63334	chr8	71651295	71651349	+	0.0666667	NA	Intergenic	Intergenic	-103228	NM_001370336	2138	Hs.444971	NM_000503	ENSG00000104313	EYA1	BOP|BOR|BOS1|OFC1	EYA transcriptional coactivator and phosphatase 1	protein-coding
19.8667-14	chr7	159067917	159068379	+	0.0666667	NA	intron (NR_130758, intron 4 of 12)	intron (NR_130758, intron 4 of 12)	29056	NM_001308259	7434	Hs.585052	NM_003382	ENSG00000106018	VIPR2	C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R	vasoactive intestinal peptide receptor 2	protein-coding
6.46666	chr15	58050612	58050767	+	0.0666667	NA	intron (NM_170696, intron 1 of 11)	intron (NM_170696, intron 1 of 11)	-14536	NR_147215	283665	Hs.638961	NR_147215		LOC283665	-	uncharacterized LOC283665	ncRNA
20.2333-7	chr2	63663439	63663998	+	0.0666667	NA	Intergenic	Intergenic	74567	NM_001199112	4190	Hs.526521	NM_005917	ENSG00000014641	MDH1	HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2	malate dehydrogenase 1	protein-coding
14.9333-18	chr6	132298806	132299145	+	0.0666667	NA	intron (NM_015529, intron 10 of 11)	L1PA16|LINE|L1	102500	NM_015529	26002	Hs.6909	NM_015529	ENSG00000079931	MOXD1	MOX|PRO5780|dJ248E1.1	monooxygenase DBH like 1	protein-coding
16.3667-6	chr21	28963699	28964163	+	0.0666667	NA	intron (NM_001320766, intron 10 of 28)	Tigger1|DNA|TcMar-Tigger	28946	NM_001320766	26046	Hs.288773	NM_015565	ENSG00000198862	LTN1	C21orf10|C21orf98|RNF160|ZNF294	listerin E3 ubiquitin protein ligase 1	protein-coding
20.9-22	chr7	36184615	36185126	+	0.0666667	NA	intron (NM_030636, intron 2 of 7)	AluSz|SINE|Alu	31616	NM_030636	80820	Hs.487994	NM_030636	ENSG00000122547	EEPD1	HSPC107	endonuclease/exonuclease/phosphatase family domain containing 1	protein-coding
18-3	chr1	118072955	118073467	+	0.0666667	NA	intron (NM_206996, intron 17 of 48)	MIR|SINE|MIR	112017	NM_206996	200162	Hs.528821	NM_206996	ENSG00000155761	SPAG17	CT143|PF6	sperm associated antigen 17	protein-coding
24.3667	chr1	67219370	67219852	+	0.0666667	NA	exon (NM_144701, exon 7 of 11)	exon (NM_144701, exon 7 of 11)	53157	NM_144701	149233	Hs.677426	NM_144701	ENSG00000162594	IL23R	-	interleukin 23 receptor	protein-coding
5.76666	chr18	65857535	65857671	+	0.0666667	NA	intron (NM_001362438, intron 7 of 11)	intron (NM_001362438, intron 7 of 11)	106591	NM_004361	1005	Hs.541003	NM_004361	ENSG00000081138	CDH7	CDH7L1	cadherin 7	protein-coding
18.3333-13	chr6	150503135	150503610	+	0.0666667	NA	Intergenic	Intergenic	-96513	NM_001329804	57480	Hs.189781	NM_001029884	ENSG00000120278	PLEKHG1	ARHGEF41	pleckstrin homology and RhoGEF domain containing G1	protein-coding
18.8333-7	chr18	1368605	1369029	+	0.0666667	NA	Intergenic	LTR33A|LTR|ERVL	-9188	NR_023925	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA
21.6667-2	chr12	8534237	8534769	+	0.0666667	NA	3' UTR (NM_014358, exon 6 of 6)	3' UTR (NM_014358, exon 6 of 6)	6402	NM_014358	26253	Hs.236516	NM_014358	ENSG00000166523	CLEC4E	CLECSF9|MINCLE	C-type lectin domain family 4 member E	protein-coding
16.8333-13	chr5	180520951	180521331	+	0.0666667	NA	intron (NR_163437, intron 2 of 12)	LTR24C|LTR|ERV1	-20513	NM_001370474	57472	Hs.608380	NM_015455	ENSG00000113300	CNOT6	CCR4|Ccr4a	CCR4-NOT transcription complex subunit 6	protein-coding
12.2-10	chr9	93816174	93816411	+	0.0666667	NA	Intergenic	Intergenic	-3065	NR_036254	100422927		NR_036254	ENSG00000265347	MIR4291	-	microRNA 4291	ncRNA
18.8333-8	chr2	223536114	223536546	+	0.0666667	NA	Intergenic	L2a|LINE|L2	66031	NM_003469	7857	Hs.516726	NM_003469	ENSG00000171951	SCG2	CHGC|EM66|SN|SgII	secretogranin II	protein-coding
24.9-5	chr17	58973069	58973640	+	0.0666667	NA	intron (NM_014906, intron 6 of 6)	AluSx3|SINE|Alu	133526	NM_001005207	4591	Hs.579079	NM_015294	ENSG00000108395	TRIM37	MUL|POB1|TEF3	tripartite motif containing 37	protein-coding
17.2-10	chr7	18342075	18342401	+	0.0666667	NA	intron (NM_001321896, intron 1 of 12)	L1MEc|LINE|L1	52146	NM_001321896	9734	Hs.196054	NM_014707	ENSG00000048052	HDAC9	HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR	histone deacetylase 9	protein-coding
18.2667-10	chr2	76965604	76966068	+	0.0666667	NA	intron (NR_146416, intron 1 of 1)	intron (NR_146416, intron 1 of 1)	-20129	NR_110284	101927907	Hs.382185	NR_110284	ENSG00000234653	LOC101927907	-	uncharacterized LOC101927907	ncRNA
16.0667-10	chr20	3487750	3488128	+	0.0666667	NA	intron (NM_001323332, intron 1 of 25)	L1ME3C|LINE|L1	16921	NM_139322	8455	Hs.276252	NM_012070	ENSG00000088812	ATRN	DPPT-L|MGCA	attractin	protein-coding
18.7333	chr1	29761560	29762102	+	0.0666667	NA	Intergenic	Intergenic	275781	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA
27.7333	chr11	130342446	130343245	+	0.0666667	NA	intron (NR_148980, intron 1 of 6)	intron (NR_148980, intron 1 of 6)	27852	NR_148980	646383	Hs.155288	NM_001039787	ENSG00000175773	ZBTB44-DT	-	ZBTB44 divergent transcript	ncRNA
26.7333-17	chr8	48668977	48669515	+	0.0666667	NA	intron (NR_105002, intron 2 of 3)	intron (NR_105002, intron 2 of 3)	48843	NR_105004	101929217	Hs.547790	NR_105004	ENSG00000253455	LOC101929217	-	uncharacterized LOC101929217	ncRNA
2.53333	chr8	49976338	49976397	+	0.0666667	NA	intron (NR_135798, intron 1 of 15)	intron (NR_135798, intron 1 of 15)	64960	NR_135794	54212	Hs.584914	NM_018967	ENSG00000147481	SNTG1	G1SYN|SYN4	syntrophin gamma 1	protein-coding
16.8333-7	chr20	34055403	34055767	+	0.0666667	NA	intron (NM_007367, intron 2 of 8)	L2c|LINE|L2	6466	NR_039911	100616434		NR_039911	ENSG00000264616	MIR4755	mir-4755	microRNA 4755	ncRNA
11.5-4	chr12	29683762	29684068	+	0.0666667	NA	intron (NM_001367875, intron 5 of 19)	AluSz|SINE|Alu	100027	NM_001193451	83857	Hs.401954	NM_031920	ENSG00000133687	TMTC1	ARG99|OLF|TMTC1A	transmembrane O-mannosyltransferase targeting cadherins 1	protein-coding
22.8333	chr1	67740144	67740724	+	0.0666667	NA	intron (NM_018841, intron 2 of 3)	MER58A|DNA|hAT-Charlie	55233	NM_001199741	1647	Hs.80409	NM_001924	ENSG00000116717	GADD45A	DDIT1|GADD45	growth arrest and DNA damage inducible alpha	protein-coding
23.0333-8	chr3	89232168	89232617	+	0.0666667	NA	intron (NM_182644, intron 3 of 6)	intron (NM_182644, intron 3 of 6)	124771	NM_182644	2042	Hs.123642	NM_005233	ENSG00000044524	EPHA3	EK4|ETK|ETK1|HEK|HEK4|TYRO4	EPH receptor A3	protein-coding
18.8-5	chr17	47081963	47082456	+	0.0666667	NA	Intergenic	AluSp|SINE|Alu	-102956	NM_203400	388394	Hs.367999	NM_203400	ENSG00000179673	RPRML	-	reprimo like	protein-coding
12.8667-6	chr4	99815214	99815521	+	0.0666667	NA	Intergenic	Intergenic	-1460	NM_001306151	27071	Hs.436271	NM_014395	ENSG00000070190	DAPP1	BAM32	dual adaptor of phosphotyrosine and 3-phosphoinositides 1	protein-coding
16.6667-9	chr3	113968814	113969289	+	0.0666667	NA	intron (NR_148531, intron 14 of 14)	MSTB1|LTR|ERVL-MaLR	21038	NM_173570	254887	Hs.21902	NM_173570	ENSG00000184307	ZDHHC23	DHHC-23|NIDD	zinc finger DHHC-type containing 23	protein-coding
18.8333-2	chr1	63608054	63608533	+	0.0666667	NA	intron (NM_001172819, intron 1 of 10)	intron (NM_001172819, intron 1 of 10)	14484	NM_001172819	5236	Hs.1869	NM_002633	ENSG00000079739	PGM1	CDG1T|GSD14	phosphoglucomutase 1	protein-coding
14.1333	chr11	77269284	77269612	+	0.0666667	NA	intron (NM_182833, intron 8 of 16)	intron (NM_182833, intron 8 of 16)	32218	NM_182833	220032	Hs.249795	NM_182833	ENSG00000178795	GDPD4	GDE6	glycerophosphodiester phosphodiesterase domain containing 4	protein-coding
27.6-4	chr17	28976064	28976762	+	0.0666667	NA	intron (NM_001290202, intron 3 of 16)	intron (NM_001290202, intron 3 of 16)	-24895	NM_001033561	57649	Hs.444173	NM_020889	ENSG00000109118	PHF12	PF1	PHD finger protein 12	protein-coding
14.0667-8	chr2	139592562	139592947	+	0.0666667	NA	Intergenic	Intergenic	695430	NR_033658	647012	Hs.639411	NR_033658		YY1P2	-	YY1 transcription factor pseudogene 2	pseudo
11.6667-11	chr8	104508877	104509218	+	0.0666667	NA	exon (NM_001135703, exon 2 of 6)	exon (NM_001135703, exon 2 of 6)	-24582	NR_030330	693127		NR_030330	ENSG00000208032	MIR548A3	MIRN548A3	microRNA 548a-3	ncRNA
25.7-10	chr4	55390465	55390991	+	0.0666667	NA	Intergenic	Intergenic	-5148	NR_037969	100506462	Hs.718667	NR_037969	ENSG00000249700	SRD5A3-AS1	-	SRD5A3 antisense RNA 1	ncRNA
7.4-5	chr6	68030276	68030466	+	0.0666667	NA	Intergenic	Intergenic	-24980	NR_125869	102723883	Hs.566528	NR_125869	ENSG00000223504	LOC102723883	-	uncharacterized LOC102723883	ncRNA
7.53334	chr19	12373261	12373376	+	0.0666667	NA	Intergenic	AluJb|SINE|Alu	-7635	NM_030824	79973	Hs.253193	NM_030824	ENSG00000198342	ZNF442	-	zinc finger protein 442	protein-coding
10.7333-9	chr9	82480320	82480600	+	0.0666667	NA	Intergenic	Intergenic	491688	NM_001001670	389763	Hs.209545	NM_001001670	ENSG00000214929	SPATA31D1	FAM75D1	SPATA31 subfamily D member 1	protein-coding
12.3333	chr10	21729028	21729313	+	0.0666667	NA	intron (NM_001195626, intron 16 of 22)	intron (NM_001195626, intron 16 of 22)	194998	NM_001195626	8028	Hs.30385	NM_004641	ENSG00000078403	MLLT10	AF10	MLLT10 histone lysine methyltransferase DOT1L cofactor	protein-coding
16.1-4	chr17	65043484	65043904	+	0.0666667	NA	intron (NM_006572, intron 2 of 3)	intron (NM_006572, intron 2 of 3)	12080	NM_001282425	10672	Hs.515018	NM_006572	ENSG00000120063	GNA13	G13	G protein subunit alpha 13	protein-coding
7.86667	chr21	35170583	35170715	+	0.0666667	NA	Intergenic	Intergenic	-121351	NM_001754	861	Hs.149261	NM_001754	ENSG00000159216	RUNX1	AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha	RUNX family transcription factor 1	protein-coding
18.5-3	chr12	111720745	111721291	+	0.0666667	NA	intron (NM_025247, intron 7 of 20)	AluSz6|SINE|Alu	34965	NM_025247	80724	Hs.331141	NM_025247	ENSG00000111271	ACAD10	-	acyl-CoA dehydrogenase family member 10	protein-coding
12.2667	chr12	74842235	74842486	+	0.0666667	NA	Intergenic	Intergenic	304525	NM_001136262	552889	Hs.744849	NM_001136262	ENSG00000253719	ATXN7L3B	lnc-SCA7	ataxin 7 like 3B	protein-coding
12.3333-5	chr12	93926427	93926627	+	0.0666667	NA	intron (NR_135017, intron 1 of 2)	L1MEh|LINE|L1	17079	NR_135017	105369911	Hs.577495	NR_135017	ENSG00000257283	LOC105369911	-	uncharacterized LOC105369911	ncRNA
16.6-15	chr8	29326052	29326420	+	0.0666667	NA	Intergenic	SATR1|Satellite|Satellite	22569	NM_057158	1846	Hs.417962	NM_001394	ENSG00000120875	DUSP4	HVH2|MKP-2|MKP2|TYP	dual specificity phosphatase 4	protein-coding
10.1-2	chr7	74255121	74255359	+	0.0666667	NA	promoter-TSS (NM_002914)	promoter-TSS (NM_002914)	-782	NM_001278791	5982	Hs.647062	NM_002914	ENSG00000049541	RFC2	RFC40	replication factor C subunit 2	protein-coding
20-10	chr6	84287901	84288348	+	0.0666667	NA	Intergenic	HAL1M8|LINE|L1	-60481	NM_001286206	22832	Hs.485865	NM_014895	ENSG00000135315	CEP162	C6orf84|KIAA1009|QN1	centrosomal protein 162	protein-coding
