Name | Last modified | Size | Description | |
---|---|---|---|---|
Parent Directory | - | |||
xx.fa.fai | 2023-08-23 16:20 | 44 | ||
xx.fa | 2023-08-23 16:20 | 86 | ||
xx#unsorted.sam | 2023-08-23 16:20 | 320 | ||
xx#triplet.sam | 2023-08-23 16:20 | 267 | ||
xx#tlen2.sam | 2023-08-23 16:20 | 1.1K | ||
xx#tlen.sam | 2023-08-23 16:20 | 1.0K | ||
xx#rg.sam | 2023-08-23 16:20 | 517 | ||
xx#repeated.sam | 2023-08-23 16:20 | 298 | ||
xx#pair.sam | 2023-08-23 16:20 | 304 | ||
xx#minimal.sam | 2023-08-23 16:20 | 254 | ||
xx#large_aux_java.cram | 2023-08-23 16:20 | 22K | ||
xx#large_aux2.sam | 2023-08-23 16:20 | 651 | ||
xx#large_aux.sam | 2023-08-23 16:20 | 884K | ||
xx#blank.sam | 2023-08-23 16:20 | 71 | ||
xx#MD2.sam | 2023-08-23 16:20 | 1.1K | ||
xx#MD.sam | 2023-08-23 16:20 | 1.0K | ||
with-shlib.sh | 2023-08-23 16:20 | 2.1K | ||
vcf_meta_meta.vcf | 2023-08-23 16:20 | 427 | ||
thread_pool.md | 2023-08-23 16:20 | 2.9K | ||
thrash_threads7.c | 2023-08-23 16:20 | 3.6K | ||
thrash_threads6.c | 2023-08-23 16:20 | 3.3K | ||
thrash_threads5.c | 2023-08-23 16:20 | 2.1K | ||
thrash_threads4.c | 2023-08-23 16:20 | 2.2K | ||
thrash_threads3.c | 2023-08-23 16:20 | 1.7K | ||
thrash_threads2.c | 2023-08-23 16:20 | 1.6K | ||
thrash_threads1.c | 2023-08-23 16:20 | 1.6K | ||
test_view.c | 2023-08-23 16:20 | 15K | ||
test_time_funcs.c | 2023-08-23 16:20 | 4.5K | ||
test_str2int.c | 2023-08-23 16:20 | 8.7K | ||
test_realn.c | 2023-08-23 16:20 | 4.9K | ||
test_mod.c | 2023-08-23 16:20 | 7.4K | ||
test_kstring.c | 2023-08-23 16:20 | 12K | ||
test_kfunc.c | 2023-08-23 16:20 | 3.6K | ||
test_introspection.c | 2023-08-23 16:20 | 3.2K | ||
test_index.c | 2023-08-23 16:20 | 2.8K | ||
test_faidx.c | 2023-08-23 16:20 | 16K | ||
test_expr.c | 2023-08-23 16:20 | 12K | ||
test_bgzf.c | 2023-08-23 16:20 | 35K | ||
test.pl | 2023-08-23 16:20 | 46K | ||
test-vcf-sweep.out | 2023-08-23 16:20 | 92 | ||
test-vcf-sweep.c | 2023-08-23 16:20 | 3.8K | ||
test-vcf-hdr.out | 2023-08-23 16:20 | 1.3K | ||
test-vcf-hdr-in.vcf | 2023-08-23 16:20 | 2.0K | ||
test-vcf-api.out | 2023-08-23 16:20 | 2.0K | ||
test-vcf-api.c | 2023-08-23 16:20 | 25K | ||
test-regidx.c | 2023-08-23 16:20 | 17K | ||
test-parse-reg.c | 2023-08-23 16:20 | 6.9K | ||
test-logging.pl | 2023-08-23 16:20 | 2.5K | ||
test-bcf_set_variant..> | 2023-08-23 16:20 | 3.9K | ||
test-bcf-translate.out | 2023-08-23 16:20 | 869 | ||
test-bcf-translate.c | 2023-08-23 16:20 | 8.8K | ||
