2083498 reads; of these: 2083498 (100.00%) were paired; of these: 2019882 (96.95%) aligned concordantly 0 times 53567 (2.57%) aligned concordantly exactly 1 time 10049 (0.48%) aligned concordantly >1 times ---- 2019882 pairs aligned concordantly 0 times; of these: 264 (0.01%) aligned discordantly 1 time ---- 2019618 pairs aligned 0 times concordantly or discordantly; of these: 4039236 mates make up the pairs; of these: 4028996 (99.75%) aligned 0 times 8176 (0.20%) aligned exactly 1 time 2064 (0.05%) aligned >1 times 3.31% overall alignment rate [bam_sort_core] merging from 1 files and 1 in-memory blocks...