16.7667-9	chr6	37901897	37902291	+	0.0666667	NA	intron (NM_021943, intron 1 of 5)	intron (NM_021943, intron 1 of 5)	82367	NM_021943	60685	Hs.36959	NM_021943	ENSG00000156639	ZFAND3	TEX27	zinc finger AN1-type containing 3	protein-coding
11.3	chr1	179319378	179319618	+	0.0666667	NA	intron (NM_001252511, intron 2 of 14)	AluSx|SINE|Alu	25701	NR_045530	6646	Hs.445588	NM_003101	ENSG00000057252	SOAT1	ACACT|ACAT|ACAT-1|ACAT1|SOAT|STAT	sterol O-acyltransferase 1	protein-coding
29.1333-10	chr9	102291509	102292124	+	0.0666667	NA	Intergenic	Intergenic	-227821	NR_103830	414319	Hs.385790	NR_103830	ENSG00000204250	LINC00587	C9orf107|bA785H23.1	long intergenic non-protein coding RNA 587	ncRNA
15.2667-12	chr8	81189574	81189897	+	0.0666667	NA	Intergenic	Intergenic	-77667	NM_018440	55824	Hs.266175	NM_018440	ENSG00000076641	PAG1	CBP|PAG	phosphoprotein membrane anchor with glycosphingolipid microdomains 1	protein-coding
18.2667-14	chr4	125726797	125727143	+	0.0666667	NA	Intergenic	Tigger2|DNA|TcMar-Tigger	219711	NR_031746	100302267		NR_031746	ENSG00000283550	MIR2054	hsa-mir-2054	microRNA 2054	ncRNA
7.39999	chr1	222076685	222076900	+	0.0666667	NA	Intergenic	Intergenic	-98272	NR_149057	105372950	Hs.185118	NR_149057	ENSG00000238042	LINC02257	-	long intergenic non-protein coding RNA 2257	ncRNA
18.4333-8	chr21	25107073	25107587	+	0.0666667	NA	Intergenic	Intergenic	266780	NR_046198	339622	Hs.616316	NR_046198	ENSG00000226983	LINC01692	-	long intergenic non-protein coding RNA 1692	ncRNA
20.6333-16	chr9	70892966	70893463	+	0.0666667	NA	intron (NM_001366143, intron 1 of 25)	intron (NM_001366143, intron 1 of 25)	-24162	NM_024971	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding
17.3-3	chr14	66322582	66322923	+	0.0666667	NA	Intergenic	MLT1D|LTR|ERVL-MaLR	-163619	NR_024338	440184	Hs.412138	NM_001004331	ENSG00000196553	CCDC196	C14orf53|LINC00238|NCRNA00238	coiled-coil domain containing 196	protein-coding
15.5333-7	chr2	146523043	146523420	+	0.0666667	NA	Intergenic	Intergenic	-63826	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
13.2-14	chr8	131495022	131495346	+	0.0666667	NA	Intergenic	HAL1|LINE|L1	-408909	NR_136615	23167	Hs.204564	NM_015137	ENSG00000132294	EFR3A	-	EFR3 homolog A	protein-coding
16.5333-12	chr8	123567985	123568367	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-26970	NM_058229	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding
17.5333-10	chr20	62884613	62885113	+	0.0666667	NA	intron (NM_033081, intron 15 of 15)	intron (NM_033081, intron 15 of 15)	-1960	NR_145839	109623463		NR_145839		SNORA117	-	small nucleolar RNA, H/ACA box 117	snoRNA
7.76667	chr17	43694006	43694122	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-32142	NM_004527	4222	Hs.438	NM_004527	ENSG00000005102	MEOX1	KFS2|MOX1	mesenchyme homeobox 1	protein-coding
20.8333-5	chr12	46097922	46098246	+	0.0666667	NA	Intergenic	L1PB1|LINE|L1	-107510	NM_004719	9169	Hs.210367	NM_004719	ENSG00000139218	SCAF11	CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP	SR-related CTD associated factor 11	protein-coding
19.2333-7	chr18	68881478	68881929	+	0.0666667	NA	intron (NM_001093729, intron 7 of 9)	MLT2B4|LTR|ERVL	83623	NM_024781	79839	Hs.280781	NM_024781	ENSG00000150636	CCDC102B	ACY1L|AN|C18orf14|HsT1731	coiled-coil domain containing 102B	protein-coding
14.4-4	chr1	247735619	247736009	+	0.0666667	NA	intron (NM_001355292, intron 1 of 4)	intron (NM_001355292, intron 1 of 4)	-2801	NM_001004732	343170		NM_001004732	ENSG00000153230	OR14K1	OR1-39|OR1.5.9|OR5AY1	olfactory receptor family 14 subfamily K member 1	protein-coding
16.7-12	chr2	236597409	236597807	+	0.0666667	NA	Intergenic	Intergenic	27783	NM_020311	57007	Hs.471751	NM_020311	ENSG00000144476	ACKR3	CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1	atypical chemokine receptor 3	protein-coding
16.7333-10	chr5	17233424	17233719	+	0.0666667	NA	intron (NM_006317, intron 1 of 1)	intron (NM_006317, intron 1 of 1)	15940	NM_006317	10409	Hs.201641	NM_006317	ENSG00000176788	BASP1	CAP-23|CAP23|NAP-22|NAP22	brain abundant membrane attached signal protein 1	protein-coding
14.7-4	chr11	94528044	94528374	+	0.0666667	NA	exon (NM_001190462, exon 3 of 4)	exon (NM_001190462, exon 3 of 4)	-15642	NM_002033	2526	Hs.390420	NM_002033	ENSG00000196371	FUT4	CD15|ELFT|FCT3A|FUC-TIV|FUTIV|LeX|SSEA-1	fucosyltransferase 4	protein-coding
17.3667-13	chr7	100675620	100675926	+	0.0666667	NA	intron (NM_005273, intron 1 of 9)	CpG	2033	NM_005273	2783	Hs.185172	NM_005273	ENSG00000172354	GNB2	-	G protein subunit beta 2	protein-coding
15.6333-14	chr6	35421882	35422164	+	0.0666667	NA	intron (NM_177435, intron 5 of 6)	intron (NM_177435, intron 5 of 6)	-30338	NM_021922	2178	Hs.302003	NM_021922	ENSG00000112039	FANCE	FACE|FAE	FA complementation group E	protein-coding
27.0333-5	chr16	50539837	50540448	+	0.0666667	NA	Intergenic	Intergenic	-8254	NM_033119	85407	Hs.187578	NM_033119	ENSG00000140807	NKD1	Naked1	NKD inhibitor of WNT signaling pathway 1	protein-coding
22.3667-8	chrX	108700864	108701393	+	0.0666667	NA	Intergenic	LTR33|LTR|ERVL	35249	NM_003604	8471	Hs.407141	NM_003604	ENSG00000133124	IRS4	IRS-4|PY160	insulin receptor substrate 4	protein-coding
20.5667-7	chr2	77442208	77442756	+	0.0666667	NA	intron (NR_146416, intron 1 of 1)	intron (NR_146416, intron 1 of 1)	79894	NM_024993	80059	Hs.285782	NM_024993	ENSG00000176204	LRRTM4	-	leucine rich repeat transmembrane neuronal 4	protein-coding
26.5667-7	chr2	236616658	236617284	+	0.0666667	NA	Intergenic	L1ME3G|LINE|L1	47146	NM_020311	57007	Hs.471751	NM_020311	ENSG00000144476	ACKR3	CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1	atypical chemokine receptor 3	protein-coding
27.6667-12	chr5	102400890	102401349	+	0.0666667	NA	intron (NM_173488, intron 9 of 13)	L2a|LINE|L2	97882	NM_001289004	133482	Hs.388874	NM_173488	ENSG00000205359	SLCO6A1	CT48|GST|OATP-I|OATP6A1|OATPY	solute carrier organic anion transporter family member 6A1	protein-coding
10.8667	chr11	110807219	110807416	+	0.0666667	NA	Intergenic	Intergenic	-94128	NM_001258418	57569	Hs.6136	NM_020809	ENSG00000137727	ARHGAP20	RARHOGAP	Rho GTPase activating protein 20	protein-coding
14.7667-2	chr3	154714585	154714903	+	0.0666667	NA	Intergenic	LTR89|LTR|ERVL?	-284554	NM_001038705	344758	Hs.376338	NM_001038705	ENSG00000174948	GPR149	IEDA|PGR10|R35	G protein-coupled receptor 149	protein-coding
12.2667-5	chr8	58609017	58609213	+	0.0666667	NA	intron (NM_001144772, intron 10 of 30)	intron (NM_001144772, intron 10 of 30)	50292	NM_001144772	8439	Hs.372000	NM_003580	ENSG00000035681	NSMAF	FAN|GRAMD5	neutral sphingomyelinase activation associated factor	protein-coding
17.2667-12	chr2	58876485	58876910	+	0.0666667	NA	intron (NR_033873, intron 3 of 13)	intron (NR_033873, intron 3 of 13)	-341011	NR_110219	101927285	Hs.570209	NR_110219	ENSG00000222030	LINC01793	-	long intergenic non-protein coding RNA 1793	ncRNA
10.5667-6	chrY	11294906	11295133	+	0.0666667	NA	Intergenic	AluYg6|SINE|Alu	1126571	NR_033667	352887	Hs.546221	NR_033667	ENSG00000206159	GYG2P1	GYG2P	glycogenin 2 pseudogene 1	pseudo
15.5333-6	chr2	122343972	122344231	+	0.0666667	NA	Intergenic	Intergenic	588450	NM_004622	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding
18.8667	chr10	57228929	57229328	+	0.0666667	NA	Intergenic	L1MA4|LINE|L1	75431	NR_037490	100500834		NR_037490	ENSG00000264747	MIR3924	-	microRNA 3924	ncRNA
30.5333	chr1	41573525	41574414	+	0.0666667	NA	intron (NM_024503, intron 5 of 8)	intron (NM_024503, intron 5 of 8)	-89286	NM_001302269	1907	Hs.1407	NM_001956	ENSG00000127129	EDN2	ET-2|ET2|PPET2	endothelin 2	protein-coding
16.8667-14	chr8	142680384	142680803	+	0.0666667	NA	promoter-TSS (NM_005672)	promoter-TSS (NM_005672)	98	NM_005672	8000	Hs.652235	NM_005672	ENSG00000167653	PSCA	PRO232	prostate stem cell antigen	protein-coding
16.9-3	chr14	83575105	83575534	+	0.0666667	NA	Intergenic	L2c|LINE|L2	932687	NR_146650	101928599		NR_146650	ENSG00000258743	LINC02301	-	long intergenic non-protein coding RNA 2301	ncRNA
11.3333	chr1	4217322	4217606	+	0.0666667	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-194587	NR_027088	284661	Hs.278112	NR_027088	ENSG00000235054	LINC01777	-	long intergenic non-protein coding RNA 1777	ncRNA
14.6333-2	chr1	235286305	235286627	+	0.0666667	NA	intron (NR_135074, intron 2 of 24)	L2c|LINE|L2	41021	NM_001206794	51742	Hs.575782	NM_016374	ENSG00000054267	ARID4B	BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180	AT-rich interaction domain 4B	protein-coding
27.8-2	chr1	185627322	185627850	+	0.0666667	NA	intron (NR_110793, intron 1 of 3)	L1ME5|LINE|L1	902	NR_110793	101929093	Hs.535227	NR_110793	ENSG00000228309	LINC01350	GS1-204I12.1	long intergenic non-protein coding RNA 1350	ncRNA
13.3333-11	chr2	55247504	55247834	+	0.0666667	NA	intron (NM_001005369, intron 10 of 16)	intron (NM_001005369, intron 10 of 16)	13505	NR_039624	100616345		NR_039624	ENSG00000283795	MIR4426	-	microRNA 4426	ncRNA
15.3667-6	chr13	62096430	62096848	+	0.0666667	NA	Intergenic	L1ME3D|LINE|L1	-67091	NR_046995	100874143	Hs.552684	NR_046995	ENSG00000229578	LINC00358	-	long intergenic non-protein coding RNA 358	ncRNA
30.1333-2	chr17	80317463	80317964	+	0.0666667	NA	intron (NM_020954, intron 16 of 16)	LTR28B|LTR|ERV1	56861	NM_020954	57674	Hs.195642	NM_020914	ENSG00000173821	RNF213	ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57	ring finger protein 213	protein-coding
14.8333-8	chr19	37640620	37641046	+	0.0666667	NA	intron (NM_001320666, intron 5 of 5)	intron (NM_001320666, intron 5 of 5)	14632	NM_001320666	22835	Hs.668737	NM_014898	ENSG00000120784	ZFP30	ZNF745	ZFP30 zinc finger protein	protein-coding
17.8-16	chr4	121370956	121371457	+	0.0666667	NA	intron (NM_198179, intron 1 of 5)	intron (NM_198179, intron 1 of 5)	9812	NM_198179	84109	Hs.368977	NM_198179	ENSG00000186867	QRFPR	AQ27|GPR103|SP9155	pyroglutamylated RFamide peptide receptor	protein-coding
14.6-6	chr17	73076656	73077081	+	0.0666667	NA	intron (NM_001352692, intron 3 of 9)	intron (NM_001352692, intron 3 of 9)	15820	NM_001159770	201266	Hs.221127	NM_139177	ENSG00000133195	SLC39A11	C17orf26|ZIP-11|ZIP11	solute carrier family 39 member 11	protein-coding
15.1333-13	chr8	129461440	129461813	+	0.0666667	NA	intron (NR_130920, intron 1 of 3)	Tigger2|DNA|TcMar-Tigger	22516	NR_037457	100500839		NR_037457	ENSG00000263763	MIR3686	-	microRNA 3686	ncRNA
17.1333-15	chr3	45823431	45823862	+	0.0666667	NA	non-coding (NR_075080, exon 9 of 9)	non-coding (NR_075080, exon 9 of 9)	18473	NM_020347	54585	Hs.30824	NM_020347	ENSG00000163818	LZTFL1	BBS17	leucine zipper transcription factor like 1	protein-coding