test-bcf-sr.pl | 2023-08-23 16:20 | 17K | ||
test-bcf-sr.c | 2023-08-23 16:20 | 9.3K | ||
tabix/ | 2023-08-23 16:20 | - | ||
tabix.out | 2023-08-23 16:20 | 98 | ||
simple_test_driver.sh | 2023-08-23 16:20 | 5.6K | ||
sam_filter/ | 2023-08-23 16:20 | - | ||
sam.c | 2023-08-23 16:20 | 80K | ||
realn03_exp.sam | 2023-08-23 16:20 | 172 | ||
realn03.sam | 2023-08-23 16:20 | 138 | ||
realn03.fa.fai | 2023-08-23 16:20 | 14 | ||
realn03.fa | 2023-08-23 16:20 | 16 | ||
realn02_exp.sam | 2023-08-23 16:20 | 3.7K | ||
realn02_exp-e.sam | 2023-08-23 16:20 | 3.7K | ||
realn02_exp-a.sam | 2023-08-23 16:20 | 3.7K | ||
realn02.sam | 2023-08-23 16:20 | 2.8K | ||
realn02.fa.fai | 2023-08-23 16:20 | 17 | ||
realn02.fa | 2023-08-23 16:20 | 4.2K | ||
realn02-r.sam | 2023-08-23 16:20 | 3.7K | ||
realn01_exp.sam | 2023-08-23 16:20 | 2.1K | ||
realn01_exp-e.sam | 2023-08-23 16:20 | 2.1K | ||
realn01_exp-a.sam | 2023-08-23 16:20 | 2.1K | ||
realn01.sam | 2023-08-23 16:20 | 1.8K | ||
realn01.fa.fai | 2023-08-23 16:20 | 21 | ||
realn01.fa | 2023-08-23 16:20 | 719 | ||
range.out | 2023-08-23 16:20 | 3.4K | ||
range.cram.crai | 2023-08-23 16:20 | 94 | ||
range.cram | 2023-08-23 16:20 | 11K | ||
range.bam.bai | 2023-08-23 16:20 | 360 | ||
range.bam | 2023-08-23 16:20 | 13K | ||
plugins-dlhts.c | 2023-08-23 16:20 | 5.0K | ||
pileup_mod.c | 2023-08-23 16:20 | 7.0K | ||
pileup.c | 2023-08-23 16:20 | 6.8K | ||
noroundtrip.vcf | 2023-08-23 16:20 | 271 | ||
noroundtrip-out.vcf | 2023-08-23 16:20 | 325 | ||
no_hdr_sq_1.expected..> | 2023-08-23 16:20 | 2.0K | ||
no_hdr_sq_1.bam.csi | 2023-08-23 16:20 | 94 | ||
no_hdr_sq_1.bam | 2023-08-23 16:20 | 1.7K | ||
mpileup/ | 2023-08-23 16:20 | - | ||
modhdr.vcf.gz.csi | 2023-08-23 16:20 | 86 | ||
modhdr.vcf.gz | 2023-08-23 16:20 | 156 | ||
modhdr.expected.vcf | 2023-08-23 16:20 | 148 | ||
md.fa.fai | 2023-08-23 16:20 | 13 | ||
md.fa | 2023-08-23 16:20 | 45 | ||
md#1.sam | 2023-08-23 16:20 | 1.0K | ||
maintainer/ | 2023-08-23 16:20 | - | ||
longrefs/ | 2023-08-23 16:20 | - | ||
index_dos.sam | 2023-08-23 16:20 | 53K | ||
index2.sam | 2023-08-23 16:20 | 477 | ||
index.vcf.gz.tbi | 2023-08-23 16:20 | 206 | ||
index.vcf.gz.csi | 2023-08-23 16:20 | 168 | ||
index.vcf | 2023-08-23 16:20 | 67K | ||
index.sam.gz.csi | 2023-08-23 16:20 | 130 | ||
index.sam.gz.bai | 2023-08-23 16:20 | 776 | ||
index.sam | 2023-08-23 16:20 | 53K | ||
index.cram.crai | 2023-08-23 16:20 | 83 | ||