18.4333-5	chr18	60178381	60178900	+	0.0666667	NA	Intergenic	LTR12|LTR|ERV1	194135	NM_005912	4160	Hs.532833	NM_005912	ENSG00000166603	MC4R	BMIQ20	melanocortin 4 receptor	protein-coding
8.83334	chr2	231167302	231167456	+	0.0666667	NA	intron (NM_001191037, intron 22 of 23)	intron (NM_001191037, intron 22 of 23)	-31252	NM_001352755	80210	Hs.162411	NM_025139	ENSG00000135931	ARMC9	ARM|JBTS30|KU-MEL-1|NS21	armadillo repeat containing 9	protein-coding
31-7	chr21	17913133	17913678	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-3935	NM_001204176	140578	Hs.283725	NM_024944	ENSG00000154645	CHODL	C21orf68|MT75|PRED12	chondrolectin	protein-coding
38.0667	chr1	197732749	197733630	+	0.0666667	NA	TTS (NM_001195216)	TTS (NM_001195216)	42291	NM_001195216	163486	Hs.125056	NM_019049	ENSG00000213047	DENND1B	C1ORF18|C1orf218|FAM31B	DENN domain containing 1B	protein-coding
19.5667-3	chr10	106735683	106736064	+	0.0666667	NA	intron (NM_001206569, intron 5 of 25)	intron (NM_001206569, intron 5 of 25)	428833	NM_001206571	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
25.8-9	chr15	85473706	85474477	+	0.0666667	NA	intron (NM_007200, intron 1 of 36)	intron (NM_007200, intron 1 of 36)	93488	NM_006738	11214	Hs.459211	NM_006738	ENSG00000170776	AKAP13	AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47	A-kinase anchoring protein 13	protein-coding
9.96667-2	chr2	207722624	207722794	+	0.0666667	NA	intron (NM_001330218, intron 1 of 9)	AluSg|SINE|Alu	11169	NM_152523	151195	Hs.471234	NM_152523	ENSG00000163249	CCNYL1	-	cyclin Y like 1	protein-coding
17.9333-3	chr13	88052456	88052917	+	0.0666667	NA	Intergenic	LTR28C|LTR|ERV1	-90181	NR_131919	105370306	Hs.560133	NR_131919	ENSG00000231019	LINC00373	-	long intergenic non-protein coding RNA 373	ncRNA
10.3-6	chr17	76262870	76263093	+	0.0666667	NA	Intergenic	Intergenic	-2367	NM_182565	283991	Hs.744981	NM_182565	ENSG00000185262	UBALD2	FAM100B	UBA like domain containing 2	protein-coding
8.53333-4	chr5	15637028	15637237	+	0.0666667	NA	intron (NM_001278317, intron 2 of 3)	L3|LINE|CR1	-22130	NR_109945	101929472	Hs.662664	NR_109945		CTD-2350J17.1	-	uncharacterized LOC101929472	ncRNA
27.8-8	chr2	146903247	146903752	+	0.0666667	NA	Intergenic	Intergenic	316442	NR_026904	728773	Hs.334462	NR_026904		PABPC1P2	PABP2|PABP4|PABPCP2|PABPCP4	poly(A) binding protein cytoplasmic 1 pseudogene 2	pseudo
13.5333-20	chr9	38219938	38220335	+	0.0666667	NA	Intergenic	L1MA3|LINE|L1	-150909	NM_003028	6461	Hs.521482	NM_003028	ENSG00000107338	SHB	bA3J10.2	SH2 domain containing adaptor protein B	protein-coding
21.7-4	chr17	62752911	62753485	+	0.0666667	NA	intron (NM_001288779, intron 4 of 11)	AluSz|SINE|Alu	46992	NR_147886	105371855	Hs.446268	NR_147886	ENSG00000265702	LOC105371855	-	uncharacterized LOC105371855	ncRNA
36.1667-7	chr4	108424124	108424740	+	0.0666667	NA	Intergenic	L1MC3|LINE|L1	-132801	NR_134679	101929621	Hs.679455	NR_134679		LOC101929621	-	uncharacterized LOC101929621	ncRNA
16.0667-13	chr8	10706701	10707062	+	0.0666667	NA	Intergenic	LTR16E2|LTR|ERVL	-22410	NR_146188	102723313	Hs.583894	NR_146188		LOC102723313	-	uncharacterized LOC102723313	ncRNA
23.1	chr10	11429498	11430032	+	0.0666667	NA	Intergenic	Intergenic	-85091	NR_126062	414196	Hs.729598	NM_001012713		CELF2-AS1	C10orf31	CELF2 antisense RNA 1	ncRNA
22.6333-17	chr9	96145784	96146339	+	0.0666667	NA	Intergenic	Intergenic	-29650	NR_132344	158434	Hs.381771	NM_001256408	ENSG00000275465	LOC158434	-	uncharacterized LOC158434	ncRNA
16.3333-13	chr9	98720210	98720651	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-11495	NM_005458	9568	Hs.198612	NM_005458	ENSG00000136928	GABBR2	EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS	gamma-aminobutyric acid type B receptor subunit 2	protein-coding
4.9-2	chrX	91454038	91454142	+	0.0666667	NA	Intergenic	MER57A-int|LTR|ERV1	-19091	NR_110659	102724167	Hs.571694	NR_110659	ENSG00000234161	PABPC5-AS1	CXorf46	PABPC5 antisense RNA 1	ncRNA
20.4333-10	chr7	82462086	82462636	+	0.0666667	NA	Intergenic	AluY|SINE|Alu	-18405	NM_001366867	781	Hs.282151	NM_000722	ENSG00000153956	CACNA2D1	CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3	calcium voltage-gated channel auxiliary subunit alpha2delta 1	protein-coding
19.7667-11	chr6	105544088	105544532	+	0.0666667	NA	Intergenic	Intergenic	-141228	NM_002726	5550	Hs.436564	NM_002726	ENSG00000085377	PREP	PE|PEP	prolyl endopeptidase	protein-coding
9.86667-2	chr4	98964567	98964762	+	0.0666667	NA	Intergenic	MSTB1|LTR|ERVL-MaLR	-31057	NM_015143	23173	Hs.480364	NM_015143	ENSG00000164024	METAP1	MAP1A|MetAP1A	methionyl aminopeptidase 1	protein-coding
21.3	chr1	78340581	78341074	+	0.0666667	NA	intron (NR_027310, intron 3 of 5)	AluSx3|SINE|Alu	111228	NR_027310	149047	Hs.352665	NM_144700	ENSG00000237413	MGC27382	-	uncharacterized MGC27382	ncRNA
23.7333-7	chr6	119803409	119803989	+	0.0666667	NA	intron (NR_134600, intron 2 of 3)	intron (NR_134600, intron 2 of 3)	-211480	NR_036098	100422951		NR_036098	ENSG00000265725	MIR3144	mir-3144	microRNA 3144	ncRNA
28.6333-7	chr2	192282149	192282937	+	0.0666667	NA	Intergenic	L1PB4|LINE|L1	-87610	NM_001305134	23671	Hs.144513	NM_016192	ENSG00000144339	TMEFF2	CT120.2|HPP1|TENB2|TPEF|TR|TR-2	transmembrane protein with EGF like and two follistatin like domains 2	protein-coding
18.7667-6	chr14	61756425	61756795	+	0.0666667	NA	Intergenic	L1ME3F|LINE|L1	-5513	NR_144368	105370526	Hs.661638	NR_144368	ENSG00000258667	HIF1A-AS3	-	HIF1A antisense RNA 3	ncRNA
21.8667-9	chr9	116837392	116837898	+	0.0666667	NA	intron (NM_014010, intron 10 of 21)	intron (NM_014010, intron 10 of 21)	150340	NM_001099679	22954	Hs.591910	NM_012210	ENSG00000119401	TRIM32	BBS11|HT2A|LGMD2H|LGMDR8|TATIP	tripartite motif containing 32	protein-coding
10.5667	chr10	127716587	127716834	+	0.0666667	NA	Intergenic	Intergenic	-20475	NM_207426	399823	Hs.449674	NM_207426	ENSG00000186766	FOXI2	-	forkhead box I2	protein-coding
5.26667	chr10	39063527	39063645	+	0.0666667	NA	Intergenic	ALR/Alpha|Satellite|centr	366990	NR_045000	399746	Hs.742607	NR_045000		ACTR3BP5	FKSG74	ACTR3B pseudogene 5	pseudo
13.0667-2	chr10	116550385	116550661	+	0.0666667	NA	intron (NM_000936, intron 4 of 12)	intron (NM_000936, intron 4 of 12)	4592	NM_000936	5406	Hs.501135	NM_000936	ENSG00000175535	PNLIP	PL|PNLIPD|PTL	pancreatic lipase	protein-coding
18.9667-2	chr12	121449551	121449876	+	0.0666667	NA	intron (NM_001005366, intron 13 of 22)	intron (NM_001005366, intron 13 of 22)	-5361	NR_106957	102465665		NR_106957	ENSG00000284402	MIR7107	hsa-mir-7107	microRNA 7107	ncRNA
26.1-12	chr4	123743462	123744026	+	0.0666667	NA	intron (NR_027105, intron 3 of 5)	intron (NR_027105, intron 3 of 5)	-30520	NR_027106	285419	Hs.535763	NR_027105	ENSG00000249464	LINC01091	-	long intergenic non-protein coding RNA 1091	ncRNA
23.9333-12	chr4	179859773	179860246	+	0.0666667	NA	Intergenic	L1MDa|LINE|L1	1299140	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
20.6667-4	chr11	106077384	106077846	+	0.0666667	NA	promoter-TSS (NM_015423)	promoter-TSS (NM_015423)	-47	NM_015423	60496	Hs.524009	NM_015423	ENSG00000149313	AASDHPPT	AASD-PPT|ACPS|CGI-80|LYS2|LYS5	aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	protein-coding
13.4667-8	chr6	62307547	62307901	+	0.0666667	NA	Intergenic	L1MEc|LINE|L1	-21497	NR_146870	202559	Hs.519794	NM_152688	ENSG00000112232	KHDRBS2	SLM-1|SLM1	KH RNA binding domain containing, signal transduction associated 2	protein-coding
21.6667-4	chr19	56267396	56267850	+	0.0666667	NA	intron (NM_001322061, intron 2 of 6)	MER3|DNA|hAT-Charlie	-5125	NM_001354658	100506374	Hs.631532	NM_001354658	ENSG00000267710	EDDM13	-	epididymal protein 13	protein-coding
13.4667-11	chr8	126125335	126125718	+	0.0666667	NA	Intergenic	L1MA9|LINE|L1	-174329	NR_038446	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA
15.9667-13	chr8	21479373	21479765	+	0.0666667	NA	Intergenic	Intergenic	181330	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA
24.5-11	chr4	179767050	179767555	+	0.0666667	NA	Intergenic	LTR41|LTR|ERVL	1391847	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA
20.4667-8	chr4	91285764	91286197	+	0.0666667	NA	intron (NM_001145065, intron 10 of 10)	intron (NM_001145065, intron 10 of 10)	991322	NR_125920	101929194	Hs.626389	NR_125920		LNCPRESS2	-	lncRNA p53 regulated and ESC associated 2	ncRNA
12.6333-7	chr4	33194570	33194870	+	0.0666667	NA	Intergenic	L2c|LINE|L2	843682	NR_134672	101927363	Hs.559406	NR_134672	ENSG00000251329	LINC02353	-	long intergenic non-protein coding RNA 2353	ncRNA
18.4-12	chr6	36098946	36099275	+	0.0666667	NA	intron (NM_139014, intron 9 of 10)	intron (NM_139014, intron 9 of 10)	-31403	NM_002754	5603	Hs.178695	NM_002754	ENSG00000156711	MAPK13	MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta	mitogen-activated protein kinase 13	protein-coding
20.0333-14	chr8	49631532	49632017	+	0.0666667	NA	Intergenic	Intergenic	-119594	NR_134294	100507464	Hs.245745	NR_134294	ENSG00000253380	LOC100507464	-	uncharacterized LOC100507464	ncRNA
15.8-12	chr4	83979402	83979642	+	0.0666667	NA	intron (NR_125909, intron 8 of 8)	AluSx|SINE|Alu	319647	NR_125909	101928978	Hs.647977	NR_125909	ENSG00000250546	LOC101928978	-	uncharacterized LOC101928978	ncRNA
19.9333-6	chr16	6322865	6323286	+	0.0666667	NA	intron (NM_018723, intron 2 of 15)	intron (NM_018723, intron 2 of 15)	303372	NM_001308117	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	RNA binding fox-1 homolog 1	protein-coding
30.7333-7	chr22	35647135	35647618	+	0.0666667	NA	Intergenic	MIRc|SINE|MIR	-1070	NM_030641	80830	Hs.257352	NM_030641	ENSG00000221963	APOL6	APOL-VI|APOLVI	apolipoprotein L6	protein-coding
12.7-7	chr6	50812360	50812674	+	0.0666667	NA	Intergenic	Intergenic	-6354	NM_003221	7021	Hs.33102	NM_003221	ENSG00000008196	TFAP2B	AP-2B|AP2-B|PDA2	transcription factor AP-2 beta	protein-coding
34.0333	chr1	113115718	113116361	+	0.0666667	NA	intron (NM_014813, intron 15 of 17)	intron (NM_014813, intron 15 of 17)	42841	NM_001312686	9860	Hs.448972	NM_014813	ENSG00000198799	LRIG2	LIG-2|LIG2|UFS2	leucine rich repeats and immunoglobulin like domains 2	protein-coding
17.9667-3	chr16	83122591	83123065	+	0.0666667	NA	intron (NM_001220489, intron 3 of 12)	L1PB4|LINE|L1	-132530	NR_110937	101928417	Hs.569538	NR_110937	ENSG00000260832	LOC101928417	-	uncharacterized LOC101928417	ncRNA
17.2333-3	chr15	93801388	93801852	+	0.0666667	NA	Intergenic	Intergenic	-54940	NR_120321	101927153	Hs.371900	NR_120321		LINC02207	-	long intergenic non-protein coding RNA 2207	ncRNA
13.5-10	chr5	63074738	63075036	+	0.0666667	NA	Intergenic	Intergenic	496068	NM_181506	100130733	Hs.721348	NM_181506	ENSG00000186105	LRRC70	SLRN	leucine rich repeat containing 70	protein-coding
20-5	chr2	40745103	40745403	+	0.0666667	NA	Intergenic	L1MEd|LINE|L1	-232818	NM_001112802	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding
18.8	chr1	72682299	72682730	+	0.0666667	NA	Intergenic	Intergenic	-399975	NM_173808	257194	Hs.146542	NM_173808	ENSG00000172260	NEGR1	DMML2433|IGLON4|KILON|Ntra	neuronal growth regulator 1	protein-coding
6.23333-3	chr6	51376068	51376223	+	0.0666667	NA	Intergenic	Intergenic	-245725	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA
25.2667-2	chr13	28047161	28047818	+	0.0666667	NA	intron (NM_004119, intron 9 of 23)	AluJb|SINE|Alu	53087	NR_130706	2322	Hs.507590	NM_004119	ENSG00000122025	FLT3	CD135|FLK-2|FLK2|STK1	fms related tyrosine kinase 3	protein-coding
20.4333-4	chr3	18090755	18091087	+	0.0666667	NA	intron (NR_161333, intron 4 of 4)	intron (NR_161333, intron 4 of 4)	128369	NR_161333	339862	Hs.652981	NR_046199		LOC339862	-	uncharacterized LOC339862	ncRNA
7.1-4	chr2	134398703	134398813	+	0.0666667	NA	intron (NM_001371457, intron 11 of 16)	L1MA4A|LINE|L1	144686	NM_002410	4249	Hs.4988	NM_002410	ENSG00000152127	MGAT5	GNT-V|GNT-VA|MGAT5A	alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase	protein-coding
20.7667-2	chr12	87643492	87643978	+	0.0666667	NA	Intergenic	Intergenic	-125077	NR_149056	110806294	Hs.615803	NR_149056		LINC02258	-	long intergenic non-protein coding RNA 2258	ncRNA
22.3	chr1	53475676	53476082	+	0.0666667	NA	Intergenic	Intergenic	16480	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding
16.9-6	chr5	21576857	21577161	+	0.0666667	NA	intron (NR_027026, intron 4 of 4)	AluSx|SINE|Alu	117529	NR_027026	728411	Hs.88181	NM_207331	ENSG00000183666	GUSBP1	-	GUSB pseudogene 1	pseudo
15.3333-2	chr13	56739058	56739450	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	-401664	NM_001130404	729233	Hs.723090	NM_001130404	ENSG00000204918	PRR20B	PRR20|PRR20A|PRR20C|PRR20D|PRR20E	proline rich 20B	protein-coding
16.0333-2	chr12	54007099	54007481	+	0.0666667	NA	Intergenic	Intergenic	-1695	NM_022658	3224	Hs.664500	NM_022658	ENSG00000037965	HOXC8	HOX3|HOX3A	homeobox C8	protein-coding
17.1-15	chr3	52020171	52020581	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-24481	NM_000992	6159	Hs.425125	NM_000992	ENSG00000162244	RPL29	HIP|HUMRPL29|L29|RPL29P10|RPL29_3_370	ribosomal protein L29	protein-coding
16.7667-4	chr22	27541926	27542257	+	0.0666667	NA	Intergenic	Intergenic	231440	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LINC02554	-	long intergenic non-protein coding RNA 2554	ncRNA
17.2-3	chr16	80025588	80025965	+	0.0666667	NA	Intergenic	Intergenic	230527	NR_104661	101928248	Hs.659802	NR_104660	ENSG00000260876	LINC01229	-	long intergenic non-protein coding RNA 1229	ncRNA
20.7-5	chr6	35935610	35936142	+	0.0666667	NA	Intergenic	AluSg|SINE|Alu	-14696	NR_034069	6732	Hs.443861	NM_003137	ENSG00000096063	SRPK1	SFRSK1	SRSF protein kinase 1	protein-coding
16.7333	chr10	67209933	67210271	+	0.0666667	NA	intron (NM_001127384, intron 6 of 17)	AluSc8|SINE|Alu	193308	NR_106973	102466814		NR_106973	ENSG00000276866	MIR7151	hsa-mir-7151	microRNA 7151	ncRNA
24.4-21	chr3	57205153	57205760	+	0.0666667	NA	Intergenic	L2a|LINE|L2	-5478	NM_003865	8820	Hs.171980	NM_003865	ENSG00000163666	HESX1	ANF|CPHD5|RPX	HESX homeobox 1	protein-coding
22	chr10	11614677	11615064	+	0.0666667	NA	Intergenic	Intergenic	-3081	NR_125732	9712	Hs.498661	NM_014688	ENSG00000148429	USP6NL	RNTRE|TRE2NL|USP6NL-IT1	USP6 N-terminal like	protein-coding
6.96667-2	chr2	203713220	203713372	+	0.0666667	NA	intron (NM_001243078, intron 1 of 2)	intron (NM_001243078, intron 1 of 2)	6657	NM_006139	940	Hs.443123	NM_006139	ENSG00000178562	CD28	Tp44	CD28 molecule	protein-coding
17.3667-6	chr3	97474305	97474679	+	0.0666667	NA	intron (NM_173655, intron 5 of 12)	MIR|SINE|MIR	34885	NM_001278300	285220	Hs.272208	NM_173655	ENSG00000080224	EPHA6	EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066	EPH receptor A6	protein-coding
20.0667-14	chr5	26284587	26285015	+	0.0666667	NA	Intergenic	THE1B-int|LTR|ERVL-MaLR	753785	NM_016279	1007	Hs.272212	NM_016279	ENSG00000113100	CDH9	-	cadherin 9	protein-coding
21.1333-9	chr17	57270662	57271092	+	0.0666667	NA	intron (NM_001322250, intron 5 of 13)	intron (NM_001322250, intron 5 of 13)	13858	NM_170721	124540	Hs.658922	NM_138962	ENSG00000153944	MSI2	MSI2H	musashi RNA binding protein 2	protein-coding
21.9-6	chr2	76175597	76176233	+	0.0666667	NA	Intergenic	L1MB7|LINE|L1	-465000	NM_001201335	6936	Hs.303808	NM_003203	ENSG00000005436	GCFC2	C2orf3|DNABF|GCF|TCF9	GC-rich sequence DNA-binding factor 2	protein-coding
14.3333-2	chr12	1852095	1852310	+	0.0666667	NA	intron (NM_172364, intron 23 of 37).2	L1MC5|LINE|L1	31637	NM_001039029	654429	Hs.585579	NM_001039029	ENSG00000166159	LRTM2	-	leucine rich repeats and transmembrane domains 2	protein-coding
18.3-4	chr20	42241004	42241487	+	0.0666667	NA	intron (NM_133170, intron 15 of 31)	intron (NM_133170, intron 15 of 31)	-444238	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA
16.7667-2	chr10	64746260	64746670	+	0.0666667	NA	Intergenic	LTR8B|LTR|ERV1	-79063	NR_001446	305	Hs.591361	NR_001446		ANXA2P3	ANX2L3|ANX2P3|LIP2|LPC2C	annexin A2 pseudogene 3	pseudo
18.5667-2	chr12	62150003	62150369	+	0.0666667	NA	intron (NM_178539, intron 1 of 4)	L2c|LINE|L2	42653	NM_178539	338811	Hs.269745	NM_178539	ENSG00000198673	TAFA2	FAM19A2|TAFA-2	TAFA chemokine like family member 2	protein-coding
18.0333-6	chr17	82094443	82094713	+	0.0666667	NA	intron (NM_004104, intron 3 of 42)	AluY|SINE|Alu	3658	NM_004104	2194	Hs.83190	NM_004104	ENSG00000169710	FASN	FAS|OA-519|SDR27X1	fatty acid synthase	protein-coding
8.83333-5	chr20	51884289	51884477	+	0.0666667	NA	Intergenic	Tigger17c|DNA|TcMar-Tigger	-21470	NR_110016	101927678	Hs.683840	NR_110016	ENSG00000227964	LINC01429	-	long intergenic non-protein coding RNA 1429	ncRNA
23.0333-16	chrX	148186408	148187082	+	0.0666667	NA	Intergenic	Intergenic	205408	NM_152578	158521	Hs.128580	NM_152578	ENSG00000176988	FMR1NB	CT37|NY-SAR-35|NYSAR35	FMR1 neighbor	protein-coding
6.5-2	chrX	100180030	100180127	+	0.0666667	NA	Intergenic	L1PB1|LINE|L1	230195	NM_020766	57526	Hs.4993	NM_020766	ENSG00000165194	PCDH19	EFMR|EIEE9	protocadherin 19	protein-coding
21.8333-7	chr3	39660374	39660834	+	0.0666667	NA	Intergenic	L1MB8|LINE|L1	-148310	NM_001284423	25924	Hs.594535	NM_015460	ENSG00000170011	MYRIP	SLAC2-C|SLAC2C	myosin VIIA and Rab interacting protein	protein-coding
5.5	chr20	54682574	54682656	+	0.0666667	NA	Intergenic	Intergenic	207022	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding
9.73334	chr1	177910450	177910616	+	0.0666667	NA	Intergenic	Intergenic	59389	NM_033127	89866	Hs.149540	NM_033127	ENSG00000120341	SEC16B	LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S	SEC16 homolog B, endoplasmic reticulum export factor	protein-coding
13.1-11	chr9	29908448	29908783	+	0.0666667	NA	Intergenic	Intergenic	499839	NR_046204	401497	Hs.680131	NR_046204		LINC01242	-	long intergenic non-protein coding RNA 1242	ncRNA
4.86667	chr2	129346843	129346946	+	0.0666667	NA	Intergenic	L1MB7|LINE|L1	-73003	NR_122040	151121	Hs.531687	NM_001033657	ENSG00000204460	LINC01854	-	long intergenic non-protein coding RNA 1854	ncRNA
13.9667-5	chr3	108628012	108628337	+	0.0666667	NA	intron (NM_014648, intron 7 of 32)	AluSc5|SINE|Alu	38452	NM_014648	9666	Hs.409210	NM_014648	ENSG00000198919	DZIP3	PPP1R66|UURF2|hRUL138	DAZ interacting zinc finger protein 3	protein-coding
21.9667-8	chr5	10607004	10607449	+	0.0666667	NA	intron (NM_001164440, intron 1 of 3)	MLT1I|LTR|ERVL-MaLR	43156	NM_001164440	651746	Hs.26039	NM_001164440	ENSG00000164236	ANKRD33B	-	ankyrin repeat domain 33B	protein-coding
18.2667-11	chr2	158554523	158554997	+	0.0666667	NA	intron (NM_001005476, intron 2 of 20)	L2|LINE|L2	97808	NM_001304970	8502	Hs.407580	NM_003628	ENSG00000144283	PKP4	p0071	plakophilin 4	protein-coding
19.5667-6	chr17	57463783	57464333	+	0.0666667	NA	intron (NM_001322250, intron 6 of 13)	intron (NM_001322250, intron 6 of 13)	59539	NR_110808	101927557	Hs.639984	NR_110808	ENSG00000266100	LOC101927557	-	uncharacterized LOC101927557	ncRNA
21.5-8	chr5	127014494	127014951	+	0.0666667	NA	intron (NM_178450, intron 1 of 4)	L1MA5A|LINE|L1	15836	NM_178450	115123	Hs.132441	NM_178450	ENSG00000173926	MARCH3	MARCH-III|RNF173	membrane associated ring-CH-type finger 3	protein-coding
9.03333-4	chr2	8919764	8920022	+	0.0666667	NA	intron (NR_135605, intron 1 of 11)	AluJr4|SINE|Alu	-82280	NM_001348736	57498	Hs.9873	NM_020738	ENSG00000134313	KIDINS220	ARMS|SINO	kinase D interacting substrate 220	protein-coding
17.5667-6	chr19	49910647	49911062	+	0.0666667	NA	intron (NM_001193357, intron 1 of 1)	intron (NM_001193357, intron 1 of 1)	-13967	NM_152899	259307	Hs.574492	NM_152899	ENSG00000104951	IL4I1	FIG1|LAAO|LAO	interleukin 4 induced 1	protein-coding
28.3667	chr17	72980949	72981520	+	0.0666667	NA	intron (NM_001352692, intron 4 of 9)	MER33|DNA|hAT-Charlie	111454	NM_001159770	201266	Hs.221127	NM_139177	ENSG00000133195	SLC39A11	C17orf26|ZIP-11|ZIP11	solute carrier family 39 member 11	protein-coding
21.6333-6	chr2	45006738	45007348	+	0.0666667	NA	intron (NM_016932, intron 1 of 1)	intron (NM_016932, intron 1 of 1)	2409	NM_016932	10736	Hs.101937	NM_016932	ENSG00000170577	SIX2	-	SIX homeobox 2	protein-coding
7.83333	chr11	64479938	64480126	+	0.0666667	NA	Intergenic	L1ME1|LINE|L1	30975	NR_073177	100996455	Hs.634142	NR_073177	ENSG00000181908	LINC02724	-	long intergenic non-protein coding RNA 2724	ncRNA
19.3667-5	chr19	57934996	57935286	+	0.0666667	NA	intron (NM_001317028, intron 1 of 6)	CpG-15284	261	NM_001317027	147686	Hs.660728	NM_133460	ENSG00000196724	ZNF418	-	zinc finger protein 418	protein-coding
16.3333-4	chr14	38804741	38805104	+	0.0666667	NA	intron (NR_039982, intron 4 of 4)	L1MA5|LINE|L1	-77674	NR_135256	105370457	Hs.128254	NR_135256		LOC105370457	-	uncharacterized LOC105370457	ncRNA
29.6667-5	chr2	166520244	166520782	+	0.0666667	NA	Intergenic	AluSx|SINE|Alu	-33542	NR_045628	6332	Hs.596087	NM_002976	ENSG00000136546	SCN7A	NaG|Nav2.1|Nav2.2|SCN6A	sodium voltage-gated channel alpha subunit 7	protein-coding
18.6-11	chr17	14045241	14045703	+	0.0666667	NA	intron (NR_049718, intron 1 of 2)	MER94|DNA|hAT-Blackjack	20974	NR_003261	94158	Hs.633073	NR_003261		CDRT15P1	CDRT15P	CMT1A duplicated region transcript 15 pseudogene 1	pseudo
21.1667-8	chr22	20057269	20057704	+	0.0666667	NA	intron (NM_001283215, intron 6 of 6)	intron (NM_001283215, intron 6 of 6)	-22746	NM_001190326	54487	Hs.643452	NM_022720	ENSG00000128191	DGCR8	C22orf12|DGCRK6|Gy1|pasha	DGCR8 microprocessor complex subunit	protein-coding
22.6667-6	chr5	120502414	120502964	+	0.0666667	NA	intron (NM_016644, intron 2 of 2)	MIR3|SINE|MIR	-28775	NM_001308088	51334	Hs.157461	NM_016644	ENSG00000184838	PRR16	DSC54|LARGEN	proline rich 16	protein-coding