index.bcf.csi | 2023-08-23 16:20 | 144 | ||
index.bam.csi | 2023-08-23 16:20 | 130 | ||
index.bam.bai | 2023-08-23 16:20 | 776 | ||
hts_endian.c | 2023-08-23 16:20 | 17K | ||
hfile.c | 2023-08-23 16:20 | 12K | ||
header_syms.pl | 2023-08-23 16:20 | 3.5K | ||
fuzz/ | 2023-08-23 16:20 | - | ||
formatmissing.vcf | 2023-08-23 16:20 | 226 | ||
formatmissing-out.vcf | 2023-08-23 16:20 | 226 | ||
formatcols.vcf | 2023-08-23 16:20 | 241 | ||
fieldarith.sam | 2023-08-23 16:20 | 910 | ||
fieldarith.c | 2023-08-23 16:20 | 2.4K | ||
fastqs_README.txt | 2023-08-23 16:20 | 4.8K | ||
fastq/ | 2023-08-23 16:20 | - | ||
faidx/ | 2023-08-23 16:20 | - | ||
emptyfile | 2023-08-23 16:20 | 0 | ||
cross_validate.sh | 2023-08-23 16:20 | 4.2K | ||
compare_sam.pl | 2023-08-23 16:20 | 6.3K | ||
colons.bam.bai | 2023-08-23 16:20 | 424 | ||
colons.bam | 2023-08-23 16:20 | 268 | ||
ce.fa.fai | 2023-08-23 16:20 | 230 | ||
ce.fa | 2023-08-23 16:20 | 1.0M | ||
ce#unmap2.sam | 2023-08-23 16:20 | 5.4K | ||
ce#unmap1.sam | 2023-08-23 16:20 | 2.7K | ||
ce#unmap.sam | 2023-08-23 16:20 | 1.3K | ||
ce#tag_padded.sam | 2023-08-23 16:20 | 1.6K | ||
ce#tag_depadded.sam | 2023-08-23 16:20 | 1.6K | ||
ce#supp.sam | 2023-08-23 16:20 | 547 | ||
ce#large_seq.sam | 2023-08-23 16:20 | 2.0M | ||
ce#1000.sam | 2023-08-23 16:20 | 315K | ||
ce#5b_java.cram | 2023-08-23 16:20 | 6.6K | ||
ce#5b.sam | 2023-08-23 16:20 | 1.8K | ||
ce#5.sam | 2023-08-23 16:20 | 1.8K | ||
ce#2.sam | 2023-08-23 16:20 | 645 | ||
ce#1.sam | 2023-08-23 16:20 | 341 | ||
c2.fa.fai | 2023-08-23 16:20 | 12 | ||
c2.fa | 2023-08-23 16:20 | 14 | ||
c2#pad.sam | 2023-08-23 16:20 | 847 | ||
c1.fa.fai | 2023-08-23 16:20 | 14 | ||
c1.fa | 2023-08-23 16:20 | 15 | ||
c1#unknown.sam | 2023-08-23 16:20 | 429 | ||
c1#pad3.sam | 2023-08-23 16:20 | 665 | ||
c1#pad2.sam | 2023-08-23 16:20 | 527 | ||
c1#pad1.sam | 2023-08-23 16:20 | 388 | ||
c1#noseq.sam | 2023-08-23 16:20 | 433 | ||
c1#clip.sam | 2023-08-23 16:20 | 337 | ||
c1#bounds.sam | 2023-08-23 16:20 | 148 | ||
bgziptest.txt.gz.gzi | 2023-08-23 16:20 | 88 | ||
bgziptest.txt.gz | 2023-08-23 16:20 | 181 | ||
bgziptest.txt | 2023-08-23 16:20 | 15 | ||
bcf-sr/ | 2023-08-23 16:20 | - | ||
base_mods/ | 2023-08-23 16:20 | - | ||
auxf.fa.fai | 2023-08-23 16:20 | 18 | ||
auxf.fa | 2023-08-23 16:20 | 29 | ||
auxf#values_java.cram | 2023-08-23 16:20 | 5.0K | ||
auxf#values.sam | 2023-08-23 16:20 | 751 | ||