25.8333-11	chr7	56540237	56540681	+	0.0666667	NA	Intergenic	Intergenic	-2329	NR_108099	101928401	Hs.385614	NR_108099	ENSG00000233288	LOC101928401	-	uncharacterized LOC101928401	ncRNA
19.3667-3	chr15	101301807	101302263	+	0.0666667	NA	Intergenic	Intergenic	-6787	NR_135507	6627	Hs.528763	NM_003090	ENSG00000131876	SNRPA1	Lea1|U2A'	small nuclear ribonucleoprotein polypeptide A'	protein-coding
28.2-15	chr7	79291208	79291714	+	0.0666667	NA	intron (NM_001301128, intron 1 of 20)	L1MB8|LINE|L1	-161496	NR_038345	100505881	Hs.31474	NR_038343	ENSG00000234456	MAGI2-AS3	-	MAGI2 antisense RNA 3	ncRNA
16.7667-3	chr17	65438852	65439274	+	0.0666667	NA	Intergenic	Intergenic	-18478	NR_131984	105827617		NR_131984	ENSG00000263520	LINC02563	CRAT40	long intergenic non-protein coding RNA 2563	ncRNA
11.8-8	chr8	128121140	128121425	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	-28834	NR_031613	100302281		NR_031613	ENSG00000221261	MIR1208	MIRN1208|hsa-mir-1208	microRNA 1208	ncRNA
25.3666	chr1	112560428	112561183	+	0.0666667	NA	intron (NM_017744, intron 11 of 14)	AluSq2|SINE|Alu	51840	NM_024494	7482	Hs.258575	NM_004185	ENSG00000134245	WNT2B	WNT13	Wnt family member 2B	protein-coding
20.5667-5	chr12	119385575	119386071	+	0.0666667	NA	intron (NM_178499, intron 1 of 13)	LTR33|LTR|ERVL	51094	NM_178499	160777	Hs.98188	NM_178499	ENSG00000183273	CCDC60	-	coiled-coil domain containing 60	protein-coding
24.5666-2	chr12	12707082	12707754	+	0.0666667	NA	Intergenic	L2a|LINE|L2	-9852	NM_004064	1027	Hs.238990	NM_004064	ENSG00000111276	CDKN1B	CDKN4|KIP1|MEN1B|MEN4|P27KIP1	cyclin dependent kinase inhibitor 1B	protein-coding
16.7-10	chr2	66458954	66459362	+	0.0666667	NA	intron (NM_002398, intron 6 of 12)	L2c|LINE|L2	-18828	NR_046625	100873998	Hs.734698	NR_046625	ENSG00000230749	MEIS1-AS2	MEIS1-AS1	MEIS1 antisense RNA 2	ncRNA
16.8667-6	chr2	26830321	26830729	+	0.0666667	NA	Intergenic	AluSx1|SINE|Alu	-17607	NM_020134	56896	Hs.299315	NM_020134	ENSG00000157851	DPYSL5	CRAM|CRMP-5|CRMP5|Ulip6	dihydropyrimidinase like 5	protein-coding
20.6667-5	chr12	62033697	62034245	+	0.0666667	NA	intron (NM_178539, intron 1 of 4)	MADE2|DNA|TcMar-Mariner	158868	NM_178539	338811	Hs.269745	NM_178539	ENSG00000198673	TAFA2	FAM19A2|TAFA-2	TAFA chemokine like family member 2	protein-coding
21.9667-6	chr20	1429348	1429943	+	0.0666667	NA	Intergenic	Intergenic	-36473	NR_037661	100528031	Hs.471933	NR_037661		FKBP1A-SDCBP2	-	FKBP1A-SDCBP2 readthrough (NMD candidate)	ncRNA
4.06667	chr13	109663567	109663657	+	0.0666667	NA	Intergenic	Intergenic	-64662	NR_103846	101409253	Hs.578072	NR_103846	ENSG00000234854	LINC00676	-	long intergenic non-protein coding RNA 676	ncRNA
28.5-13	chrX	56099167	56099799	+	0.0666667	NA	intron (NM_001324104, intron 2 of 6)	Tigger1|DNA|TcMar-Tigger	-132873	NM_007250	11279	Hs.646614	NM_007250	ENSG00000102349	KLF8	BKLF3|ZNF741	Kruppel like factor 8	protein-coding
21.7333	chr1	70639633	70640183	+	0.0666667	NA	Intergenic	Intergenic	-66545	NR_125938	101927244	Hs.568660	NR_125938	ENSG00000229051	LINC01788	-	long intergenic non-protein coding RNA 1788	ncRNA
11.4-5	chr2	123525864	123526147	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-452524	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
18.5333-2	chr1	211558507	211559046	+	0.0666667	NA	Intergenic	AluSz6|SINE|Alu	20385	NM_021194	7779	Hs.519469	NM_021194	ENSG00000170385	SLC30A1	ZNT1|ZRC1	solute carrier family 30 member 1	protein-coding
12.5667-4	chr17	4667154	4667516	+	0.0666667	NA	Intergenic	L1MC4a|LINE|L1	-25657	NM_001140	246	Hs.73809	NM_001140	ENSG00000161905	ALOX15	12-LOX|15-LOX|15-LOX-1|LOG15	arachidonate 15-lipoxygenase	protein-coding
22.2-5	chr14	64450049	64450623	+	0.0666667	NA	intron (NM_001304508, intron 2 of 2)	intron (NM_001304508, intron 2 of 2)	-15163	NM_004857	9495	Hs.656683	NM_004857	ENSG00000179841	AKAP5	AKAP75|AKAP79|H21	A-kinase anchoring protein 5	protein-coding
13.2667-10	chr6	120826258	120826551	+	0.0666667	NA	Intergenic	HAL1b|LINE|L1	508076	NM_152730	221322	Hs.121396	NM_152730	ENSG00000146350	TBC1D32	BROMI|C6orf170|C6orf171	TBC1 domain family member 32	protein-coding
11.9	chr14	25266075	25266253	+	0.0666667	NA	Intergenic	L1PB2|LINE|L1	-215867	NM_001351940	29091	Hs.508958	NM_014178	ENSG00000168952	STXBP6	HSPC156|amisyn	syntaxin binding protein 6	protein-coding
9.53333-9	chr3	187043360	187043596	+	0.0666667	NA	intron (NM_173216, intron 4 of 7)	intron (NM_173216, intron 4 of 7)	4760	NM_001353916	6480	Hs.207459	NM_003032	ENSG00000073849	ST6GAL1	SIAT1|ST6GalI|ST6N	ST6 beta-galactoside alpha-2,6-sialyltransferase 1	protein-coding
16.7-3	chr10	115742322	115742722	+	0.0666667	NA	intron (NM_207303, intron 27 of 28)	intron (NM_207303, intron 27 of 28)	452267	NR_145811	109623470		NR_145811		SNORD158	-	small nucleolar RNA, C/D box 158	snoRNA
11.6667-12	chrX	83740253	83740429	+	0.0666667	NA	Intergenic	L1M1|LINE|L1	-120785	NM_001271680	1538	Hs.444230	NM_021118	ENSG00000183035	CYLC1	CYCL1	cylicin 1	protein-coding
28.2-3	chr10	111963828	111964507	+	0.0666667	NA	Intergenic	MIRb|SINE|MIR	219598	NM_020918	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
18.5667-11	chr3	109892614	109892968	+	0.0666667	NA	Intergenic	Intergenic	289963	NR_039647	100616129		NR_039647	ENSG00000265956	MIR4445	-	microRNA 4445	ncRNA
31.2333-5	chr3	65309079	65309668	+	0.0666667	NA	Intergenic	Intergenic	-584443	NR_046575	100873983	Hs.663889	NR_046575	ENSG00000240175	MAGI1-AS1	-	MAGI1 antisense RNA 1	ncRNA
13.8667-11	chr9	7002407	7002782	+	0.0666667	NA	intron (NR_148680, intron 13 of 21)	intron (NR_148680, intron 13 of 21)	245244	NM_001304341	23081	Hs.709425	NM_015061	ENSG00000107077	KDM4C	GASC1|JHDM3C|JMJD2C|TDRD14C	lysine demethylase 4C	protein-coding
16.2667-3	chr17	32204468	32204802	+	0.0666667	NA	intron (NM_001033566, intron 16 of 19)	L1ME3|LINE|L1	-53064	NR_002222	503640	Hs.631752	NR_002222		ARGFXP2	-	arginine-fifty homeobox pseudogene 2	pseudo
23.9667-6	chr4	83551834	83552470	+	0.0666667	NA	intron (NM_001256421, intron 3 of 12)	intron (NM_001256421, intron 3 of 12)	16044	NM_032717	84803	Hs.99196	NM_032717	ENSG00000138678	GPAT3	AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1	glycerol-3-phosphate acyltransferase 3	protein-coding
14.0667-2	chr14	68016362	68016711	+	0.0666667	NA	intron (NM_133509, intron 7 of 10)	MER63B|DNA|hAT-Blackjack	192944	NM_001321815	5890	Hs.172587	NM_002877	ENSG00000182185	RAD51B	R51H2|RAD51L1|REC2	RAD51 paralog B	protein-coding
14.9-8	chr3	162619773	162620031	+	0.0666667	NA	Intergenic	L1MA1|LINE|L1	683399	NR_033945	647107	Hs.408584	NR_033945	ENSG00000241369	LINC01192	CT64	long intergenic non-protein coding RNA 1192	ncRNA
8.59999	chr12	100433168	100433392	+	0.0666667	NA	Intergenic	Intergenic	-40586	NM_001206979	9971	Hs.282735	NM_005123	ENSG00000012504	NR1H4	BAR|FXR|HRR-1|HRR1|PFIC5|RIP14	nuclear receptor subfamily 1 group H member 4	protein-coding
8.93334	chr11	114576977	114577135	+	0.0666667	NA	intron (NM_017678, intron 5 of 5)	(TA)n|Simple_repeat|Simple_repeat	-17175	NM_152315	120400	Hs.550126	NM_152315	ENSG00000095110	NXPE1	FAM55A	neurexophilin and PC-esterase domain family member 1	protein-coding
14.2667-11	chr8	114646042	114646302	+	0.0666667	NA	Intergenic	Intergenic	1021841	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding
33.7667-2	chr10	107157346	107157917	+	0.0666667	NA	intron (NM_001206569, intron 1 of 25)	intron (NM_001206569, intron 1 of 25)	7075	NM_001206571	114815	Hs.591915	NM_052918	ENSG00000108018	SORCS1	hSorCS	sortilin related VPS10 domain containing receptor 1	protein-coding
24.7666-3	chr4	99322332	99323073	+	0.0666667	NA	Intergenic	Intergenic	-1301	NM_000668	125	Hs.4	NM_000668	ENSG00000196616	ADH1B	ADH2|HEL-S-117	alcohol dehydrogenase 1B (class I), beta polypeptide	protein-coding
25.3333-5	chr18	77978904	77979566	+	0.0666667	NA	intron (NR_104127, intron 1 of 1)	intron (NR_104127, intron 1 of 1)	14492	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA
5.93334	chr14	47361120	47361210	+	0.0666667	NA	intron (NM_001113498, intron 1 of 16)	L1MA9|LINE|L1	-17919	NR_103766	161357	Hs.436380	NM_182830	ENSG00000139915	MDGA2	MAMDC1|c14_5286	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
15.7667	chr12	2662194	2662663	+	0.0666667	NA	intron (NM_199460, intron 36 of 49).2	L1ME3C|LINE|L1	9792	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA
11.4-2	chr11	79837481	79837676	+	0.0666667	NA	Intergenic	L1MEd|LINE|L1	-396548	NM_001098816	26011	Hs.213087	NM_001098816	ENSG00000149256	TENM4	Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4	teneurin transmembrane protein 4	protein-coding
25.8-22	chr7	15606872	15607276	+	0.0666667	NA	Intergenic	Intergenic	-45059	NM_001004320	392636	Hs.670634	NM_001004320	ENSG00000187546	AGMO	TMEM195	alkylglycerol monooxygenase	protein-coding
35.7-3	chr16	77635313	77636359	+	0.0666667	NA	Intergenic	Intergenic	-86656	NM_001243657	283927	Hs.282665	NM_001105663	ENSG00000140876	NUDT7	-	nudix hydrolase 7	protein-coding
38.7667	chr2	114689820	114690514	+	0.0666667	NA	intron (NM_001321908, intron 2 of 25)	L1PA11|LINE|L1	143381	NR_132105	101927591	Hs.553019	NR_132105	ENSG00000231538	DPP10-AS3	-	DPP10 antisense RNA 3	ncRNA
33.4667	chr14	68492166	68492797	+	0.0666667	NA	intron (NM_001321818, intron 10 of 10)	intron (NM_001321818, intron 10 of 10)	136306	NR_135816	100996664		NR_135816		LOC100996664	-	uncharacterized LOC100996664	ncRNA
14.1333-2	chr11	83896454	83896833	+	0.0666667	NA	intron (NM_001142700, intron 7 of 19)	L1MB8|LINE|L1	-214218	NM_001142702	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding
14.9667-12	chr7	68771019	68771389	+	0.0666667	NA	Intergenic	AluJo|SINE|Alu	750951	NR_120514	102723427	Hs.583491	NR_120514	ENSG00000225209	LOC102723427	-	uncharacterized LOC102723427	ncRNA
13.6-4	chr3	7274448	7274707	+	0.0666667	NA	intron (NM_000844, intron 2 of 9)	L1MCa|LINE|L1	260707	NR_046606	100873937	Hs.570608	NR_046606	ENSG00000236202	GRM7-AS1	-	GRM7 antisense RNA 1	ncRNA
13.2-13	chr6	119871358	119871628	+	0.0666667	NA	Intergenic	Intergenic	-143686	NR_036098	100422951		NR_036098	ENSG00000265725	MIR3144	mir-3144	microRNA 3144	ncRNA
23.7-2	chr10	41877464	41878002	+	0.0666667	NA	Intergenic	(ATGGA)n|Simple_repeat|Simple_repeat	490312	NR_024380	441666	Hs.255729	NR_024380	ENSG00000215146	LOC441666	-	zinc finger protein 91 pseudogene	pseudo
27.9333-9	chrX	78067165	78067700	+	0.0666667	NA	Intergenic	Intergenic	-36816	NM_000291	5230	Hs.78771	NM_000291	ENSG00000102144	PGK1	HEL-S-68p|MIG10|PGKA	phosphoglycerate kinase 1	protein-coding
26.7-4	chr12	69173327	69173800	+	0.0666667	NA	Intergenic	Intergenic	-66006	NM_001300947	11052	Hs.369606	NM_007007	ENSG00000111605	CPSF6	CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7	cleavage and polyadenylation specific factor 6	protein-coding
16.3-5	chr19	41759795	41760096	+	0.0666667	NA	intron (NM_002483, intron 2 of 5)	Tigger4a|DNA|TcMar-Tigger	4415	NM_002483	4680	Hs.466814	NM_002483	ENSG00000086548	CEACAM6	CD66c|CEAL|NCA	carcinoembryonic antigen related cell adhesion molecule 6	protein-coding
13.6-6	chr7	106977690	106978011	+	0.0666667	NA	Intergenic	Intergenic	-66855	NM_002736	5577	Hs.433068	NM_002736	ENSG00000005249	PRKAR2B	PRKAR2|RII-BETA	protein kinase cAMP-dependent type II regulatory subunit beta	protein-coding
32.0333-4	chr16	3172141	3172803	+	0.0666667	NA	Intergenic	Intergenic	-15732	NM_001370640	4992	Hs.664502	NM_012360	ENSG00000168124	OR1F1	OLFMF|OR16-36|OR16-37|OR16-88|OR16-89|OR16-90|OR1F10|OR1F13P|OR1F4|OR1F5|OR1F6|OR1F7|OR1F8|OR1F9|OR3-145|ORL1023	olfactory receptor family 1 subfamily F member 1	protein-coding
23.6667-10	chr5	168046165	168046623	+	0.0666667	NA	intron (NM_001080428, intron 3 of 24)	intron (NM_001080428, intron 3 of 24)	-119451	NR_162139	113219458		NR_162139		MIR12125	-	microRNA 12125	ncRNA
22.5667-3	chr17	56124501	56124899	+	0.0666667	NA	Intergenic	Intergenic	-28775	NM_001365758	162282	Hs.673040	NM_153228	ENSG00000153930	ANKFN1	-	ankyrin repeat and fibronectin type III domain containing 1	protein-coding
13.2333-9	chr3	170832960	170833253	+	0.0666667	NA	Intergenic	Intergenic	37089	NR_135259	200916	Hs.380933	NM_001099645	ENSG00000163584	RPL22L1	-	ribosomal protein L22 like 1	protein-coding
25.6-7	chr4	40728976	40729703	+	0.0666667	NA	Intergenic	AluSz6|SINE|Alu	-20616	NM_024677	79730	Hs.479602	NM_024677	ENSG00000179299	NSUN7	-	NOP2/Sun RNA methyltransferase family member 7	protein-coding
13.2-3	chr16	31270803	31271106	+	0.0666667	NA	exon (NM_000632, exon 6 of 30)	exon (NM_000632, exon 6 of 30)	10979	NM_000632	3684	Hs.172631	NM_000632	ENSG00000169896	ITGAM	CD11B|CR3A|MAC-1|MAC1A|MO1A|SLEB6	integrin subunit alpha M	protein-coding
27.5666-3	chr22	34904108	34904887	+	0.0666667	NA	intron (NR_138042, intron 1 of 4)	MIR|SINE|MIR	93419	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA
18.8-2	chr10	42756106	42756606	+	0.0666667	NA	intron (NR_134498, intron 1 of 1)	intron (NR_134498, intron 1 of 1)	-1153	NR_136644	283028	Hs.448616	NR_136644		LOC283028	-	uncharacterized LOC283028	ncRNA
22.3-4	chr12	113596332	113596762	+	0.0666667	NA	Intergenic	L1MEc|LINE|L1	124544	NR_126425	104355219	Hs.641707	NR_126425		LHX5-AS1	locus 4010|locus4010	LHX5 antisense RNA 1	ncRNA
5.66667	chr20	62997281	62997410	+	0.0666667	NA	Intergenic	Intergenic	9619	NM_080606	128408	Hs.551230	NM_080606	ENSG00000125533	BHLHE23	BETA4|BHLHB4|Beta3b|bA305P22.3	basic helix-loop-helix family member e23	protein-coding
14.8667-8	chr2	153110383	153110761	+	0.0666667	NA	Intergenic	MIR3|SINE|MIR	368190	NM_019845	56475	Hs.100890	NM_019845	ENSG00000177519	RPRM	REPRIMO	reprimo, TP53 dependent G2 arrest mediator homolog	protein-coding
23.4-8	chr4	71557918	71558288	+	0.0666667	NA	intron (NM_003759, intron 19 of 22)	MIRb|SINE|MIR	219050	NM_003759	8671	Hs.5462	NM_003759	ENSG00000080493	SLC4A4	HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC	solute carrier family 4 member 4	protein-coding
15.8	chr1	74004074	74004481	+	0.0666667	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	193899	NM_001322315	127255	Hs.644625	NM_145258	ENSG00000162620	LRRIQ3	LRRC44	leucine rich repeats and IQ motif containing 3	protein-coding
24.2333-9	chr4	74231890	74232482	+	0.0666667	NA	intron (NM_001144978, intron 6 of 7)	intron (NM_001144978, intron 6 of 7)	74068	NM_001004346	441024	Hs.721011	NM_001004346	ENSG00000163738	MTHFD2L	-	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like	protein-coding
8.73334	chr1	176891366	176891497	+	0.0666667	NA	intron (NM_207108, intron 17 of 21)	intron (NM_207108, intron 17 of 21)	138014	NR_030163	574441		NR_030163	ENSG00000202609	MIR488	MIRN488|hsa-mir-488|mir-488	microRNA 488	ncRNA
19.7	chr1	187458532	187459062	+	0.0666667	NA	intron (NR_132374, intron 1 of 2)	intron (NR_132374, intron 1 of 2)	15169	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
4.66667	chr17	81826179	81826249	+	0.0666667	NA	intron (NM_001288799, intron 1 of 3)	intron (NM_001288799, intron 1 of 3)	7077	NM_001288798	348262	Hs.514632	NM_207368	ENSG00000225663	MCRIP1	FAM195B|GRAN2|MCRIP	MAPK regulated corepressor interacting protein 1	protein-coding
17.4667-10	chr3	129518568	129519012	+	0.0666667	NA	intron (NM_052990, intron 24 of 26)	intron (NM_052990, intron 24 of 26)	-9849	NM_000539	6010	Hs.247565	NM_000539	ENSG00000163914	RHO	CSNBAD1|OPN2|RP4	rhodopsin	protein-coding
26.5333-4	chr2	119770240	119770859	+	0.0666667	NA	intron (NM_002830, intron 1 of 26)	L1ME4b|LINE|L1	10627	NM_002830	5775	Hs.469809	NM_002830	ENSG00000088179	PTPN4	MEG|PTPMEG|PTPMEG1	protein tyrosine phosphatase non-receptor type 4	protein-coding
25.8667-2	chr11	62352217	62352815	+	0.0666667	NA	intron (NM_025080, intron 2 of 6)	AluSz|SINE|Alu	15068	NM_025080	80150	Hs.535326	NM_025080	ENSG00000162174	ASRGL1	ALP|ALP1|CRASH	asparaginase like 1	protein-coding
8.86666-3	chr4	63868619	63868868	+	0.0666667	NA	Intergenic	Intergenic	540707	NM_001010874	253017	Hs.227752	NM_001010874	ENSG00000205678	TECRL	CPVT3|GPSN2L|SRD5A2L2|TERL	trans-2,3-enoyl-CoA reductase like	protein-coding
15.7333-7	chr17	63122139	63122454	+	0.0666667	NA	intron (NM_025185, intron 4 of 25)	MER103C|DNA|hAT-Charlie	156061	NM_025185	26115	Hs.410889	NM_015623	ENSG00000170921	TANC2	ROLSA|rols	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	protein-coding
40.2-8	chr8	68428169	68429208	+	0.0666667	NA	intron (NR_146187, intron 1 of 13)	L1ME3B|LINE|L1	-97197	NR_038877	286189	Hs.593427	NR_038877	ENSG00000248801	C8orf34-AS1	-	C8orf34 antisense RNA 1	ncRNA
12.2333-9	chr8	118594128	118594375	+	0.0666667	NA	intron (NR_109794, intron 1 of 4)	Charlie18a|DNA|hAT-Charlie	-26750	NR_038210	552860	Hs.571527	NR_038210	ENSG00000281641	SAMD12-AS1	C8orf26|NCRNA00252	SAMD12 antisense RNA 1	ncRNA
4.3	chr1	170225162	170225254	+	0.0666667	NA	intron (NR_146891, intron 1 of 4)	intron (NR_146891, intron 1 of 4)	50829	NR_146891	105371609	Hs.508115	NR_146891		LINC01681	-	long intergenic non-protein coding RNA 1681	ncRNA
24.0333-10	chr2	223958984	223959547	+	0.0666667	NA	intron (NM_022915, intron 1 of 3)	intron (NM_022915, intron 1 of 3)	1802	NM_022915	65080	Hs.203559	NM_022915	ENSG00000135900	MRPL44	COXPD16|L44MT|MRP-L44	mitochondrial ribosomal protein L44	protein-coding
8.8	chr14	46976644	46976832	+	0.0666667	NA	intron (NM_001113498, intron 8 of 16)	intron (NM_001113498, intron 8 of 16)	-324957	NM_080746	140801	Hs.308332	NM_080746	ENSG00000165496	RPL10L	RPL10_5_1358	ribosomal protein L10 like	protein-coding
22.2333-9	chr2	48499260	48499816	+	0.0666667	NA	intron (NM_001193475, intron 16 of 19)	AluJb|SINE|Alu	-30387	NM_001198593	286749	Hs.732016	NM_172311	ENSG00000068781	STON1-GTF2A1L	ALF|GTF2A1L|GTF2A1LF|SALF	STON1-GTF2A1L readthrough	protein-coding
24.5667-2	chr11	14120302	14120928	+	0.0666667	NA	intron (NM_006108, intron 5 of 15)	intron (NM_006108, intron 5 of 15)	157892	NM_006108	10418	Hs.643864	NM_006108	ENSG00000262655	SPON1	VSGP/F-spondin|f-spondin	spondin 1	protein-coding
22.7667-11	chr22	33063837	33064410	+	0.0666667	NA	Intergenic	MER5B|DNA|hAT-Charlie	-5742	NM_001369909	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding
16.1667-13	chr5	43409302	43409733	+	0.0666667	NA	intron (NM_001301874, intron 1 of 3)	intron (NM_001301874, intron 1 of 3)	2874	NM_148672	56477	Hs.656904	NM_019846	ENSG00000151882	CCL28	CCK1|MEC|SCYA28	C-C motif chemokine ligand 28	protein-coding
12.2333-2	chr10	56920345	56920707	+	0.0666667	NA	Intergenic	AluSc8|SINE|Alu	384033	NR_037490	100500834		NR_037490	ENSG00000264747	MIR3924	-	microRNA 3924	ncRNA
15.1-18	chrX	68958107	68958543	+	0.0666667	NA	Intergenic	L1M4|LINE|L1	129328	NM_004429	1947	Hs.144700	NM_004429	ENSG00000090776	EFNB1	CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2	ephrin B1	protein-coding
25.5333-12	chr6	98566144	98566905	+	0.0666667	NA	Intergenic	Intergenic	265176	NR_148381	105447646	Hs.211213	NR_148381		PNKY	-	long intergenic non-protein coding RNA PNKY	ncRNA
17.7333-8	chr2	62546482	62546905	+	0.0666667	NA	Intergenic	MamGypLTR3a|LTR|Gypsy	-40498	NM_198276	200728	Hs.308028	NM_198276	ENSG00000186889	TMEM17	-	transmembrane protein 17	protein-coding
20.1-5	chr16	9797050	9797523	+	0.0666667	NA	intron (NM_001134408, intron 11 of 13)	intron (NM_001134408, intron 11 of 13)	-341781	NR_126349	104266959	Hs.578888	NR_126349	ENSG00000261075	LINC01195	-	long intergenic non-protein coding RNA 1195	ncRNA
23.9-6	chr20	63293039	63293661	+	0.0666667	NA	intron (NM_020882, intron 1 of 35)	intron (NM_020882, intron 1 of 35)	164	NM_020882	57642	Hs.271285	NM_020882	ENSG00000101203	COL20A1	-	collagen type XX alpha 1 chain	protein-coding
27.6-2	chr11	83335450	83336254	+	0.0666667	NA	Intergenic	Intergenic	-49445	NM_001286117	60492	Hs.368866	NM_021825	ENSG00000137500	CCDC90B	MDS011|MDS025	coiled-coil domain containing 90B	protein-coding
19.2-8	chr20	47992590	47993156	+	0.0666667	NA	Intergenic	Intergenic	-2756	NR_110027	101927457	Hs.445823	NR_110027		LINC01522	-	long intergenic non-protein coding RNA 1522	ncRNA
16.3333-9	chr2	167336833	167337316	+	0.0666667	NA	Intergenic	Intergenic	149702	NM_001199145	129446	Hs.73680	NM_152381	ENSG00000163092	XIRP2	CMYA3	xin actin binding repeat containing 2	protein-coding
8.03333-2	chr13	76179905	76180073	+	0.0666667	NA	Intergenic	L1ME1|LINE|L1	-244857	NR_047491	100861545	Hs.638962	NR_047491	ENSG00000261206	LINC00561	-	long intergenic non-protein coding RNA 561	ncRNA
7.53333-4	chr5	55198983	55199152	+	0.0666667	NA	Intergenic	Intergenic	-25890	NM_001170402	166979	Hs.669184	NM_152623	ENSG00000164287	CDC20B	G6VTS76519	cell division cycle 20B	protein-coding
11.2333-2	chr11	78943399	78943624	+	0.0666667	NA	intron (NM_001098816, intron 6 of 33)	intron (NM_001098816, intron 6 of 33)	-368647	NM_024678	79731	Hs.503389	NM_024678	ENSG00000137513	NARS2	DFNB94|SLM5|asnRS	asparaginyl-tRNA synthetase 2, mitochondrial	protein-coding
8.76667-4	chrUn_GL000216v2	19390	19547	+	0.0666667	NA	NA	(CATTC)n|Satellite|Satellite	NA	NA								
18.0667-8	chr3	10199051	10199518	+	0.0666667	NA	intron (NM_001570, intron 2 of 12)	intron (NM_001570, intron 2 of 12)	34365	NM_001570	3656	Hs.449207	NM_001570	ENSG00000134070	IRAK2	IRAK-2	interleukin 1 receptor associated kinase 2	protein-coding
36.6333-3	chr20	24676143	24676905	+	0.0666667	NA	Intergenic	Intergenic	206563	NR_147606	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding
22-11	chr5	24000582	24001075	+	0.0666667	NA	intron (NR_131245, intron 4 of 4)	intron (NR_131245, intron 4 of 4)	49480	NR_131245	439936	Hs.638078	NR_131245	ENSG00000248874	C5orf17	-	chromosome 5 open reading frame 17 (putative)	ncRNA
9.6-3	chr13	54050288	54050465	+	0.0666667	NA	Intergenic	Intergenic	82495	NR_108063	100507428	Hs.351262	NR_108062	ENSG00000234787	LINC00458	LncRNA-ES3	long intergenic non-protein coding RNA 458	ncRNA
22.1333-18	chr8	86493988	86494474	+	0.0666667	NA	intron (NM_001286719, intron 2 of 8)	intron (NM_001286719, intron 2 of 8)	14455	NM_016033	51115	Hs.145386	NM_016033	ENSG00000176623	RMDN1	CGI-90|FAM82B|RMD-1|RMD1	regulator of microtubule dynamics 1	protein-coding
16.6667-11	chr4	62626484	62626847	+	0.0666667	NA	Intergenic	Intergenic	-464900	NR_110595	101927186	Hs.723269	NR_110595		ADGRL3-AS1	LPHN3-AS1	adhesion G protein-coupled receptor L3 antisense RNA 1	ncRNA
18.1667	chr1	188439523	188439921	+	0.0666667	NA	Intergenic	Intergenic	996094	NR_132374	106144535	Hs.568709	NR_132374		LINC01037	-	long intergenic non-protein coding RNA 1037	ncRNA
25.5667-3	chr10	66986013	66986600	+	0.0666667	NA	intron (NR_111911, intron 1 of 6)	AluSz|SINE|Alu	25847	NR_111911	101928961	Hs.687014	NR_111911		LOC101928961	-	uncharacterized LOC101928961	ncRNA
15.4-23	chr7	55082587	55082927	+	0.0666667	NA	intron (NM_001346941, intron 1 of 21)	MLT1C|LTR|ERVL-MaLR	-27082	NM_001346900	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding
19.3667-7	chr5	4934007	4934493	+	0.0666667	NA	Intergenic	L1MA9|LINE|L1	-100109	NR_026994	340094	Hs.665092	NR_026994	ENSG00000215231	LINC01020	-	long intergenic non-protein coding RNA 1020	ncRNA
19.4333-2	chr11	115239161	115239629	+	0.0666667	NA	intron (NM_001098517, intron 2 of 8)	intron (NM_001098517, intron 2 of 8)	-94182	NR_135108	105369509	Hs.736064	NR_135108		LOC105369509	-	uncharacterized LOC105369509	ncRNA
19.8-21	chr6	84229221	84229710	+	0.0666667	NA	Intergenic	L2|LINE|L2	-1822	NM_001286206	22832	Hs.485865	NM_014895	ENSG00000135315	CEP162	C6orf84|KIAA1009|QN1	centrosomal protein 162	protein-coding
7.29999	chr1	220350456	220350663	+	0.0666667	NA	Intergenic	Intergenic	-78106	NM_012414	25782	Hs.654849	NM_012414	ENSG00000118873	RAB3GAP2	RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150	RAB3 GTPase activating non-catalytic protein subunit 2	protein-coding
32.4-7	chr20	11329548	11330116	+	0.0666667	NA	Intergenic	Intergenic	-56449	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA
18.1333-14	chr6	15244836	15245377	+	0.0666667	NA	promoter-TSS (NM_004973)	promoter-TSS (NM_004973)	-963	NM_004973	3720	Hs.269059	NM_004973	ENSG00000008083	JARID2	JMJ	jumonji and AT-rich interaction domain containing 2	protein-coding
22.9-16	chr7	95749107	95749518	+	0.0666667	NA	Intergenic	Intergenic	-23194	NM_001278421	1780	Hs.440364	NM_004411	ENSG00000158560	DYNC1I1	DNCI1|DNCIC1	dynein cytoplasmic 1 intermediate chain 1	protein-coding
10.3667-4	chr2	43228130	43228371	+	0.0666667	NA	non-coding (NR_027251, exon 1 of 1)	non-coding (NR_027251, exon 1 of 1)	1039	NR_027251	100129726	Hs.194480	NM_178529	ENSG00000279873	LINC01126	-	long intergenic non-protein coding RNA 1126	ncRNA
14.4333-3	chr3	10117823	10118215	+	0.0666667	NA	intron (NM_018462, intron 1 of 2)	AluSx|SINE|Alu	2344	NM_018462	55845	Hs.649307	NM_018462	ENSG00000254999	BRK1	C3orf10|HSPC300|MDS027|hHBrk1	BRICK1 subunit of SCAR/WAVE actin nucleating complex	protein-coding
16.8333-3	chr12	104197554	104198051	+	0.0666667	NA	Intergenic	L1MA4|LINE|L1	-17977	NM_001093771	7296	Hs.654922	NM_003330	ENSG00000198431	TXNRD1	GRIM-12|TR|TR1|TRXR1|TXNR	thioredoxin reductase 1	protein-coding
33.1-2	chr2	9802876	9803372	+	0.0666667	NA	Intergenic	Intergenic	-40318	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	TATA-box binding protein associated factor, RNA polymerase I subunit B	protein-coding
21.2-5	chr12	30300730	30301212	+	0.0666667	NA	Intergenic	AluSc8|SINE|Alu	376273	NM_001190995	10526	Hs.505136	NM_006390	ENSG00000133704	IPO8	RANBP8	importin 8	protein-coding
4.9	chr18	55569991	55570064	+	0.0666667	NA	intron (NM_001348217, intron 2 of 18)	L1MEd|LINE|L1	16092	NM_001348220	6925	Hs.605153	NM_003199	ENSG00000196628	TCF4	E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19	transcription factor 4	protein-coding
20.9-16	chr3	192911239	192911552	+	0.0666667	NA	intron (NM_178496, intron 1 of 1)	intron (NM_178496, intron 1 of 1)	6461	NM_178496	151963	Hs.151443	NM_178496	ENSG00000180611	MB21D2	C3orf59	Mab-21 domain containing 2	protein-coding
27.3667	chr1	81799717	81800307	+	0.0666667	NA	promoter-TSS (NM_001350699)	promoter-TSS (NM_001350699)	-364	NM_001366005	23266	Hs.24212	NM_012302	ENSG00000117114	ADGRL2	CIRL2|CL2|LEC1|LPHH1|LPHN2	adhesion G protein-coupled receptor L2	protein-coding
14.3-16	chr8	87559115	87559480	+	0.0666667	NA	Intergenic	L1PA13|LINE|L1	314718	NM_152418	138009	Hs.371738	NM_152418	ENSG00000176566	DCAF4L2	WDR21C	DDB1 and CUL4 associated factor 4 like 2	protein-coding
24.8667-9	chr6	62975424	62975948	+	0.0666667	NA	Intergenic	Intergenic	344291	NM_001143940	51557	Hs.149585	NM_016571	ENSG00000146166	LGSN	GLULD1|LGS	lengsin, lens protein with glutamine synthetase domain	protein-coding
18.1667-2	chr1	226519665	226520161	+	0.0666667	NA	Intergenic	Intergenic	-28851	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	stum, mechanosensory transduction mediator homolog	protein-coding
24.9	chr1	220615893	220616423	+	0.0666667	NA	intron (NM_018650, intron 7 of 17)	MIRb|SINE|MIR	-74205	NM_024709	79762	Hs.519839	NM_024709	ENSG00000162817	C1orf115	-	chromosome 1 open reading frame 115	protein-coding
27.0666	chr22	38306624	38307366	+	0.0666667	NA	intron (NM_001894, intron 2 of 10)	AluJo|SINE|Alu	10438	NM_152221	1454	Hs.474833	NM_001894	ENSG00000213923	CSNK1E	CKIe|CKIepsilon|HCKIE	casein kinase 1 epsilon	protein-coding
20.3667-12	chr9	24223314	24223703	+	0.0666667	NA	Intergenic	L1ME3B|LINE|L1	322168	NM_001271706	100129669	Hs.573530	NM_001271706	ENSG00000205442	IZUMO3	C9orf134|bA20A20.1	IZUMO family member 3	protein-coding
7.53333	chr10	122503964	122504146	+	0.0666667	NA	intron (NM_002775, intron 3 of 8)	intron (NM_002775, intron 3 of 8)	42502	NM_002775	5654	Hs.501280	NM_002775	ENSG00000166033	HTRA1	ARMD7|CADASIL2|CARASIL|HtrA|L56|ORF480|PRSS11	HtrA serine peptidase 1	protein-coding
11.6-5	chr16	69824904	69825121	+	0.0666667	NA	intron (NM_001270455, intron 4 of 8)	AluSx|SINE|Alu	-13725	NM_001270453	11060	Hs.408458	NM_007014	ENSG00000198373	WWP2	AIP2|WWp2-like	WW domain containing E3 ubiquitin protein ligase 2	protein-coding
22.5-13	chrX	116436311	116436898	+	0.0666667	NA	promoter-TSS (NM_007231)	promoter-TSS (NM_007231)	-2	NM_007231	11254	Hs.522109	NM_007231	ENSG00000268104	SLC6A14	BMIQ11	solute carrier family 6 member 14	protein-coding
22.4667-7	chr3	87135580	87136118	+	0.0666667	NA	intron (NR_104153, intron 1 of 2)	intron (NR_104153, intron 1 of 2)	46569	NR_047469	100846978	Hs.570649	NR_047469	ENSG00000281392	LINC00506	-	long intergenic non-protein coding RNA 506	ncRNA
22.9666-4	chr15	68514684	68515329	+	0.0666667	NA	Intergenic	Kanga1|DNA|TcMar-Tc2	-3367	NM_001324014	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding
18.2333-14	chr8	130727573	130728110	+	0.0666667	NA	Intergenic	L2a|LINE|L2	-284167	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	protein-coding
21.4667-4	chr14	101810037	101810526	+	0.0666667	NA	intron (NM_178586, intron 1 of 12)	intron (NM_178586, intron 1 of 12)	418	NM_001352912	5527	Hs.368264	NM_002719	ENSG00000078304	PPP2R5C	B56G|B56gamma|PR61G	protein phosphatase 2 regulatory subunit B'gamma	protein-coding
21.8-9	chr20	2468829	2469349	+	0.0666667	NA	intron (NM_003091, intron 1 of 6)	MIR|SINE|MIR	1700	NM_198216	6628	Hs.83753	NM_003091	ENSG00000125835	SNRPB	CCMS|COD|SNRPB1|Sm-B/B'|SmB/B'|SmB/SmB'|snRNP-B	small nuclear ribonucleoprotein polypeptides B and B1	protein-coding
25.9-6	chr3	120298691	120299212	+	0.0666667	NA	Intergenic	Intergenic	50403	NM_001099678	116064	Hs.518084	NM_001099678	ENSG00000163428	LRRC58	-	leucine rich repeat containing 58	protein-coding
16.6-6	chr22	23060073	23060500	+	0.0666667	NA	intron (NM_014433, intron 6 of 6)	AluY|SINE|Alu	-10233	NM_002073	2781	Hs.584760	NM_002073	ENSG00000128266	GNAZ	gz-alpha	G protein subunit alpha z	protein-coding
23.0333-11	chr4	105779626	105780228	+	0.0666667	NA	intron (NM_001370181, intron 5 of 11)	intron (NM_001370181, intron 5 of 11)	47245	NR_125927	101929529	Hs.603751	NR_125927	ENSG00000251175	LOC101929529	-	uncharacterized LOC101929529	ncRNA
9.9	chr18	67156614	67156856	+	0.0666667	NA	Intergenic	Intergenic	75151	NR_049809	100847002		NR_049809	ENSG00000263354	MIR5011	-	microRNA 5011	ncRNA
9.66666	chr1	99760377	99760639	+	0.0666667	NA	intron (NM_001361041, intron 1 of 16)	intron (NM_001361041, intron 1 of 16)	5285	NM_001013660	391059	Hs.454779	NM_001013660	ENSG00000156869	FRRS1	SDFR2|SDR2	ferric chelate reductase 1	protein-coding
8.26667	chr1	114800811	114800938	+	0.0666667	NA	Intergenic	Intergenic	-20189	NR_049741	80143	Hs.709277	NM_025073	ENSG00000052723	SIKE1	SIKE	suppressor of IKBKE 1	protein-coding
15.7333-9	chr20	47309489	47309810	+	0.0666667	NA	intron (NM_001281774, intron 4 of 23)	MIR3|SINE|MIR	-8853	NR_024594	100131496	Hs.662547	NR_024594	ENSG00000267882	LOC100131496	-	uncharacterized LOC100131496	ncRNA
20.6667-11	chr20	39590489	39590905	+	0.0666667	NA	Intergenic	L1ME3Cz|LINE|L1	-365949	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA
18.0667-13	chr6	169155613	169156044	+	0.0666667	NA	Intergenic	L2a|LINE|L2	6473	NR_132622	101929484	Hs.364166	NR_132622	ENSG00000223485	LINC01615	-	long intergenic non-protein coding RNA 1615	ncRNA
10.2-8	chr7	156417358	156417658	+	0.0666667	NA	Intergenic	Intergenic	28080	NR_038232	285889	Hs.407095	NR_038232	ENSG00000182648	LOC285889	-	uncharacterized LOC285889	ncRNA
5	chr18	63331213	63331288	+	0.0666667	NA	3' UTR (NM_002035, exon 10 of 10)	3' UTR (NM_002035, exon 10 of 10)	-11870	NM_000657	596	Hs.150749	NM_000633	ENSG00000171791	BCL2	Bcl-2|PPP1R50	BCL2 apoptosis regulator	protein-coding
24.4-4	chr10	48858996	48859584	+	0.0666667	NA	intron (NM_020945, intron 39 of 61)	L1MDa|LINE|L1	54945	NM_001006939	474354	Hs.202438	NM_001006939	ENSG00000165383	LRRC18	UNQ933|UNQ9338|VKGE9338	leucine rich repeat containing 18	protein-coding
31.2-14	chr3	105871886	105872532	+	0.0666667	NA	Intergenic	Intergenic	-2808	NR_135810	868	Hs.430589	NM_170662	ENSG00000114423	CBLB	Cbl-b|Nbla00127|RNF56	Cbl proto-oncogene B	protein-coding
6.9	chr1	169359038	169359193	+	0.0666667	NA	intron (NR_104229, intron 1 of 12)	MER2|DNA|TcMar-Tigger	8682	NM_013330	29922	Hs.706952	NM_013330	ENSG00000143156	NME7	CFAP67|MN23H7|NDK 7|NDK7|nm23-H7	NME/NM23 family member 7	protein-coding
18.6333-12	chr21	24961294	24961719	+	0.0666667	NA	intron (NR_046198, intron 2 of 3)	intron (NR_046198, intron 2 of 3)	120956	NR_046198	339622	Hs.616316	NR_046198	ENSG00000226983	LINC01692	-	long intergenic non-protein coding RNA 1692	ncRNA
11.7667-5	chr14	105067279	105067614	+	0.0666667	NA	Intergenic	Intergenic	-2016	NM_001278695	29933	Hs.532504	NM_013345	ENSG00000183484	GPR132	G2A	G protein-coupled receptor 132	protein-coding
13.4667-6	chr4	16007412	16007645	+	0.0666667	NA	intron (NM_001371408, intron 11 of 24)	intron (NM_001371408, intron 11 of 24)	-44353	NM_031950	83888	Hs.98785	NM_031950	ENSG00000137441	FGFBP2	HBP17RP|KSP37	fibroblast growth factor binding protein 2	protein-coding
17.5333-16	chr6	48643433	48643898	+	0.0666667	NA	Intergenic	MER67D|LTR|ERV1	-574976	NM_207499	442213	Hs.659409	NM_207499	ENSG00000244694	PTCHD4	C6orf138|PTCH53|dJ402H5.2	patched domain containing 4	protein-coding
19.3667-8	chr7	69029013	69029531	+	0.0666667	NA	Intergenic	Intergenic	568352	NR_108105	100507468	Hs.362492	NR_108105		CT66	-	cancer/testis associated transcript 66	ncRNA
17.6667	chr1	181648060	181648454	+	0.0666667	NA	intron (NM_001205293, intron 6 of 47)	L2b|LINE|L2	164740	NM_001205294	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding
16.3667-7	chr3	39905323	39905705	+	0.0666667	NA	intron (NM_001284424, intron 2 of 15)	HAL1ME|LINE|L1	95854	NM_001284425	25924	Hs.594535	NM_015460	ENSG00000170011	MYRIP	SLAC2-C|SLAC2C	myosin VIIA and Rab interacting protein	protein-coding
14.8333-14	chr9	25561838	25562060	+	0.0666667	NA	Intergenic	MER4A1_|LTR|ERV1	116909	NM_001004125	286319	Hs.26268	NM_001004125	ENSG00000198680	TUSC1	CCDC89B|TSG-9|TSG9	tumor suppressor candidate 1	protein-coding
17.2667-14	chr2	113709764	113710113	+	0.0666667	NA	non-coding (NR_104470, exon 17 of 17)	non-coding (NR_104470, exon 17 of 17)	11430	NR_039943	100616208		NR_039943	ENSG00000265429	MIR4782	-	microRNA 4782	ncRNA
29.7-11	chr5	161919020	161919719	+	0.0666667	NA	intron (NR_126372, intron 2 of 2)	MIRb|SINE|MIR	68644	NM_001127648	2554	Hs.175934	NM_000806	ENSG00000022355	GABRA1	ECA4|EIEE19|EJM|EJM5	gamma-aminobutyric acid type A receptor alpha1 subunit	protein-coding
14.5	chr11	37269190	37269493	+	0.0666667	NA	Intergenic	Intergenic	-669260	NR_135110	105376633	Hs.135690	NR_135110	ENSG00000254516	LINC02760	-	long intergenic non-protein coding RNA 2760	ncRNA
26.2333-7	chr15	69686548	69687063	+	0.0666667	NA	intron (NR_126437, intron 5 of 5)	intron (NR_126437, intron 5 of 5)	94605	NR_126437	104472713	Hs.430824	NR_126437	ENSG00000245750	PCAT29	-	prostate cancer associated transcript 29	ncRNA
6.53333-2	chr15	96130575	96130767	+	0.0666667	NA	intron (NR_125738, intron 4 of 4)	L2c|LINE|L2	-2830	NR_158193	105369212		NR_158193		LOC105369212	-	uncharacterized LOC105369212	ncRNA
5.36666	chr3	108128017	108128150	+	0.0666667	NA	intron (NR_110028, intron 1 of 2)	intron (NR_110028, intron 1 of 2)	2262	NR_110028	101929623	Hs.570653	NR_110028	ENSG00000271856	LINC01215	-	long intergenic non-protein coding RNA 1215	ncRNA
12.7667-7	chrX	88677522	88677877	+	0.0666667	NA	Intergenic	Intergenic	-69526	NM_033048	53336	Hs.458292	NM_033048	ENSG00000147183	CPXCR1	CT77	CPX chromosome region candidate 1	protein-coding
27.4333-7	chr18	39580731	39581249	+	0.0666667	NA	intron (NR_024391, intron 2 of 3)	intron (NR_024391, intron 2 of 3)	41185	NR_030628	100126323		NR_030628	ENSG00000283615	MIR924	MIRN924|hsa-mir-924	microRNA 924	ncRNA
28.4667-3	chr11	43614578	43615232	+	0.0666667	NA	Intergenic	L1MEf|LINE|L1	33511	NR_029697	406918		NR_029697	ENSG00000199077	MIR129-2	MIR-129b|MIRN129-2|mir-129-2	microRNA 129-2	ncRNA
18.8333-13	chr4	155692438	155692905	+	0.0666667	NA	intron (NM_000856, intron 3 of 10)	intron (NM_000856, intron 3 of 10)	25009	NM_001130684	2982	Hs.24258	NM_000856	ENSG00000164116	GUCY1A1	GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A3|MYMY6	guanylate cyclase 1 soluble subunit alpha 1	protein-coding
20.8333-11	chr22	27327397	27327884	+	0.0666667	NA	Intergenic	L2a|LINE|L2	16989	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LINC02554	-	long intergenic non-protein coding RNA 2554	ncRNA
21.2-7	chr14	45533435	45533816	+	0.0666667	NA	Intergenic	L1PA10|LINE|L1	181977	NR_146546	105370479		NR_146546	ENSG00000258616	LINC02303	-	long intergenic non-protein coding RNA 2303	ncRNA
22.7667-16	chr7	6619647	6620174	+	0.0666667	NA	intron (NM_001353546, intron 2 of 2)	FLAM_C|SINE|Alu	4300	NM_017560	54753	Hs.592170	NM_017560	ENSG00000236609	ZNF853	-	zinc finger protein 853	protein-coding
16.6333-13	chr8	124340107	124340486	+	0.0666667	NA	intron (NM_194291, intron 1 of 6)	MER34B-int|LTR|ERV1	32403	NM_194291	157378	Hs.100691	NM_194291	ENSG00000164983	TMEM65	-	transmembrane protein 65	protein-coding
18.7333-24	chr9	130066238	130066694	+	0.0666667	NA	intron (NM_020960, intron 1 of 17)	intron (NM_020960, intron 1 of 17)	12560	NM_020960	57720	Hs.512461	NM_020960	ENSG00000148358	GPR107	GCDRP|LUSTR1|bA138E2.2	G protein-coupled receptor 107	protein-coding
6.76666	chr2	42378573	42378742	+	0.0666667	NA	Intergenic	Intergenic	-9700	NM_001319036	9167	Hs.339639	NM_004718	ENSG00000115944	COX7A2L	COX7AR|COX7RP|EB1|SIG81	cytochrome c oxidase subunit 7A2 like	protein-coding
6.89999-2	chr10	66367252	66367444	+	0.0666667	NA	intron (NM_001127384, intron 12 of 17)	LTR108c_Mam|LTR|ERVL	-558688	NM_178011	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding
12.5333-3	chr8	58089062	58089395	+	0.0666667	NA	intron (NM_147189, intron 4 of 4)	intron (NM_147189, intron 4 of 4)	94705	NM_147189	90362	Hs.154652	NM_147189	ENSG00000169122	FAM110B	C8orf72	family with sequence similarity 110 member B	protein-coding
16.6333-11	chr7	23987431	23987747	+	0.0666667	NA	Intergenic	L1PB3|LINE|L1	277370	NM_032944	56164	Hs.309767	NM_031414	ENSG00000196335	STK31	SGK396|TDRD8	serine/threonine kinase 31	protein-coding
17.5333-7	chr19	32152320	32152720	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-46604	NR_110694	101927411	Hs.515337	NR_110694	ENSG00000267204	LINC01782	-	long intergenic non-protein coding RNA 1782	ncRNA
14.2667-9	chr3	69493896	69494310	+	0.0666667	NA	Intergenic	AluJr|SINE|Alu	-108015	NM_015123	23150	Hs.371681	NM_015123	ENSG00000114541	FRMD4B	6030440G05Rik|GRSP1	FERM domain containing 4B	protein-coding
4.93333	chr12	111435589	111435729	+	0.0666667	NA	intron (NM_001291424, intron 1 of 6)	intron (NM_001291424, intron 1 of 6)	797	NM_001291424	10019	Hs.506784	NM_005475	ENSG00000111252	SH2B3	IDDM20|LNK	SH2B adaptor protein 3	protein-coding
13.5333-22	chrX	98438026	98438229	+	0.0666667	NA	Intergenic	L1MA1|LINE|L1	-873592	NR_125391	10824	Hs.654372	NR_125391	ENSG00000236256	DIAPH2-AS1	EPAG	DIAPH2 antisense RNA 1	ncRNA
29.6333-3	chr15	77510251	77510951	+	0.0666667	NA	Intergenic	Intergenic	-14994	NR_135692	101929457	Hs.637111	NR_135692	ENSG00000259362	LOC101929457	-	uncharacterized LOC101929457	ncRNA
5.66666	chr15	81176013	81176164	+	0.0666667	NA	Intergenic	Intergenic	-20791	NM_001172128	3603	Hs.459095	NM_004513	ENSG00000172349	IL16	LCF|NIL16|PRIL16|prIL-16	interleukin 16	protein-coding
20.3333-14	chr2	123139874	123140407	+	0.0666667	NA	Intergenic	Intergenic	-66659	NR_147208	107985818	Hs.580182	NR_147208	ENSG00000232740	LINC01826	lnc-MKI67IP-3	long intergenic non-protein coding RNA 1826	ncRNA
20.8333-2	chr10	72668384	72668855	+	0.0666667	NA	Intergenic	AluJr4|SINE|Alu	-23512	NM_138357	90550	Hs.591366	NM_138357	ENSG00000156026	MCU	C10orf42|CCDC109A|HsMCU	mitochondrial calcium uniporter	protein-coding
15.2333-4	chr15	96864083	96864316	+	0.0666667	NA	Intergenic	Intergenic	80764	NR_158221	145946	Hs.326528	NM_173499	ENSG00000185594	SPATA8	SRG8	spermatogenesis associated 8	ncRNA
24.9667	chr11	6338929	6339561	+	0.0666667	NA	Intergenic	LTR8|LTR|ERV1	-18744	NM_145040	112464	Hs.434044	NM_145040	ENSG00000170955	CAVIN3	HSRBC|PRKCDBP|SRBC|cavin-3	caveolae associated protein 3	protein-coding
18.9667-8	chr4	112742273	112742761	+	0.0666667	NA	intron (NM_001354269, intron 1 of 43)	intron (NM_001354269, intron 1 of 43)	36499	NM_001354269	287	Hs.620557	NM_001148	ENSG00000145362	ANK2	ANK-2|LQT4|brank-2	ankyrin 2	protein-coding
12.3333-7	chr2	144764809	144765158	+	0.0666667	NA	intron (NR_033870, intron 1 of 4)	intron (NR_033870, intron 1 of 4)	97016	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41	ncRNA
14.9333-2	chr1	216680492	216680889	+	0.0666667	NA	intron (NM_001134285, intron 3 of 8)	intron (NM_001134285, intron 3 of 8)	42739	NM_001243518	2104	Hs.444225	NM_001438	ENSG00000196482	ESRRG	ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3	estrogen related receptor gamma	protein-coding
21.3333-12	chr9	104088589	104089127	+	0.0666667	NA	intron (NR_121580, intron 1 of 2)	L2c|LINE|L2	3616	NR_121580	101928550	Hs.144722	NR_121580	ENSG00000270332	SMC2-AS1	-	SMC2 antisense RNA 1 (head to head)	ncRNA
12.1667-4	chr2	219333875	219334195	+	0.0666667	NA	promoter-TSS (NM_001007089)	promoter-TSS (NM_001007089)	-858	NM_001007089	389075	Hs.290551	NM_001007089	ENSG00000182698	RESP18	-	regulated endocrine specific protein 18	protein-coding
25.2333-9	chr5	81521044	81521526	+	0.0666667	NA	intron (NM_012446, intron 4 of 16)	L1M6|LINE|L1	-127151	NM_130767	134526	Hs.591756	NM_130767	ENSG00000172497	ACOT12	CACH-1|Cach|STARD15|THEAL	acyl-CoA thioesterase 12	protein-coding
22.7-8	chr7	29205991	29206420	+	0.0666667	NA	intron (NR_120522, intron 1 of 2)	intron (NR_120522, intron 1 of 2)	2765	NR_120522	102724484	Hs.638665	NR_120522		LOC102724484	-	uncharacterized LOC102724484	ncRNA
18.3667-9	chr4	165927951	165928408	+	0.0666667	NA	intron (NM_001204760, intron 1 of 9)	intron (NM_001204760, intron 1 of 9)	54942	NM_012464	7092	Hs.106513	NM_012464	ENSG00000038295	TLL1	ASD6|TLL	tolloid like 1	protein-coding
14.7333-7	chr22	27193612	27193995	+	0.0666667	NA	Intergenic	L2c|LINE|L2	6287	NM_001318392	105372977	Hs.743180	NM_001318392		LOC105372977	-	uncharacterized LOC105372977	protein-coding
31.8667-3	chr11	124846016	124846534	+	0.0666667	NA	Intergenic	Intergenic	-19157	NM_022370	64221	Hs.435621	NM_022370	ENSG00000154134	ROBO3	HGPPS|HGPPS1|HGPS|RBIG1|RIG1	roundabout guidance receptor 3	protein-coding
25.4333-7	chr2	46037859	46038529	+	0.0666667	NA	intron (NM_005400, intron 10 of 14)	intron (NM_005400, intron 10 of 14)	-259213	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding
7.93333	chr1	185511530	185511705	+	0.0666667	NA	Intergenic	Intergenic	116871	NR_110793	101929093	Hs.535227	NR_110793	ENSG00000228309	LINC01350	GS1-204I12.1	long intergenic non-protein coding RNA 1350	ncRNA
6	chr6	66817373	66817464	+	0.0666667	NA	Intergenic	Intergenic	1029539	NR_026540	442229	Hs.390414	NR_026540		SLC25A51P1	MCART3P|bA707M13.1	SLC25A51 pseudogene 1	pseudo